RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FYTTD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000122068

Ensembl transcript IDs: ENST00000241502.9, ENST00000412924.5, ENST00000424384.2, ENST00000426031.5, ENST00000428738.5, ENST00000494309.5

Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACCACTCCGTCAGAGGTaGCAGGTGGCGGGTCGGTGG +
Preference number: 2 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQPLRQR*QVAGRW
Trigger: CCACCGACCCGCCACCTGCCACCTCTGACGGAGTGG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCAGGTGGCGGGTCGGTaGGGAGGGCCTTTTCTCCCC +
Preference number: 2 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTQVAGR*GGPFLP
Trigger: GGGGAGAAAAGGCCCTCCCCACCGACCCGCCACCTG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAATGATCCGCCCGCCTTaGCCTCCCCAAGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQMIRPP*PPQVLG
Trigger: TCCCAGAACTTGGGGAGGCCAAGGCGGGCGGATCAT...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR CAA 90 bp CAACTTTTCGTTTACACAGATGTGGGACTTCAGTATTGCGCAGGGTaGGGTATATACAAGGGTCCTGGAACCAATCCTCCGTGTATACTG +
Preference number: 2 (lower is better)
Translates to: QLFVYTDVGLQYCAG*GIYKGPGTNPPCIL
Trigger: CAGTATACACGGAGGATTGGTTCCAGGACCCTTGTATATACCCAACCCTGCGCAATACTGAAGTCCCACATCTGTGTAAACGAAAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR GCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTCCGAGATCGCACCATTaGACTCCAACCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAPRSHH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAATGGTGCGATCTCGG...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTAGCAATGAGGCCTGCTaGGCCCGTATACTTTGTGTG +
Preference number: 2 (lower is better)
Translates to: SEYTHKTTFQSQNGITFASNEAC*ARILCV
Trigger: CACACAAAGTATACGGGCCCAGCAGGCCTCATTGCT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTGGACTTTACACCGTCTaGAAGAGGAAGCACGTTCTG +
Preference number: 2 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAGLYTV*KRKHVL
Trigger: CAGAACGTGCTTCCTCTTTCAGACGGTGTAAAGTCC...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTGTGGTCTCGGCTCACTaGAATCTCTGCTTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTVVSAH*NLCFLD
Trigger: ATCCAGGAAGCAGAGATTGCAGTGAGCCGAGACCAC...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAGACCAGGATTTACCATaGCAAAGTCTAAAACACGGG +
Preference number: 2 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQDQDLP*QSLKHG
Trigger: CCCGTGTTTTAGACTTTGTCATGGTAAATCCTGGTC...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTCAAACTTTCATTTGGTaGTGCACGGCACCAATGTTT +
Preference number: 2 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAQTFIW*CTAPMF
Trigger: AAACATTGGTGCCGTGCATCACCAAATGAAAGTTTG...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTATTGGCTTAAACAGTTaGCCCTTCAACAACATGGCT +
Preference number: 2 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAIGLNS*PFNNMA
Trigger: AGCCATGTTGTTGAAGGGCCAACTGTTTAAGCCAAT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACCTATTAAAGGGCAAGTaGCAGCAACCAAGGGACCTA +
Preference number: 2 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNLLKGK*QQPRDL
Trigger: TAGGTCCCTTGGTTGCTGTCACTTGCCCTTTAATAG...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACCGAAACTTAAGAACTaGACAAGGATTACAACCACA +
Preference number: 2 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQPKLKN*TRITTT
Trigger: TGTGGTTGTAATCCTTGTTCAGTTCTTAAGTTTCGG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAATCCTCCGTGTATACTaGGGGATGACTGTAATTAAA +
Preference number: 2 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQILRVY*GMTVIK
Trigger: TTTAATTACAGTCATCCCTCAGTATACACGGAGGAT...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATGCAATCTCTGCTTCCTaGATTCAAGCAATTCTCCCG +
Preference number: 2 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYAISAS*IQAILP
Trigger: CGGGAGAATTGCTTGAATCCAGGAAGCAGAGATTGC...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp AACAGTACATCTATAACCAGGGTTTTGAAGTGTTTCATCTCAACTACCTGTCCTACCTACTCATGTTTATaGAGACCAGGATTTACCATG +
Preference number: 2 (lower is better)
Translates to: NSTSITRVLKCFISTTCPTYSCL*RPGFTM
Trigger: CATGGTAAATCCTGGTCTTCATAAACATGAGTAGGT...AGGACAGGTAGTTGAGATGAAACACTTCAAAACCCTGGTTATAGATGTACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAATTCCACTATTTTCTGTaGGTGTTAATTCACCAAAGC +
Preference number: 2 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQFHYFL*VLIHQS
Trigger: GCTTTGGTGAATTAACACCCACAGAAAATAGTGGAA...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACGCAACTCAAGAAGCATaGGAGACAACAATGAAATCT +
Preference number: 2 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNATQEA*ETTMKS
Trigger: AGATTTCATTGTTGTCTCTCATGCTTCTTGAGTTGC...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR TCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTTGTTGGAGCTACAAATaGAATCATCAAAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTCWSYK*NHQKRE
Trigger: CTCTCTCTTTTGATGATTTCATTTGTAGCTCCAACA...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR GCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATACGGCACCAATGTTTTaGATATACCTTGATGCAAAG +
Preference number: 2 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYTAPMF*IYLDAK
Trigger: CTTTGCATCAAGGTATATGCAAAACATTGGTGCCGT...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACAATCCATGTACACAGTaGGCCAACTTTTCGTTTACA +
Preference number: 2 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNNPCTQ*ANFSFT
Trigger: TGTAAACGAAAAGTTGGCCCACTGTGTACATGGATT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCTTGCAAAAATGTTTTaGAATGAGTTCTTGGCCTAT +
Preference number: 2 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTLAKMF*NEFLAY
Trigger: ATAGGCCAAGAACTCATTGCAAAACATTTTTGCAAG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACACAGTATACAACATCTaGGGACTCAGTACTATCTTA +
Preference number: 2 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNTVYNI*GLSTIL
Trigger: TAAGATAGTACTGAGTCCCCAGATGTTGTATACTGT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR GCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATTCTAACCCAATATTCTaGATTGCAAAGTATACTGGA +
Preference number: 2 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYSNPIF*IAKYTG
Trigger: TCCAGTATACTTTGCAATGCAGAATATTGGGTTAGA...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CAA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATCATGATCCGCCCGCCTaGGCCTCCCCAAGTTCTGGG +
Preference number: 3 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYHDPPA*ASPSSG
Trigger: CCCAGAACTTGGGGAGGCCAAGGCGGGCGGATCATG...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAGATTGGCTTAAACAGTaGGCCCTTCAACAACATGGC +
Preference number: 3 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQDWLKQ*ALQQHG
Trigger: GCCATGTTGTTGAAGGGCCAACTGTTTAAGCCAATC...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAAATACAAACTTTCATTaGGTGATGCACGGCACCAAT +
Preference number: 3 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQNTNFH*VMHGTN
Trigger: ATTGGTGCCGTGCATCACCAAATGAAAGTTTGTATT...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CAA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTTACCTGTCCTTCAACTaGCTACTTACTTCCTCTCAT +
Preference number: 3 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTYLSFN*LLTSSH
Trigger: ATGAGAGGAAGTAAGTAGCAAGTTGAAGGACAGGTA...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR TCA 72 bp ATGCTAAAGCATGGCTATTACCAATTCTTAGGTATTTaGAAACCACACACCATTCCACTATTTTCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: MLKHGYYQFLGI*KPHTIPLFSVG
Trigger: ACCCACAGAAAATAGTGGAATGGTGTGTGGTTTTCAAATACCTAAGAATTGGTAATAGCCATGCTTTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CAA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATCCAATTCTTAGGTATTaGAAAACCACACACCATTCC +
Preference number: 3 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYPILRY*KTTHHS
Trigger: GGAATGGTGTGTGGTTTTCAAATACCTAAGAATTGG...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR-3UTR CAA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACTTTTGCAATGAGTTCTaGGCCTATATGAAAAGCATC +
Preference number: 3 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNFCNEF*AYMKSI
Trigger: GATGCTTTTCATATAGGCCAAGAACTCATTGCAAAA...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR GCA 72 bp AAGTTTCACTCAAATCTTAATAGTTCTTTCCAGCTCTaGATTTCACTATATCATGCAAAGGTTATGTCCTCC +
Preference number: 3 (lower is better)
Translates to: KFHSNLNSSFQL*ISLYHAKVMSS
Trigger: GGAGGACATAACCTTTGCATGATATAGTGAAATGCAGAGCTGGAAAGAACTATTAAGATTTGAGTGAAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR CAA 72 bp GTAATCCCACCTACTTACGAGGCTGAGGGACAAGAATaGCTTGAACCCGGAAAGGATCCTGGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VIPPTYEAEGQE*LEPGKDPGRQR
Trigger: CCTCTGCCTCCCAGGATCCTTTCCGGGTTCAAGCAATTCTTGTCCCTCAGCCTCGTAAGTAGGTGGGATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTGTCAGAGGTGGCAGGTaGCGGGTCGGTGGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTVRGGR*RVGGEG
Trigger: GCCCTCCCCACCGACCCGCCACCTGCCACCTCTGAC...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp AACAGTACATCTATAACCAGGGTTTTGAAGTGTTTCATCTCAACTACCTGTCCTCGAGGTTTTCATTGCTaGGGGCCTTCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: NSTSITRVLKCFISTTCPRGFHC*GPSAAA
Trigger: CGCCGCCGCCGAAGGCCCGCAGCAATGAAAACCTCG...AGGACAGGTAGTTGAGATGAAACACTTCAAAACCCTGGTTATAGATGTACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR CAA 72 bp GTTTACACAGATGTGGGACTTCAGTATTGCGCAGGGTaGGGTATATACAAGGGTCCTGGAACCAATCCTCCG +
Preference number: 4 (lower is better)
Translates to: VYTDVGLQYCAG*GIYKGPGTNPP
Trigger: CGGAGGATTGGTTCCAGGACCCTTGTATATACCCAACCCTGCGCAATACTGAAGTCCCACATCTGTGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACTCACTGCTGAGCAATaGGGCCTGCTGGGCCCGTAT +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQLTAEQ*GLLGPY
Trigger: ATACGGGCCCAGCAGGCCTCATTGCTCAGCAGTGAG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAAGGCAGAGGCTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQRQRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAGCCTCTGCCT...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAATCACCCAGGCTGGAGTaGAATGGCGTGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQSPRLE*NGVVSA
Trigger: AGCCGAGACCACGCCATTGCACTCCAGCCTGGGTGA...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTAAACCGGTTCATGGCTaGAGACGTCGCGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAKPVHG*RRRAES
Trigger: GCTCTCGGCGCGACGTCTCCAGCCATGAACCGGTTT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACCAGGTGGCGGGTCGGTaGGGAGGGCCTTTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNQVAGR*GGPFLP
Trigger: GGGGAGAAAAGGCCCTCCCCACCGACCCGCCACCTG...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATCCACTCCGTCAGAGGTaGCAGGTGGCGGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYPLRQR*QVAGRW
Trigger: CCACCGACCCGCCACCTGCCACCTCTGACGGAGTGG...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAACCCGGAAAGGATCCTaGGAGGCAGAGGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQTRKGS*EAEAAV
Trigger: CACTGCAGCCTCTGCCTCCCAGGATCCTTTCCGGGT...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAATACCAAACCGGTTCATaGCTGGAGACGTCGCGCCGA +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQYQTGS*LETSRR
Trigger: TCGGCGCGACGTCTCCAGCCATGAACCGGTTTGGTA...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACAGGCGGAGGTTGGGGTaGGCCGAGATCGCACCATTG +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNRRRLG*AEIAPL
Trigger: CAATGGTGCGATCTCGGCTCACCCCAACCTCCGCCT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATGCGAAGAAGTCGCCGTaGCTCCCACCAACCGGGTAC +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYAKKSP*LPPTGY
Trigger: GTACCCGGTTGGTGGGAGCCACGGCGACTTCTTCGC...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTATGATCCGCCCGCCTTaGCCTCCCCAAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTMIRPP*PPQVLG
Trigger: TCCCAGAACTTGGGGAGGCCAAGGCGGGCGGATCAT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACACTGCACTGCAGCCTaGGTGACAGAGTATTCCGTC +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQHCTAA*VTEYSV
Trigger: GACGGAATACTCTGTCACCCAGGCTGCAGTGCAGTG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACGGACCTATCCCACGGTaGCAAAGCGGCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNGPIPR*QSGFPL
Trigger: AAGGGGGAAGCCGCTTTGTCACCGTGGGATAGGTCC...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTGACAGGAAAATCGCTTaGACCCGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTDRKIA*TREAEA
Trigger: AGCCTCTGCCTCCCGGGTTCAAGCGATTTTCCTGTC...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACTGTCGAGGTTTTCATTaGTGCGGGCCTTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNCRGFH*CGPSAA
Trigger: CGCCGCCGAAGGCCCGCAGCAATGAAAACCTCGACA...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTGTGGTCTCGGCTCACTaGAATCTCTGCTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAVVSAH*NLCFLD
Trigger: ATCCAGGAAGCAGAGATTGCAGTGAGCCGAGACCAC...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTAGCCAAGATCACTACTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFASQDHY*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAGTAGTGATCTTGGCT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTTCCCTCCATTTGTGGTaGAAGTCCGCCATTGACGAG +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFASLHLW*KSAIDE
Trigger: CTCGTCAATGGCGGACTTCCACCACAAATGGAGGGA...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAGGACTTTACACCGTCTaGAAGAGGAAGCACGTTCTG +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQGLYTV*KRKHVL
Trigger: CAGAACGTGCTTCCTCTTTCAGACGGTGTAAAGTCC...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTACTCTCATCCTGAATTaGTGGGCACCACTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFATLILN*WAPLCW
Trigger: CCAGCAAAGTGGTGCCCAGCAATTCAGGATGAGAGT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCCGAGATCGCACCATTaGACTCCAACCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTPRSHH*TPTWAT
Trigger: TGTTGCCCAGGTTGGAGTGCAATGGTGCGATCTCGG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATGCACTGCAGCCTGGGTaGCAGAGTATTCCGTCTCAA +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYALQPG*QSIPSQ
Trigger: TTGAGACGGAATACTCTGTCACCCAGGCTGCAGTGC...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACAGGCAGAGGCTGCAGTaGGCCAAGATCACTACTGCA +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNRQRLQ*AKITTA
Trigger: TGCAGTAGTGATCTTGGCTCACTGCAGCCTCTGCCT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAATGCTGGGCACCACTTTaGTGGAGGAGTCTTCTATTT +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQCWAPL*WRSLLF
Trigger: AAATAGAAGACTCCTCCAGCAAAGTGGTGCCCAGCA...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCTGAGCAATGAGGCCTaGTGGGCCCGTATACTTTGT +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTLSNEA*WARILC
Trigger: ACAAAGTATACGGGCCCAGCAGGCCTCATTGCTCAG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTAAATCCCTCCATTTGTaGTGGAAGTCCGCCATTGAC +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAKSLHL*WKSAID
Trigger: GTCAATGGCGGACTTCCACCACAAATGGAGGGATTT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTGCAATCTCTGCTTCCTaGATTCAAGCAATTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAAISAS*IQAILP
Trigger: CGGGAGAATTGCTTGAATCCAGGAAGCAGAGATTGC...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTAGCAATGAGGCCTGCTaGGCCCGTATACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTSNEAC*ARILCV
Trigger: CACACAAAGTATACGGGCCCAGCAGGCCTCATTGCT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTGTAATCCCAGCACTTTaGGAGTCAGAGGCGGGCATA +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTVIPAL*ESEAGI
Trigger: TATGCCCGCCTCTGACTCCCAAAGTGCTGGGATTAC...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp AACAGTACATCTATAACCAGGGTTTTGAAGTGTTTCATCTCAACTACCTGTCCTCTATTAAAGGGCAAGTaGCAGCAACCAAGGGACCTA +
Preference number: 4 (lower is better)
Translates to: NSTSITRVLKCFISTTCPLLKGK*QQPRDL
Trigger: TAGGTCCCTTGGTTGCTGTCACTTGCCCTTTAATAG...AGGACAGGTAGTTGAGATGAAACACTTCAAAACCCTGGTTATAGATGTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATGTATTCAACTGGGCCTaGACCTTCAGGCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYVFNWA*TFRPLL
Trigger: CAGAAGAGGCCTGAAGGTGCAGGCCCAGTTGAATAC...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTTGTTCTGTATTCAACTaGGCCTGCACCTTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTCSVFN*ACTFRP
Trigger: AGGCCTGAAGGTGCAGGCCCAGTTGAATACAGAACA...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTTCGTTTACACAGATGTaGGACTTCAGTATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFASFTQM*DFSIAQ
Trigger: CTGCGCAATACTGAAGTCCCACATCTGTGTAAACGA...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAAAATGCAAAATTAACTaGGCATGGTGGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQKCKIN*AWWWAP
Trigger: AGGTGCCCACCACCATGCCCAGTTAATTTTGCATTT...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATATCGCACTCTCATCCTaGATTGCTGGGCACCACTTT +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYIALSS*IAGHHF
Trigger: AAAGTGGTGCCCAGCAATTCAGGATGAGAGTGCGAT...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAATTGGCTTAAACAGTTaGCCCTTCAACAACATGGCT +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQIGLNS*PFNNMA
Trigger: AGCCATGTTGTTGAAGGGCCAACTGTTTAAGCCAAT...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTGACCAGGATTTACCATaGCAAAGTCTAAAACACGGG +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTDQDLP*QSLKHG
Trigger: CCCGTGTTTTAGACTTTGTCATGGTAAATCCTGGTC...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp AACAGTACATCTATAACCAGGGTTTTGAAGTGTTTCATCTCAACTACCTGTCCTGCCTGGCCAACATGGTaGAAACTCATTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NSTSITRVLKCFISTTCPAWPTW*KLISTK
Trigger: TTTAGTAGAAATGAGTTTTCACCATGTTGGCCAGGC...AGGACAGGTAGTTGAGATGAAACACTTCAAAACCCTGGTTATAGATGTACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTGAATGGCATCACATTTaGTTGTGTTATCAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAEWHHI*LCYQAS
Trigger: GGAAGCTTGATAACACAAGCAAATGTGATGCCATTC...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATAAAGTTCCTTTGACATaGGACCTATCCCACGGTGAC +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYKVPLT*DLSHGD
Trigger: GTCACCGTGGGATAGGTCCCATGTCAAAGGAACTTT...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTCTTGTAACGTACAGCTaGAAGATTTTGCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFALVTYS*KILLHL
Trigger: CAAATGCAGCAAAATCTTCCAGCTGTACGTTACAAG...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATGTTAATCGTGGTTTCTaGGTTACTGGGCATTGCACT +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYVNRGF*VTGHCT
Trigger: AGTGCAATGCCCAGTAACTCAGAAACCACGATTAAC...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTTGTTGGAGCTACAAATaGAATCATCAAAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFACWSYK*NHQKRE
Trigger: CTCTCTCTTTTGATGATTTCATTTGTAGCTCCAACA...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTGGTATTCATTTTCTGTaGTGCCAAGTGAGCTATTTT +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFAGIHFL*CQVSYF
Trigger: AAAATAGCTCACTTGGCAGCACAGAAAATGAATACC...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACATTTCACTATATCATaGAAAGGTTATGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQHFTIS*KGYVLP
Trigger: AGGGAGGACATAACCTTTGCATGATATAGTGAAATG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACTGGGCACCACTTTGCTaGAGGAGTCTTCTATTTAGT +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNWAPLC*RSLLFS
Trigger: ACTAAATAGAAGACTCCTCCAGCAAAGTGGTGCCCA...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTACAGTATTTTACGATTaGCTTAAACAGTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: SEYTHKTTFQSQNGITFATVFYD*LKQLAL
Trigger: AAGGGCCAACTGTTTAAGCCAATCGTAAAATACTGT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACAACAAAAATTATTCTaGGCCCGTATACTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQQQKLF*ARILCV
Trigger: CACACAAAGTATACGGGCCCAGAATAATTTTTGTTG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR CAA 72 bp ATAAGACGACATTTCAGTCCCAGAATGGCATCACATTaGCTTGTGTTATCAAGCTTCCTGTTAAACATAGGT +
Preference number: 4 (lower is better)
Translates to: IRRHFSPRMASH*LVLSSFLLNIG
Trigger: ACCTATGTTTAACAGGAAGCTTGATAACACAAGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTACCTACTCATGTTTATaGAGACCAGGATTTACCATG +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTTYSCL*RPGFTM
Trigger: CATGGTAAATCCTGGTCTTCATAAACATGAGTAGGT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACCAAACTTTCATTTGGTaGTGCACGGCACCAATGTTT +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNQTFIW*CTAPMF
Trigger: AAACATTGGTGCCGTGCATCACCAAATGAAAGTTTG...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACAAATCTAGTATACAATaGAGGGCAGGCCAAGAACGA +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNKSSIQ*RAGQER
Trigger: TCGTTCTTGGCCTGCCCTGCATTGTATACTAGATTT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTACGGCACCAATGTTTTaGATATACCTTGATGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTTAPMF*IYLDAK
Trigger: CTTTGCATCAAGGTATATGCAAAACATTGGTGCCGT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTATTTCAGTCCCAGAATaGCATCACATTTGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTISVPE*HHICLC
Trigger: ACACAAGCAAATGTGATGCCATTCTGGGACTGAAAT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR CAA 72 bp AATGCTAAAGCATGGCTATTACCAATTCTTAGGTATTaGAAAACCACACACCATTCCACTATTTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NAKAWLLPILRY*KTTHHSTIFCG
Trigger: CCCACAGAAAATAGTGGAATGGTGTGTGGTTTTCAAATACCTAAGAATTGGTAATAGCCATGCTTTAGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR CAA 72 bp ATTGGCTTAAACAGTTGGCCCTTCAACAACATGGCTTaGAATTACCTGGGTCTACTTATAAGCAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: IGLNSWPFNNMA*NYLGLLISKLF
Trigger: AAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTGAAGGGCCAACTGTTTAAGCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATGCAACTCAAGAAGCATaGGAGACAACAATGAAATCT +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYATQEA*ETTMKS
Trigger: AGATTTCATTGTTGTCTCTCATGCTTCTTGAGTTGC...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACCCGAAACTTAAGAACTaGACAAGGATTACAACCACA +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNPKLKN*TRITTT
Trigger: TGTGGTTGTAATCCTTGTTCAGTTCTTAAGTTTCGG...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCAATTCTTAGGTATTTaGAAACCACACACCATTCCA +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTQFLGI*KPHTIP
Trigger: TGGAATGGTGTGTGGTTTTCAAATACCTAAGAATTG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR TCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACATCCTCCGTGTATACTaGGGGATGACTGTAATTAAA +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNILRVY*GMTVIK
Trigger: TTTAATTACAGTCATCCCTCAGTATACACGGAGGAT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTAGTTCTTTCCAGCTCTaGATTTCACTATATCATGCA +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTSSFQL*ISLYHA
Trigger: TGCATGATATAGTGAAATGCAGAGCTGGAAAGAACT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATAAAATTAGTTGGCTGTaGTGGCTCAAGCTTGTAATC +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYKISWL*WLKLVI
Trigger: GATTACAAGCTTGAGCCACCACAGCCAACTAATTTT...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACAACACAAAAATTAGTTaGCTGTGGTGGCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNNTKIS*LWWLKL
Trigger: AAGCTTGAGCCACCACAGCCAACTAATTTTTGTGTT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATGTAATCCCAGATACTTaGAAGGTTGAGACAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYVIPDT*KVETGK
Trigger: TTTTCCTGTCTCAACCTTCCAAGTATCTGGGATTAC...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTAGTAGAAACATATCATaGTCACTCCTTCTAAGACTC +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTSRNIS*SLLLRL
Trigger: GAGTCTTAGAAGGAGTGACCATGATATGTTTCTACT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATTTCTTGACGTCACTTTaGTCCCGCTTTGTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYFLTSL*SRFVKN
Trigger: ATTTTTAACAAAGCGGGAGCAAAGTGACGTCAAGAA...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCCCAATATTCTGCATTaGAAAGTATACTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTPNILH*KVYWIL
Trigger: AAGAATCCAGTATACTTTGCAATGCAGAATATTGGG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTTCTAACCCAATATTCTaGATTGCAAAGTATACTGGA +
Preference number: 4 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTSNPIF*IAKYTG
Trigger: TCCAGTATACTTTGCAATGCAGAATATTGGGTTAGA...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATTTCCACTATTTTCTGTaGGTGTTAATTCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYFHYFL*VLIHQS
Trigger: GCTTTGGTGAATTAACACCCACAGAAAATAGTGGAA...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
3UTR CAA 72 bp GATGCTAATAGAAGAGTCTACAGTGATTTACCAATTTaGCTAGTAGATAAGGTTTCACACCCTAAAAACTAC +
Preference number: 4 (lower is better)
Translates to: DANRRVYSDLPI*LVDKVSHPKNY
Trigger: GTAGTTTTTAGGGTGTGAAACCTTATCTACTAGCAAAATTGGTAAATCACTGTAGACTCTTCTATTAGCATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR GCA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATCTTGCAAAAATGTTTTaGAATGAGTTCTTGGCCTAT +
Preference number: 4 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYLAKMF*NEFLAY
Trigger: ATAGGCCAAGAACTCATTGCAAAACATTTTTGCAAG...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS GCA 90 bp ACGCCCGGGTCCCTCGCGGTCCAGCCGGGCACCTGGCGTCGAGCCTaGGCTCCCGGCTGTCCTCCGGGCCTCCGCTCGGGTCCGCCCACC +
Preference number: 5 (lower is better)
Translates to: TPGSLAVQPGTWRRA*APGCPPGLRSGPPT
Trigger: GGTGGGCGGACCCGAGCGGAGGCCCGGAGGACAGCCGGGAGCGCAGGCTCGACGCCAGGTGCCCGGCTGGACCGCGAGGGACCCGGGCGT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426031.5
CDS CCA 90 bp CGCCGGCCTGGAACGCCCGGCGACCAGGGAAAGCTCCGGAAGCGCTaGTTTAACCGACCGCAGCCCCGGCCGGGCTCTCCAAGACCTTTC +
Preference number: 5 (lower is better)
Translates to: RRPGTPGDQGKLRKR*FNRPQPRPGSPRPF
Trigger: GAAAGGTCTTGGAGAGCCCGGCCGGGGCTGCGGTCGGTTAAACCAGCGCTTCCGGAGCTTTCCCTGGTCGCCGGGCGTTCCAGGCCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424384.2
CDS GCA 90 bp AGGCAGCGCTCAATACACAACCACATCCCACAGGCGGCCGAGCGCTaGTTCCTTTCTGACAGACGCTCCGGGGCCGCGGCCGGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: RQRSIHNHIPQAAER*FLSDRRSGAAAGGG
Trigger: GCCACCTCCGGCCGCGGCCCCGGAGCGTCTGTCAGAAAGGAAGCAGCGCTCGGCCGCCTGTGGGATGTGGTTGTGTATTGAGCGCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424384.2
CDS-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACATGATCCGCCCGCCTaGGCCTCCCCAAGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQHDPPA*ASPSSG
Trigger: CCCAGAACTTGGGGAGGCCAAGGCGGGCGGATCATG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS CCA 90 bp CTTCAAAGATGTTTGCTTTCTCCCCCATTAGCTAGCTCTGAGGCCTaGAGAGGGAGACTGTGCTTTTCTAGGCAGCGCTCAATACACAAC +
Preference number: 5 (lower is better)
Translates to: LQRCLLSPPLASSEA*RGRLCFSRQRSIHN
Trigger: GTTGTGTATTGAGCGCTGCCTAGAAAAGCACAGTCTCCCTCTCCAGGCCTCAGAGCTAGCTAATGGGGGAGAAAGCAAACATCTTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424384.2
CDS-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAATTGTCGAGGTTTTCATaGCTGCGGGCCTTCGGCGGC +
Preference number: 5 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQLSRFS*LRAFGG
Trigger: GCCGCCGAAGGCCCGCAGCAATGAAAACCTCGACAA...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAAGCCGAGATCGCACCATaGCACTCCAACCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQAEIAP*HSNLGN
Trigger: GTTGCCCAGGTTGGAGTGCAATGGTGCGATCTCGGC...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTAGACAGGAAAATCGCTaGAACCCGGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SEYTHKTTFQSQNGITFARQENR*NPGGRG
Trigger: GCCTCTGCCTCCCGGGTTCAAGCGATTTTCCTGTCT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp AACAGTACATCTATAACCAGGGTTTTGAAGTGTTTCATCTCAACTACCTGTCCTGGTGGAAGTCCGCCATaGACGAGTTCTCTTTGCTAC +
Preference number: 5 (lower is better)
Translates to: NSTSITRVLKCFISTTCPGGSPP*TSSLCY
Trigger: GTAGCAAAGAGAACTCGTCAATGGCGGACTTCCACC...AGGACAGGTAGTTGAGATGAAACACTTCAAAACCCTGGTTATAGATGTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCACTCTCATCCTGAATaGCTGGGCACCACTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTHSHPE*LGTTLL
Trigger: CAGCAAAGTGGTGCCCAGCAATTCAGGATGAGAGTG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTAGCTGGCTAGGTCTCTaGAGAACTGCTACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTSWLGL*RTATGF
Trigger: GAAACCAGTAGCAGTTCTCAAGAGACCTAGCCAGCT...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCCTTTAGGAACTTTCTaGACGTCACTTTGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTPLGTF*TSLCSR
Trigger: GCGGGAGCAAAGTGACGTCAAGAAAGTTCCTAAAGG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp AACAGTACATCTATAACCAGGGTTTTGAAGTGTTTCATCTCAACTACCTGTCCTGATTGGCTTAAACAGTaGGCCCTTCAACAACATGGC +
Preference number: 5 (lower is better)
Translates to: NSTSITRVLKCFISTTCPDWLKQ*ALQQHG
Trigger: GCCATGTTGTTGAAGGGCCAACTGTTTAAGCCAATC...AGGACAGGTAGTTGAGATGAAACACTTCAAAACCCTGGTTATAGATGTACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACAGATACTTGGAAGGTaGAGACAGGAAAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQQILGR*RQENRL
Trigger: CAAGCGATTTTCCTGTCTCAACCTTCCAAGTATCTG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS TCA 90 bp AAGTGCTGGGATTACAAGCACGAACCTCTTCATATGCTTAACAATTaGGGACTCCAAAGTTTTTGTGTCAGAATTCTGTTGGATTCCCCA +
Preference number: 5 (lower is better)
Translates to: KCWDYKHEPLHMLNN*GLQSFCVRILLDSP
Trigger: TGGGGAATCCAACAGAATTCTGACACAAAAACTTTGGAGTCCTCAATTGTTAAGCATATGAAGAGGTTCGTGCTTGTAATCCCAGCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412924.5
ENST00000494309.5
CDS-3UTR CAA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACTTGCTGGGCACCACTTaGCTGGAGGAGTCTTCTATT +
Preference number: 5 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNLLGTT*LEESSI
Trigger: AATAGAAGACTCCTCCAGCAAAGTGGTGCCCAGCAA...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GGATTAGTCTCTAAAGGCTCATCTAACCCAATATTCTGCATTGCAAAGTATACTCACTCAAAAGTTCCTTaGACATGGGACCTATCCCAC +
Preference number: 5 (lower is better)
Translates to: GLVSKGSSNPIFCIAKYTHSKVP*TWDLSH
Trigger: GTGGGATAGGTCCCATGTCAAAGGAACTTTTGAGTG...AGTATACTTTGCAATGCAGAATATTGGGTTAGATGAGCCTTTAGAGACTAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATCCTGAGGTCAGGAGTTaGAGACTAGACTGGCCAATA +
Preference number: 5 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYPEVRS*RLDWPI
Trigger: TATTGGCCAGTCTAGTCTCAAACTCCTGACCTCAGG...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATTCAAAATCCCTCCATTaGTGGTGGAAGTCCGCCATT +
Preference number: 5 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYSKSLH*WWKSAI
Trigger: AATGGCGGACTTCCACCACAAATGGAGGGATTTTGA...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp TCTGAATACACTCATAAGACGACATTTCAGTCCCAGAATGGCATCACATTTGCTAATACAAACTTTCATTaGGTGATGCACGGCACCAAT +
Preference number: 5 (lower is better)
Translates to: SEYTHKTTFQSQNGITFANTNFH*VMHGTN
Trigger: ATTGGTGCCGTGCATCACCAAATGAAAGTTTGTATT...AGCAAATGTGATGCCATTCTGGGACTGAAATGTCGTCTTATGAGTGTATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAACCAATTCTTAGGTATTaGAAAACCACACACCATTCC +
Preference number: 5 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQPILRY*KTTHHS
Trigger: GGAATGGTGTGTGGTTTTCAAATACCTAAGAATTGG...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAATTCAACAACATGGCTTaGAATTACCTGGGTCTACTT +
Preference number: 5 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQFNNMA*NYLGLL
Trigger: AAGTAGACCCAGGTAATTCAAAGCCATGTTGTTGAA...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp GAACCCTCTCTAAAGGGAAGTTTTACATGCTTAACTGCTTTTTCACAGTGGCAATTTTGCAATGAGTTCTaGGCCTATATGAAAAGCATC +
Preference number: 5 (lower is better)
Translates to: EPSLKGSFTCLTAFSQWQFCNEF*AYMKSI
Trigger: GATGCTTTTCATATAGGCCAAGAACTCATTGCAAAA...TTGCCACTGTGAAAAAGCAGTTAAGCATGTAAAACTTCCCTTTAGAGAGGGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACAGAATGGCATCACATTaGCTTGTGTTATCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNRMASH*LVLSSF
Trigger: GAAGCTTGATAACACAAGCAAATGTGATGCCATTCT...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp CAACAACATGGCTTTGAATTACCTGGGTCTACTTATAAGCAAATTGTTTTGAACTATTGTTCTATATTCTaGTCACTTAGAGGTGGACGA +
Preference number: 5 (lower is better)
Translates to: QQHGFELPGSTYKQIVLNYCSIF*SLRGGR
Trigger: TCGTCCACCTCTAAGTGACAAGAATATAGAACAATA...GTTCAAAACAATTTGCTTATAAGTAGACCCAGGTAATTCAAAGCCATGTTGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS-3UTR CAA 90 bp CACTGGACTTTTCTAACAGGTCTACCTAACCCAAATAGCAAAGTAATAAAGTATTACAGGCATTCATCCTaGCAAAAATGTTTTGCAATG +
Preference number: 5 (lower is better)
Translates to: HWTFLTGLPNPNSKVIKYYRHSS*QKCFAM
Trigger: CATTGCAAAACATTTTTGCAAGGATGAATGCCTGTA...ATACTTTATTACTTTGCTATTTGGGTTAGGTAGACCTGTTAGAAAAGTCCAGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241502.9
CDS CCA 72 bp GAGAGTCGCGCCCGGCAGCCATGGCCGGCGCCGGCCTaGAACGCCCGGCGACCAGGGAAAGCTCCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: ESRARQPWPAPA*NARRPGKAPEA
Trigger: CGCTTCCGGAGCTTTCCCTGGTCGCCGGGCGTTCCAGGCCGGCGCCGGCCATGGCTGCCGGGCGCGACTCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424384.2
CDS CCA 72 bp GGAACGCCCGGCGACCAGGGAAAGCTCCGGAAGCGCTaGTTTAACCGACCGCAGCCCCGGCCGGGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: GTPGDQGKLRKR*FNRPQPRPGSP
Trigger: TGGAGAGCCCGGCCGGGGCTGCGGTCGGTTAAACCAGCGCTTCCGGAGCTTTCCCTGGTCGCCGGGCGTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424384.2
CDS GCA 72 bp TCAATACACAACCACATCCCACAGGCGGCCGAGCGCTaGTTCCTTTCTGACAGACGCTCCGGGGCCGCGGCC +
Preference number: 6 (lower is better)
Translates to: SIHNHIPQAAER*FLSDRRSGAAA
Trigger: GGCCGCGGCCCCGGAGCGTCTGTCAGAAAGGAAGCAGCGCTCGGCCGCCTGTGGGATGTGGTTGTGTATTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424384.2
CDS GCA 72 bp CCATTAGCTAGCTCTGAGGCCTGGAGAGGGAGACTGTaGTTTTCTAGGCAGCGCTCAATACACAACCACATC +
Preference number: 6 (lower is better)
Translates to: PLASSEAWRGRL*FSRQRSIHNHI
Trigger: GATGTGGTTGTGTATTGAGCGCTGCCTAGAAAAGCACAGTCTCCCTCTCCAGGCCTCAGAGCTAGCTAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424384.2
CDS CAA 72 bp CAACTTGATGATATCATCGGGATTAGATTAGCGTTATaGCCTAGTCTACATCTCGGACTGAGTTCGGTCCCC +
Preference number: 6 (lower is better)
Translates to: QLDDIIGIRLAL*PSLHLGLSSVP
Trigger: GGGGACCGAACTCAGTCCGAGATGTAGACTAGGCAATAACGCTAATCTAATCCCGATGATATCATCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428738.5
CDS GCA 72 bp CAAAGTGCTGGGATTACAAGCACGAACCTCTTCATATaGTTAACAATTGAGGACTCCAAAGTTTTTGTGTCA +
Preference number: 6 (lower is better)
Translates to: QSAGITSTNLFI*LTIEDSKVFVS
Trigger: TGACACAAAAACTTTGGAGTCCTCAATTGTTAAGCATATGAAGAGGTTCGTGCTTGTAATCCCAGCACTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412924.5
ENST00000494309.5
CDS TCA 72 bp GATTACAAGCACGAACCTCTTCATATGCTTAACAATTaGGGACTCCAAAGTTTTTGTGTCAGAATTCTGTTG +
Preference number: 6 (lower is better)
Translates to: DYKHEPLHMLNN*GLQSFCVRILL
Trigger: CAACAGAATTCTGACACAAAAACTTTGGAGTCCTCAATTGTTAAGCATATGAAGAGGTTCGTGCTTGTAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412924.5
ENST00000494309.5