RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FYCO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163820

Ensembl transcript IDs: ENST00000296137.7, ENST00000433878.5, ENST00000438446.1, ENST00000471739.1, ENST00000535325.5

Found 1488 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGATTCACAGGGCATGGCCAGTGCACCCAGCTCAGTCTCCAACATaGAGGGCCCTGGTGGGGCAGGGCAGAAAATCTCTCCACAGGCAG +
Preference number: 1 (lower is better)
Translates to: RIHRAWPVHPAQSPT*RALVGQGRKSLHRQ
Trigger: CTGCCTGTGGAGAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGCTGGGTGCACTGGCCATGCCCTGTGAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp GGGCATGGCCAGTGCACCCAGCTCAGTCTCCAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAATCTCTCCACAGGCAGAAGTTGGAAT +
Preference number: 1 (lower is better)
Translates to: GHGQCTQLSLQHAGP*WGRAENLSTGRSWN
Trigger: ATTCCAACTTCTGCCTGTGGAGAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGCTGGGTGCACTGGCCATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp GCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTaGGGATTCACAGGGCATGGCCAGTGCACCCAGCTCAGTCTCCAA +
Preference number: 1 (lower is better)
Translates to: AVYLLFPGVPEGVTA*GFTGHGQCTQLSLQ
Trigger: TTGGAGACTGAGCTGGGTGCACTGGCCATGCCCTGTGAATCCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp ACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGGATTCACAGGGCATGGCCAGTGCAC +
Preference number: 1 (lower is better)
Translates to: TDSHDGCVPPFPRST*GRHSLRIHRAWPVH
Trigger: GTGCACTGGCCATGCCCTGTGAATCCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp CATGGCCAGTGCACCCAGCTCAGTCTCCAACATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTCTCCACAGGCAGAAGTTGGAATCAC +
Preference number: 1 (lower is better)
Translates to: HGQCTQLSLQHAGPW*GRAENLSTGRSWNH
Trigger: GTGATTCCAACTTCTGCCTGTGGAGAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGCTGGGTGCACTGGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 90 bp CAGAGCCTTGGCCAGGAGAAGATGATTGAGCACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAAGGAAGCCGAATGCAAGAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: QSLGQEKMIEHLMAF*QKRLLQGSRMQEAQ
Trigger: CTGGGCCTCTTGCATTCGGCTTCCTTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTGCTCAATCATCTTCTCCTGGCCAAGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp GGGAAGTGGGCAAATGGGCTGTTGGGGAACCTGTCAGGAGGGGAGTaGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTG +
Preference number: 1 (lower is better)
Translates to: GKWANGLLGNLSGGE*GPGIHHASVYSVTL
Trigger: CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCACTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp ACGTGGCATGCCTGTGAGGACAAACATCAGGCCAAGAAGAGTCGCTaGGGGCCTGGCCACCTCTATTCCAGTACTAAGCATGGTCAGAGC +
Preference number: 1 (lower is better)
Translates to: TWHACEDKHQAKKSR*GPGHLYSSTKHGQS
Trigger: GCTCTGACCATGCTTAGTACTGGAATAGAGGTGGCCAGGCCCCCAGCGACTCTTCTTGGCCTGATGTTTGTCCTCACAGGCATGCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp GCAGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCCTGTAGCCAACTGTGCTCCCAGGAG +
Preference number: 1 (lower is better)
Translates to: AENLSTGRSWNHPCP*NSPQEACSQLCSQE
Trigger: CTCCTGGGAGCACAGTTGGCTACAGGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp CACCCATGGAAGAACCTGGGGCCTGACTGCAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTGTTGTTG +
Preference number: 1 (lower is better)
Translates to: HPWKNLGPDCRQLVP*TRDEELSKVSYLLL
Trigger: CAACAACAGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 90 bp AGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTaGTGTGGAGTGACATGTTCAGGAAGGACCTCAGATGGAATGTCC +
Preference number: 1 (lower is better)
Translates to: SSPGGVVLGKLQPVL*CGVTCSGRTSDGMS
Trigger: GGACATTCCATCTGAGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp ACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTaGCTGCAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTC +
Preference number: 1 (lower is better)
Translates to: TFCQMLCSPMEEPGA*LQAAGSMNKGRRAV
Trigger: GACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp AACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGCTGGTTCCATGAACAAGGGACGAAG +
Preference number: 1 (lower is better)
Translates to: NWDLLSDALFTHGRT*GLTAGSWFHEQGTK
Trigger: CTTCGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp TGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTaGGGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAAC +
Preference number: 1 (lower is better)
Translates to: CLCLLLVQSTWNPVC*GQALCRVHLDLEDN
Trigger: GTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp GAGGCTGCTCCAAGGAAGCCGAATGCAAGAGGCCCAGCTTTTCTCTaGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTT +
Preference number: 1 (lower is better)
Translates to: EAAPRKPNARGPAFL*ATSLKGSIPCSPCL
Trigger: AAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAAAGCTGGGCCTCTTGCATTCGGCTTCCTTGGAGCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp ACCGGTCCTCTGCTGTGGAGTGACATGTTCAGGAAGGACCTCAGATaGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGT +
Preference number: 1 (lower is better)
Translates to: TGPLLWSDMFRKDLR*NVPGPKPISYSVNG
Trigger: ACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 90 bp TTATTTGAGGACAGAATCACCCAGACAAAAGGGCCAGAAAGAGAGTaGAGCTTAGAGGCCCCTCCAACACTGCTGAGTTCTGGAGCAGCC +
Preference number: 1 (lower is better)
Translates to: LFEDRITQTKGPERE*SLEAPPTLLSSGAA
Trigger: GGCTGCTCCAGAACTCAGCAGTGTTGGAGGGGCCTCTAAGCTGCACTCTCTTTCTGGCCCTTTTGTCTGGGTGATTCTGTCCTCAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 90 bp GTGGGCCATCAGCTGAGGAGTAGCTCTAAAGCCAATGCACAATCCTaGTCTGTGGTCACAACATCCACACTGGCTGGCATTTGGGCATTA +
Preference number: 1 (lower is better)
Translates to: VGHQLRSSSKANAQS*SVVTTSTLAGIWAL
Trigger: TAATGCCCAAATGCCAGCCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTGCATTGGCTTTAGAGCTACTCCTCAGCTGATGGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp GCACAATCCTGCTCTGTGGTCACAACATCCACACTGGCTGGCATTTaGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGT +
Preference number: 1 (lower is better)
Translates to: AQSCSVVTTSTLAGI*ALDVVYTQPLQAPS
Trigger: ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp CCAAACCCTGTGGAGTTTTTCAGTTCCCGTGTCTTTGCCTGCTCTTaGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCT +
Preference number: 1 (lower is better)
Translates to: PNPVEFFSSRVFACS*SSPPGIQCVEVKHS
Trigger: AGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGAACTGAAAAACTCCACAGGGTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp AGCCAATGCACAATCCTGCTCTGTGGTCACAACATCCACACTGGCTaGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGC +
Preference number: 1 (lower is better)
Translates to: SQCTILLCGHNIHTG*HLGIRCSVHTAIAG
Trigger: GCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTGCATTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp ATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGACCTaGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGT +
Preference number: 1 (lower is better)
Translates to: IQCVEVKHSVESTWT*RTTLCAKRASLFVG
Trigger: ACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp CCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTaGACCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTT +
Preference number: 1 (lower is better)
Translates to: PGIQCVEVKHSVEST*TWRTTLCAKRASLF
Trigger: AAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 90 bp TATTCTCCAAACCCTGTGGAGTTTTTCAGTTCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAG +
Preference number: 1 (lower is better)
Translates to: YSPNPVEFFSSRVFA*SWSSPPGIQCVEVK
Trigger: CTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGAACTGAAAAACTCCACAGGGTTTGGAGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp GGACCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTaGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGT +
Preference number: 1 (lower is better)
Translates to: GPGGQHFVPNVPPCL*VSESDRGWHVLEGG
Trigger: ACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp AGGCCCCAAGTACAGTGGGTTTTGCTCTTGGATTATCTTTACTTCTaGTTCTTAGGGCAATGCTTTGAGCTGTGGAGAGGTCTGGCTGAG +
Preference number: 1 (lower is better)
Translates to: RPQVQWVLLLDYLYF*FLGQCFELWRGLAE
Trigger: CTCAGCCAGACCTCTCCACAGCTCAAAGCATTGCCCTAAGAATCAGAAGTAAAGATAATCCAAGAGCAAAACCCACTGTACTTGGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp ATTAGCTACTCAGTGAATGGTGGTTCTTGTTGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTAT +
Preference number: 1 (lower is better)
Translates to: ISYSVNGGSCCIWCQ*HFRRSSAWPESPQY
Trigger: ATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACCATATGCAACAAGAACCACCATTCACTGAGTAGCTAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp TCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCAGTaGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACT +
Preference number: 1 (lower is better)
Translates to: SDRGWHVLEGGEWLQ*HDEEGIWYRYEDVT
Trigger: AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp TGGGGCAGAAGCTCTTATTTATATAAACAAAAGTGGGCCATCAGCTaGGGAGTAGCTCTAAAGCCAATGCACAATCCTGCTCTGTGGTCA +
Preference number: 1 (lower is better)
Translates to: WGRSSYLYKQKWAIS*GVALKPMHNPALWS
Trigger: TGACCACAGAGCAGGATTGTGCATTGGCTTTAGAGCTACTCCTCAGCTGATGGCCCACTTTTGTTTATATAAATAAGAGCTTCTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp ATGGTCTTTGTGTACATGACCATCCTTGGTTCTAAGCATCACGAATaGCTTCTCTCTGCTTTAATTCCCAACACCTCTGAGCCAAGGACA +
Preference number: 1 (lower is better)
Translates to: MVFVYMTILGSKHHE*LLSALIPNTSEPRT
Trigger: TGTCCTTGGCTCAGAGGTGTTGGGAATTAAAGCAGAGAGAAGCCATTCGTGATGCTTAGAACCAAGGATGGTCATGTACACAAAGACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp GTGTTTTGTAAACAAGAATGGCCGTCTCGATGGTCTTTGTGTACATaGCCATCCTTGGTTCTAAGCATCACGAATGGCTTCTCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: VFCKQEWPSRWSLCT*PSLVLSITNGFSLL
Trigger: AAGCAGAGAGAAGCCATTCGTGATGCTTAGAACCAAGGATGGTCATGTACACAAAGACCATCGAGACGGCCATTCTTGTTTACAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp ATTTCTAGTGTAATTCAGTCTAGCCAGGGCTACCACCTGCAGCAGTaGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCAGTCC +
Preference number: 1 (lower is better)
Translates to: ISSVIQSSQGYHLQQ*FFNCYLHFFKVPQS
Trigger: GGACTGGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGTAGCCCTGGCTAGACTGAATTACACTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR TCA 90 bp ATTTCATCAGTGGACATCCAACCATATCATAAAACACAGGCTCTGTaGTTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAA +
Preference number: 1 (lower is better)
Translates to: ISSVDIQPYHKTQAL*FHPQLAISFHLGLK
Trigger: TTTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGATGTCCACTGATGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 90 bp CCACATGAATTGAGGATTAATCAATTAAAGTGCAATTCCAAATGTTaGGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGA +
Preference number: 1 (lower is better)
Translates to: PHELRINQLKCNSKC*AFQMRLGYCSAATR
Trigger: TCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACATTTGGAATTGCACTTTAATTGATTAATCCTCAATTCATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 90 bp GTGGTTCTAATCCTGGCTATGATCATTAGTAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTATATAAACAAAAGTGGGCCATCAGC +
Preference number: 1 (lower is better)
Translates to: VVLILAMIISKHVCR*GRSSYLYKQKWAIS
Trigger: GCTGATGGCCCACTTTTGTTTATATAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTTACTAATGATCATAGCCAGGATTAGAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 90 bp TCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTAGATTaGTCTGGGTTCTCTTTTGTTAGTTTCTTTCTAACAGTGAACAAG +
Preference number: 1 (lower is better)
Translates to: SPQYPWKAKHSKILD*SGFSFVSFFLTVNK
Trigger: CTTGTTCACTGTTAGAAAGAAACTAACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 90 bp TTGAAAGTGGTTCTAATCCTGGCTATGATCATTAGTAAACATGTCTaGAGGTGGGGCAGAAGCTCTTATTTATATAAACAAAAGTGGGCC +
Preference number: 1 (lower is better)
Translates to: LKVVLILAMIISKHV*RWGRSSYLYKQKWA
Trigger: GGCCCACTTTTGTTTATATAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTTACTAATGATCATAGCCAGGATTAGAACCACTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCCCAGACACCGCCTCTaGGGGGCAGCCCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSPRHRL*GAAQGL
Trigger: CAGCCCCTGGGCTGCCCCTCAGAGGCGGTGTCTGGG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCCCAGACACCGCCTCTaGGGGGCAGCCCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSPRHRL*GAAQGL
Trigger: CAGCCCCTGGGCTGCCCCTCAGAGGCGGTGTCTGGG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACCCAGACACCGCCTCTaGGGGGCAGCCCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQPRHRL*GAAQGL
Trigger: CAGCCCCTGGGCTGCCCCTCAGAGGCGGTGTCTGGG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCGCCGGTGCAGAGTGCTaGGCACAAAGTCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAAGAEC*AQSPPQ
Trigger: CTGGGGAGGACTTTGTGCTCAGCACTCTGCACCGGC...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACGGGCAGCCCAGGGGCTaGGTTGATGATTTTGGAGCA +
Preference number: 2 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDGQPRG*VDDFGA
Trigger: TGCTCCAAAATCATCAACTCAGCCCCTGGGCTGCCC...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGGTAGCTGGAGGAACTaGCGGGCCCAGCTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAGSWRN*RAQLSD
Trigger: ATCTGAGAGCTGGGCCCGGCAGTTCCTCCAGCTACC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: HPALLEEWFWVSCNRSSANHPCP*NSPQEA
Trigger: GGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGAAGAACCTGGGGCCTaGCTGCAGGCAGCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVEEPGA*LQAAGS
Trigger: GGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGCTCAGTCTCCAACATaGAGGGCCCTGGTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDAQSPT*RALVGQ
Trigger: CTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGGGCAAATGGGCTGTTaGGGAACCTGTCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPGQMGC*GTCQEG
Trigger: CCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACTGGGAAGTGGGCAAATaGGCTGTTGGGGAACCTGTC +
Preference number: 2 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDWEVGK*AVGEPV
Trigger: GACAGGTTCCCCAACAGCCCATTTGCCCACTTCCCA...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGGGGCAGCCCAGGGGCTaGGTTGATGATTTTGGAGCA +
Preference number: 2 (lower is better)
Translates to: PVSLPALGPVHLESSVLRGQPRG*VDDFGA
Trigger: TGCTCCAAAATCATCAACTCAGCCCCTGGGCTGCCC...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCCCCTCCAACACTGCTaGGTTCTGGAGCAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSPLQHC*VLEQPP
Trigger: TGGAGGCTGCTCCAGAACTCAGCAGTGTTGGAGGGG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCAGGTCTGGTGTGGGCTaGGCAGTGGGAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIRSGVG*AVGSGQ
Trigger: TTGCCCACTTCCCACTGCTCAGCCCACACCAGACCT...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: HPALLEEWFWVSCNRSSARQLVP*TRDEEL
Trigger: CAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGCTAAGAGTGGCCGGTaGAGAGTGCTGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAAKSGR*RVLSTK
Trigger: CTTTGTGCTCAGCACTCTGCACCGGCCACTCTTAGC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGAGGATTCACAGGGCATaGCCAGTGCACCCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: PVSLPALGPVHLESSVLRRIHRA*PVHPAQ
Trigger: CTGAGCTGGGTGCACTGGCCATGCCCTGTGAATCCT...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGGGCAAATGGGCTGTTaGGGAACCTGTCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSGQMGC*GTCQEG
Trigger: CCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVTHGRT*GLTAGS
Trigger: GCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGT...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTGCTCTGTTCACCCATaGAAGAACCTGGGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: HPALLEEWFWVSCNRSSACSVHP*KNLGPD
Trigger: GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCGCCGGTGCAGAGTGCTaGGCACAAAGTCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSAGAEC*AQSPPQ
Trigger: CTGGGGAGGACTTTGTGCTCAGCACTCTGCACCGGC...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAGCCGGTGCAGAGTGCTaGGCACAAAGTCCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQAGAEC*AQSPPQ
Trigger: CTGGGGAGGACTTTGTGCTCAGCACTCTGCACCGGC...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGAATGGAAACATTGCCTaGGCCCTTCAACGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: PVSLPALGPVHLESSVLRNGNIA*ALQRLG
Trigger: CCCGAGGCGTTGAAGGGCTCAGGCAATGTTTCCATT...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLNHPCP*NSPQEA
Trigger: GGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATT...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSFPRST*GRHSLR
Trigger: CCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACAGAGGTCTGGCTGAGTaGAGGGCTTTATTTGAGGAC +
Preference number: 2 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDRGLAE*RALFED
Trigger: GTCCTCAAATAAAGCCCTTCACTCAGCCAGACCTCT...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTTGGCCTGGAGTCCCTaGCCCATTCTCAAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: GASDTSEGHQLGQSLRSILAWSP*PILKPS
Trigger: TGAGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTCATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTC +
Preference number: 2 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSHAGPW*GRAENL
Trigger: GAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATG...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIQHAGP*WGRAEN
Trigger: ATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTG...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACCAGCCTCCAGCTTACTaGGGCAGTGAGGGACAAGAG +
Preference number: 2 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDQPPAY*GSEGQE
Trigger: CTCTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTG...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGTGTGGGCTGAGCAGTaGGAAGTGGGCAAATGGGCT +
Preference number: 2 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDVWAEQ*EVGKWA
Trigger: AGCCCATTTGCCCACTTCCCACTGCTCAGCCCACAC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQTHGRT*GLTAGS
Trigger: GCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGT...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTCACCCCTGGCCAAACTaGGACCTTTTGTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAHPWPN*DLLSDA
Trigger: AGCATCTGACAAAAGGTCCCAGTTTGGCCAGGGGTG...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTCTCCCTCACCCCTaGCCAAACTGGGACCTTTTG +
Preference number: 2 (lower is better)
Translates to: PVSLPALGPVHLESSVLRSLPHP*PNWDLL
Trigger: CAAAAGGTCCCAGTTTGGCCAGGGGTGAGGGAGAGA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGAGTCGCTGGGGGCCTaGCCACCTCTATTCCAGTAC +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSESLGA*PPLFQY
Trigger: GTACTGGAATAGAGGTGGCCAGGCCCCCAGCGACTC...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGCCAAGAAGAGTCGCTaGGGGCCTGGCCACCTCTAT +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSAKKSR*GPGHLY
Trigger: ATAGAGGTGGCCAGGCCCCCAGCGACTCTTCTTGGC...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGGCTTTATGTGACAGGTaGGGAAGAGCAGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEALCDR*GRAVFP
Trigger: AGGAAACACTGCTCTTCCTCACCTGTCACATAAAGC...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: VTLQKVISLARVSAVSLEFPRST*GRHSLR
Trigger: CCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPFPRST*GRHSLR
Trigger: CCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGCTTAGGGCAATGCTTTaGGCTGTGGAGAGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLLRAML*AVERSG
Trigger: GCCAGACCTCTCCACAGCTCAAAGCATTGCCCTAAG...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGAAGTGGGCCATCAGCTaGGGAGTAGCTCTAAAGCCA +
Preference number: 2 (lower is better)
Translates to: PVSLPALGPVHLESSVLRKWAIS*GVALKP
Trigger: TGGCTTTAGAGCTACTCCTCAGCTGATGGCCCACTT...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGCTAAGAGTGGCCGGTaGAGAGTGCTGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDAKSGR*RVLSTK
Trigger: CTTTGTGCTCAGCACTCTGCACCGGCCACTCTTAGC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAGCCTGTAGCCAACTGTaGTCCCAGGAGAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQACSQL*SQERLM
Trigger: CATCAGCCTCTCCTGGGAGCACAGTTGGCTACAGGC...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGCTCAGTCTCCAACATaGAGGGCCCTGGTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEAQSPT*RALVGQ
Trigger: CTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAGGGCCAGAAAGAGAGTaGAGCTTAGAGGCCCCTCCA +
Preference number: 2 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQGPERE*SLEAPP
Trigger: TGGAGGGGCCTCTAAGCTGCACTCTCTTTCTGGCCC...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTCTGCCAGAAGAGGCTaGTCCAAGGAAGCCGAATGC +
Preference number: 2 (lower is better)
Translates to: GASDTSEGHQLGQSLRSISARRG*SKEAEC
Trigger: GCATTCGGCTTCCTTGGAGCAGCCTCTTCTGGCAGA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCT +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSSRVFA*SWSSPP
Trigger: AGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTC +
Preference number: 2 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPHAGPW*GRAENL
Trigger: GAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACTGAGCAGTGGGAAGTaGGCAAATGGGCTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQLSSGK*ANGLLG
Trigger: CCCCAACAGCCCATTTGCCCACTTCCCACTGCTCAG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTCTGAGCAGTGGGAAGTaGGCAAATGGGCTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSLSSGK*ANGLLG
Trigger: CCCCAACAGCCCATTTGCCCACTTCCCACTGCTCAG...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAGTGTGGGCTGAGCAGTaGGAAGTGGGCAAATGGGCT +
Preference number: 2 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQVWAEQ*EVGKWA
Trigger: AGCCCATTTGCCCACTTCCCACTGCTCAGCCCACAC...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTCTCTCCCTCACCCCTaGCCAAACTGGGACCTTTTG +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSSLPHP*PNWDLL
Trigger: CAAAAGGTCCCAGTTTGGCCAGGGGTGAGGGAGAGA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAGAGTCGCTGGGGGCCTaGCCACCTCTATTCCAGTAC +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQESLGA*PPLFQY
Trigger: GTACTGGAATAGAGGTGGCCAGGCCCCCAGCGACTC...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGGCCAAGAAGAGTCGCTaGGGGCCTGGCCACCTCTAT +
Preference number: 2 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWAKKSR*GPGHLY
Trigger: ATAGAGGTGGCCAGGCCCCCAGCGACTCTTCTTGGC...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTAATGGAAACATTGCCTaGGCCCTTCAACGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSNGNIA*ALQRLG
Trigger: CCCGAGGCGTTGAAGGGCTCAGGCAATGTTTCCATT...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTTGGCCTGGAGTCCCTaGCCCATTCTCAAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFLAWSP*PILKPS
Trigger: TGAGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCGCCTGTAGCCAACTGTaGTCCCAGGAGAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAACSQL*SQERLM
Trigger: CATCAGCCTCTCCTGGGAGCACAGTTGGCTACAGGC...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGCTCAGTCTCCAACATaGAGGGCCCTGGTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEAQSPT*RALVGQ
Trigger: CTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGGGCCAGAAAGAGAGTaGAGCTTAGAGGCCCCTCCA +
Preference number: 2 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFGPERE*SLEAPP
Trigger: TGGAGGGGCCTCTAAGCTGCACTCTCTTTCTGGCCC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTGTACACACAGCCATTaGAGGCCCCAAGTACAGTGG +
Preference number: 2 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDCTHSH*RPQVQW
Trigger: CCACTGTACTTGGGGCCTGCAATGGCTGTGTGTACA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCAAGGAAGCCGAATaGAAGAGGCCCAGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: PVSLPALGPVHLESSVLRSKEAE*KRPSFS
Trigger: AGAAAAGCTGGGCCTCTTGCATTCGGCTTCCTTGGA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCT +
Preference number: 2 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQSRVFA*SWSSPP
Trigger: AGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWQHAGP*WGRAEN
Trigger: ATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTGGGAAGTGGGCAAATaGGCTGTTGGGGAACCTGTC +
Preference number: 2 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSWEVGK*AVGEPV
Trigger: GACAGGTTCCCCAACAGCCCATTTGCCCACTTCCCA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCCTGAGCAGTGGGAAGTaGGCAAATGGGCTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFLSSGK*ANGLLG
Trigger: CCCCAACAGCCCATTTGCCCACTTCCCACTGCTCAG...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACTGACTGCAGGCAGCTaGTTCCATGAACAAGGGACG +
Preference number: 2 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQLTAGS*FHEQGT
Trigger: CGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCACCCCTGGCCAAACTaGGACCTTTTGTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSHPWPN*DLLSDA
Trigger: AGCATCTGACAAAAGGTCCCAGTTTGGCCAGGGGTG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGGTTTGGGGTCTCTGTTaGACTTGGCCTGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQVWGLC*TWPGVP
Trigger: AGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGGCTGCTGGTGTGTGGTaGGTTTGGGGTCTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWAAGVW*VWGLCW
Trigger: CCAACAGAGACCCCAAACCCACCACACACCAGCAGC...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATTGGTGGTGAGGTTGTaGCTGCTGGTGTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VTLQKVISLARVSAVSLELVVRL*LLVCGG
Trigger: CCCACCACACACCAGCAGCCACAACCTCACCACCAA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTCATCTCAGGCCACGTaGCATGCCTGTGAGGACAAA +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSSSQAT*HACEDK
Trigger: TTTGTCCTCACAGGCATGCCACGTGGCCTGAGATGA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTACCGGTCCTCTGCTGTaGAGTGACATGTTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSTGPLL*SDMFRK
Trigger: CTTCCTGAACATGTCACTCCACAGCAGAGGACCGGT...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSENHPCP*NSPQEA
Trigger: GGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATT...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTGGCACCGACTCGCATaGTGGCTGTGTACCTCCTTT +
Preference number: 2 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFWHRLA*WLCTSF
Trigger: AAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTGGCACCGACTCGCATaGTGGCTGTGTACCTCCTTT +
Preference number: 2 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGWHRLA*WLCTSF
Trigger: AAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCTTAGGGCAATGCTTTaGGCTGTGGAGAGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPLRAML*AVERSG
Trigger: GCCAGACCTCTCCACAGCTCAAAGCATTGCCCTAAG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGGAAGAACCTGGGGCCTaGCTGCAGGCAGCTGGTTCC +
Preference number: 2 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWEEPGA*LQAAGS
Trigger: GGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTC...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCCTCTTTGTTGGTGGTaGGGTTGTGGCTGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGPLCWW*GCGCWC
Trigger: ACACCAGCAGCCACAACCTCACCACCAACAAAGAGG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTGTTATTCAGAGAGATaGGCCATCAAGGGGCTGCCC +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSCYSER*AIKGLP
Trigger: GGGCAGCCCCTTGATGGCTCATCTCTCTGAATAACA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGCCAATGCACAATCCTaGTCTGTGGTCACAACATCC +
Preference number: 2 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIANAQS*SVVTTS
Trigger: GGATGTTGTGACCACAGAGCAGGATTGTGCATTGGC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTCCAAGGAAGCCGAATaGAAGAGGCCCAGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSSKEAE*KRPSFS
Trigger: AGAAAAGCTGGGCCTCTTGCATTCGGCTTCCTTGGA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCAGTGCTCAAGGTGTTaGACGCAAAACATCCAGCTC +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSQCSRC*TQNIQL
Trigger: GAGCTGGATGTTTTGCGTGCAACACCTTGAGCACTG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACAGCCTCCAGCTTACTaGGGCAGTGAGGGACAAGAG +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEQPPAY*GSEGQE
Trigger: CTCTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGGGCAAATGGGCTGTTaGGGAACCTGTCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSGQMGC*GTCQEG
Trigger: CCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCTGACTGCAGGCAGCTaGTTCCATGAACAAGGGACG +
Preference number: 2 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWLTAGS*FHEQGT
Trigger: CGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGC +
Preference number: 2 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLTHGRT*GLTAGS
Trigger: GCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGT...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGGTGTGTGGTGGGTTTaGGGTCTCTGTTGGACTTGG +
Preference number: 2 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEGVWWV*GLCWTW
Trigger: CCAAGTCCAACAGAGACCCCAAACCCACCACACACC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGCCAAGAAGAGTCGCTaGGGGCCTGGCCACCTCTAT +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEAKKSR*GPGHLY
Trigger: ATAGAGGTGGCCAGGCCCCCAGCGACTCTTCTTGGC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAGAAGGTCATCAGCTTaGCCAGAGTCTCCGCAGTAT +
Preference number: 2 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVRRSSA*PESPQY
Trigger: ATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCT...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTGCATCCCTTTGGGTGTaGCAACAGCTGAGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGASLWV*QQLSLY
Trigger: GTAGAGACTCAGCTGTTGTCACACCCAAAGGGATGC...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCGCATCCCTTTGGGTGTaGCAACAGCTGAGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSASLWV*QQLSLY
Trigger: GTAGAGACTCAGCTGTTGTCACACCCAAAGGGATGC...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGTGAAGGGCTTTATTTaGGGACAGAATCACCCAGAC +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSVKGFI*GQNHPD
Trigger: GTCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCAC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGTGAAGGGCTTTATTTaGGGACAGAATCACCCAGAC +
Preference number: 2 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDVKGFI*GQNHPD
Trigger: GTCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCAC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACTTAGGGCAATGCTTTaGGCTGTGGAGAGGTCTGGC +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSELRAML*AVERSG
Trigger: GCCAGACCTCTCCACAGCTCAAAGCATTGCCCTAAG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCCTCTTTGTTGGTGGTaGGGTTGTGGCTGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: LQPPEAECLCITYIKQPFPLCWW*GCGCWC
Trigger: ACACCAGCAGCCACAACCTCACCACCAACAAAGAGG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATCCTCTGCTGTGGAGTaGCATGTTCAGGAAGGACCT +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSSAVE*HVQEGP
Trigger: AGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAGCCAGGGCTACCACCTaGAGCAGTGGTTCTTCAATT +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQARATT*SSGSSI
Trigger: AATTGAAGAACCACTGCTGCAGGTGGTAGCCCTGGC...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGCCAGGGCTACCACCTaGAGCAGTGGTTCTTCAATT +
Preference number: 2 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEARATT*SSGSSI
Trigger: AATTGAAGAACCACTGCTGCAGGTGGTAGCCCTGGC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTAGGATTCACAGGGCATaGCCAGTGCACCCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: FLWATSLKGSIPCSPCLARIHRA*PVHPAQ
Trigger: CTGAGCTGGGTGCACTGGCCATGCCCTGTGAATCCT...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTAGGATTCACAGGGCATaGCCAGTGCACCCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLRIHRA*PVHPAQ
Trigger: CTGAGCTGGGTGCACTGGCCATGCCCTGTGAATCCT...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTA +
Preference number: 2 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAKHVCR*GRSSYL
Trigger: TAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGTTTGGGGTCTCTGTTaGACTTGGCCTGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LQPPEAECLCITYIKQPFVWGLC*TWPGVP
Trigger: AGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTGCTGCTGGTGTGTGGTaGGTTTGGGGTCTCTGTTGG +
Preference number: 2 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAAAGVW*VWGLCW
Trigger: CCAACAGAGACCCCAAACCCACCACACACCAGCAGC...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATTGGTGGTGAGGTTGTaGCTGCTGGTGTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPELVVRL*LLVCGG
Trigger: CCCACCACACACCAGCAGCCACAACCTCACCACCAA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCATCTCAGGCCACGTaGCATGCCTGTGAGGACAAA +
Preference number: 2 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVESSQAT*HACEDK
Trigger: TTTGTCCTCACAGGCATGCCACGTGGCCTGAGATGA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATCATCTCAGGCCACGTaGCATGCCTGTGAGGACAAA +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSSQAT*HACEDK
Trigger: TTTGTCCTCACAGGCATGCCACGTGGCCTGAGATGA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGAGGAAGGACCTCAGATaGAATGTCCCAGGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVERKDLR*NVPGPK
Trigger: TTTGGGGCCTGGGACATTCCATCTGAGGTCCTTCCT...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCTGGAGGAGTGGTTCTaGGTAAGCTGCAACCGGTCC +
Preference number: 2 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLLEEWF*VSCNRS
Trigger: GGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTGGAGGAGTGGTTCTaGGTAAGCTGCAACCGGTCC +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSLEEWF*VSCNRS
Trigger: GGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGCATCCCTTTGGGTGTaGCAACAGCTGAGTCTCTAC +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEASLWV*QQLSLY
Trigger: GTAGAGACTCAGCTGTTGTCACACCCAAAGGGATGC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPERQLVP*TRDEEL
Trigger: CAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCACGTGGCATGCCTGTaGGGACAAACATCAGGCCAA +
Preference number: 2 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLHVACL*GQTSGQ
Trigger: TTGGCCTGATGTTTGTCCTCACAGGCATGCCACGTG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTTCTGCCAGAAGAGGCTaGTCCAAGGAAGCCGAATGC +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSSARRG*SKEAEC
Trigger: GCATTCGGCTTCCTTGGAGCAGCCTCTTCTGGCAGA...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCT +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPESRVFA*SWSSPP
Trigger: AGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCAACATCCACACTGGCTaGCATTTGGGCATTAGATGT +
Preference number: 2 (lower is better)
Translates to: GASDTSEGHQLGQSLRSINIHTG*HLGIRC
Trigger: ACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTT...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAACATCCACACTGGCTaGCATTTGGGCATTAGATGT +
Preference number: 2 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVNIHTG*HLGIRC
Trigger: ACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTT...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCCACAATCCTGCTCTGTaGTCACAACATCCACACTGG +
Preference number: 2 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFHNPAL*SQHPHW
Trigger: CCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTG...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGCACAATCCTGCTCTGTaGTCACAACATCCACACTGG +
Preference number: 2 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEHNPAL*SQHPHW
Trigger: CCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTG...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTTGCTCTGTTCACCCATaGAAGAACCTGGGGCCTGAC +
Preference number: 2 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLCSVHP*KNLGPD
Trigger: GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCA...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGGGTCTCTGTTGGACTTaGCCTGGAGTCCCTGACCCA +
Preference number: 2 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWGLCWT*PGVPDP
Trigger: TGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACC...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTCTGTAGAGTCCACTTaGACCTGGAGGACAACACTT +
Preference number: 2 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQSVEST*TWRTTL
Trigger: AAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAGCTTTATGTGACAGGTaGGGAAGAGCAGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: VTLQKVISLARVSAVSLEALCDR*GRAVFP
Trigger: AGGAAACACTGCTCTTCCTCACCTGTCACATAAAGC...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGTGAAGGGCTTTATTTaGGGACAGAATCACCCAGAC +
Preference number: 2 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFVKGFI*GQNHPD
Trigger: GTCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCAC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGACTTTGGGAAATGTGTaGCTGGACTTAGGTCACAAG +
Preference number: 2 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQTLGNV*LDLGHK
Trigger: CTTGTGACCTAAGTCCAGTCACACATTTCCCAAAGT...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTTGTACACACAGCCATTaGAGGCCCCAAGTACAGTGG +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSCTHSH*RPQVQW
Trigger: CCACTGTACTTGGGGCCTGCAATGGCTGTGTGTACA...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAACCCAGGGATCCATCATaGCTCTGTTTACTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQPRDPS*LCLLCY
Trigger: GTAACAGAGTAAACAGAGGCATGATGGATCCCTGGG...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTCTGTTCCCCATGCCTTaGTTAAAAACTGACTGGAAG +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSLFPMP*LKTDWK
Trigger: CTTCCAGTCAGTTTTTAAGCAAGGCATGGGGAACAG...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSHLMAF*QKRLLQ
Trigger: TTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTGCAACCGGTCCTCTaGTGTGGAGTGACATGTTCA +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSLQPVL*CGVTCS
Trigger: TGAACATGTCACTCCACAGCAGAGGACCGGTTGCAG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACAGTGCTCAAGGTGTTaGACGCAAAACATCCAGCTC +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEQCSRC*TQNIQL
Trigger: GAGCTGGATGTTTTGCGTGCAACACCTTGAGCACTG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGGGTGTTTAAACCTTTaGCAGAGCATCCCTTTGGGT +
Preference number: 2 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPGCLNL*QSIPLG
Trigger: ACCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCC...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCAGGCTGATGGTCTCCTaGGTGTTTAAACCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: TLAGIWALDVVYTQPLQARLMVS*VFKPLA
Trigger: TGCCAAAGGTTTAAACACCCAGGAGACCATCAGCCT...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTACACTGGCTGGCATTTaGGCATTAGATGTAGTGTAC +
Preference number: 2 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSTLAGI*ALDVVY
Trigger: GTACACTACATCTAATGCCCAAATGCCAGCCAGTGT...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAACCGGTCCTCTGCTGTaGAGTGACATGTTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPETGPLL*SDMFRK
Trigger: CTTCCTGAACATGTCACTCCACAGCAGAGGACCGGT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGGTGAGTGGCTTCAGTaGCATGATGAAGAAGGCATC +
Preference number: 2 (lower is better)
Translates to: LQPPEAECLCITYIKQPFGEWLQ*HDEEGI
Trigger: GATGCCTTCTTCATCATGCCACTGAAGCCACTCACC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGATTTCATCCCCAACTaGCGATTTCCTTTCATTTGG +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSDFIPN*RFPFIW
Trigger: CCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 90 bp CTTGGACCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTaGTGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGT +
Preference number: 2 (lower is better)
Translates to: LGPGGQHFVPNVPPC*WVSESDRGWHVLEG
Trigger: ACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 90 bp ATTTCTATTCTCCAAACCCTGTGGAGTTTTTCAGTTCCCGTGTCTTaGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGG +
Preference number: 2 (lower is better)
Translates to: ISILQTLWSFSVPVS*PALGPVHLESSVLR
Trigger: CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGAACTGAAAAACTCCACAGGGTTTGGAGAATAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTGGCACCGACTCGCATaGTGGCTGTGTACCTCCTTT +
Preference number: 2 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTWHRLA*WLCTSF
Trigger: AAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCCCCTCCAACACTGCTaGGTTCTGGAGCAGCCTCCA +
Preference number: 2 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGPLQHC*VLEQPP
Trigger: TGGAGGCTGCTCCAGAACTCAGCAGTGTTGGAGGGG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTG +
Preference number: 2 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTRQLVP*TRDEEL
Trigger: CAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCT...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAACTTTGGGAAATGTGTaGCTGGACTTAGGTCACAAG +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQTLGNV*LDLGHK
Trigger: CTTGTGACCTAAGTCCAGTCACACATTTCCCAAAGT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAAGTCCATTCCAGAAATaGCCTCTTACTTGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPESPFQK*PLTCGP
Trigger: GGGGCCACAAGTAAGAGGTCATTTCTGGAATGGACT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTAGTCCATTCCAGAAATaGCCTCTTACTTGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: FLWATSLKGSIPCSPCLASPFQK*PLTCGP
Trigger: GGGGCCACAAGTAAGAGGTCATTTCTGGAATGGACT...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTGCCTTGCTTAAAAACTaGCTGGAAGTGCTCAACTCT +
Preference number: 2 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGALLKN*LEVLNS
Trigger: AGAGTTGAGCACTTCCAGTCAGTTTTTAAGCAAGGC...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAATGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCA +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSECIWCQ*HFRRSS
Trigger: TGATGACCTTCTGAAGTGTCACTGGCACCATATGCA...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSQHAGP*WGRAEN
Trigger: ATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATCAGCCTCCAGCTTACTaGGGCAGTGAGGGACAAGAG +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYQPPAY*GSEGQE
Trigger: CTCTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTG...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAACACTGGCTGGCATTTaGGCATTAGATGTAGTGTAC +
Preference number: 2 (lower is better)
Translates to: VTLQKVISLARVSAVSLETLAGI*ALDVVY
Trigger: GTACACTACATCTAATGCCCAAATGCCAGCCAGTGT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTGCTCTCCTGGAGGAGTaGTTCTGGGTAAGCTGCAAC +
Preference number: 2 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTALLEE*FWVSCN
Trigger: GTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGC...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATAATGGAAACATTGCCTaGGCCCTTCAACGCCTCGGG +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYNGNIA*ALQRLG
Trigger: CCCGAGGCGTTGAAGGGCTCAGGCAATGTTTCCATT...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGGGCAACCTCTTTaGAAGGTTCTATTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSGQPL*KVLFPV
Trigger: AACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTTGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCA +
Preference number: 2 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLCIWCQ*HFRRSS
Trigger: TGATGACCTTCTGAAGTGTCACTGGCACCATATGCA...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATGGAATCCAGTGTGTTaGGGTCAAGCACTCTGTAGA +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEWNPVC*GQALCR
Trigger: TCTACAGAGTGCTTGACCTCAACACACTGGATTCCA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGCTAAGAGTGGCCGGTaGAGAGTGCTGAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYAKSGR*RVLSTK
Trigger: CTTTGTGCTCAGCACTCTGCACCGGCCACTCTTAGC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTCACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTHLMAF*QKRLLQ
Trigger: TTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTG...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTCTGCAACCGGTCCTCTaGTGTGGAGTGACATGTTCA +
Preference number: 2 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTLQPVL*CGVTCS
Trigger: TGAACATGTCACTCCACAGCAGAGGACCGGTTGCAG...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTAGGCTGATGGTCTCCTaGGTGTTTAAACCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLRLMVS*VFKPLA
Trigger: TGCCAAAGGTTTAAACACCCAGGAGACCATCAGCCT...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAAGGCTGATGGTCTCCTaGGTGTTTAAACCTTTGGCA +
Preference number: 2 (lower is better)
Translates to: TGSVISSPTGDFLSFGPERLMVS*VFKPLA
Trigger: TGCCAAAGGTTTAAACACCCAGGAGACCATCAGCCT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTACATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTC +
Preference number: 2 (lower is better)
Translates to: LNMPRCFVAAESTANLSLHAGPW*GRAENL
Trigger: GAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATG...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTAGGCCCCAAGTACAGTaGGTTTTGCTCTTGGATTAT +
Preference number: 2 (lower is better)
Translates to: LQPPEAECLCITYIKQPFRPQVQ*VLLLDY
Trigger: ATAATCCAAGAGCAAAACCCACTGTACTTGGGGCCT...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTA +
Preference number: 2 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGKHVCR*GRSSYL
Trigger: TAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTT...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATTGGGAAGTGGGCAAATaGGCTGTTGGGGAACCTGTC +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYWEVGK*AVGEPV
Trigger: GACAGGTTCCCCAACAGCCCATTTGCCCACTTCCCA...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAATGACCTCTTACTTGTaGCCCCACAAAAGTCCTCTT +
Preference number: 2 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEMTSYL*PHKSPL
Trigger: AAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCAT...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTCATTTGCAAGTGGCTaGATGGATTCAAAGTTAGCA +
Preference number: 2 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSSFASG*MDSKLA
Trigger: TGCTAACTTTGAATCCATCCAGCCACTTGCAAATGA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAACTACTCAGTGAATGGTaGTTCTTGTTGCATATGGTG +
Preference number: 2 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQLLSEW*FLLHMV
Trigger: CACCATATGCAACAAGAACCACCATTCACTGAGTAG...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGCTCTCCTGGAGGAGTaGTTCTGGGTAAGCTGCAAC +
Preference number: 2 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFALLEE*FWVSCN
Trigger: GTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTTTTGTAAACAAGAATaGCCGTCTCGATGGTCTTTG +
Preference number: 2 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQFCKQE*PSRWSL
Trigger: CAAAGACCATCGAGACGGCCATTCTTGTTTACAAAA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTGGGTTTTGCTCTTGGATTATCTTTA +
Preference number: 2 (lower is better)
Translates to: TLAGIWALDVVYTQP*QAPSTVGFALGLSL
Trigger: TAAAGATAATCCAAGAGCAAAACCCACTGTACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTAAGTGGGCCATCAGCTaGGGAGTAGCTCTAAAGCCA +
Preference number: 2 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFKWAIS*GVALKP
Trigger: TGGCTTTAGAGCTACTCCTCAGCTGATGGCCCACTT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTCAAAGATTCTAGATTaGTCTGGGTTCTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSSKILD*SGFSFV
Trigger: AACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTAGGCCCCAAGTACAGTaGGTTTTGCTCTTGGATTAT +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSRPQVQ*VLLLDY
Trigger: ATAATCCAAGAGCAAAACCCACTGTACTTGGGGCCT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGGTCTCTGTTGGACTTaGCCTGGAGTCCCTGACCCA +
Preference number: 2 (lower is better)
Translates to: LNMPRCFVAAESTANLSLGLCWT*PGVPDP
Trigger: TGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCAGGAAGGACCTCAGATaGAATGTCCCAGGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: TTCSSGSSIAICISLKYPRKDLR*NVPGPK
Trigger: TTTGGGGCCTGGGACATTCCATCTGAGGTCCTTCCT...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR TCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCAGAGGTCTGGCTGAGTaGAGGGCTTTATTTGAGGAC +
Preference number: 2 (lower is better)
Translates to: TTCSSGSSIAICISLKYPRGLAE*RALFED
Trigger: GTCCTCAAATAAAGCCCTTCACTCAGCCAGACCTCT...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR TCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTAGTCCATTCCAGAAATaGCCTCTTACTTGTGGCCCC +
Preference number: 2 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFSPFQK*PLTCGP
Trigger: GGGGCCACAAGTAAGAGGTCATTTCTGGAATGGACT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGCCAATGCACAATCCTaGTCTGTGGTCACAACATCC +
Preference number: 2 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFANAQS*SVVTTS
Trigger: GGATGTTGTGACCACAGAGCAGGATTGTGCATTGGC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTAAAACTGACTGGAAGTaGTCAACTCTCCTGTTTAAA +
Preference number: 2 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGKTDWK*STLLFK
Trigger: TTTAAACAGGAGAGTTGAGCACTTCCAGTCAGTTTT...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGATGAAGAAGGCATCTaGTATCGATATGAAGACGTA +
Preference number: 2 (lower is better)
Translates to: LQPPEAECLCITYIKQPFDEEGI*YRYEDV
Trigger: TACGTCTTCATATCGATACCAGATGCCTTCTTCATC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 90 bp GTATTTGATGTGCTTCTAGATAATTCTTTGGCAGATAAGAATGAATaGGGGTCCCAGACCCACCATCCCGTAAGGCCACATGAATTGAGG +
Preference number: 2 (lower is better)
Translates to: VFDVLLDNSLADKNE*GSQTHHPVRPHELR
Trigger: CCTCAATTCATGTGGCCTTACGGGATGGTGGGTCTGGGACCCCAATTCATTCTTATCTGCCAAAGAATTATCTAGAAGCACATCAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGCTTTATGTGACAGGTaGGGAAGAGCAGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYALCDR*GRAVFP
Trigger: AGGAAACACTGCTCTTCCTCACCTGTCACATAAAGC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCA +
Preference number: 2 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSCIWCQ*HFRRSS
Trigger: TGATGACCTTCTGAAGTGTCACTGGCACCATATGCA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATCCCAGGGATCCATCATaGCTCTGTTTACTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYPRDPS*LCLLCY
Trigger: GTAACAGAGTAAACAGAGGCATGATGGATCCCTGGG...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTTCTGATTATCATTTaGAAGTGGCTGGATGGATTC +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSLLIII*KWLDGF
Trigger: GAATCCATCCAGCCACTTGCAAATGATAATCAGAAG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGTCAAAGATTCTAGATTaGTCTGGGTTCTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWSKILD*SGFSFV
Trigger: AACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGA...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGGGTGTTTAAACCTTTaGCAGAGCATCCCTTTGGGT +
Preference number: 2 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFGCLNL*QSIPLG
Trigger: ACCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTA +
Preference number: 2 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWKHVCR*GRSSYL
Trigger: TAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCATTATCATTTGCAAGTaGCTGGATGGATTCAAAGTT +
Preference number: 2 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFIIICK*LDGFKV
Trigger: AACTTTGAATCCATCCAGCCACTTGCAAATGATAAT...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGATGAAGAAGGCATCTaGTATCGATATGAAGACGTA +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSDEEGI*YRYEDV
Trigger: TACGTCTTCATATCGATACCAGATGCCTTCTTCATC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATTCTGTAGAGTCCACTTaGACCTGGAGGACAACACTT +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYSVEST*TWRTTL
Trigger: AAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGA...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTCTGGGCAACCTCTTTaGAAGGTTCTATTCCCTGTT +
Preference number: 2 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFSGQPL*KVLFPV
Trigger: AACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR TCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATCCATTAGCTACTCAGTaGATGGTGGTTCTTGTTGCA +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYPLATQ*MVVLVA
Trigger: TGCAACAAGAACCACCATTCACTGAGTAGCTAATGG...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAA +
Preference number: 2 (lower is better)
Translates to: FIKATLKYAKMFCSCREHHLMAF*QKRLLQ
Trigger: TTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCACCCCTGGCCAAACTaGGACCTTTTGTCAGATGCT +
Preference number: 2 (lower is better)
Translates to: FIKATLKYAKMFCSCREHHPWPN*DLLSDA
Trigger: AGCATCTGACAAAAGGTCCCAGTTTGGCCAGGGGTG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAAGAAGGTCATCAGCTTaGCCAGAGTCTCCGCAGTAT +
Preference number: 2 (lower is better)
Translates to: LNMPRCFVAAESTANLSLRRSSA*PESPQY
Trigger: ATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCT...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR CAA 90 bp TCTAGCCAGGGCTACCACCTGCAGCAGTGGTTCTTCAATTGCTATTaGCATTTCTTTAAAGTACCCCAGTCCTTAATTCTCAGTAAAGTT +
Preference number: 2 (lower is better)
Translates to: SSQGYHLQQWFFNCY*HFFKVPQSLILSKV
Trigger: AACTTTACTGAGAATTAAGGACTGGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGTAGCCCTGGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTTCAAAGATTCTAGATTaGTCTGGGTTCTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: QPPEAECLCITYIKQPFSSKILD*SGFSFV
Trigger: AACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGA...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCAGGCCCCAAGTACAGTaGGTTTTGCTCTTGGATTAT +
Preference number: 2 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGRPQVQ*VLLLDY
Trigger: ATAATCCAAGAGCAAAACCCACTGTACTTGGGGCCT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCACACTGGCTGGCATTTaGGCATTAGATGTAGTGTAC +
Preference number: 2 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGTLAGI*ALDVVY
Trigger: GTACACTACATCTAATGCCCAAATGCCAGCCAGTGT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCTTCTGATTATCATTTaGAAGTGGCTGGATGGATTC +
Preference number: 2 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFLLIII*KWLDGF
Trigger: GAATCCATCCAGCCACTTGCAAATGATAATCAGAAG...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGACAAAGAGAAACTTTaGGAAATGTGTGACTGGACT +
Preference number: 2 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYDKEKL*EMCDWT
Trigger: AGTCCAGTCACACATTTCCCAAAGTTTCTCTTTGTC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTaGAGCTTAAACAGCAACCTAACAAAATACAAATGTCCACCCAGC +
Preference number: 2 (lower is better)
Translates to: LNMPRCFVAAESTAN*SLNSNLTKYKCPPS
Trigger: GCTGGGTGGACATTTGTATTTTGTTAGGTTGCTGTTTAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCTACTCAGTGAATGGTaGTTCTTGTTGCATATGGTG +
Preference number: 2 (lower is better)
Translates to: FIKATLKYAKMFCSCREHLLSEW*FLLHMV
Trigger: CACCATATGCAACAAGAACCACCATTCACTGAGTAG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR CAA 90 bp CCTCTGTTTACTCTGTTACTTTGGTTCTTAAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PLFTLLLWFLSYQRL*LRRPQCLKVVLILA
Trigger: AGCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACTTAAGAACCAAAGTAACAGAGTAAACAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACGACAAAGAGAAACTTTaGGAAATGTGTGACTGGACT +
Preference number: 2 (lower is better)
Translates to: FIKATLKYAKMFCSCREHDKEKL*EMCDWT
Trigger: AGTCCAGTCACACATTTCCCAAAGTTTCTCTTTGTC...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR CAA 90 bp TGGTTCTTAAGTTATCAAAGACTTTTGTTAAGAAGGCCCCAATGTTaGAAAGTGGTTCTAATCCTGGCTATGATCATTAGTAAACATGTC +
Preference number: 2 (lower is better)
Translates to: WFLSYQRLLLRRPQC*KVVLILAMIISKHV
Trigger: GACATGTTTACTAATGATCATAGCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACTTAAGAACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp ACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGTGCTaGGCACAAAGTCCTCCCCAGACACCGCCTCTGAGG +
Preference number: 3 (lower is better)
Translates to: TPRGLRVAGAEC*AQSPPQTPPLR
Trigger: CCTCAGAGGCGGTGTCTGGGGAGGACTTTGTGCTCAGCACTCTGCACCGGCCACTCTTAGCCCCCGAGGCGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GGTCTGGTGTGGGCTGAGCAGTGGGAAGTGGGCAAATaGGCTGTTGGGGAACCTGTCAGGAGGGGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: GLVWAEQWEVGK*AVGEPVRRGVG
Trigger: CCCCACTCCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCACTTCCCACTGCTCAGCCCACACCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp CTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTaGGGATTCACAGGGCATGGCCAGTGCACCCAGCTC +
Preference number: 3 (lower is better)
Translates to: LLFPGVPEGVTA*GFTGHGQCTQL
Trigger: GAGCTGGGTGCACTGGCCATGCCCTGTGAATCCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp CAGTGCACCCAGCTCAGTCTCCAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAATCTCTCCACAGGCAGA +
Preference number: 3 (lower is better)
Translates to: QCTQLSLQHAGP*WGRAENLSTGR
Trigger: TCTGCCTGTGGAGAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGCTGGGTGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp TGCACCCAGCTCAGTCTCCAACATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTCTCCACAGGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: CTQLSLQHAGPW*GRAENLSTGRS
Trigger: ACTTCTGCCTGTGGAGAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGCTGGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GTGGCTGCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTaGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGC +
Preference number: 3 (lower is better)
Translates to: VAAGVWWVWGLC*TWPGVPDPFSS
Trigger: GCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTAGCCCAGGGGCTGAGTaGATGATTTTGGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSSPGAE*MILEQL
Trigger: CAGCTGCTCCAAAATCATCAACTCAGCCCCTGGGCT...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGGGTTTGGGGTCTCTGTaGGACTTGGCCTGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: PVSLPALGPVHLESSVLRGLGSL*DLAWSP
Trigger: GGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACC...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACCTCCACAGGCAGAAGTaGGAATCACCCCTGCCCGTG +
Preference number: 3 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDLHRQK*ESPLPV
Trigger: CACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAG...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTGGGCAAATGGGCTGTaGGGGAACCTGTCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDWANGL*GNLSGG
Trigger: CCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGGTTTGGGGTCTCTGTaGGACTTGGCCTGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVGLGSL*DLAWSP
Trigger: GGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGGTTTGGGGTCTCTGTaGGACTTGGCCTGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIGLGSL*DLAWSP
Trigger: GGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp ACCCATGGAAGAACCTGGGGCCTGACTGCAGGCAGCTaGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: THGRTWGLTAGS*FHEQGTKSCPR
Trigger: CCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTAGCCCAGGGGCTGAGTaGATGATTTTGGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPSPGAE*MILEQL
Trigger: CAGCTGCTCCAAAATCATCAACTCAGCCCCTGGGCT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTGGCAGAGCATCCCTTaGGGTGTGACAACAGCTGAG +
Preference number: 3 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPWQSIP*GVTTAE
Trigger: CTCAGCTGTTGTCACACCCAAAGGGATGCTCTGCCA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp CTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCCTGTAGCCAACTGTGC +
Preference number: 3 (lower is better)
Translates to: LSTGRSWNHPCP*NSPQEACSQLC
Trigger: GCACAGTTGGCTACAGGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp CATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGGATTCACAGGGCATGG +
Preference number: 3 (lower is better)
Translates to: HDGCVPPFPRST*GRHSLRIHRAW
Trigger: CCATGCCCTGTGAATCCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp CAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTaGCTGCAGGCAGCTGGTTCCATGAACAAGGGACGA +
Preference number: 3 (lower is better)
Translates to: QMLCSPMEEPGA*LQAAGSMNKGR
Trigger: TCGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GTGTTGCACGCAAAACATCCAGCTCTCCTGGAGGAGTaGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGTG +
Preference number: 3 (lower is better)
Translates to: VLHAKHPALLEE*FWVSCNRSSAV
Trigger: CACAGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATGTTTTGCGTGCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCCTCCACAGGCAGAAGTaGGAATCACCCCTGCCCGTG +
Preference number: 3 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFLHRQK*ESPLPV
Trigger: CACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAG...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCTCCACAGGCAGAAGTaGGAATCACCCCTGCCCGTG +
Preference number: 3 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGLHRQK*ESPLPV
Trigger: CACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTGGTGTGTGGTGGGTTaGGGGTCTCTGTTGGACTTG +
Preference number: 3 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVWCVVG*GSLLDL
Trigger: CAAGTCCAACAGAGACCCCAAACCCACCACACACCA...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTGGTGTGTGGTGGGTTaGGGGTCTCTGTTGGACTTG +
Preference number: 3 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSWCVVG*GSLLDL
Trigger: CAAGTCCAACAGAGACCCCAAACCCACCACACACCA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp AAGAACCTGGGGCCTGACTGCAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTGTCCAAGGTGAGCTAT +
Preference number: 3 (lower is better)
Translates to: KNLGPDCRQLVP*TRDEELSKVSY
Trigger: ATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 72 bp GGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTaGTGTGGAGTGACATGTTCAGGAAGGACCTCAGAT +
Preference number: 3 (lower is better)
Translates to: GGVVLGKLQPVL*CGVTCSGRTSD
Trigger: ATCTGAGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GCCTGTGAGGACAAACATCAGGCCAAGAAGAGTCGCTaGGGGCCTGGCCACCTCTATTCCAGTACTAAGCAT +
Preference number: 3 (lower is better)
Translates to: ACEDKHQAKKSR*GPGHLYSSTKH
Trigger: ATGCTTAGTACTGGAATAGAGGTGGCCAGGCCCCCAGCGACTCTTCTTGGCCTGATGTTTGTCCTCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAATGGGCAAATGGGCTGTaGGGGAACCTGTCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEWANGL*GNLSGG
Trigger: CCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCA...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTGGTGTGTGGTGGGTTaGGGGTCTCTGTTGGACTTG +
Preference number: 3 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQWCVVG*GSLLDL
Trigger: CAAGTCCAACAGAGACCCCAAACCCACCACACACCA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp TTCTGGGTAAGCTGCAACCGGTCCTCTGCTGTGGAGTaGCATGTTCAGGAAGGACCTCAGATGGAATGTCCC +
Preference number: 3 (lower is better)
Translates to: FWVSCNRSSAVE*HVQEGPQMECP
Trigger: GGGACATTCCATCTGAGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGACCGGTTGCAGCTTACCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp CTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTaGGGTCAAGCACTCTGTAGAGTCCACTTGGACCTG +
Preference number: 3 (lower is better)
Translates to: LLLVQSTWNPVC*GQALCRVHLDL
Trigger: CAGGTCCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 72 bp GGCCAGGAGAAGATGATTGAGCACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAAGGAAGCCGAATGCAA +
Preference number: 3 (lower is better)
Translates to: GQEKMIEHLMAF*QKRLLQGSRMQ
Trigger: TTGCATTCGGCTTCCTTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTGCTCAATCATCTTCTCCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTGGCAGAGCATCCCTTaGGGTGTGACAACAGCTGAG +
Preference number: 3 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEWQSIP*GVTTAE
Trigger: CTCAGCTGTTGTCACACCCAAAGGGATGCTCTGCCA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGAAGGTGAGCTATCTGTaGTTGGGGAAGAAAAGGACC +
Preference number: 3 (lower is better)
Translates to: PVSLPALGPVHLESSVLRKVSYL*LGKKRT
Trigger: GGTCCTTTTCTTCCCCAACAACAGATAGCTCACCTT...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 72 bp GACAGAATCACCCAGACAAAAGGGCCAGAAAGAGAGTaGAGCTTAGAGGCCCCTCCAACACTGCTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: DRITQTKGPERE*SLEAPPTLLSS
Trigger: AGAACTCAGCAGTGTTGGAGGGGCCTCTAAGCTGCACTCTCTTTCTGGCCCTTTTGTCTGGGTGATTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp CTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGCTGGTTCCATGAACAA +
Preference number: 3 (lower is better)
Translates to: LLSDALFTHGRT*GLTAGSWFHEQ
Trigger: TTGTTCATGGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp CTGCTGTGGAGTGACATGTTCAGGAAGGACCTCAGATaGAATGTCCCAGGCCCCAAACCCATTAGCTACTCA +
Preference number: 3 (lower is better)
Translates to: LLWSDMFRKDLR*NVPGPKPISYS
Trigger: TGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAGGTCCTTCCTGAACATGTCACTCCACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGACCTaGAGGACAACACTTTGTGCCAAACGTGCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: VEVKHSVESTWT*RTTLCAKRASL
Trigger: CAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACCTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp CAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTaGACCTGGAGGACAACACTTTGTGCCAAACGTGCC +
Preference number: 3 (lower is better)
Translates to: QCVEVKHSVEST*TWRTTLCAKRA
Trigger: GGCACGTTTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTG +
Preference number: 3 (lower is better)
Translates to: LQPPEAECLCITYIKQPFVYTQP*QAPSTV
Trigger: CACTGTACTTGGGGCCTGCAATGGCTGTGTGTACAC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACAAAAGTCCTCTTTGTaGGTGGTGAGGTTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQQKSSL*VVRLWL
Trigger: CAGCCACAACCTCACCACCAACAAAGAGGACTTTTG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTAGCCCAGGGGCTGAGTaGATGATTTTGGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: QPPEAECLCITYIKQPFSSPGAE*MILEQL
Trigger: CAGCTGCTCCAAAATCATCAACTCAGCCCCTGGGCT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTGGGTGTTTAAACCTTaGGCAGAGCATCCCTTTGGG +
Preference number: 3 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAWVFKP*AEHPFG
Trigger: CCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCCA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTG +
Preference number: 3 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAVYTQP*QAPSTV
Trigger: CACTGTACTTGGGGCCTGCAATGGCTGTGTGTACAC...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACCAAACTGGGACCTTTaGTCAGATGCTCTGTTCACC +
Preference number: 3 (lower is better)
Translates to: VTLQKVISLARVSAVSLEPNWDL*SDALFT
Trigger: GGTGAACAGAGCATCTGACAAAAGGTCCCAGTTTGG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGCTCTGGGCAACCTCTTaGAAAGGTTCTATTCCCTGT +
Preference number: 3 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQLWATS*KGSIPC
Trigger: ACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAG...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGTCTCCGCAGTATCCTaGGAAAGCCAAGCACTCAAA +
Preference number: 3 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEVSAVS*ESQALK
Trigger: TTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGAC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAGTCTCCGCAGTATCCTaGGAAAGCCAAGCACTCAAA +
Preference number: 3 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQVSAVS*ESQALK
Trigger: TTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGAC...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATCAGTTCCCGTGTCTTaGCCTGCTCTTGGTCCAGTC +
Preference number: 3 (lower is better)
Translates to: TGSVISSPTGDFLSFGPESVPVS*PALGPV
Trigger: GACTGGACCAAGAGCAGGCAAAGACACGGGAACTGA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 72 bp CAGCTGAGGAGTAGCTCTAAAGCCAATGCACAATCCTaGTCTGTGGTCACAACATCCACACTGGCTGGCATT +
Preference number: 3 (lower is better)
Translates to: QLRSSSKANAQS*SVVTTSTLAGI
Trigger: AATGCCAGCCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTGCATTGGCTTTAGAGCTACTCCTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 72 bp AACCCTGTGGAGTTTTTCAGTTCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: NPVEFFSSRVFA*SWSSPPGIQCV
Trigger: AACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGAACTGAAAAACTCCACAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GTGCAATTCCAAATGTTGAGCCTTCCAAATGAGGCTTaGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: VQFQMLSLPNEA*VLLCSHQRQSV
Trigger: GACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACATTTGGAATTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTGGGCAAATGGGCTGTaGGGGAACCTGTCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFWANGL*GNLSGG
Trigger: CCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAGTGAGCTATCTGTTGTaGGGGAAGAAAAGGACCACA +
Preference number: 3 (lower is better)
Translates to: VTLQKVISLARVSAVSLEVSYLL*GKKRTT
Trigger: TGTGGTCCTTTTCTTCCCCAACAACAGATAGCTCAC...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAAGGTGAGCTATCTGTaGTTGGGGAAGAAAAGGACC +
Preference number: 3 (lower is better)
Translates to: VTLQKVISLARVSAVSLEKVSYL*LGKKRT
Trigger: GGTCCTTTTCTTCCCCAACAACAGATAGCTCACCTT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACTCTGGGCAACCTCTTaGAAAGGTTCTATTCCCTGT +
Preference number: 3 (lower is better)
Translates to: VTLQKVISLARVSAVSLELWATS*KGSIPC
Trigger: ACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCAGTGCTCAAGGTGTaGCACGCAAAACATCCAGCT +
Preference number: 3 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSVLKV*HAKHPA
Trigger: AGCTGGATGTTTTGCGTGCAACACCTTGAGCACTGA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAATCAGTGCTCAAGGTGTaGCACGCAAAACATCCAGCT +
Preference number: 3 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSESVLKV*HAKHPA
Trigger: AGCTGGATGTTTTGCGTGCAACACCTTGAGCACTGA...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTGGAGGACAACACTTaGTGCCAAACGTGCCTCCTT +
Preference number: 3 (lower is better)
Translates to: QPPEAECLCITYIKQPFSLEDNT*CQTCLL
Trigger: AAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp ATGCAAGAGGCCCAGCTTTTCTCTGGGCAACCTCTTTaGAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTT +
Preference number: 3 (lower is better)
Translates to: MQEAQLFSGQPL*KVLFPVPHALL
Trigger: AAGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAAAGCTGGGCCTCTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp TGCTCTGTGGTCACAACATCCACACTGGCTGGCATTTaGGCATTAGATGTAGTGTACACACAGCCATTGCAG +
Preference number: 3 (lower is better)
Translates to: CSVVTTSTLAGI*ALDVVYTQPLQ
Trigger: CTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTTGTGACCACAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp ACAATCCTGCTCTGTGGTCACAACATCCACACTGGCTaGCATTTGGGCATTAGATGTAGTGTACACACAGCC +
Preference number: 3 (lower is better)
Translates to: TILLCGHNIHTG*HLGIRCSVHTA
Trigger: GGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTTGTGACCACAGAGCAGGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATGGGTGTTTAAACCTTaGGCAGAGCATCCCTTTGGG +
Preference number: 3 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEWVFKP*AEHPFG
Trigger: CCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCCA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAAGTGAAGGGCTTTATTaGAGGACAGAATCACCCAGA +
Preference number: 3 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSEGLY*RTESPR
Trigger: TCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCACT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTAGAAGGCCCCAATGTTaGAAAGTGGTTCTAATCCTG +
Preference number: 3 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPRRPQC*KVVLIL
Trigger: CAGGATTAGAACCACTTTCAAACATTGGGGCCTTCT...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp TCAGTGAATGGTGGTTCTTGTTGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCAGCTTGGCCAGAGTCT +
Preference number: 3 (lower is better)
Translates to: SVNGGSCCIWCQ*HFRRSSAWPES
Trigger: AGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACCATATGCAACAAGAACCACCATTCACTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GTTAGCATGATTTGTTCTGAATCATCTCAGGCCACGTaGCATGCCTGTGAGGACAAACATCAGGCCAAGAAG +
Preference number: 3 (lower is better)
Translates to: VSMICSESSQAT*HACEDKHQAKK
Trigger: CTTCTTGGCCTGATGTTTGTCCTCACAGGCATGCCACGTGGCCTGAGATGATTCAGAACAAATCATGCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp AAAAGAGTGATCTGGGATCCCAAGGACGCTTCCTTCTaGCTGATTTCTAGTGTAATTCAGTCTAGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: KRVIWDPKDASF*LISSVIQSSQG
Trigger: GCCCTGGCTAGACTGAATTACACTAGAAATCAGCCAGAAGGAAGCGTCCTTGGGATCCCAGATCACTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CAA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTAGTGAAGGGCTTTATTaGAGGACAGAATCACCCAGA +
Preference number: 3 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSEGLY*RTESPR
Trigger: TCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCACT...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCACACTGGCTGGCATTaGGGCATTAGATGTAGTGTA +
Preference number: 3 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLHTGWH*GIRCSV
Trigger: TACACTACATCTAATGCCCAAATGCCAGCCAGTGTG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTGAAATGACCTCTTACTaGTGGCCCCACAAAAGTCCT +
Preference number: 3 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAEMTSY*WPHKSP
Trigger: AGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTC...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTCTGGGCAACCTCTTaGAAAGGTTCTATTCCCTGT +
Preference number: 3 (lower is better)
Translates to: QPPEAECLCITYIKQPFSLWATS*KGSIPC
Trigger: ACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGAATGGTGGTTCTTGTaGCATATGGTGCCAGTGACA +
Preference number: 3 (lower is better)
Translates to: QPPEAECLCITYIKQPFSEWWFL*HMVPVT
Trigger: TGTCACTGGCACCATATGCAACAAGAACCACCATTC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTGGGTGTTTAAACCTTaGGCAGAGCATCCCTTTGGG +
Preference number: 3 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTWVFKP*AEHPFG
Trigger: CCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCCA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGCACACTGGCTGGCATTaGGGCATTAGATGTAGTGTA +
Preference number: 3 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWHTGWH*GIRCSV
Trigger: TACACTACATCTAATGCCCAAATGCCAGCCAGTGTG...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAAGAAGGCCCCAATGTTaGAAAGTGGTTCTAATCCTG +
Preference number: 3 (lower is better)
Translates to: TGSVISSPTGDFLSFGPERRPQC*KVVLIL
Trigger: CAGGATTAGAACCACTTTCAAACATTGGGGCCTTCT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTCCAAACTGGGACCTTTaGTCAGATGCTCTGTTCACC +
Preference number: 3 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTPNWDL*SDALFT
Trigger: GGTGAACAGAGCATCTGACAAAAGGTCCCAGTTTGG...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp GGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTaGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTT +
Preference number: 3 (lower is better)
Translates to: GQHFVPNVPPCL*VSESDRGWHVL
Trigger: AAGAACATGCCAACCTCTGTCAGATTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTG +
Preference number: 3 (lower is better)
Translates to: LNMPRCFVAAESTANLSLVYTQP*QAPSTV
Trigger: CACTGTACTTGGGGCCTGCAATGGCTGTGTGTACAC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR-3UTR CAA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCTCAAAGATTCTAGATaGCTCTGGGTTCTCTTTTGT +
Preference number: 3 (lower is better)
Translates to: LQPPEAECLCITYIKQPFLKDSR*LWVLFC
Trigger: ACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGAG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp AAACAAGAATGGCCGTCTCGATGGTCTTTGTGTACATaGCCATCCTTGGTTCTAAGCATCACGAATGGCTTC +
Preference number: 3 (lower is better)
Translates to: KQEWPSRWSLCT*PSLVLSITNGF
Trigger: GAAGCCATTCGTGATGCTTAGAACCAAGGATGGTCATGTACACAAAGACCATCGAGACGGCCATTCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR GCA 72 bp CTGTTCCCCATGCCTTGCTTAAAAACTGACTGGAAGTaGTCAACTCTCCTGTTTAAAGGTCTGAGTCCATTC +
Preference number: 3 (lower is better)
Translates to: LFPMPCLKTDWK*STLLFKGLSPF
Trigger: GAATGGACTCAGACCTTTAAACAGGAGAGTTGAGCACTTCCAGTCAGTTTTTAAGCAAGGCATGGGGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGT +
Preference number: 3 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSESYQRL*LRRPQC
Trigger: ACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACT...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACTCAAAGATTCTAGATaGCTCTGGGTTCTCTTTTGT +
Preference number: 3 (lower is better)
Translates to: TGSVISSPTGDFLSFGPELKDSR*LWVLFC
Trigger: ACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGAG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp TCATTTGCAAGTGGCTGGATGGATTCAAAGTTAGCATaGTTTGTTCTGAATCATCTCAGGCCACGTGGCATG +
Preference number: 3 (lower is better)
Translates to: SFASGWMDSKLA*FVLNHLRPRGM
Trigger: CATGCCACGTGGCCTGAGATGATTCAGAACAAATCATGCTAACTTTGAATCCATCCAGCCACTTGCAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp GTGGACATCCAACCATATCATAAAACACAGGCTCTGTaGTTTCATCCCCAACTGGCGATTTCCTTTCATTTG +
Preference number: 3 (lower is better)
Translates to: VDIQPYHKTQAL*FHPQLAISFHL
Trigger: CAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGATGTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGAAATGACCTCTTACTaGTGGCCCCACAAAAGTCCT +
Preference number: 3 (lower is better)
Translates to: LNMPRCFVAAESTANLSLEMTSY*WPHKSP
Trigger: AGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR TCA 72 bp AGCTCTTATTTATATAAACAAAAGTGGGCCATCAGCTaGGGAGTAGCTCTAAAGCCAATGCACAATCCTGCT +
Preference number: 3 (lower is better)
Translates to: SSYLYKQKWAIS*GVALKPMHNPA
Trigger: AGCAGGATTGTGCATTGGCTTTAGAGCTACTCCTCAGCTGATGGCCCACTTTTGTTTATATAAATAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGT +
Preference number: 3 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSSYQRL*LRRPQC
Trigger: ACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACT...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR-3UTR CAA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGT +
Preference number: 3 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYSYQRL*LRRPQC
Trigger: ACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACT...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp TTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTaGAATAGTTTCACCACCTTCGATGATAATTTTAAA +
Preference number: 3 (lower is better)
Translates to: FIPNWRFPFIWA*NSFTTFDDNFK
Trigger: TTTAAAATTATCATCGAAGGTGGTGAAACTATTTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR TCA 72 bp TTGAGGATTAATCAATTAAAGTGCAATTCCAAATGTTaGGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: LRINQLKCNSKC*AFQMRLGYCSA
Trigger: TGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACATTTGGAATTGCACTTTAATTGATTAATCCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CCA 72 bp ATCCTGGCTATGATCATTAGTAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTATATAAACAAAAGTGG +
Preference number: 3 (lower is better)
Translates to: ILAMIISKHVCR*GRSSYLYKQKW
Trigger: CCACTTTTGTTTATATAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTTACTAATGATCATAGCCAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCCAGACACCGCCTCTaGGGGGCAGCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDPRHRL*GAAQGL
Trigger: CAGCCCCTGGGCTGCCCCTCAGAGGCGGTGTCTGGG...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGCTGGGCCCGCTGCTCTaGCTGGGCGAGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKLGPLL*LGELGL
Trigger: CAGGCCCAGCTCGCCCAGGCAGAGCAGCGGGCCCAG...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCGTTGGACCTCCCCCTaGTGGACTTCCAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDRWTSP*WTSSCA
Trigger: GGCGCAGCTGGAAGTCCATCAGGGGGAGGTCCAACG...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCCAGGCGCTCCAGGCTaGCCCGGGCATCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSPGAPG*PGHPLS
Trigger: TGAAAGAGGATGCCCGGGCCAGCCTGGAGCGCCTGG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCGCCCTCTCGCTCCCTTaGGGCTGCCTCTTTGGCGTC +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAALSLP*GCLFGV
Trigger: GACGCCAAAGAGGCAGCCTCAAGGGAGCGAGAGGGC...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCTCTCCTCCTGCAGTaGCCCTTCACGCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDPLLLQ*PFTLRA
Trigger: TGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAGG...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTTTGGCCCGGTGCAGCTaGTCTTGCAGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSLARCS*SCSSAC
Trigger: GCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAA...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGTGGGCGAGCTGGGCCTaGAGGCCAGGCAGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLWASWA*RPGSEP
Trigger: CGGCTCACTGCCTGGCCTGCAGGCCCAGCTCGCCCA...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACAGGCTCTGGGCCCGCTaGTCTGCCTGGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDRLWAR*SAWASW
Trigger: CCAGCTCGCCCAGGCAGAGCAGCGGGCCCAGAGCCT...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGCTTCCTCAGCAGCCTaGAGCTGCCGGCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAASSAA*SCRPCS
Trigger: GGAGCAAGGCCGGCAGCTGCAGGCTGCTGAGGAAGC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGGCTCAGTCTCCAACATaGAGGGCCCTGGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEAQSPT*RALVGQ
Trigger: CTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGC...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACGGTTTCCCAGACCCTTaGTGGCCCCGACAGACGCCT +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDGFPDP*WPRQTP
Trigger: AGGCGTCTGTCGGGGCCAGCAAGGGTCTGGGAAACC...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGGTGGCACGCGCTCGTaGGTCCACCGCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIGGTRS*VHRRAE
Trigger: TTCTGCCCGGCGGTGGACCCACGAGCGCGTGCCACC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACTCCCAGGAGCTCGTGTaGGCCAGCAACTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDSQELV*ASNSCS
Trigger: GCTGCAGGAGTTGCTGGCCCACACGAGCTCCTGGGA...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGCTTCTCACCTGCCACTaGCAGTTCTGGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAELLTCH*QFWARR
Trigger: CCGCCTGGCCCAGAACTGCCAGTGGCAGGTGAGAAG...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTAGCTGGGTCTGCTGCTaGCACTGGCTCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSSWVCC*HWLSRA
Trigger: GGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCT...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTGGCCTCCTGTGGCCTaGGGCCCAGGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKWPPVA*GPGEAG
Trigger: ACCAGCCTCACCTGGGCCCCAGGCCACAGGAGGCCA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTCCTCCCGCAGCTGCTaGCACTCGCCCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKSSRSC*HSPSLL
Trigger: GAGCAAGGAGGGCGAGTGTCAGCAGCTGCGGGAGGA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTACTTCCAGCTGCGCCTaGGACAGGGCTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSATSSCA*DRASWA
Trigger: TGCCCAGCTAGCCCTGTCTCAGGCGCAGCTGGAAGT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCGTTGGACCTCCCCCTaGTGGACTTCCAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRRWTSP*WTSSCA
Trigger: GGCGCAGCTGGAAGTCCATCAGGGGGAGGTCCAACG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACTTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDFPRST*GRHSLR
Trigger: CCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAA...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTCCTGTGCCAAGGGCTaGAGCATGGACTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSASCAKG*SMDSSR
Trigger: GCGGCTGGAGTCCATGCTGCAGCCCTTGGCACAGGA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTGGGCCAGCAACTCCTaGAGCCGTCGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPWASNS*SRRQSW
Trigger: CCAGCTCTGGCGACGGCTGCAGGAGTTGCTGGCCCA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTCGGCCTGCAGGGCTTaGAGCTTGCCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKSACRA*SLPSRS
Trigger: GCTCCTGGAGGGCAAGCTGCAAGCCCTGCAGGCCGA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGGCCAGTTGCTGGCACTaGTCCACCTCCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKASCWH*STSSRS
Trigger: GCTGCGGGAGGAGGTGGAGCAGTGCCAGCAACTGGC...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGGGACGGCCTCAGCCATaGTTAGCTGGCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEGRPQP*LAGSAP
Trigger: AGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCC...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTGGGCGAGCTGGGCCTaGAGGCCAGGCAGTGAGCCG +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSWASWA*RPGSEP
Trigger: CGGCTCACTGCCTGGCCTGCAGGCCCAGCTCGCCCA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCCTGGGCCCGCTGCTCTaGCTGGGCGAGCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFLGPLL*LGELGL
Trigger: CAGGCCCAGCTCGCCCAGGCAGAGCAGCGGGCCCAG...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTCAGCAGCCTGCAGCTaGCGGCCTTGCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSASAACS*RPCSSS
Trigger: GCTTGAGGAGCAAGGCCGGCAGCTGCAGGCTGCTGA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACGGTAGCTGGAGGAACTaGCGGGCCCAGCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDGSWRN*RAQLSD
Trigger: ATCTGAGAGCTGGGCCCGGCAGTTCCTCCAGCTACC...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTAGTGGTCAGACTCCATaGTGGCACGCGCTCGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSSGQTP*WHALVG
Trigger: ACCCACGAGCGCGTGCCACCATGGAGTCTGACCACT...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCCTCGGAGCTGCATTTaGCCTGGGACAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSPRSCI*PGTAPP
Trigger: AGGAGGAGCTGTCCCAGGCCAAATGCAGCTCCGAGG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSHAGPW*GRAENL
Trigger: GAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCAGCTACCAAGCAAGTaGGGCGAACGTTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSQLPSK*GERCPP
Trigger: CGGAGGACAACGTTCGCCTCACTTGCTTGGTAGCTG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCGGCCCTTTGTGTCTaGTGCCGTATCTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDPALCV*CRICLL
Trigger: CAGAAGGCAGATACGGCATCAGACACAAAGGGCCGG...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGGGCCTTTCTCTGCTGTaGGGACCTCAATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEGLSLL*GPQSAG
Trigger: CCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCC...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTTGTCCAGCTGCTGCATaGGCTCCCGTAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSCPAAA*APVAAS
Trigger: AGAAGCAGCTACGGGAGCGCATGCAGCAGCTGGACA...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCGGCCTCAAGCTCCTGTaGCAAGGGCTGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAGLKLL*QGLQHG
Trigger: TCCATGCTGCAGCCCTTGGCACAGGAGCTTGAGGCC...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTTTCTCCCCTAGCTCCTaGATCTCCTGGGCCGCATCA +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSFSPSS*ISWAAS
Trigger: TGATGCGGCCCAGGAGATGCAGGAGCTAGGGGAGAA...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGAGCTCCCTGTTGGCCTaGCGGAGCTCTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRSSLLA*RSSSSW
Trigger: CCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCT...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGCCAGTTGCTGGCACTaGTCCACCTCCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSASCWH*STSSRS
Trigger: GCTGCGGGAGGAGGTGGAGCAGTGCCAGCAACTGGC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGCCCTAAGCTCTCTGTaGCGGGCTTCTGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAALSSL*RASASC
Trigger: GCAACTGGCAGAAGCCCGGCACAGAGAGCTTAGGGC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGCTTCCTCAGCAGCCTaGAGCTGCCGGCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVASSAA*SCRPCS
Trigger: GGAGCAAGGCCGGCAGCTGCAGGCTGCTGAGGAAGC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGGCTGATGGTGAGGCCTaGCTCGGCCACAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKADGEA*LGHSDG
Trigger: CCCATCACTGTGGCCGAGGCAGGCCTCACCATCAGC...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGTCCCGCACCTCCAACTaGTCCAGCTCTAGTCGCATC +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAESRTSN*SSSSRI
Trigger: GATGCGACTAGAGCTGGACCAGTTGGAGGTGCGGGA...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCCAGACAACTCCTCCTaGAGTGGGGCCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSPDNSS*SGAISF
Trigger: GAAGGAGATGGCCCCACTCCAGGAGGAGTTGTCTGG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTGCCACTGGCAGTTCTaGGCCAGGCGGCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDCHWQF*ARRPSK
Trigger: CTTGCTGGGCCGCCTGGCCCAGAACTGCCAGTGGCA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTCCAAGGAGCCCTGGATaGCTGATTCCCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAPRSPG*LIPAAA
Trigger: TGCAGCAGCGGGAATCAGCCATCCAGGGCTCCTTGG...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTTTGAGGCTGCCTCTTTaGCGTCCTGGAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSLRLPL*RPGAPG
Trigger: TCCAGGAGCTCCAGGACGCCAAAGAGGCAGCCTCAA...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACTGTCCTTCCTCAGCATaGCCGCCTGGCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDCPSSA*PPGTLQ
Trigger: TTGCAGAGTGCCAGGCGGCCATGCTGAGGAAGGACA...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTGGCCTCCTGTGGCCTaGGGCCCAGGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSWPPVA*GPGEAG
Trigger: ACCAGCCTCACCTGGGCCCCAGGCCACAGGAGGCCA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGGTGTCCTCGGCCTCCTaGAAGACCACACTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEVSSAS*KTTLKE
Trigger: CTCCTTCAGTGTGGTCTTCCAGGAGGCCGAGGACAC...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGCAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEQHAGP*WGRAEN
Trigger: ATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTG...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSQHAGP*WGRAEN
Trigger: ATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGCCAAGAAGAGTCGCTaGGGGCCTGGCCACCTCTAT +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAAKKSR*GPGHLY
Trigger: ATAGAGGTGGCCAGGCCCCCAGCGACTCTTCTTGGC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACTCCCTTTCTAGGGCTTaGAGCTTCTCCCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDSLSRA*SFSPSS
Trigger: GGAGCTAGGGGAGAAGCTTCAAGCCCTAGAAAGGGA...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAATCCTCCCGCAGCTGCTaGCACTCGCCCTCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQSSRSC*HSPSLL
Trigger: GAGCAAGGAGGGCGAGTGTCAGCAGCTGCGGGAGGA...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTCCCTGGCTAGTGCCTaGGCCACTGCTATCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPSLASA*ATAIRG
Trigger: TCCCCTGATAGCAGTGGCTCAGGCACTAGCCAGGGA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGGGCAGCCCAGGGGCTaGGTTGATGATTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAGQPRG*VDDFGA
Trigger: TGCTCCAAAATCATCAACTCAGCCCCTGGGCTGCCC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCCCAGACACCGCCTCTaGGGGGCAGCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLPRHRL*GAAQGL
Trigger: CAGCCCCTGGGCTGCCCCTCAGAGGCGGTGTCTGGG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPFPRST*GRHSLR
Trigger: CCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGCTTAGGGCAATGCTTTaGGCTGTGGAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAELRAML*AVERSG
Trigger: GCCAGACCTCTCCACAGCTCAAAGCATTGCCCTAAG...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTAGGTCTGGTGTGGGCTaGGCAGTGGGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPRSGVG*AVGSGQ
Trigger: TTGCCCACTTCCCACTGCTCAGCCCACACCAGACCT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGAAGAACCTGGGGCCTaGCTGCAGGCAGCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSEEPGA*LQAAGS
Trigger: GGAACCAGCTGCCTGCAGTCAGGCCCCAGGTTCTTC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTTGGCCTGGAGTCCCTaGCCCATTCTCAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTALAWSP*PILKPS
Trigger: TGAGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAA...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCCCTCGGTGGCTGTCTaGTCAGCAGTGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRPSVAV*SAVVRL
Trigger: GAGTCTGACCACTGCTGAGCAGACAGCCACCGAGGG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGCCAGAGCTGGTCTaGCTCCTGTCCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRSPELV*LLSLPR
Trigger: TCTGGGAAGGGACAGGAGGCAGACCAGCTCTGGCGA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGGCAGGGCTTGCAGCTTaGCCTCCAGGAGCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRAGLAA*PPGAGY
Trigger: GTAACCAGCTCCTGGAGGGCAAGCTGCAAGCCCTGC...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACCGGGCTTCTGCCAGTTaGTGGCACTGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDRASAS*WHCSTS
Trigger: GGAGGTGGAGCAGTGCCAGCAACTGGCAGAAGCCCG...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGTGCTTCCTCGGAGCTaGATTTGGCCTGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAVLPRS*IWPGTA
Trigger: AGCTGTCCCAGGCCAAATGCAGCTCCGAGGAAGCAC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTGCAGCTGCCGGCCTTaGTCCTCAAGCTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQCSCRP*SSSWPL
Trigger: CAGGGGCCAGCTTGAGGAGCAAGGCCGGCAGCTGCA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGGTAGCTGGAGGAACTaGCGGGCCCAGCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPGSWRN*RAQLSD
Trigger: ATCTGAGAGCTGGGCCCGGCAGTTCCTCCAGCTACC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGGCTTGGGTATTGCTCTaGAGCCACCAGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEAWVLL*SHQRQS
Trigger: ACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGC...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCTGTCTGCTCAGCAGTaGTCAGACTCCATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSLSAQQ*SDSMVA
Trigger: TGCCACCATGGAGTCTGACCACTGCTGAGCAGACAG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGCCAAGGGCTGCAGCATaGACTCCAGCCGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEPRAAA*TPAAAG
Trigger: CCCTGCGGCGGCTGGAGTCCATGCTGCAGCCCTTGG...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTAGGTCACTCACATGTTaGCTCACCTGTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSRSLTC*LTCASW
Trigger: CCAGCTGGCACAGGTGAGCCAACATGTGAGTGACCT...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGAGGCCAAGGAGCCCTaGATGGCTGATTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSEAKEP*MADSRC
Trigger: GCAGCGGGAATCAGCCATCCAGGGCTCCTTGGCCTC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGAGGCCAAGGAGCCCTaGATGGCTGATTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVEAKEP*MADSRC
Trigger: GCAGCGGGAATCAGCCATCCAGGGCTCCTTGGCCTC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCCAAGTGCCGGATGCTaGCCTGCTCGGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGPSAGC*PARPPG
Trigger: CCCTGGAGGCCGAGCAGGCCAGCATCCGGCACTTGG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTTGAGGCTGCCTCTTTaGCGTCCTGGAGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSALRLPL*RPGAPG
Trigger: TCCAGGAGCTCCAGGACGCCAAAGAGGCAGCCTCAA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTCCTTGCTCCTCAAGCTaGCCCCTGAGGCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPPCSSS*PLRLLH
Trigger: GTGCAAGAGCCTCAGGGGCCAGCTTGAGGAGCAAGG...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTCCACATATCCTGCAGTaGTGCCGCCGCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPPHILQ*CRRTIQ
Trigger: CTGGATGGTGCGGCGGCACCACTGCAGGATATGTGG...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGTGGCCTCCTGTGGCCTaGGGCCCAGGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWWPPVA*GPGEAG
Trigger: ACCAGCCTCACCTGGGCCCCAGGCCACAGGAGGCCA...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTCTGTATTTGCTCCTTaGCCTCCTGTGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTASVFAP*PPVAWG
Trigger: GCCCCAGGCCACAGGAGGCCAAGGAGCAAATACAGA...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTCTGTATTTGCTCCTTaGCCTCCTGTGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSASVFAP*PPVAWG
Trigger: GCCCCAGGCCACAGGAGGCCAAGGAGCAAATACAGA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTTGGTGGAGGCCATGGTaGGTTTGCCTTTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSWWRPW*VCLSCL
Trigger: CAGACAAGAAAGGCAAACTCACCATGGCCTCCACCA...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTGGAGGTCCACCACCTaGGCCTGCAGCCGTTGGACC +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAWRSTT*ACSRWT
Trigger: GGTCCAACGGCTGCAGGCTCAGGTGGTGGACCTCCA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTGGAGGTCCACCACCTaGGCCTGCAGCCGTTGGACC +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEWRSTT*ACSRWT
Trigger: GGTCCAACGGCTGCAGGCTCAGGTGGTGGACCTCCA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGCCGCACCATCCAGCTaGACTCCCGCTTACAGTCGA +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIAAPSS*TPAYSR
Trigger: TCGACTGTAAGCGGGAGTTCAGCTGGATGGTGCGGC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTCTGCCTCGGCCACAGTaGTGGGGATCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSLPRPQ*WGSGCR
Trigger: CCTACAGCCTGATCCCCATCACTGTGGCCGAGGCAG...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGGCATCCCTTTGGGTGTaGCAACAGCTGAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEASLWV*QQLSLY
Trigger: GTAGAGACTCAGCTGTTGTCACACCCAAAGGGATGC...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCCCCTCCAACACTGCTaGGTTCTGGAGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIPLQHC*VLEQPP
Trigger: TGGAGGCTGCTCCAGAACTCAGCAGTGTTGGAGGGG...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGAGTAGTCCTTCTTGTTaGCCAGGAGGGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAESSPSC*PGGWPS
Trigger: AGAAGGCCACCCTCCTGGGCAACAAGAAGGACTACT...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCATGCGCTCCCGTAGCTaGTTCTCCCGCACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVMRSRS*FSRTSN
Trigger: GTTGGAGGTGCGGGAGAAGCAGCTACGGGAGCGCAT...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTGCAGTTGCTCCCCTTaGTGGCTGACAGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSICSCSP*WLTAAL
Trigger: GAGGGCAGCTGTCAGCCAGCAAGGGGAGCAACTGCA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGGCCTCAAGCTCCTGTaGCAAGGGCTGCAGCATGGA +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSGLKLL*QGLQHG
Trigger: TCCATGCTGCAGCCCTTGGCACAGGAGCTTGAGGCC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGCACCCAAGTGCCGGATaGTGGCCTGCTCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEHPSAG*WPARPP
Trigger: TGGAGGCCGAGCAGGCCAGCATCCGGCACTTGGGTG...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCACCCAAGTGCCGGATaGTGGCCTGCTCGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPHPSAG*WPARPP
Trigger: TGGAGGCCGAGCAGGCCAGCATCCGGCACTTGGGTG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGGACGGCCTCAGCCATaGTTAGCTGGCTCTGCACCT +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDGRPQP*LAGSAP
Trigger: AGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTCTTGCAGCTCAGCGTaGTCCAGCTGTGCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKSCSSA*SSCASS
Trigger: CGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTTGGCCCGGTGCAGCTaGTCTTGCAGCTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSLARCS*SCSSAC
Trigger: GCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGCTTCTCTCCCATGTCTaGTTGGGTGGCCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAELLSHV*LGGLQL
Trigger: AAGCTGAAGGCCACCCAAGCAGACATGGGAGAGAAG...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTAGGGCATCTGACTTCTaGCAGAGAGCATCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSRASDF*QRASLS
Trigger: GGACAAGGATGCTCTCTGGCAGAAGTCAGATGCCCT...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCAGATTTCCGAATCCTaGCCCACGGGCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSQISES*PTGMSS
Trigger: TGAAGACATGCCCGTGGGGCAGGATTCGGAAATCTG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGGGCCAGAAAGAGAGTaGAGCTTAGAGGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPGPERE*SLEAPP
Trigger: TGGAGGGGCCTCTAAGCTGCACTCTCTTTCTGGCCC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTCCCACTGCTTCTaGAGCTCAGCTACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSTSHCF*SSATKQ
Trigger: TTGCTTGGTAGCTGAGCTCCAGAAGCAGTGGGAGGT...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCCTTCTGCTGAGCCATaGCTAGCCAGCCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIPSAEP*LASLGS
Trigger: GCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGG...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCCAGGCGCTCCAGGCTaGCCCGGGCATCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSPGAPG*PGHPLS
Trigger: TGAAAGAGGATGCCCGGGCCAGCCTGGAGCGCCTGG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTCACCTGTGCCAGCTaGGTCTCCAGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSILTCAS*VSRNCS
Trigger: GCTGCAGTTCCTGGAGACCCAGCTGGCACAGGTGAG...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTGCCACTGGCAGTTCTaGGCCAGGCGGCCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFCHWQF*ARRPSK
Trigger: CTTGCTGGGCCGCCTGGCCCAGAACTGCCAGTGGCA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTCTCCAGCTCCCTGTTaGCCTGCCGGAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDSPAPC*PAGALP
Trigger: AGGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTAGGACCTCAATCAGCTaGGTCTGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPRTSIS*VCCWHW
Trigger: CCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGGGCTTCATTGTCAGTaGGTGGGCCAACTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAGLHCQ*VGQLPV
Trigger: AACAGGGAGTTGGCCCACCCACTGACAATGAAGCCC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAGGGCTGCCCGCATCTTaGCCTGGAGGTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQGLPAS*PGGPPP
Trigger: AGGTGGTGGACCTCCAGGCCAAGATGCGGGCAGCCC...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCCTCGGAGCTGCATTTaGCCTGGGACAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVPRSCI*PGTAPP
Trigger: AGGAGGAGCTGTCCCAGGCCAAATGCAGCTCCGAGG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGCAGCTGTGTCTGTGTTaGCCCGGTGCAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKQLCLC*PGAAAL
Trigger: AAGAGCAGCTGCACCGGGCCAACACAGACACAGCTG...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAGCGTCCTGGAGCTCCTaGACAGCACAGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEASWSS*TAQASA
Trigger: GGCACTGGCCTGTGCTGTCCAGGAGCTCCAGGACGC...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGCCTCTTTGGCGTCCTaGAGCTCCTGGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDASLAS*SSWTAQ
Trigger: CTGTGCTGTCCAGGAGCTCCAGGACGCCAAAGAGGC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTGCAGCCCAGCTACTTaGCGCTCCAGGCCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSCSPAT*RSRPSR
Trigger: GCGAGAGGGCCTGGAGCGCCAAGTAGCTGGGCTGCA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTACCTTGAGCTGGCCCTaGATGTTCTCCTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSATLSWP*MFSLWE
Trigger: CTCCCACAAGGAGAACATCCAGGGCCAGCTCAAGGT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGGGCAAATGGGCTGTTaGGGAACCTGTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVGQMGC*GTCQEG
Trigger: CCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTCTGAGCAGTGGGAAGTaGGCAAATGGGCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPLSSGK*ANGLLG
Trigger: CCCCAACAGCCCATTTGCCCACTTCCCACTGCTCAG...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGGGTCTCTGTTGGACTTaGCCTGGAGTCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKGLCWT*PGVPDP
Trigger: TGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACC...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGAGTCGCTGGGGGCCTaGCCACCTCTATTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDESLGA*PPLFQY
Trigger: GTACTGGAATAGAGGTGGCCAGGCCCCCAGCGACTC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGCCAAGAAGAGTCGCTaGGGGCCTGGCCACCTCTAT +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIAKKSR*GPGHLY
Trigger: ATAGAGGTGGCCAGGCCCCCAGCGACTCTTCTTGGC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCTGGAGGAGTGGTTCTaGGTAAGCTGCAACCGGTCC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRLEEWF*VSCNRS
Trigger: GGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCGCTCTCCTGGAGGAGTaGTTCTGGGTAAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAALLEE*FWVSCN
Trigger: GTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGC...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTGTCTTTGCCTGCTCTTaGTCCAGTCCACCTGGAATC +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSVFACS*SSPPGI
Trigger: GATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGAC...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTGGTGGAGGCCATGGTaGGTTTGCCTTTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAWWRPW*VCLSCL
Trigger: CAGACAAGAAAGGCAAACTCACCATGGCCTCCACCA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTGGTGCTGTCATCCGTaGTGGGTTCCCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIWCCHP*WVPLLP
Trigger: AGGAAGCAGGGGAACCCATCACGGATGACAGCACCA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCAGCTACCAAGCAAGTaGGGCGAACGTTGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSQLPSK*GERCPP
Trigger: CGGAGGACAACGTTCGCCTCACTTGCTTGGTAGCTG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTCTGGGTGGCCTGGGTaGCCTCCCACTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQASGWPG*PPTASG
Trigger: TCCAGAAGCAGTGGGAGGTCACCCAGGCCACCCAGA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGTCTGGGTGGCCTGGGTaGCCTCCCACTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWSGWPG*PPTASG
Trigger: TCCAGAAGCAGTGGGAGGTCACCCAGGCCACCCAGA...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTCACTCTGCTGTCTGTTaGCCTCCTCGACCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPHSAVC*PPRPWF
Trigger: GAACCAAGGTCGAGGAGGTCAACAGACAGCAGAGTG...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTACCCACCTGCTGGCTaGGGTGGTCTTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRYPPAG*GGLCPE
Trigger: TTCAGGACAAAGACCACCTCAGCCAGCAGGTGGGTA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGAGCATCCTTGTCCCTaGGCAGCTCTATCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVEHPCP*AALSAA
Trigger: AGCGGCTGATAGAGCTGCTCAGGGACAAGGATGCTC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACATCTCTCCTCAGCACTaGGCTTCTGCTGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDISPQH*ASAGIP
Trigger: TGGAATTCCAGCAGAAGCTCAGTGCTGAGGAGAGAT...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTCCCTGGCTAGTGCCTaGGCCACTGCTATCAGGGGA +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQSLASA*ATAIRG
Trigger: TCCCCTGATAGCAGTGGCTCAGGCACTAGCCAGGGA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTATCGGGTCGTGGGAATaGGGACCTTACACTGATCCA +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAIGSWE*GPYTDP
Trigger: TGGATCAGTGTAAGGTCCTCATTCCCACGACCCGAT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACGGGTGTGCGAACCTTaGGCTGGCCCTGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQRVCEP*AGPGCS
Trigger: AGAACATCCAGGGCCAGCTCAAGGTTCGCACACCCG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTAGGTATTGTCGAAGATaGGCATGTAGATGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSRYCRR*ACRCRV
Trigger: CACCCGGCATCTACATGCTCATCTTCGACAATACCT...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGGCCGGTGCAGAGTGCTaGGCACAAAGTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWAGAEC*AQSPPQ
Trigger: CTGGGGAGGACTTTGTGCTCAGCACTCTGCACCGGC...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGCCGGTGCAGAGTGCTaGGCACAAAGTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEAGAEC*AQSPPQ
Trigger: CTGGGGAGGACTTTGTGCTCAGCACTCTGCACCGGC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSINHPCP*NSPQEA
Trigger: GGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATT...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSNHPCP*NSPQEA
Trigger: GGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATT...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGGTCTGGTGTGGGCTaGGCAGTGGGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQRSGVG*AVGSGQ
Trigger: TTGCCCACTTCCCACTGCTCAGCCCACACCAGACCT...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACATCCCTGCAAGCAGATaGTTCACAGAGCAGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDIPASR*FTEQVS
Trigger: GGAAACCTGCTCTGTGAATCATCTGCTTGCAGGGAT...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535325.5
CDS-3UTR GCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTTGCTGGCTGACAGCTaGCCTCAGCTCCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVLLADS*PQLLVL
Trigger: GAGAACCAGGAGCTGAGGGCAGCTGTCAGCCAGCAA...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTGCAGGGCTTGCAGCTTaGCCTCCAGGAGCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSAGLAA*PPGAGY
Trigger: GTAACCAGCTCCTGGAGGGCAAGCTGCAAGCCCTGC...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTCTGTGCCGGGCTTCTaGCAGTTGCTGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSSVPGF*QLLALL
Trigger: GAGCAGTGCCAGCAACTGGCAGAAGCCCGGCACAGA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTCACGCTCCGAGCATTaGAGCAGCTCCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSISRSEH*SSSWTW
Trigger: CCATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGGCCGCCTGGCACTCTaGAAGATGGTTGCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIGRLAL*KMVASA
Trigger: TGCACTAGCAACCATCTTGCAGAGTGCCAGGCGGCC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGTCGAGGCAGTGGTTTaGCTCTGTGTCTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIVEAVV*LCVSEP
Trigger: TGGCTCGGAGACACAGAGGCAAACCACTGCCTCGAC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCGCTGATGGTGAGGCCTaGCTCGGCCACAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAADGEA*LGHSDG
Trigger: CCCATCACTGTGGCCGAGGCAGGCCTCACCATCAGC...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAGCTCAGTCTCCAACATaGAGGGCCCTGGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEAQSPT*RALVGQ
Trigger: CTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGC...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCAGTTCCCGTGTCTTTaGCTGCTCTTGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRQFPCL*LLLVQS
Trigger: GGACTGGACCAAGAGCAGGCAAAGACACGGGAACTG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTGTATGTCTCCTGCCTaGGTCCAGAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRCMSPA*VQRKAQ
Trigger: CTGAGCCTTCCTCTGGACCCAGGCAGGAGACATACA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGCCTCCTGGCAAATGTTaGCCAGGCAGCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKPPGKC*PGSIQV
Trigger: GACTTGGATGCTGCCTGGCCAACATTTGCCAGGAGG...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTCCAGTGAGTCCCGTGTaGCCTCAAGCTCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSPVSPV*PQAPVP
Trigger: TGGCACAGGAGCTTGAGGCCACACGGGACTCACTGG...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGCTCACCTGTGCCAGCTaGGTCTCCAGGAACTGCAGC +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQLTCAS*VSRNCS
Trigger: GCTGCAGTTCCTGGAGACCCAGCTGGCACAGGTGAG...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACTGCCCTCTTGCACCTTaGTATCGTCTAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDCPLAP*YRLTVP
Trigger: AGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCA...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTTGCCCTCCAGGAGCTaGTTACGCCCGACCACATTC +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVLPSRS*LRPTTF
Trigger: GAATGTGGTCGGGCGTAACCAGCTCCTGGAGGGCAA...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACAAGCTCGCCTCCATCTaGTCACCCAAGTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDKLASI*SPKCRM
Trigger: CATCCGGCACTTGGGTGACCAGATGGAGGCGAGCTT...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTAGCTGGGTCTGCTGCTaGCACTGGCTCTCGAGAGCC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSWVCC*HWLSRA
Trigger: GGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCT...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGGGCCAACTCCCTGTTaGCCTTTCTCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDGPTPC*PFSAVR
Trigger: CCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTTCATTGTCAGTGGGTaGGCCAACTCCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRFIVSG*ANSLLA
Trigger: GGCCAACAGGGAGTTGGCCCACCCACTGACAATGAA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTCAGCCATGCTTAGCTaGCTCTGCACCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPSAMLS*LCTLSW
Trigger: CCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGAGGGTGTTGAGCTCCTaGTGTGCAGCCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLRVLSS*CAASWR
Trigger: CCTCCAAGAGGCTGCACACCAGGAGCTCAACACCCT...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCAGGGTGTTGAGCTCCTaGTGTGCAGCCTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIRVLSS*CAASWR
Trigger: CCTCCAAGAGGCTGCACACCAGGAGCTCAACACCCT...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCCTTCACTGAGCTTCTaGAAACAGGCTCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRPSLSF*KQARQQ
Trigger: CTGCTGCCGAGCCTGTTTCCAGAAGCTCAGTGAAGG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTGGATGTTCTCCTTGTaGGAGTTGCATCGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAWMFSL*ELHRVV
Trigger: CACGACCCGATGCAACTCCCACAAGGAGAACATCCA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQHAGPW*GRAENL
Trigger: GAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCAACATGCAGGGCCCTaGTGGGGCAGGGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVQHAGP*WGRAEN
Trigger: ATTTTCTGCCCTGCCCCACCAGGGCCCTGCATGTTG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCAGCCTCCAGCTTACTaGGGCAGTGAGGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIQPPAY*GSEGQE
Trigger: CTCTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTG...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGCTGCTGGTGTGTGGTaGGTTTGGGGTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDAAGVW*VWGLCW
Trigger: CCAACAGAGACCCCAAACCCACCACACACCAGCAGC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTGAGTCGCTGGGGGCCTaGCCACCTCTATTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSESLGA*PPLFQY
Trigger: GTACTGGAATAGAGGTGGCCAGGCCCCCAGCGACTC...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGTCTTTGCCTGCTCTTaGTCCAGTCCACCTGGAATC +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAVFACS*SSPPGI
Trigger: GATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGAC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTCCGGCCCTTTGTGTCTaGTGCCGTATCTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSPALCV*CRICLL
Trigger: CAGAAGGCAGATACGGCATCAGACACAAAGGGCCGG...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGTCAGCTGAAGCTCCTTaGCCAGCTGTTCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLSAEAP*PAVPVG
Trigger: CCCAACTGGAACAGCTGGTCAAGGAGCTTCAGCTGA...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTCAGCTGAAGCTCCTTaGCCAGCTGTTCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDSAEAP*PAVPVG
Trigger: CCCAACTGGAACAGCTGGTCAAGGAGCTTCAGCTGA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCATCTCTCCTCAGCACTaGGCTTCTGCTGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAISPQH*ASAGIP
Trigger: TGGAATTCCAGCAGAAGCTCAGTGCTGAGGAGAGAT...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCTGCCTCGGCCACAGTaGTGGGGATCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFLPRPQ*WGSGCR
Trigger: CCTACAGCCTGATCCCCATCACTGTGGCCGAGGCAG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCCTGGAAGACCACACTaGAGGAGATGCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVPGRPH*RRCSWG
Trigger: ACCCCAAGAGCATCTCCTTCAGTGTGGTCTTCCAGG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCCTGGAAGACCACACTaGAGGAGATGCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSPGRPH*RRCSWG
Trigger: ACCCCAAGAGCATCTCCTTCAGTGTGGTCTTCCAGG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGATCGGGTCGTGGGAATaGGGACCTTACACTGATCCA +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRIGSWE*GPYTDP
Trigger: TGGATCAGTGTAAGGTCCTCATTCCCACGACCCGAT...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACCCAGACACCGCCTCTaGGGGGCAGCCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSPRHRL*GAAQGL
Trigger: CAGCCCCTGGGCTGCCCCTCAGAGGCGGTGTCTGGG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTTTCCCAGGAGTACCTaGGGGCGTCACAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEFPRST*GRHSLR
Trigger: CCTCAGGCTGTGACGCCCTCAGGTACTCCTGGGAAA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGTGGCACCGACTCGCATaGTGGCTGTGTACCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLWHRLA*WLCTSF
Trigger: AAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCA...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCCCCTCCAACACTGCTaGGTTCTGGAGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSPLQHC*VLEQPP
Trigger: TGGAGGCTGCTCCAGAACTCAGCAGTGTTGGAGGGG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTAGGTCTGGTGTGGGCTaGGCAGTGGGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGRSGVG*AVGSGQ
Trigger: TTGCCCACTTCCCACTGCTCAGCCCACACCAGACCT...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTTGGCCTGGAGTCCCTaGCCCATTCTCAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSLAWSP*PILKPS
Trigger: TGAGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCCTCTTTGTTGGTGGTaGGGTTGTGGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVPLCWW*GCGCWC
Trigger: ACACCAGCAGCCACAACCTCACCACCAACAAAGAGG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCCTCTTTGTTGGTGGTaGGGTTGTGGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSPLCWW*GCGCWC
Trigger: ACACCAGCAGCCACAACCTCACCACCAACAAAGAGG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTCCTCTGCTGTGGAGTaGCATGTTCAGGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPSSAVE*HVQEGP
Trigger: AGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTGTCTGTATGTCTCCTaGCTGGGTCCAGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDCLYVS*LGPEEG
Trigger: GCCTTCCTCTGGACCCAGGCAGGAGACATACAGACA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTAGTAGTCCTTCTTGTTaGCCAGGAGGGTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPSSPSC*PGGWPS
Trigger: AGAAGGCCACCCTCCTGGGCAACAAGAAGGACTACT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGAGTCTGCAGGTAGCTaGTCACCAAGCTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIESAGS*SPSCSC
Trigger: GCATGAGCAGCTTGGTGAGCAGCTACCTGCAGACTC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGATGCGCTCCCGTAGCTaGTTCTCCCGCACCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEMRSRS*FSRTSN
Trigger: GTTGGAGGTGCGGGAGAAGCAGCTACGGGAGCGCAT...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTCTCTGTCCAGCTGCTaGATGCGCTCCCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFSLSSC*MRSRSC
Trigger: GCAGCTACGGGAGCGCATGCAGCAGCTGGACAGAGA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTCGAGCATACCCACCTaGTGGCTGAGGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSISSIPT*WLRWSL
Trigger: CAAAGACCACCTCAGCCAGCAGGTGGGTATGCTCGA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTCTAACTGTGCCTCCTaGAGGCCCCTCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSNCAS*RPLCSS
Trigger: GGAGGAGCAGAGGGGCCTGCAGGAGGCACAGTTAGA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGACACTCGCCCTCCTTaGTCTGTAGAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVDTRPP*SVEWPP
Trigger: AGGAGGCCATTCTACAGAGCAAGGAGGGCGAGTGTC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTCTGTGCCGGGCTTCTaGCAGTTGCTGGCACTGCTC +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSSVPGF*QLLALL
Trigger: GAGCAGTGCCAGCAACTGGCAGAAGCCCGGCACAGA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGCCCTAAGCTCTCTGTaGCGGGCTTCTGCCAGTTGC +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPALSSL*RASASC
Trigger: GCAACTGGCAGAAGCCCGGCACAGAGAGCTTAGGGC...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTATCAGCTGGGTCTGCTaGTGGCACTGGCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSISWVC*WHWLSR
Trigger: TCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGAT...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTGCACAAGGGTTTTGTaGTCCCTCAGGACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSICTRVL*SLRTAS
Trigger: TGAGGCCGTCCTGAGGGAGCACAAAACCCTTGTGCA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTGCTCCTTCAGCTGCTaGACAAGGGTTTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRCSFSC*TRVLCS
Trigger: GGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCCTCTCCTCCTGCAGTaGCCCTTCACGCTCCGAGCA +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFPLLLQ*PFTLRA
Trigger: TGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAGG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAGCGTGCTCCAGCTGTaGTTCCTCGGAGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVSVLQL*FLGAAF
Trigger: AAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCT...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCGGTGCAGCTGCTCTTaGAGCTCAGCGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFRCSCS*SSACSS
Trigger: GCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTTGCAGCTGCCGGCCTTaGTCCTCAAGCTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSCSCRP*SSSWPL
Trigger: CAGGGGCCAGCTTGAGGAGCAAGGCCGGCAGCTGCA...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGCCAGGGCTACCACCTaGAGCAGTGGTTCTTCAATT +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPARATT*SSGSSI
Trigger: AATTGAAGAACCACTGCTGCAGGTGGTAGCCCTGGC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCTGTCTGCTCAGCAGTaGTCAGACTCCATGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVLSAQQ*SDSMVA
Trigger: TGCCACCATGGAGTCTGACCACTGCTGAGCAGACAG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTGGCTCCTTTCACCTTaGCCAGGCAGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSWLLSP*PGRHRS
Trigger: ACTTCTGTGCCTGCCTGGCCAAGGTGAAAGGAGCCA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCCTCCTGGCAAATGTTaGCCAGGCAGCATCCAAGTC +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVPPGKC*PGSIQV
Trigger: GACTTGGATGCTGCCTGGCCAACATTTGCCAGGAGG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTGGTCAGCGTCCTCCTaGCAAATGTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSWSASS*QMLARQ
Trigger: CTGCCTGGCCAACATTTGCCAGGAGGACGCTGACCA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTAAGCAGAAGAGCCAGTaGTCAGCGTCCTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSKQKSQ*SASSWQ
Trigger: TTGCCAGGAGGACGCTGACCACTGGCTCTTCTGCTT...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCGTGTTCTGGGTGGCCTaGGTGACCTCCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSVFWVA*VTSHCF
Trigger: GAAGCAGTGGGAGGTCACCCAGGCCACCCAGAACAC...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGCCAGCCTGGGAAGCTaGCTAAATGCTGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAASLGS*LNAGFS
Trigger: AGAAAAACCAGCATTTAGCCAGCTTCCCAGGCTGGC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTCTCCAGCTCCCTGTTaGCCTGCCGGAGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFSPAPC*PAGALP
Trigger: AGGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGGGCCAACTCCCTGTTaGCCTTTCTCTGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSGPTPC*PFSAVR
Trigger: CCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCC...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGAGCAGCTCCTGGACATaGGCTCTGTTAAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKSSSWT*ALLRAS
Trigger: TGAAGCCCTTAACAGAGCCCATGTCCAGGAGCTGCT...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACAGCTGTGTCTGTGTTaGCCCGGTGCAGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQQLCLC*PGAAAL
Trigger: AAGAGCAGCTGCACCGGGCCAACACAGACACAGCTG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGCGTCCTGGAGCTCCTaGACAGCACAGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEASWSS*TAQASA
Trigger: GGCACTGGCCTGTGCTGTCCAGGAGCTCCAGGACGC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGCCTCTTTGGCGTCCTaGAGCTCCTGGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPASLAS*SSWTAQ
Trigger: CTGTGCTGTCCAGGAGCTCCAGGACGCCAAAGAGGC...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATGGTGTGCAGCCTCTTaGAGGCTCTGGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEWCAAS*RLWARC
Trigger: GCAGCGGGCCCAGAGCCTCCAAGAGGCTGCACACCA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTCTCAGCATGGCCGCCTaGCACTCTGCAAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSLSMAA*HSARWL
Trigger: CAACCATCTTGCAGAGTGCCAGGCGGCCATGCTGAG...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGCACTGAGCTTCTGCTaGAATTCCAGGGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPALSFC*NSRASD
Trigger: GTCAGATGCCCTGGAATTCCAGCAGAAGCTCAGTGC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCCACATATCCTGCAGTaGTGCCGCCGCACCATCCAG +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSPHILQ*CRRTIQ
Trigger: CTGGATGGTGCGGCGGCACCACTGCAGGATATGTGG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCCTTCACTGAGCTTCTaGAAACAGGCTCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIPSLSF*KQARQQ
Trigger: CTGCTGCCGAGCCTGTTTCCAGAAGCTCAGTGAAGG...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTCAGGCTGTAGGTGCTaGACCTCACAAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDSGCRC*TSQTAP
Trigger: GGGAGCTGTTTGTGAGGTCCAGCACCTACAGCCTGA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTGGATGTTCTCCTTGTaGGAGTTGCATCGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKWMFSL*ELHRVV
Trigger: CACGACCCGATGCAACTCCCACAAGGAGAACATCCA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGTGCGAACCTTGAGCTaGCCCTGGATGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVVRTLS*PWMFSL
Trigger: CAAGGAGAACATCCAGGGCCAGCTCAAGGTTCGCAC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCATGCAGGGCCCTGGTaGGGCAGGGCAGAAAATCTC +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSHAGPW*GRAENL
Trigger: GAGATTTTCTGCCCTGCCCCACCAGGGCCCTGCATG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGGGGCAAATGGGCTGTTaGGGAACCTGTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWGQMGC*GTCQEG
Trigger: CCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCC...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGTGGGAAGTGGGCAAATaGGCTGTTGGGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLWEVGK*AVGEPV
Trigger: GACAGGTTCCCCAACAGCCCATTTGCCCACTTCCCA...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSTHGRT*GLTAGS
Trigger: GCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGT...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVETHGRT*GLTAGS
Trigger: GCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGT...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTGCTCTGTTCACCCATaGAAGAACCTGGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSICSVHP*KNLGPD
Trigger: GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTGGTCTCTGTTGGACTTaGCCTGGAGTCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSGLCWT*PGVPDP
Trigger: TGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACC...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGTTTGGGGTCTCTGTTaGACTTGGCCTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDVWGLC*TWPGVP
Trigger: AGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTTGGTGGTGAGGTTGTaGCTGCTGGTGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQLVVRL*LLVCGG
Trigger: CCCACCACACACCAGCAGCCACAACCTCACCACCAA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGGAGTCCACTTGGACCTaGAGGACAACACTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRESTWT*RTTLCA
Trigger: GGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTC...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGGTCTTTGCCTGCTCTTaGTCCAGTCCACCTGGAATC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRVFACS*SSPPGI
Trigger: GATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGAC...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATTCCCAGACCCTTGCTaGCCCCGACAGACGCCTGTT +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEFPDPC*PRQTPV
Trigger: AACAGGCGTCTGTCGGGGCCAGCAAGGGTCTGGGAA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535325.5
3UTR CAA 72 bp TGCTCTCTCCCTCACCCCTGGCCAAACTGGGACCTTTaGTCAGATGCTCTGTTCACCCATGGAAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: CSLPHPWPNWDL*SDALFTHGRTW
Trigger: CCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTTGGCCAGGGGTGAGGGAGAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp GACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTaGGTGGTGAGGTTGTGGCTGCTGGTGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: DLLLVAPQKSSL*VVRLWLLVCGG
Trigger: CCCACCACACACCAGCAGCCACAACCTCACCACCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACGGTTCCCCTGCTTCCTaGAATTCTTTGCTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDGSPAS*NSLLSS
Trigger: AGAACTAAGCAAAGAATTTCAGGAAGCAGGGGAACC...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTCCCTTTCTAGGGCTTaGAGCTTCTCCCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSSLSRA*SFSPSS
Trigger: GGAGCTAGGGGAGAAGCTTCAAGCCCTAGAAAGGGA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGCACTCTGCTGTCTGTTaGCCTCCTCGACCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQHSAVC*PPRPWF
Trigger: GAACCAAGGTCGAGGAGGTCAACAGACAGCAGAGTG...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGGCATCCTCTTTCAGCTaGAGCTCCTTGACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLASSFS*SSLTSC
Trigger: ACAGCTGGTCAAGGAGCTTCAGCTGAAAGAGGATGC...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGGTCTTTGTCCTGAATaGGCTGCTTCTTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPGLCPE*AASSAP
Trigger: AGGAGCAGAAGAAGCAGCTCATTCAGGACAAAGACC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCGGCCTTTCTCTGCTGTaGGGACCTCAATCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAGLSLL*GPQSAG
Trigger: CCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCC...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAATCCCTGGCTAGTGCCTaGGCCACTGCTATCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSESLASA*ATAIRG
Trigger: TCCCCTGATAGCAGTGGCTCAGGCACTAGCCAGGGA...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCGCTTTATGTGACAGGTaGGGAAGAGCAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAALCDR*GRAVFP
Trigger: AGGAAACACTGCTCTTCCTCACCTGTCACATAAAGC...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCGGGCAGCCCAGGGGCTaGGTTGATGATTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSGQPRG*VDDFGA
Trigger: TGCTCCAAAATCATCAACTCAGCCCCTGGGCTGCCC...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACTTAGGGCAATGCTTTaGGCTGTGGAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQLRAML*AVERSG
Trigger: GCCAGACCTCTCCACAGCTCAAAGCATTGCCCTAAG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGTGGGCCATCAGCTaGGGAGTAGCTCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVKWAIS*GVALKP
Trigger: TGGCTTTAGAGCTACTCCTCAGCTGATGGCCCACTT...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTTGGCCTGGAGTCCCTaGCCCATTCTCAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQALAWSP*PILKPS
Trigger: TGAGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTGCCTTGCTTAAAAACTaGCTGGAAGTGCTCAACTCT +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSALLKN*LEVLNS
Trigger: AGAGTTGAGCACTTCCAGTCAGTTTTTAAGCAAGGC...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACTGTTATTCAGAGAGATaGGCCATCAAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDCYSER*AIKGLP
Trigger: GGGCAGCCCCTTGATGGCTCATCTCTCTGAATAACA...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTGGAATCCAGTGTGTTaGGGTCAAGCACTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAWNPVC*GQALCR
Trigger: TCTACAGAGTGCTTGACCTCAACACACTGGATTCCA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGAAAACACAGGCTCTGTaGTTTCATCCCCAACTGGCG +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKKTQAL*FHPQLA
Trigger: CGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTT...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAACTGGAGCTGGCTCTCTaGATTGGTGGAGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQLELAL*IGGGHG
Trigger: ACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAG...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTTGCTGGCTGACAGCTaGCCTCAGCTCCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVELLADS*PQLLVL
Trigger: GAGAACCAGGAGCTGAGGGCAGCTGTCAGCCAGCAA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATTCTCCCCTAGCTCCTaGATCTCCTGGGCCGCATCA +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEFSPSS*ISWAAS
Trigger: TGATGCGGCCCAGGAGATGCAGGAGCTAGGGGAGAA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTAGCTCCCTGTTGGCCTaGCGGAGCTCTTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLASSLLA*RSSSSW
Trigger: CCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCT...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTCACGCTCCGAGCATTaGAGCAGCTCCTGGACATGG +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQASRSEH*SSSWTW
Trigger: CCATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCTCTCCTTCTCTTGCTaGAGCCCAGCTACTTGGCGC +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWLSFSC*SPATWR
Trigger: GCGCCAAGTAGCTGGGCTGCAGCAAGAGAAGGAGAG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGAAGCTCTCCTTCTCTTaGTGCAGCCCAGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLKLSFS*CSPATW
Trigger: CCAAGTAGCTGGGCTGCAGCAAGAGAAGGAGAGCTT...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTAGGCTCTGGGCCCGCTaGTCTGCCTGGGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFRLWAR*SAWASW
Trigger: CCAGCTCGCCCAGGCAGAGCAGCGGGCCCAGAGCCT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCACAAACAGCTCCCTaGTACCCTCCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVESQTAP*YPPRSW
Trigger: CCAGCTTCGGGGAGGGTAGCAGGGAGCTGTTTGTGA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGCTAAGAGTGGCCGGTaGAGAGTGCTGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSAKSGR*RVLSTK
Trigger: CTTTGTGCTCAGCACTCTGCACCGGCCACTCTTAGC...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGCTCAGTCTCCAACATaGAGGGCCCTGGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSAQSPT*RALVGQ
Trigger: CTGCCCCACCAGGGCCCTGCATGTTGGAGACTGAGC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGTGTACACACAGCCATTaGAGGCCCCAAGTACAGTGG +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLCTHSH*RPQVQW
Trigger: CCACTGTACTTGGGGCCTGCAATGGCTGTGTGTACA...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGAGGACAACACTTTGTaGCAAACGTGCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAEDNTL*QTCLLV
Trigger: AACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGGTGGCACGCGCTCGTaGGTCCACCGCCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFGGTRS*VHRRAE
Trigger: TTCTGCCCGGCGGTGGACCCACGAGCGCGTGCCACC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAATTTCGGCCCTCGGTaGCTGTCTGCTCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLENFGPR*LSAQQW
Trigger: CCACTGCTGAGCAGACAGCCACCGAGGGCCGAAATT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATCCTTCACAGTGTTCTaGGTGGCCTGGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSFTVF*VAWVTS
Trigger: GGAGGTCACCCAGGCCACCCAGAACACTGTGAAGGA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACCAGTGAGTCCCGTGTaGCCTCAAGCTCCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEPVSPV*PQAPVP
Trigger: TGGCACAGGAGCTTGAGGCCACACGGGACTCACTGG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCACCAGCTGTTCCAGTTaGGCACTCTGCTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSITSCSS*ALCCLL
Trigger: CAACAGACAGCAGAGTGCCCAACTGGAACAGCTGGT...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTAGCATACCCACCTGCTaGCTGAGGTGGTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSSIPTC*LRWSLS
Trigger: GGACAAAGACCACCTCAGCCAGCAGGTGGGTATGCT...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCTTTCATGGCCTCCTTaGCCTTCCTTACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVLSWPP*PSLQPA
Trigger: TGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCAGGACCTCAATCAGCTaGGTCTGCTGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFRTSIS*VCCWHW
Trigger: CCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCT...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTGGGCTTCATTGTCAGTaGGTGGGCCAACTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSGLHCQ*VGQLPV
Trigger: AACAGGGAGTTGGCCCACCCACTGACAATGAAGCCC...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGTCAGTGCGCAAACCTaGATGCCCAGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFVSAQT*MPSSAV
Trigger: CACAGCTGAGCTGGGCATCCAGGTTTGCGCACTGAC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTCCATGTCTGCTTGGGTaGCCTTCAGCTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSPCLLG*PSASPQ
Trigger: CTGTGGAGAAGCTGAAGGCCACCCAAGCAGACATGG...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTGTCCTTCCTCAGCATaGCCGCCTGGCACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFCPSSA*PPGTLQ
Trigger: TTGCAGAGTGCCAGGCGGCCATGCTGAGGAAGGACA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGGCACTGAGCTTCTGCTaGAATTCCAGGGCATCTGAC +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLALSFC*NSRASD
Trigger: GTCAGATGCCCTGGAATTCCAGCAGAAGCTCAGTGC...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTCCTTCACTGAGCTTCTaGAAACAGGCTCGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSPSLSF*KQARQQ
Trigger: CTGCTGCCGAGCCTGTTTCCAGAAGCTCAGTGAAGG...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCGTGTCCTCGGCCTCCTaGAAGACCACACTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSVSSAS*KTTLKE
Trigger: CTCCTTCAGTGTGGTCTTCCAGGAGGCCGAGGACAC...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAGTGTCCTCGGCCTCCTaGAAGACCACACTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQVSSAS*KTTLKE
Trigger: CTCCTTCAGTGTGGTCTTCCAGGAGGCCGAGGACAC...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGGATTCACAGGGCATaGCCAGTGCACCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLERIHRA*PVHPAQ
Trigger: CTGAGCTGGGTGCACTGGCCATGCCCTGTGAATCCT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACAGGCCCCAAGTACAGTaGGTTTTGCTCTTGGATTAT +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDRPQVQ*VLLLDY
Trigger: ATAATCCAAGAGCAAAACCCACTGTACTTGGGGCCT...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACACACTGGCTGGCATTTaGGCATTAGATGTAGTGTAC +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDTLAGI*ALDVVY
Trigger: GTACACTACATCTAATGCCCAAATGCCAGCCAGTGT...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCTGAGCAGTGGGAAGTaGGCAAATGGGCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQALSSGK*ANGLLG
Trigger: CCCCAACAGCCCATTTGCCCACTTCCCACTGCTCAG...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGTGTGGGCTGAGCAGTaGGAAGTGGGCAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFVWAEQ*EVGKWA
Trigger: AGCCCATTTGCCCACTTCCCACTGCTCAGCCCACAC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAATGCTCTGTTCACCCATaGAAGAACCTGGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQCSVHP*KNLGPD
Trigger: GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCA...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACCACCCCTGGCCAAACTaGGACCTTTTGTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDHPWPN*DLLSDA
Trigger: AGCATCTGACAAAAGGTCCCAGTTTGGCCAGGGGTG...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTCTCTCCCTCACCCCTaGCCAAACTGGGACCTTTTG +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSSLPHP*PNWDLL
Trigger: CAAAAGGTCCCAGTTTGGCCAGGGGTGAGGGAGAGA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTGGTGTGTGGTGGGTTTaGGGTCTCTGTTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSGVWWV*GLCWTW
Trigger: CCAAGTCCAACAGAGACCCCAAACCCACCACACACC...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCGCTGCTGGTGTGTGGTaGGTTTGGGGTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAAAGVW*VWGLCW
Trigger: CCAACAGAGACCCCAAACCCACCACACACCAGCAGC...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGAGAAGGTCATCAGCTTaGCCAGAGTCTCCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRRRSSA*PESPQY
Trigger: ATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCT...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGCTGGAGGAGTGGTTCTaGGTAAGCTGCAACCGGTCC +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVELEEWF*VSCNRS
Trigger: GGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAG...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGGTTTTTCTTGTCCAGTaGGTCCCGTGTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQVFLVQ*VPCGLK
Trigger: CTTGAGGCCACACGGGACTCACTGGACAAGAAAAAC...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTACCCACCTGCTGGCTaGGGTGGTCTTTGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEYPPAG*GGLCPE
Trigger: TTCAGGACAAAGACCACCTCAGCCAGCAGGTGGGTA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGACTTCCAGCTGCGCCTaGGACAGGGCTAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWTSSCA*DRASWA
Trigger: TGCCCAGCTAGCCCTGTCTCAGGCGCAGCTGGAAGT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGCCGCACCATCCAGCTaGACTCCCGCTTACAGTCGA +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSAAPSS*TPAYSR
Trigger: TCGACTGTAAGCGGGAGTTCAGCTGGATGGTGCGGC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACCTGGAAGACCACACTaGAGGAGATGCTCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEPGRPH*RRCSWG
Trigger: ACCCCAAGAGCATCTCCTTCAGTGTGGTCTTCCAGG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTATGAGGACCTTACACTaGTCCAGCGGTGTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPMRTLH*SSGVSS
Trigger: CGAGGACACACCGCTGGATCAGTGTAAGGTCCTCAT...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCGGGTGTGCGAACCTTaGGCTGGCCCTGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSRVCEP*AGPGCS
Trigger: AGAACATCCAGGGCCAGCTCAAGGTTCGCACACCCG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTCGGGTGTGCGAACCTTaGGCTGGCCCTGGATGTTCT +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLARVCEP*AGPGCS
Trigger: AGAACATCCAGGGCCAGCTCAAGGTTCGCACACCCG...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTAATGGAAACATTGCCTaGGCCCTTCAACGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSNGNIA*ALQRLG
Trigger: CCCGAGGCGTTGAAGGGCTCAGGCAATGTTTCCATT...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTAATCACCCCTGCCCGTaGAACTCTCCACAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFNHPCP*NSPQEA
Trigger: GGCCTCTTGTGGAGAGTTTCACGGGCAGGGGTGATT...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTCCCCTCCAACACTGCTaGGTTCTGGAGCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAPLQHC*VLEQPP
Trigger: TGGAGGCTGCTCCAGAACTCAGCAGTGTTGGAGGGG...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSRQLVP*TRDEEL
Trigger: CAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCT...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACAGTCCATTCCAGAAATaGCCTCTTACTTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDSPFQK*PLTCGP
Trigger: GGGGCCACAAGTAAGAGGTCATTTCTGGAATGGACT...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCACGTGGCATGCCTGTaGGGACAAACATCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGHVACL*GQTSGQ
Trigger: TTGGCCTGATGTTTGTCCTCACAGGCATGCCACGTG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTCCATTAGCTACTCAGTaGATGGTGGTTCTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAPLATQ*MVVLVA
Trigger: TGCAACAAGAACCACCATTCACTGAGTAGCTAATGG...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTGTTATTCAGAGAGATaGGCCATCAAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSCYSER*AIKGLP
Trigger: GGGCAGCCCCTTGATGGCTCATCTCTCTGAATAACA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCAAAACACAGGCTCTGTaGTTTCATCCCCAACTGGCG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIKTQAL*FHPQLA
Trigger: CGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTT...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTAATTCCCAACACCTCTaGGCCAAGGACAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPNSQHL*AKDSFL
Trigger: CAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAATT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTGTCTGTATGTCTCCTaGCTGGGTCCAGAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGCLYVS*LGPEEG
Trigger: GCCTTCCTCTGGACCCAGGCAGGAGACATACAGACA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGGTGTTCATGAAGCACTaGTGTAAGGTGTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRVFMKH*CKVSAN
Trigger: GTTGGCAGACACCTTACAGCAGTGCTTCATGAACAC...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTCTCTCTGTCTGCAGTTaGTCCCCTTGCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSLSVCS*SPCWLT
Trigger: TGTCAGCCAGCAAGGGGAGCAACTGCAGACAGAGAG...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCTCTCTGTCTGCAGTTaGTCCCCTTGCTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQALSVCS*SPCWLT
Trigger: TGTCAGCCAGCAAGGGGAGCAACTGCAGACAGAGAG...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCAGTTGGGCACTCTaGTGTCTGTTGACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVESSWAL*CLLTSS
Trigger: CGAGGAGGTCAACAGACAGCAGAGTGCCCAACTGGA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTTCGCCAGAGCTGGTCTaGCTCCTGTCCCTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSSPELV*LLSLPR
Trigger: TCTGGGAAGGGACAGGAGGCAGACCAGCTCTGGCGA...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTTCGAGCATACCCACCTaGTGGCTGAGGTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSSSIPT*WLRWSL
Trigger: CAAAGACCACCTCAGCCAGCAGGTGGGTATGCTCGA...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCTCATTCTTCTCACCTaGCACTGGCAGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGLILLT*HWQFWA
Trigger: GGCCCAGAACTGCCAGTGGCAGGTGAGAAGAATGAG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTCCTGGCTGCCCTCTTaGACCTTGGTATCGTCTAAC +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSSWLPS*TLVSSN
Trigger: GTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAATGGCCTCCTTCTCTaGCATCTGGGCTTTCATGGC +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQNGLLL*HLGFHG
Trigger: GCCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATT...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCGACACTCGCCCTCCTTaGTCTGTAGAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQADTRPP*SVEWPP
Trigger: AGGAGGCCATTCTACAGAGCAAGGAGGGCGAGTGTC...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAAGCGTGCTCCAGCTGTaGTTCCTCGGAGCTGCATTT +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSVLQL*FLGAAF
Trigger: AAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCTCTCCTTCTCTTGCTaGAGCCCAGCTACTTGGCGC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFLSFSC*SPATWR
Trigger: GCGCCAAGTAGCTGGGCTGCAGCAAGAGAAGGAGAG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACTTCTCTCCCATGTCTaGTTGGGTGGCCTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQLLSHV*LGGLQL
Trigger: AAGCTGAAGGCCACCCAAGCAGACATGGGAGAGAAG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCAGTAGTAACAGAAGATaGGGCCACATATCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTASSNRR*GHISCS
Trigger: ACTGCAGGATATGTGGCCGCATCTTCTGTTACTACT...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCACAAACAGCTCCCTaGTACCCTCCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSQTAP*YPPRSW
Trigger: CCAGCTTCGGGGAGGGTAGCAGGGAGCTGTTTGTGA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGGATCAGGCTGTAGGTaGTGGACCTCACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSGSGCR*WTSQTA
Trigger: AGCTGTTTGTGAGGTCCAGCACCTACAGCCTGATCC...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGGGCCAGAAAGAGAGTaGAGCTTAGAGGCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFGPERE*SLEAPP
Trigger: TGGAGGGGCCTCTAAGCTGCACTCTCTTTCTGGCCC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGCCAATGCACAATCCTaGTCTGTGGTCACAACATCC +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSANAQS*SVVTTS
Trigger: GGATGTTGTGACCACAGAGCAGGATTGTGCATTGGC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATCTGCCAGAAGAGGCTaGTCCAAGGAAGCCGAATGC +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSARRG*SKEAEC
Trigger: GCATTCGGCTTCCTTGGAGCAGCCTCTTCTGGCAGA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSSRVFA*SWSSPP
Trigger: AGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCCAGTTCCCGTGTCTTTaGCTGCTCTTGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFQFPCL*LLLVQS
Trigger: GGACTGGACCAAGAGCAGGCAAAGACACGGGAACTG...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACAGTTCCCGTGTCTTTaGCTGCTCTTGGTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEQFPCL*LLLVQS
Trigger: GGACTGGACCAAGAGCAGGCAAAGACACGGGAACTG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTGGCTCCTTTCACCTTaGCCAGGCAGGCACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGWLLSP*PGRHRS
Trigger: ACTTCTGTGCCTGCCTGGCCAAGGTGAAAGGAGCCA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGTCCGAGCTCAGCTTTaGCTGCAGAAAGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEVRAQL*LQKGAS
Trigger: AGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGAC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTGGTCAGCGTCCTCCTaGCAAATGTTGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFWSASS*QMLARQ
Trigger: CTGCCTGGCCAACATTTGCCAGGAGGACGCTGACCA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTGTGTTCTGGGTGGCCTaGGTGACCTCCCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAVFWVA*VTSHCF
Trigger: GAAGCAGTGGGAGGTCACCCAGGCCACCCAGAACAC...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCAGCTCCTGCATCTCCTaGGCCGCATCACTGGGAATA +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSSSCIS*AASLGI
Trigger: TATTCCCAGTGATGCGGCCCAGGAGATGCAGGAGCT...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGAGCTCCTGCATCTCCTaGGCCGCATCACTGGGAATA +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWSSCIS*AASLGI
Trigger: TATTCCCAGTGATGCGGCCCAGGAGATGCAGGAGCT...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACCAGACAACTCCTCCTaGAGTGGGGCCATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEPDNSS*SGAISF
Trigger: GAAGGAGATGGCCCCACTCCAGGAGGAGTTGTCTGG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACCAAGGAGCCCTGGATaGCTGATTCCCGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEPRSPG*LIPAAA
Trigger: TGCAGCAGCGGGAATCAGCCATCCAGGGCTCCTTGG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGCCATCTGGGCTTTCATaGCCTCCTTGGCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQPSGLS*PPWPSL
Trigger: TAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGG...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCCTTGCTCTGTAGAATaGCCTCCTTCTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSPCSVE*PPSLPS
Trigger: AGATGGCAGAGAAGGAGGCCATTCTACAGAGCAAGG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTCAGCCATGCTTAGCTaGCTCTGCACCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPSAMLS*LCTLSW
Trigger: CCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTATTTCAGCACTCAGCTaGAACTTGAGGGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPISALS*NLRVLS
Trigger: GCTCAACACCCTCAAGTTCCAGCTGAGTGCTGAAAT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCCTTGCTCCTCAAGCTaGCCCCTGAGGCTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLPCSSS*PLRLLH
Trigger: GTGCAAGAGCCTCAGGGGCCAGCTTGAGGAGCAAGG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTCTCCCATGTCTGCTTaGGTGGCCTTCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQASPMSA*VAFSFS
Trigger: GGAGAAGCTGAAGGCCACCCAAGCAGACATGGGAGA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAATGGCACTCTGCAAGATaGTTGCTAGTGCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQWHSAR*LLVQLS
Trigger: GCTGAGCTGCACTAGCAACCATCTTGCAGAGTGCCA...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAATTACAGTCGAGGCAGTaGTTTGCCTCTGTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQLQSRQ*FASVSP
Trigger: CGGAGACACAGAGGCAAACCACTGCCTCGACTGTAA...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGTATTTGCTCCTTaGCCTCCTGTGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSVFAP*PPVAWG
Trigger: GCCCCAGGCCACAGGAGGCCAAGGAGCAAATACAGA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCCGGACTCCTGTATCTaGCACAATTCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSPDSCI*HNSSSV
Trigger: CACAGATGAGGAATTGTGCCAGATACAGGAGTCCGG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTCAGGCTGTAGGTGCTaGACCTCACAAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSGCRC*TSQTAP
Trigger: GGGAGCTGTTTGTGAGGTCCAGCACCTACAGCCTGA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGGGTGTTTAAACCTTTaGCAGAGCATCCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPGCLNL*QSIPLG
Trigger: ACCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGAGGCTGATGGTCTCCTaGGTGTTTAAACCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKRLMVS*VFKPLA
Trigger: TGCCAAAGGTTTAAACACCCAGGAGACCATCAGCCT...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCACAATCCTGCTCTGTaGTCACAACATCCACACTGG +
Preference number: 4 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIHNPAL*SQHPHW
Trigger: CCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTG...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATGGGAAGTGGGCAAATaGGCTGTTGGGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQWEVGK*AVGEPV
Trigger: GACAGGTTCCCCAACAGCCCATTTGCCCACTTCCCA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTGGGAAGTGGGCAAATaGGCTGTTGGGGAACCTGTC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGWEVGK*AVGEPV
Trigger: GACAGGTTCCCCAACAGCCCATTTGCCCACTTCCCA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCTGACTGCAGGCAGCTaGTTCCATGAACAAGGGACG +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPLTAGS*FHEQGT
Trigger: CGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGGTGTGTGGTGGGTTTaGGGTCTCTGTTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFGVWWV*GLCWTW
Trigger: CCAAGTCCAACAGAGACCCCAAACCCACCACACACC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTGGTGTGTGGTGGGTTTaGGGTCTCTGTTGGACTTGG +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSGVWWV*GLCWTW
Trigger: CCAAGTCCAACAGAGACCCCAAACCCACCACACACC...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGCTGCTGGTGTGTGGTaGGTTTGGGGTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFAAGVW*VWGLCW
Trigger: CCAACAGAGACCCCAAACCCACCACACACCAGCAGC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTGAGTCGCTGGGGGCCTaGCCACCTCTATTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAESLGA*PPLFQY
Trigger: GTACTGGAATAGAGGTGGCCAGGCCCCCAGCGACTC...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGGAAGGACCTCAGATaGAATGTCCCAGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQRKDLR*NVPGPK
Trigger: TTTGGGGCCTGGGACATTCCATCTGAGGTCCTTCCT...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAACCGGTCCTCTGCTGTaGAGTGACATGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQTGPLL*SDMFRK
Trigger: CTTCCTGAACATGTCACTCCACAGCAGAGGACCGGT...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTCTGTAGAGTCCACTTaGACCTGGAGGACAACACTT +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKSVEST*TWRTTL
Trigger: AAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTGATTTCATCCCCAACTaGCGATTTCCTTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSDFIPN*RFPFIW
Trigger: CCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATC...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCAGATAAGAATGAATTaGGGTCCCAGACCCACCATC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRQIRMN*GPRPTI
Trigger: GATGGTGGGTCTGGGACCCCAATTCATTCTTATCTG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCTTGCAAGTCTCGGATaGTTCTCTGGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSLASLG*FSGAGS
Trigger: AGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGCTTGCAAGTCTCGGATaGTTCTCTGGAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVELASLG*FSGAGS
Trigger: AGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAG...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTTGGTGCTGTCATCCGTaGTGGGTTCCCCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLWCCHP*WVPLLP
Trigger: AGGAAGCAGGGGAACCCATCACGGATGACAGCACCA...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGCTCCCCTTGCTGGCTaGCAGCTGCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFAPLAG*QLPSAP
Trigger: AGGAGCTGAGGGCAGCTGTCAGCCAGCAAGGGGAGC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCGCATCCTCTTTCAGCTaGAGCTCCTTGACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSASSFS*SSLTSC
Trigger: ACAGCTGGTCAAGGAGCTTCAGCTGAAAGAGGATGC...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGGTGGTCTTTGTCCTaGATGAGCTGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQRWSLS*MSCFFC
Trigger: GCAGAAGAAGCAGCTCATTCAGGACAAAGACCACCT...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGAGCATCCTTGTCCCTaGGCAGCTCTATCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSEHPCP*AALSAA
Trigger: AGCGGCTGATAGAGCTGCTCAGGGACAAGGATGCTC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTATGAGGACCTTACACTaGTCCAGCGGTGTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFMRTLH*SSGVSS
Trigger: CGAGGACACACCGCTGGATCAGTGTAAGGTCCTCAT...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGCATCCCTTTGGGTGTaGCAACAGCTGAGTCTCTAC +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEASLWV*QQLSLY
Trigger: GTAGAGACTCAGCTGTTGTCACACCCAAAGGGATGC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTAGAGGTCTGGCTGAGTaGAGGGCTTTATTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSRGLAE*RALFED
Trigger: GTCCTCAAATAAAGCCCTTCACTCAGCCAGACCTCT...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTAAGTGGGCCATCAGCTaGGGAGTAGCTCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSKWAIS*GVALKP
Trigger: TGGCTTTAGAGCTACTCCTCAGCTGATGGCCCACTT...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTGGGCAACCTCTTTaGAAGGTTCTATTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRSGQPL*KVLFPV
Trigger: AACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACACGTGGCATGCCTGTaGGGACAAACATCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEHVACL*GQTSGQ
Trigger: TTGGCCTGATGTTTGTCCTCACAGGCATGCCACGTG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTGTTATTCAGAGAGATaGGCCATCAAGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFCYSER*AIKGLP
Trigger: GGGCAGCCCCTTGATGGCTCATCTCTCTGAATAACA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCCTTTCATTTGGGCCTaGAATAGTTTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRPFIWA*NSFTTF
Trigger: GAAGGTGGTGAAACTATTTCAGGCCCAAATGAAAGG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTGAGCTCAGCTTTGGCTaGAGAAAGGGGCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSELSFG*RKGLLA
Trigger: TGCAAGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTC...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTTGTCCAGCTGCTGCATaGGCTCCCGTAGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSCPAAA*APVAAS
Trigger: AGAAGCAGCTACGGGAGCGCATGCAGCAGCTGGACA...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACCCTGCAGGCATGTCTaGAGCTCCTTCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEPCRHV*SSFTVF
Trigger: GAACACTGTGAAGGAGCTGCAGACATGCCTGCAGGG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATCCTGGCTGCCCTCTTaGACCTTGGTATCGTCTAAC +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLESWLPS*TLVSSN
Trigger: GTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATCGGCCTGCAGGGCTTaGAGCTTGCCCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSSACRA*SLPSRS
Trigger: GCTCCTGGAGGGCAAGCTGCAAGCCCTGCAGGCCGA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGATCTGGTCACCCAAGTaGCGGATGCTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWIWSPK*RMLACS
Trigger: CGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGAT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTATCAGCTGGGTCTGCTaGTGGCACTGGCTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAISWVC*WHWLSR
Trigger: TCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGAT...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTGCTCCTTCAGCTGCTaGACAAGGGTTTTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSCSFSC*TRVLCS
Trigger: GGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGTGCTTCCTCGGAGCTaGATTTGGCCTGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEVLPRS*IWPGTA
Trigger: AGCTGTCCCAGGCCAAATGCAGCTCCGAGGAAGCAC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTTCTGTGTTGGCCCGGTaGAGCTGCTCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLASVLAR*SCSCSS
Trigger: TGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGA...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTGTGCGCAAACCTGGATaGCCAGCTCAGCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLVRKPG*PAQLCL
Trigger: CAGACACAGCTGAGCTGGGCATCCAGGTTTGCGCAC...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTCAGCAGCCTGCAGCTaGCGGCCTTGCTCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTSAACS*RPCSSS
Trigger: GCTTGAGGAGCAAGGCCGGCAGCTGCAGGCTGCTGA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTAGGGCATCTGACTTCTaGCAGAGAGCATCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPRASDF*QRASLS
Trigger: GGACAAGGATGCTCTCTGGCAGAAGTCAGATGCCCT...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGGGATCAGGCTGTAGGTaGTGGACCTCACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWGSGCR*WTSQTA
Trigger: AGCTGTTTGTGAGGTCCAGCACCTACAGCCTGATCC...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGGATCAGGCTGTAGGTaGTGGACCTCACAAACAGCT +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEGSGCR*WTSQTA
Trigger: AGCTGTTTGTGAGGTCCAGCACCTACAGCCTGATCC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGCCTGTAGCCAACTGTaGTCCCAGGAGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSACSQL*SQERLM
Trigger: CATCAGCCTCTCCTGGGAGCACAGTTGGCTACAGGC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWHLMAF*QKRLLQ
Trigger: TTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCTGCAACCGGTCCTCTaGTGTGGAGTGACATGTTCA +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSLQPVL*CGVTCS
Trigger: TGAACATGTCACTCCACAGCAGAGGACCGGTTGCAG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAACTGCAACCGGTCCTCTaGTGTGGAGTGACATGTTCA +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQLQPVL*CGVTCS
Trigger: TGAACATGTCACTCCACAGCAGAGGACCGGTTGCAG...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTCTGCAACCGGTCCTCTaGTGTGGAGTGACATGTTCA +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSLQPVL*CGVTCS
Trigger: TGAACATGTCACTCCACAGCAGAGGACCGGTTGCAG...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAATCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSESRVFA*SWSSPP
Trigger: AGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGA...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGCGAATGGCTTCTCTCTaGTTTAATTCCCAACACCTC +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKRMASL*FNSQHL
Trigger: GAGGTGTTGGGAATTAAAGCAGAGAGAAGCCATTCG...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGGAGGCAGAGTGTCTCTaGATAACATACATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKEAECL*ITYIKQ
Trigger: CTGCTTGATGTATGTTATGCAGAGACACTCTGCCTC...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAAGAACCGAAACTTTCTaGGGCCAAGCGGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQRTETF*GQAEED
Trigger: GTCCTCTTCCGCTTGGCCCCAGAAAGTTTCGGTTCT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTGTATGTCTCCTGCCTaGGTCCAGAGGAAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFCMSPA*VQRKAQ
Trigger: CTGAGCCTTCCTCTGGACCCAGGCAGGAGACATACA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGATGATTCTCTGGAGCTaGCTCTCTGCATTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQMILWS*LSALVE
Trigger: CTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCAT...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAAGCGGATCCCATCATTaGCTCCTTTCACCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSGSHH*LLSPWP
Trigger: TGGCCAAGGTGAAAGGAGCCAATGATGGGATCCGCT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTACCAGCTGTTCCAGTTaGGCACTCTGCTGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPTSCSS*ALCCLL
Trigger: CAACAGACAGCAGAGTGCCCAACTGGAACAGCTGGT...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTCCCAGGAGCTCGTGTaGGCCAGCAACTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTSQELV*ASNSCS
Trigger: GCTGCAGGAGTTGCTGGCCCACACGAGCTCCTGGGA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTTTGCCCTCCAGGAGCTaGTTACGCCCGACCACATTC +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLALPSRS*LRPTTF
Trigger: GAATGTGGTCGGGCGTAACCAGCTCCTGGAGGGCAA...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCCAAGTGCCGGATGCTaGCCTGCTCGGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGPSAGC*PARPPG
Trigger: CCCTGGAGGCCGAGCAGGCCAGCATCCGGCACTTGG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCTTTCATGGCCTCCTTaGCCTTCCTTACAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSLSWPP*PSLQPA
Trigger: TGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGGGCTGCCCGCATCTTaGCCTGGAGGTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSGLPAS*PGGPPP
Trigger: AGGTGGTGGACCTCCAGGCCAAGATGCGGGCAGCCC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTGCAGCCCAGCTACTTaGCGCTCCAGGCCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPCSPAT*RSRPSR
Trigger: GCGAGAGGGCCTGGAGCGCCAAGTAGCTGGGCTGCA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTCAGCATGGCCGCCTaGCACTCTGCAAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSLSMAA*HSARWL
Trigger: CAACCATCTTGCAGAGTGCCAGGCGGCCATGCTGAG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCACAGCGTCGTCCGGTaGCCTGTAGTCTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFHSVVR*PVVCIC
Trigger: GCAAATACAGACTACAGGCCACCGGACGACGCTGTG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGGAGAATCAGTTTCAGTaGGTGTTTCAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKENQFQ*VFQAKR
Trigger: CCTCTTTGCCTGAAACACCCACTGAAACTGATTCTC...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGTTCAGCCGCATTTaGGTCGAGAGAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSLFSRI*VERISF
Trigger: GAAACTGATTCTCTCGACCCAAATGCGGCTGAACAG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCAGGCTGTAGGTGCTaGACCTCACAAACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSGCRC*TSQTAP
Trigger: GGGAGCTGTTTGTGAGGTCCAGCACCTACAGCCTGA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAACCTTGAGCTGGCCCTaGATGTTCTCCTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSETLSWP*MFSLWE
Trigger: CTCCCACAAGGAGAACATCCAGGGCCAGCTCAAGGT...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTCAGCCTCCAGCTTACTaGGGCAGTGAGGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAQPPAY*GSEGQE
Trigger: CTCTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTG...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCAGCCTCCAGCTTACTaGGGCAGTGAGGGACAAGAG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSQPPAY*GSEGQE
Trigger: CTCTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGCACAATCCTGCTCTGTaGTCACAACATCCACACTGG +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQHNPAL*SQHPHW
Trigger: CCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTG...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGTGTGGGCTGAGCAGTaGGAAGTGGGCAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSVWAEQ*EVGKWA
Trigger: AGCCCATTTGCCCACTTCCCACTGCTCAGCCCACAC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTCCCTCACCCCTaGCCAAACTGGGACCTTTTG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSLPHP*PNWDLL
Trigger: CAAAAGGTCCCAGTTTGGCCAGGGGTGAGGGAGAGA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGGTCTCTGTTGGACTTaGCCTGGAGTCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEGLCWT*PGVPDP
Trigger: TGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGTTTGGGGTCTCTGTTaGACTTGGCCTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEVWGLC*TWPGVP
Trigger: AGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTCATCTCAGGCCACGTaGCATGCCTGTGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSSQAT*HACEDK
Trigger: TTTGTCCTCACAGGCATGCCACGTGGCCTGAGATGA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTCATCTCAGGCCACGTaGCATGCCTGTGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPSSQAT*HACEDK
Trigger: TTTGTCCTCACAGGCATGCCACGTGGCCTGAGATGA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCAGGAAGGACCTCAGATaGAATGTCCCAGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQARKDLR*NVPGPK
Trigger: TTTGGGGCCTGGGACATTCCATCTGAGGTCCTTCCT...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGCTCTCCTGGAGGAGTaGTTCTGGGTAAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEALLEE*FWVSCN
Trigger: GTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGCAGATAAGAATGAATTaGGGTCCCAGACCCACCATC +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLQIRMN*GPRPTI
Trigger: GATGGTGGGTCTGGGACCCCAATTCATTCTTATCTG...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGTGGCCTTCTCTTTCTaGTCAAATTGCAGGAGATAC +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSVAFSF*SNCRRY
Trigger: GTATCTCCTGCAATTTGATCAGAAAGAGAAGGCCAC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTGGATGTTCGGAGCTCTaGGATAGACTTGACAAAGCG +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSGCSEL*DRLDKA
Trigger: CGCTTTGTCAAGTCTATCTCAGAGCTCCGAACATCC...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGGTCTTTGTCCTGAATaGGCTGCTTCTTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFGLCPE*AASSAP
Trigger: AGGAGCAGAAGAAGCAGCTCATTCAGGACAAAGACC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGAGGTGGTCTTTGTCCTaGATGAGCTGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWRWSLS*MSCFFC
Trigger: GCAGAAGAAGCAGCTCATTCAGGACAAAGACCACCT...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTACTTCTTGGTTCTGTTaGGGTCATCCAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSTSWFC*GHPGQQ
Trigger: TTGCTGACCTGGATGACCTCAACAGAACCAAGAAGT...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAACTTCTTGGTTCTGTTaGGGTCATCCAGGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQTSWFC*GHPGQQ
Trigger: TTGCTGACCTGGATGACCTCAACAGAACCAAGAAGT...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATCTGCCTCGGCCACAGTaGTGGGGATCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYLPRPQ*WGSGCR
Trigger: CCTACAGCCTGATCCCCATCACTGTGGCCGAGGCAG...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAAGGTATTGTCGAAGATaGGCATGTAGATGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQRYCRR*ACRCRV
Trigger: CACCCGGCATCTACATGCTCATCTTCGACAATACCT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGGGGCAGCCCAGGGGCTaGGTTGATGATTTTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWGQPRG*VDDFGA
Trigger: TGCTCCAAAATCATCAACTCAGCCCCTGGGCTGCCC...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGCCGGTGCAGAGTGCTaGGCACAAAGTCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSAGAEC*AQSPPQ
Trigger: CTGGGGAGGACTTTGTGCTCAGCACTCTGCACCGGC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATGGCACCGACTCGCATaGTGGCTGTGTACCTCCTTT +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEWHRLA*WLCTSF
Trigger: AAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTAGAGGTCTGGCTGAGTaGAGGGCTTTATTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPRGLAE*RALFED
Trigger: GTCCTCAAATAAAGCCCTTCACTCAGCCAGACCTCT...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGGCCTTGCTTAAAAACTaGCTGGAAGTGCTCAACTCT +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLALLKN*LEVLNS
Trigger: AGAGTTGAGCACTTCCAGTCAGTTTTTAAGCAAGGC...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGCCTTGCTTAAAAACTaGCTGGAAGTGCTCAACTCT +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDALLKN*LEVLNS
Trigger: AGAGTTGAGCACTTCCAGTCAGTTTTTAAGCAAGGC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTCTGGGCAACCTCTTTaGAAGGTTCTATTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVSGQPL*KVLFPV
Trigger: AACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGA...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCATCTGGTATCGATATaGAGACGTAACTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDHLVSI*RRNCYS
Trigger: TGAATAACAGTTACGTCTTCATATCGATACCAGATG...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTGGAATCCAGTGTGTTaGGGTCAAGCACTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSWNPVC*GQALCR
Trigger: TCTACAGAGTGCTTGACCTCAACACACTGGATTCCA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTCCCTCGGTGGCTGTCTaGTCAGCAGTGGTCAGACTC +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTPSVAV*SAVVRL
Trigger: GAGTCTGACCACTGCTGAGCAGACAGCCACCGAGGG...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACGTGATGGGTTCCCCTaGTTCCTGAAATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQRDGFP*FLKFFA
Trigger: AGCAAAGAATTTCAGGAAGCAGGGGAACCCATCACG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACCCTGCAGGCATGTCTaGAGCTCCTTCACAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEPCRHV*SSFTVF
Trigger: GAACACTGTGAAGGAGCTGCAGACATGCCTGCAGGG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGGGGAAGCTGGCTAAATaGTGGTTTTTCTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLGKLAK*WFFLSS
Trigger: ACTGGACAAGAAAAACCAGCATTTAGCCAGCTTCCC...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGCTGGGAATAGGTTCTTaGCGGCCCTTTGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVELGIGS*RPFVSD
Trigger: ATCAGACACAAAGGGCCGGCAAGAACCTATTCCCAG...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTGGGCCAGCAACTCCTaGAGCCGTCGCCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGWASNS*SRRQSW
Trigger: CCAGCTCTGGCGACGGCTGCAGGAGTTGCTGGCCCA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTGCTCTTCCTCCTGGCTaGCCTCTTGCACCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLALPPG*PLAPWY
Trigger: ATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGC...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGCTCTTCCTCCTGGCTaGCCTCTTGCACCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEALPPG*PLAPWY
Trigger: ATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATCGGGCTTCTGCCAGTTaGTGGCACTGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYRASAS*WHCSTS
Trigger: GGAGGTGGAGCAGTGCCAGCAACTGGCAGAAGCCCG...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACTGGTCATCCAGGGCTaGCCGCATCTTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSLVIQG*PHLGLE
Trigger: CTCCAGGCCAAGATGCGGGCAGCCCTGGATGACCAG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTTAAGGGCTTCATTCTaGTCCTTCAGCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQLRASF*SFSCCT
Trigger: TGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCGGTGCAGCTGCTCTTaGAGCTCAGCGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFRCSCS*SSACSS
Trigger: GCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCG...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTCAGCACTGAGCTTCTaGTGGAATTCCAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSALSF*WNSRAS
Trigger: AGATGCCCTGGAATTCCAGCAGAAGCTCAGTGCTGA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTTTTGCCACCGTGCTTaGTCAGGACGTAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSFCHRA*SGRSCC
Trigger: GCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTAGCAGCGCTCCTTTTTaGCACCGTGCTTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSSSAPF*HRACSG
Trigger: TCCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGAAAACTGACTGGAAGTaGTCAACTCTCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEKTDWK*STLLFK
Trigger: TTTAAACAGGAGAGTTGAGCACTTCCAGTCAGTTTT...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCAGTGCTCAAGGTGTTaGACGCAAAACATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGQCSRC*TQNIQL
Trigger: GAGCTGGATGTTTTGCGTGCAACACCTTGAGCACTG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCAGTGCTCAAGGTGTTaGACGCAAAACATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSQCSRC*TQNIQL
Trigger: GAGCTGGATGTTTTGCGTGCAACACCTTGAGCACTG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAATGAGGCTTGGGTATTaGTCTGCAGCCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEMRLGY*SAATRG
Trigger: GCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCAT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAATTTCGGCCCTCGGTaGCTGTCTGCTCAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWNFGPR*LSAQQW
Trigger: CCACTGCTGAGCAGACAGCCACCGAGGGCCGAAATT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATCTCGGATGATTCTCTaGAGCTGGCTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSRMIL*SWLSAL
Trigger: CAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTGTTGCCCAGGAGGGTaGCCTTCTCTTTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQACCPGG*PSLSDQ
Trigger: TTGATCAGAAAGAGAAGGCCACCCTCCTGGGCAACA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTTGTTGCCCAGGAGGGTaGCCTTCTCTTTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSCCPGG*PSLSDQ
Trigger: TTGATCAGAAAGAGAAGGCCACCCTCCTGGGCAACA...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACTTCTCACCTGCCACTaGCAGTTCTGGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSLLTCH*QFWARR
Trigger: CCGCCTGGCCCAGAACTGCCAGTGGCAGGTGAGAAG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATGCCCTCTTGCACCTTaGTATCGTCTAACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLECPLAP*YRLTVP
Trigger: AGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAAGCTCGCCTCCATCTaGTCACCCAAGTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWKLASI*SPKCRM
Trigger: CATCCGGCACTTGGGTGACCAGATGGAGGCGAGCTT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGCCTTGCTCTGTAGAATaGCCTCCTTCTCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEPCSVE*PPSLPS
Trigger: AGATGGCAGAGAAGGAGGCCATTCTACAGAGCAAGG...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTAGCAGCTCCTGGACATaGGCTCTGTTAAGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSSSWT*ALLRAS
Trigger: TGAAGCCCTTAACAGAGCCCATGTCCAGGAGCTGCT...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTGGTGTGCAGCCTCTTaGAGGCTCTGGGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGWCAAS*RLWARC
Trigger: GCAGCGGGCCCAGAGCCTCCAAGAGGCTGCACACCA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCCATGTCTGCTTGGGTaGCCTTCAGCTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSPCLLG*PSASPQ
Trigger: CTGTGGAGAAGCTGAAGGCCACCCAAGCAGACATGG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATCTCCCATGTCTGCTTaGGTGGCCTTCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPESPMSA*VAFSFS
Trigger: GGAGAAGCTGAAGGCCACCCAAGCAGACATGGGAGA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTGGCACTCTGCAAGATaGTTGCTAGTGCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFWHSAR*LLVQLS
Trigger: GCTGAGCTGCACTAGCAACCATCTTGCAGAGTGCCA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCTTGGATTTTTGTTGTaGCTTTTTCGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSLGFLL*LFRVPS
Trigger: AGAAGGAACTCGAAAAAGCCACAACAAAAATCCAAG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCACAGCGTCGTCCGGTaGCCTGTAGTCTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLHSVVR*PVVCIC
Trigger: GCAAATACAGACTACAGGCCACCGGACGACGCTGTG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCCGGACTCCTGTATCTaGCACAATTCCTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGPDSCI*HNSSSV
Trigger: CACAGATGAGGAATTGTGCCAGATACAGGAGTCCGG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACAGGCCCCAAGTACAGTaGGTTTTGCTCTTGGATTAT +
Preference number: 4 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDRPQVQ*VLLLDY
Trigger: ATAATCCAAGAGCAAAACCCACTGTACTTGGGGCCT...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGACACTGGCTGGCATTTaGGCATTAGATGTAGTGTAC +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLTLAGI*ALDVVY
Trigger: GTACACTACATCTAATGCCCAAATGCCAGCCAGTGT...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACACCCCTGGCCAAACTaGGACCTTTTGTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEHPWPN*DLLSDA
Trigger: AGCATCTGACAAAAGGTCCCAGTTTGGCCAGGGGTG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTCATTTGCAAGTGGCTaGATGGATTCAAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTASFASG*MDSKLA
Trigger: TGCTAACTTTGAATCCATCCAGCCACTTGCAAATGA...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAATCTCCGCAGTATCCTTaGAAAGCCAAGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQSPQYP*KAKHSK
Trigger: CTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGA...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTAGAAGGTCATCAGCTTaGCCAGAGTCTCCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPRRSSA*PESPQY
Trigger: ATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCT...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCTACTCAGTGAATGGTaGTTCTTGTTGCATATGGTG +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRLLSEW*FLLHMV
Trigger: CACCATATGCAACAAGAACCACCATTCACTGAGTAG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGCTCTCCTGGAGGAGTaGTTCTGGGTAAGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSALLEE*FWVSCN
Trigger: GTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGGTGAGTGGCTTCAGTaGCATGATGAAGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPGEWLQ*HDEEGI
Trigger: GATGCCTTCTTCATCATGCCACTGAAGCCACTCACC...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGGTGAGTGGCTTCAGTaGCATGATGAAGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFGEWLQ*HDEEGI
Trigger: GATGCCTTCTTCATCATGCCACTGAAGCCACTCACC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTCTGTAGAGTCCACTTaGACCTGGAGGACAACACTT +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSSVEST*TWRTTL
Trigger: AAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp TTCCAAATGTTGAGCCTTCCAAATGAGGCTTGGGTATaGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FQMLSLPNEAWV*LCSHQRQSVSA
Trigger: TGCAGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACATTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGCTCCCCTTGCTGGCTaGCAGCTGCCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLAPLAG*QLPSAP
Trigger: AGGAGCTGAGGGCAGCTGTCAGCCAGCAAGGGGAGC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGCCCTCTCGCTCCCTTaGGGCTGCCTCTTTGGCGTC +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLALSLP*GCLFGV
Trigger: GACGCCAAAGAGGCAGCCTCAAGGGAGCGAGAGGGC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGATGAGGACCTTACACTaGTCCAGCGGTGTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWMRTLH*SSGVSS
Trigger: CGAGGACACACCGCTGGATCAGTGTAAGGTCCTCAT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAATCGGGTCGTGGGAATaGGGACCTTACACTGATCCA +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEIGSWE*GPYTDP
Trigger: TGGATCAGTGTAAGGTCCTCATTCCCACGACCCGAT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGAAGTTACTGAGGTGCTaGAGCTACAGGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLKLLRC*SYRKSL
Trigger: AAGTGATTTCCTGTAGCTTCAGCACCTCAGTAACTT...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAATGGAAACATTGCCTaGGCCCTTCAACGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWNGNIA*ALQRLG
Trigger: CCCGAGGCGTTGAAGGGCTCAGGCAATGTTTCCATT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCGTGAAGGGCTTTATTTaGGGACAGAATCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAVKGFI*GQNHPD
Trigger: GTCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCAC...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGCCTCTTTGTTGGTGGTaGGGTTGTGGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWPLCWW*GCGCWC
Trigger: ACACCAGCAGCCACAACCTCACCACCAACAAAGAGG...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCTGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFCIWCQ*HFRRSS
Trigger: TGATGACCTTCTGAAGTGTCACTGGCACCATATGCA...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLECIWCQ*HFRRSS
Trigger: TGATGACCTTCTGAAGTGTCACTGGCACCATATGCA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTCCATTAGCTACTCAGTaGATGGTGGTTCTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSPLATQ*MVVLVA
Trigger: TGCAACAAGAACCACCATTCACTGAGTAGCTAATGG...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGTGGAATCCAGTGTGTTaGGGTCAAGCACTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWWNPVC*GQALCR
Trigger: TCTACAGAGTGCTTGACCTCAACACACTGGATTCCA...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAAAAACACAGGCTCTGTaGTTTCATCCCCAACTGGCG +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEKTQAL*FHPQLA
Trigger: CGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTT...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAATTCCCAACACCTCTaGGCCAAGGACAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLENSQHL*AKDSFL
Trigger: CAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAATT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTGCAATTCCAAATGTTaGGCCTTCCAAATGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVCNSKC*AFQMRL
Trigger: AAGCCTCATTTGGAAGGCTCAACATTTGGAATTGCA...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCAGAAAGGGGCTTCTTaGATAGTACCAGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSQKGAS*IVPVTG
Trigger: ACCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATCTCTGTCCAGCTGCTaGATGCGCTCCCGTAGCTGC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSSLSSC*MRSRSC
Trigger: GCAGCTACGGGAGCGCATGCAGCAGCTGGACAGAGA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTGCAGTTGCTCCCCTTaGTGGCTGACAGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPCSCSP*WLTAAL
Trigger: GAGGGCAGCTGTCAGCCAGCAAGGGGAGCAACTGCA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTCCTGTGCCAAGGGCTaGAGCATGGACTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGSCAKG*SMDSSR
Trigger: GCGGCTGGAGTCCATGCTGCAGCCCTTGGCACAGGA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTCTAACTGTGCCTCCTaGAGGCCCCTCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPSNCAS*RPLCSS
Trigger: GGAGGAGCAGAGGGGCCTGCAGGAGGCACAGTTAGA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCTGGTCATCCAGGGCTaGCCGCATCTTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGLVIQG*PHLGLE
Trigger: CTCCAGGCCAAGATGCGGGCAGCCCTGGATGACCAG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTATGCTTAGCTGGCTCTaGACCTTGTCCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSMLSWL*TLSWSS
Trigger: GGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCAT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAATTTTGCCACCGTGCTTaGTCAGGACGTAGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEFCHRA*SGRSCC
Trigger: GCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAA...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTTGTACACACAGCCATTaGAGGCCCCAAGTACAGTGG +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLACTHSH*RPQVQW
Trigger: CCACTGTACTTGGGGCCTGCAATGGCTGTGTGTACA...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCCCAGGGATCCATCATaGCTCTGTTTACTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGPRDPS*LCLLCY
Trigger: GTAACAGAGTAAACAGAGGCATGATGGATCCCTGGG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCCCCAGGGATCCATCATaGCTCTGTTTACTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFPRDPS*LCLLCY
Trigger: GTAACAGAGTAAACAGAGGCATGATGGATCCCTGGG...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGGTAGCTGGAGGAACTaGCGGGCCCAGCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFGSWRN*RAQLSD
Trigger: ATCTGAGAGCTGGGCCCGGCAGTTCCTCCAGCTACC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEHLMAF*QKRLLQ
Trigger: TTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGCTTCTGATTATCATTTaGAAGTGGCTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: PVSLPALGPVHLESSVLRLLIII*KWLDGF
Trigger: GAATCCATCCAGCCACTTGCAAATGATAATCAGAAG...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGCCAGGGCTACCACCTaGAGCAGTGGTTCTTCAATT +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEARATT*SSGSSI
Trigger: AATTGAAGAACCACTGCTGCAGGTGGTAGCCCTGGC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCGAGGACAACACTTTGTaGCAAACGTGCCTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSEDNTL*QTCLLV
Trigger: AACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTC...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGTCCCGTGTCTTTGCCTaGTCTTGGTCCAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWSRVFA*SWSSPP
Trigger: AGGTGGACTGGACCAAGAGCAGGCAAAGACACGGGA...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGGAGGCAGAGTGTCTCTaGATAACATACATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQEAECL*ITYIKQ
Trigger: CTGCTTGATGTATGTTATGCAGAGACACTCTGCCTC...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGATGAGGCTTGGGTATTaGTCTGCAGCCACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWMRLGY*SAATRG
Trigger: GCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCAT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTATTGAGCAGGTGGGGTaGTGGTATTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGIEQVG*WYLMCF
Trigger: GAAGCACATCAAATACCAGCACCCCACCTGCTCAAT...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTATTGAGCAGGTGGGGTaGTGGTATTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSIEQVG*WYLMCF
Trigger: GAAGCACATCAAATACCAGCACCCCACCTGCTCAAT...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAAGAACCGAAACTTTCTaGGGCCAAGCGGAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPERTETF*GQAEED
Trigger: GTCCTCTTCCGCTTGGCCCCAGAAAGTTTCGGTTCT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTCCCGCACCTCCAACTaGTCCAGCTCTAGTCGCATC +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTSRTSN*SSSSRI
Trigger: GATGCGACTAGAGCTGGACCAGTTGGAGGTGCGGGA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCCAAGGGCTGCAGCATaGACTCCAGCCGCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHPRAAA*TPAAAG
Trigger: CCCTGCGGCGGCTGGAGTCCATGCTGCAGCCCTTGG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCCTTGGATTTTTGTTGTaGCTTTTTCGAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTALGFLL*LFRVPS
Trigger: AGAAGGAACTCGAAAAAGCCACAACAAAAATCCAAG...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCTGTTCAGCCGCATTTaGGTCGAGAGAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPLFSRI*VERISF
Trigger: GAAACTGATTCTCTCGACCCAAATGCGGCTGAACAG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTTGGATGTTCTCCTTGTaGGAGTTGCATCGGGTCGTG +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAWMFSL*ELHRVV
Trigger: CACGACCCGATGCAACTCCCACAAGGAGAACATCCA...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGACCTTGAGCTGGCCCTaGATGTTCTCCTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWTLSWP*MFSLWE
Trigger: CTCCCACAAGGAGAACATCCAGGGCCAGCTCAAGGT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGGGTGTTTAAACCTTTaGCAGAGCATCCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEGCLNL*QSIPLG
Trigger: ACCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGAGGCTGATGGTCTCCTaGGTGTTTAAACCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWRLMVS*VFKPLA
Trigger: TGCCAAAGGTTTAAACACCCAGGAGACCATCAGCCT...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSKHVCR*GRSSYL
Trigger: TAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTT...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLKHVCR*GRSSYL
Trigger: TAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTT...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGCTGACTGCAGGCAGCTaGTTCCATGAACAAGGGACG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWLTAGS*FHEQGT
Trigger: CGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAG...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAACCCATGGAAGAACCTaGGGCCTGACTGCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSTHGRT*GLTAGS
Trigger: GCTGCCTGCAGTCAGGCCCCAGGTTCTTCCATGGGT...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTCACCCCTGGCCAAACTaGGACCTTTTGTCAGATGCT +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAHPWPN*DLLSDA
Trigger: AGCATCTGACAAAAGGTCCCAGTTTGGCCAGGGGTG...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTTCATCTCAGGCCACGTaGCATGCCTGTGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: FLWATSLKGSIPCSPCLASSQAT*HACEDK
Trigger: TTTGTCCTCACAGGCATGCCACGTGGCCTGAGATGA...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTTCTCCGCAGTATCCTTaGAAAGCCAAGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSSPQYP*KAKHSK
Trigger: CTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGA...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTCTCCGCAGTATCCTTaGAAAGCCAAGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPSPQYP*KAKHSK
Trigger: CTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAAGAAGGTCATCAGCTTaGCCAGAGTCTCCGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSERRSSA*PESPQY
Trigger: ATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCT...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGATTTCATCCCCAACTaGCGATTTCCTTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVDFIPN*RFPFIW
Trigger: CCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTTTTGTAAACAAGAATaGCCGTCTCGATGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPFCKQE*PSRWSL
Trigger: CAAAGACCATCGAGACGGCCATTCTTGTTTACAAAA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCAGATAAGAATGAATTaGGGTCCCAGACCCACCATC +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGQIRMN*GPRPTI
Trigger: GATGGTGGGTCTGGGACCCCAATTCATTCTTATCTG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp GGCATTTGGGCATTAGATGTAGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTGGGTTTTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GIWALDVVYTQP*QAPSTVGFALG
Trigger: TCCAAGAGCAAAACCCACTGTACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp AATGCAAGAGGCCCAGCTTTTCTCTGGGCAACCTCTTaGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NARGPAFLWATS*KGSIPCSPCLA
Trigger: AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAAAGCTGGGCCTCTTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTGGATGTTCGGAGCTCTaGGATAGACTTGACAAAGCG +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLGCSEL*DRLDKA
Trigger: CGCTTTGTCAAGTCTATCTCAGAGCTCCGAACATCC...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCACTTTGGTGTTCATaGAGCACTGCTGTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVESLWCS*STAVRC
Trigger: ACACCTTACAGCAGTGCTTCATGAACACCAAAGTGA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATCACTTTGGTGTTCATaGAGCACTGCTGTAAGGTGT +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLESLWCS*STAVRC
Trigger: ACACCTTACAGCAGTGCTTCATGAACACCAAAGTGA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTAGGTATTGTCGAAGATaGGCATGTAGATGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSRYCRR*ACRCRV
Trigger: CACCCGGCATCTACATGCTCATCTTCGACAATACCT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTAAGTTACTGAGGTGCTaGAGCTACAGGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSKLLRC*SYRKSL
Trigger: AAGTGATTTCCTGTAGCTTCAGCACCTCAGTAACTT...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGCTTTATGTGACAGGTaGGGAAGAGCAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEALCDR*GRAVFP
Trigger: AGGAAACACTGCTCTTCCTCACCTGTCACATAAAGC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAACTTTGGGAAATGTGTaGCTGGACTTAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLETLGNV*LDLGHK
Trigger: CTTGTGACCTAAGTCCAGTCACACATTTCCCAAAGT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCATTAGCTACTCAGTaGATGGTGGTTCTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAPLATQ*MVVLVA
Trigger: TGCAACAAGAACCACCATTCACTGAGTAGCTAATGG...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCCTTTCATTTGGGCCTaGAATAGTTTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPPFIWA*NSFTTF
Trigger: GAAGGTGGTGAAACTATTTCAGGCCCAAATGAAAGG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGTGGTCTTTGTGTACATaGCCATCCTTGGTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWWSLCT*PSLVLS
Trigger: GCTTAGAACCAAGGATGGTCATGTACACAAAGACCA...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTGCAATTCCAAATGTTaGGCCTTCCAAATGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSCNSKC*AFQMRL
Trigger: AAGCCTCATTTGGAAGGCTCAACATTTGGAATTGCA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTGAGTCTGCAGGTAGCTaGTCACCAAGCTGCTCATGC +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTESAGS*SPSCSC
Trigger: GCATGAGCAGCTTGGTGAGCAGCTACCTGCAGACTC...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTCTTGCAGCTCAGCGTaGTCCAGCTGTGCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPSCSSA*SSCASS
Trigger: CGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATCTGTGTTGGCCCGGTaGAGCTGCTCTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSSVLAR*SCSCSS
Trigger: TGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGGCCGCCTGGCACTCTaGAAGATGGTTGCTAGTGCA +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYGRLAL*KMVASA
Trigger: TGCACTAGCAACCATCTTGCAGAGTGCCAGGCGGCC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTTCAGCACTGAGCTTCTaGTGGAATTCCAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLSALSF*WNSRAS
Trigger: AGATGCCCTGGAATTCCAGCAGAAGCTCAGTGCTGA...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGTCGAGGCAGTGGTTTaGCTCTGTGTCTCCGAGCCA +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYVEAVV*LCVSEP
Trigger: TGGCTCGGAGACACAGAGGCAAACCACTGCCTCGAC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTAGTAGTAACAGAAGATaGGGCCACATATCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSSSNRR*GHISCS
Trigger: ACTGCAGGATATGTGGCCGCATCTTCTGTTACTACT...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTGCCAATGCACAATCCTaGTCTGTGGTCACAACATCC +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLANAQS*SVVTTS
Trigger: GGATGTTGTGACCACAGAGCAGGATTGTGCATTGGC...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGCCAATGCACAATCCTaGTCTGTGGTCACAACATCC +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSANAQS*SVVTTS
Trigger: GGATGTTGTGACCACAGAGCAGGATTGTGCATTGGC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTATGATTCTCTGGAGCTaGCTCTCTGCATTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSMILWS*LSALVE
Trigger: CTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCAT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATCCTTCACAGTGTTCTaGGTGGCCTGGGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSSFTVF*VAWVTS
Trigger: GGAGGTCACCCAGGCCACCCAGAACACTGTGAAGGA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTAAGCTGGCTAAATGCTaGTTTTTCTTGTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSKLAKC*FFLSSE
Trigger: CTCACTGGACAAGAAAAACCAGCATTTAGCCAGCTT...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTGCCAGCCTGGGAAGCTaGCTAAATGCTGGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLASLGS*LNAGFS
Trigger: AGAAAAACCAGCATTTAGCCAGCTTCCCAGGCTGGC...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTATTTCAGCACTCAGCTaGAACTTGAGGGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFISALS*NLRVLS
Trigger: GCTCAACACCCTCAAGTTCCAGCTGAGTGCTGAAAT...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTAACATCCACACTGGCTaGCATTTGGGCATTAGATGT +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPNIHTG*HLGIRC
Trigger: ACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTT...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAACATCCACACTGGCTaGCATTTGGGCATTAGATGT +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLENIHTG*HLGIRC
Trigger: ACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCACAATCCTGCTCTGTaGTCACAACATCCACACTGG +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSHNPAL*SQHPHW
Trigger: CCAGTGTGGATGTTGTGACCACAGAGCAGGATTGTG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATCTGAGCAGTGGGAAGTaGGCAAATGGGCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYLSSGK*ANGLLG
Trigger: CCCCAACAGCCCATTTGCCCACTTCCCACTGCTCAG...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGTGTGGGCTGAGCAGTaGGAAGTGGGCAAATGGGCT +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFVWAEQ*EVGKWA
Trigger: AGCCCATTTGCCCACTTCCCACTGCTCAGCCCACAC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATTGGTGGTGAGGTTGTaGCTGCTGGTGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSLVVRL*LLVCGG
Trigger: CCCACCACACACCAGCAGCCACAACCTCACCACCAA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGATGACCTCTTACTTGTaGCCCCACAAAAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWMTSYL*PHKSPL
Trigger: AAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCAT...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCATGACCTCTTACTTGTaGCCCCACAAAAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TLAGIWALDVVYTQPLQAMTSYL*PHKSPL
Trigger: AAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCAT...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCTGGAGGAGTGGTTCTaGGTAAGCTGCAACCGGTCC +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFLEEWF*VSCNRS
Trigger: GGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAG...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTTACCACCTGCAGCAGTaGTTCTTCAATTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSYHLQQ*FFNCYL
Trigger: CAAATAGCAATTGAAGAACCACTGCTGCAGGTGGTA...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGTAGAGTCCACTTaGACCTGGAGGACAACACTT +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFSVEST*TWRTTL
Trigger: AAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCTTCCAAATGAGGCTTaGGTATTGCTCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSLPNEA*VLLCSH
Trigger: GTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp GGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTaGTGGGTAAGTGAATCTGACAGAGGTTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: GGQHFVPNVPPC*WVSESDRGWHV
Trigger: AACATGCCAACCTCTGTCAGATTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGTGGCCTTCTCTTTCTaGTCAAATTGCAGGAGATAC +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEVAFSF*SNCRRY
Trigger: GTATCTCCTGCAATTTGATCAGAAAGAGAAGGCCAC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAAAGTTACTGAGGTGCTaGAGCTACAGGAAATCACTT +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQKLLRC*SYRKSL
Trigger: AAGTGATTTCCTGTAGCTTCAGCACCTCAGTAACTT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFRQLVP*TRDEEL
Trigger: CAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTACTTTGGGAAATGTGTaGCTGGACTTAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFTLGNV*LDLGHK
Trigger: CTTGTGACCTAAGTCCAGTCACACATTTCCCAAAGT...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAACTTTGGGAAATGTGTaGCTGGACTTAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSETLGNV*LDLGHK
Trigger: CTTGTGACCTAAGTCCAGTCACACATTTCCCAAAGT...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTGCAATTCCAAATGTTaGGCCTTCCAAATGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSCNSKC*AFQMRL
Trigger: AAGCCTCATTTGGAAGGCTCAACATTTGGAATTGCA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCAGAAAGGGGCTTCTTaGATAGTACCAGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLQKGAS*IVPVTG
Trigger: ACCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAAGCTGCTCACCAAGCTaGTCATGCTGGAGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLSCSPS*SCWSCG
Trigger: GCCGCAGCTCCAGCATGAGCAGCTTGGTGAGCAGCT...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTCCAGTTGGGCACTCTaGTGTCTGTTGACCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPSSWAL*CLLTSS
Trigger: CGAGGAGGTCAACAGACAGCAGAGTGCCCAACTGGA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACTCATTCTTCTCACCTaGCACTGGCAGTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSLILLT*HWQFWA
Trigger: GGCCCAGAACTGCCAGTGGCAGGTGAGAAGAATGAG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAATCTGGTCACCCAAGTaGCGGATGCTGGCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLIWSPK*RMLACS
Trigger: CGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGAT...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTTTAAGGGCTTCATTCTaGTCCTTCAGCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLLRASF*SFSCCT
Trigger: TGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAA...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCGTGCGCAAACCTGGATaGCCAGCTCAGCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGVRKPG*PAQLCL
Trigger: CAGACACAGCTGAGCTGGGCATCCAGGTTTGCGCAC...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTAAGCTCTCCTTCTCTTaGTGCAGCCCAGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTKLSFS*CSPATW
Trigger: CCAAGTAGCTGGGCTGCAGCAAGAGAAGGAGAGCTT...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTCAGGACGTAGTTGTTaGAGCAGTAGTAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPSGRSC*SSSNRR
Trigger: TCTTCTGTTACTACTGCTGCAACAACTACGTCCTGA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAAGCAGCGCTCCTTTTTaGCACCGTGCTTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSSSAPF*HRACSG
Trigger: TCCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCT...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTCACAAACAGCTCCCTaGTACCCTCCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGSQTAP*YPPRSW
Trigger: CCAGCTTCGGGGAGGGTAGCAGGGAGCTGTTTGTGA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACGCTGATGGTGAGGCCTaGCTCGGCCACAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHADGEA*LGHSDG
Trigger: CCCATCACTGTGGCCGAGGCAGGCCTCACCATCAGC...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCGCTAAGAGTGGCCGGTaGAGAGTGCTGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPAKSGR*RVLSTK
Trigger: CTTTGTGCTCAGCACTCTGCACCGGCCACTCTTAGC...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGCTAAGAGTGGCCGGTaGAGAGTGCTGAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSAKSGR*RVLSTK
Trigger: CTTTGTGCTCAGCACTCTGCACCGGCCACTCTTAGC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACTGTTCCCCATGCCTTaGTTAAAAACTGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSELFPMP*LKTDWK
Trigger: CTTCCAGTCAGTTTTTAAGCAAGGCATGGGGAACAG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCTGTTCCCCATGCCTTaGTTAAAAACTGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFLFPMP*LKTDWK
Trigger: CTTCCAGTCAGTTTTTAAGCAAGGCATGGGGAACAG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTCTGCCAGAAGAGGCTaGTCCAAGGAAGCCGAATGC +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFSARRG*SKEAEC
Trigger: GCATTCGGCTTCCTTGGAGCAGCCTCTTCTGGCAGA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATTCTGCCAGAAGAGGCTaGTCCAAGGAAGCCGAATGC +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYSARRG*SKEAEC
Trigger: GCATTCGGCTTCCTTGGAGCAGCCTCTTCTGGCAGA...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGCTTGGGTATTGCTCTaGAGCCACCAGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSAWVLL*SHQRQS
Trigger: ACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTATTGAGCAGGTGGGGTaGTGGTATTTGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLIEQVG*WYLMCF
Trigger: GAAGCACATCAAATACCAGCACCCCACCTGCTCAAT...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGTCCGAGCTCAGCTTTaGCTGCAGAAAGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFVRAQL*LQKGAS
Trigger: AGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGAC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATGTTCAGGTCAAAGTTaGACACCATCTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLECSGQS*TPSLES
Trigger: AGACTCAAGAGATGGTGTCCAACTTTGACCTGAACA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCAGGTCACTCACATGTTaGCTCACCTGTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPRSLTC*LTCASW
Trigger: CCAGCTGGCACAGGTGAGCCAACATGTGAGTGACCT...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTTTTCGAGTTCCTTCTaGGTCCTTTCTAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPFSSSF*VLSRSS
Trigger: TGAAGACCTAGAAAGGACCCAGAAGGAACTCGAAAA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACACAGCGTCGTCCGGTaGCCTGTAGTCTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSHSVVR*PVVCIC
Trigger: GCAAATACAGACTACAGGCCACCGGACGACGCTGTG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGAGAATCAGTTTCAGTaGGTGTTTCAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFENQFQ*VFQAKR
Trigger: CCTCTTTGCCTGAAACACCCACTGAAACTGATTCTC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGTGCGAACCTTGAGCTaGCCCTGGATGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSVRTLS*PWMFSL
Trigger: CAAGGAGAACATCCAGGGCCAGCTCAAGGTTCGCAC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTGGGTGTTTAAACCTTTaGCAGAGCATCCCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLGCLNL*QSIPLG
Trigger: ACCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCC...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGGGCAAATGGGCTGTTaGGGAACCTGTCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLGQMGC*GTCQEG
Trigger: CCCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCCTGACTGCAGGCAGCTaGTTCCATGAACAAGGGACG +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPLTAGS*FHEQGT
Trigger: CGTCCCTTGTTCATGGAACCAGCTGCCTGCAGTCAG...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGTTTGGGGTCTCTGTTaGACTTGGCCTGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYVWGLC*TWPGVP
Trigger: AGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTATTATCATTTGCAAGTaGCTGGATGGATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPIIICK*LDGFKV
Trigger: AACTTTGAATCCATCCAGCCACTTGCAAATGATAAT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTACCGGTCCTCTGCTGTaGAGTGACATGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTTGPLL*SDMFRK
Trigger: CTTCCTGAACATGTCACTCCACAGCAGAGGACCGGT...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTTTTTGTAAACAAGAATaGCCGTCTCGATGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSFCKQE*PSRWSL
Trigger: CAAAGACCATCGAGACGGCCATTCTTGTTTACAAAA...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCGTTTTTCTTGTCCAGTaGGTCCCGTGTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPVFLVQ*VPCGLK
Trigger: CTTGAGGCCACACGGGACTCACTGGACAAGAAAAAC...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCAGGCAGCTGGTTCCATaGACAAGGGACGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGRQLVP*TRDEEL
Trigger: CAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTCCTCTGCTGTGGAGTaGCATGTTCAGGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPSSAVE*HVQEGP
Trigger: AGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATTCCTCTGCTGTGGAGTaGCATGTTCAGGAAGGACCT +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYSSAVE*HVQEGP
Trigger: AGGTCCTTCCTGAACATGTCACTCCACAGCAGAGGA...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCCTTTCATTTGGGCCTaGAATAGTTTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLPFIWA*NSFTTF
Trigger: GAAGGTGGTGAAACTATTTCAGGCCCAAATGAAAGG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTTGGTCTTTGTGTACATaGCCATCCTTGGTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLWSLCT*PSLVLS
Trigger: GCTTAGAACCAAGGATGGTCATGTACACAAAGACCA...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCGAGCTCAGCTTTGGCTaGAGAAAGGGGCTTCTTGCA +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPELSFG*RKGLLA
Trigger: TGCAAGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTC...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTATGCTTAGCTGGCTCTaGACCTTGTCCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFMLSWL*TLSWSS
Trigger: GGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCAT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCAGATTTCCGAATCCTaGCCCACGGGCATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFQISES*PTGMSS
Trigger: TGAAGACATGCCCGTGGGGCAGGATTCGGAAATCTG...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGCCTGTAGCCAACTGTaGTCCCAGGAGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLACSQL*SQERLM
Trigger: CATCAGCCTCTCCTGGGAGCACAGTTGGCTACAGGC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATGTACACACAGCCATTaGAGGCCCCAAGTACAGTGG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSCTHSH*RPQVQW
Trigger: CCACTGTACTTGGGGCCTGCAATGGCTGTGTGTACA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTAAAACTGACTGGAAGTaGTCAACTCTCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSKTDWK*STLLFK
Trigger: TTTAAACAGGAGAGTTGAGCACTTCCAGTCAGTTTT...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACTGTTCCCCATGCCTTaGTTAAAAACTGACTGGAAG +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPELFPMP*LKTDWK
Trigger: CTTCCAGTCAGTTTTTAAGCAAGGCATGGGGAACAG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACTTCTGATTATCATTTaGAAGTGGCTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLELLIII*KWLDGF
Trigger: GAATCCATCCAGCCACTTGCAAATGATAATCAGAAG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGTCAAAGATTCTAGATTaGTCTGGGTTCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLSKILD*SGFSFV
Trigger: AACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGA...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTAACAATAGCAGTCAGTaGTCAAGGTGTTGCACGCAA +
Preference number: 4 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLNNSSQ*SRCCTQ
Trigger: TTGCGTGCAACACCTTGAGCACTGACTGCTATTGTT...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTAACAATAGCAGTCAGTaGTCAAGGTGTTGCACGCAA +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSNNSSQ*SRCCTQ
Trigger: TTGCGTGCAACACCTTGAGCACTGACTGCTATTGTT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCGCTTGGGTATTGCTCTaGAGCCACCAGAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGAWVLL*SHQRQS
Trigger: ACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGC...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTCTCGGATGATTCTCTaGAGCTGGCTCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTSRMIL*SWLSAL
Trigger: CAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTAGCGGATCCCATCATTaGCTCCTTTCACCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFSGSHH*LLSPWP
Trigger: TGGCCAAGGTGAAAGGAGCCAATGATGGGATCCGCT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCACCTCCCACTGCTTCTaGAGCTCAGCTACCAAGCAA +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPTSHCF*SSATKQ
Trigger: TTGCTTGGTAGCTGAGCTCCAGAAGCAGTGGGAGGT...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACCATCTGGGCTTTCATaGCCTCCTTGGCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSPSGLS*PPWPSL
Trigger: TAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAGGCTGATGGTCTCCTaGGTGTTTAAACCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWRLMVS*VFKPLA
Trigger: TGCCAAAGGTTTAAACACCCAGGAGACCATCAGCCT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAACACTGGCTGGCATTTaGGCATTAGATGTAGTGTAC +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPETLAGI*ALDVVY
Trigger: GTACACTACATCTAATGCCCAAATGCCAGCCAGTGT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTGCTCTGTTCACCCATaGAAGAACCTGGGGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGCSVHP*KNLGPD
Trigger: GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTATTGGTGGTGAGGTTGTaGCTGCTGGTGTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLLVVRL*LLVCGG
Trigger: CCCACCACACACCAGCAGCCACAACCTCACCACCAA...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCATTTGCAAGTGGCTaGATGGATTCAAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVESFASG*MDSKLA
Trigger: TGCTAACTTTGAATCCATCCAGCCACTTGCAAATGA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAAGGAAGGACCTCAGATaGAATGTCCCAGGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSRKDLR*NVPGPK
Trigger: TTTGGGGCCTGGGACATTCCATCTGAGGTCCTTCCT...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATACCGGTCCTCTGCTGTaGAGTGACATGTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYTGPLL*SDMFRK
Trigger: CTTCCTGAACATGTCACTCCACAGCAGAGGACCGGT...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAGATGAAGAAGGCATCTaGTATCGATATGAAGACGTA +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEDEEGI*YRYEDV
Trigger: TACGTCTTCATATCGATACCAGATGCCTTCTTCATC...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGAGTCCACTTGGACCTaGAGGACAACACTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYESTWT*RTTLCA
Trigger: GGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCTCTCTCCTGTTTCCTTaGAAGAAACATAATGAAATG +
Preference number: 4 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVSLLFP*KKHNEM
Trigger: CATTTCATTATGTTTCTTCCAAGGAAACAGGAGAGA...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTCTTCCAAATGAGGCTTaGGTATTGCTCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTLPNEA*VLLCSH
Trigger: GTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp TCTCCTGGGTGTTTAAACCTTTGGCAGAGCATCCCTTaGGGTGTGACAACAGCTGAGTCTCTACTTAATGGA +
Preference number: 4 (lower is better)
Translates to: SPGCLNLWQSIP*GVTTAESLLNG
Trigger: TCCATTAAGTAGAGACTCAGCTGTTGTCACACCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp GTGCTTCTAGATAATTCTTTGGCAGATAAGAATGAATaGGGGTCCCAGACCCACCATCCCGTAAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: VLLDNSLADKNE*GSQTHHPVRPH
Trigger: ATGTGGCCTTACGGGATGGTGGGTCTGGGACCCCAATTCATTCTTATCTGCCAAAGAATTATCTAGAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCATGCTCTGGTAGTCCATaGTTTCAGCACTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSCSGSP*FQHSAG
Trigger: TCCAGCTGAGTGCTGAAATCATGGACTACCAGAGCA...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATTTAGAGACAAACCTTaGGAAGGTATTGTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: VTLQKVISLARVSAVSLEFRDKP*EGIVED
Trigger: ATCTTCGACAATACCTTCTCAAGGTTTGTCTCTAAA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCATCTGGTATCGATATaGAGACGTAACTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPHLVSI*RRNCYS
Trigger: TGAATAACAGTTACGTCTTCATATCGATACCAGATG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTAATTCCCAACACCTCTaGGCCAAGGACAGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTNSQHL*AKDSFL
Trigger: CAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAATT...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACTGGGAATAGGTTCTTaGCGGCCCTTTGTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSLGIGS*RPFVSD
Trigger: ATCAGACACAAAGGGCCGGCAAGAACCTATTCCCAG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATCAGGACGTAGTTGTTaGAGCAGTAGTAACAGAAGA +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPESGRSC*SSSNRR
Trigger: TCTTCTGTTACTACTGCTGCAACAACTACGTCCTGA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATTCCAAGGAAGCCGAATaGAAGAGGCCCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYSKEAE*KRPSFS
Trigger: AGAAAAGCTGGGCCTCTTGCATTCGGCTTCCTTGGA...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCACCTGATGGCTTTCTaGCAGAAGAGGCTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGHLMAF*QKRLLQ
Trigger: TTGGAGCAGCCTCTTCTGGCAGAAAGCCATCAGGTG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAAAGTTCCCCTACAAAGTaGTTTCTTGGTAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSSPTK*FLGKCF
Trigger: AAAACACTTACCAAGAAAGCACTTTGTAGGGGAACT...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCAGTTCCCCTACAAAGTaGTTTCTTGGTAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFSSPTK*FLGKCF
Trigger: AAAACACTTACCAAGAAAGCACTTTGTAGGGGAACT...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAAAGCAGAAGAGCCAGTaGTCAGCGTCCTCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLKQKSQ*SASSWQ
Trigger: TTGCCAGGAGGACGCTGACCACTGGCTCTTCTGCTT...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAAGCATACCCACCTGCTaGCTGAGGTGGTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLSIPTC*LRWSLS
Trigger: GGACAAAGACCACCTCAGCCAGCAGGTGGGTATGCT...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACGTCAGTGCGCAAACCTaGATGCCCAGCTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHVSAQT*MPSSAV
Trigger: CACAGCTGAGCTGGGCATCCAGGTTTGCGCACTGAC...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTTTTTCGAGTTCCTTCTaGGTCCTTTCTAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPPEAECLCITYIKQPFSFSSSF*VLSRSS
Trigger: TGAAGACCTAGAAAGGACCCAGAAGGAACTCGAAAA...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTTACAGTCGAGGCAGTaGTTTGCCTCTGTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGLQSRQ*FASVSP
Trigger: CGGAGACACAGAGGCAAACCACTGCCTCGACTGTAA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGACAAAGAGAAACTTTaGGAAATGTGTGACTGGACT +
Preference number: 4 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEDKEKL*EMCDWT
Trigger: AGTCCAGTCACACATTTCCCAAAGTTTCTCTTTGTC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGACAAAGAGAAACTTTaGGAAATGTGTGACTGGACT +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFDKEKL*EMCDWT
Trigger: AGTCCAGTCACACATTTCCCAAAGTTTCTCTTTGTC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGATGACCTCTTACTTGTaGCCCCACAAAAGTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWMTSYL*PHKSPL
Trigger: AAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCAT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTATTATCATTTGCAAGTaGCTGGATGGATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSIIICK*LDGFKV
Trigger: AACTTTGAATCCATCCAGCCACTTGCAAATGATAAT...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACTACTCAGTGAATGGTaGTTCTTGTTGCATATGGTG +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPELLSEW*FLLHMV
Trigger: CACCATATGCAACAAGAACCACCATTCACTGAGTAG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGGTGAGTGGCTTCAGTaGCATGATGAAGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSGEWLQ*HDEEGI
Trigger: GATGCCTTCTTCATCATGCCACTGAAGCCACTCACC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCGAGTCCACTTGGACCTaGAGGACAACACTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGESTWT*RTTLCA
Trigger: GGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTC...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCCCAAGGACAGTTTCTTaGCCTAAAGAATTCTCATAT +
Preference number: 4 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFPRTVS*PKEFSY
Trigger: ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGG...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCCAAGGACAGTTTCTTaGCCTAAAGAATTCTCATAT +
Preference number: 4 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWPRTVS*PKEFSY
Trigger: ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTGCTCTGGTAGTCCATaGTTTCAGCACTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGCSGSP*FQHSAG
Trigger: TCCAGCTGAGTGCTGAAATCATGGACTACCAGAGCA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTTTAGAGACAAACCTTaGGAAGGTATTGTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: LQPPEAECLCITYIKQPFFRDKP*EGIVED
Trigger: ATCTTCGACAATACCTTCTCAAGGTTTGTCTCTAAA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGCTTTATGTGACAGGTaGGGAAGAGCAGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSALCDR*GRAVFP
Trigger: AGGAAACACTGCTCTTCCTCACCTGTCACATAAAGC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGTGAAGGGCTTTATTTaGGGACAGAATCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYVKGFI*GQNHPD
Trigger: GTCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCAC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCAGAGGTCTGGCTGAGTaGAGGGCTTTATTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGRGLAE*RALFED
Trigger: GTCCTCAAATAAAGCCCTTCACTCAGCCAGACCTCT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCTTAGGGCAATGCTTTaGGCTGTGGAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHLRAML*AVERSG
Trigger: GCCAGACCTCTCCACAGCTCAAAGCATTGCCCTAAG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCAGTCCATTCCAGAAATaGCCTCTTACTTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGSPFQK*PLTCGP
Trigger: GGGGCCACAAGTAAGAGGTCATTTCTGGAATGGACT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTCTGGGCAACCTCTTTaGAAGGTTCTATTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTSGQPL*KVLFPV
Trigger: AACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCACGTGGCATGCCTGTaGGGACAAACATCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHHVACL*GQTSGQ
Trigger: TTGGCCTGATGTTTGTCCTCACAGGCATGCCACGTG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTGCATATGGTGCCAGTaGCACTTCAGAAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFCIWCQ*HFRRSS
Trigger: TGATGACCTTCTGAAGTGTCACTGGCACCATATGCA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACGTGATGGGTTCCCCTaGTTCCTGAAATTCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSRDGFP*FLKFFA
Trigger: AGCAAAGAATTTCAGGAAGCAGGGGAACCCATCACG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGTGTTCATGAAGCACTaGTGTAAGGTGTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFVFMKH*CKVSAN
Trigger: GTTGGCAGACACCTTACAGCAGTGCTTCATGAACAC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAAATGGCCTCCTTCTCTaGCATCTGGGCTTTCATGGC +
Preference number: 4 (lower is better)
Translates to: LNMPRCFVAAESTANLSLNGLLL*HLGFHG
Trigger: GCCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATT...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACCCAGGGATCCATCATaGCTCTGTTTACTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSPRDPS*LCLLCY
Trigger: GTAACAGAGTAAACAGAGGCATGATGGATCCCTGGG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTCCAAGGAAGCCGAATaGAAGAGGCCCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGSKEAE*KRPSFS
Trigger: AGAAAAGCTGGGCCTCTTGCATTCGGCTTCCTTGGA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTCAAAGATTCTAGATTaGTCTGGGTTCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPSKILD*SGFSFV
Trigger: AACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACTTCATTGTCAGTGGGTaGGCCAACTCCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHFIVSG*ANSLLA
Trigger: GGCCAACAGGGAGTTGGCCCACCCACTGACAATGAA...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACGTGCGAACCTTGAGCTaGCCCTGGATGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHVRTLS*PWMFSL
Trigger: CAAGGAGAACATCCAGGGCCAGCTCAAGGTTCGCAC...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTCTCTCCTGTTTCCTTaGAAGAAACATAATGAAATG +
Preference number: 4 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSLLFP*KKHNEM
Trigger: CATTTCATTATGTTTCTTCCAAGGAAACAGGAGAGA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCTTCCAAATGAGGCTTaGGTATTGCTCTGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGLPNEA*VLLCSH
Trigger: GTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCGTGAAGGGCTTTATTTaGGGACAGAATCACCCAGAC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGVKGFI*GQNHPD
Trigger: GTCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCAC...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACATCTGGTATCGATATaGAGACGTAACTGTTATTCA +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEHLVSI*RRNCYS
Trigger: TGAATAACAGTTACGTCTTCATATCGATACCAGATG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTGGGAAGCTGGCTAAATaGTGGTTTTTCTTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFGKLAK*WFFLSS
Trigger: ACTGGACAAGAAAAACCAGCATTTAGCCAGCTTCCC...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATAACAATAGCAGTCAGTaGTCAAGGTGTTGCACGCAA +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYNNSSQ*SRCCTQ
Trigger: TTGCGTGCAACACCTTGAGCACTGACTGCTATTGTT...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCCGAATGGCTTCTCTCTaGTTTAATTCCCAACACCTC +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPRMASL*FNSQHL
Trigger: GAGGTGTTGGGAATTAAAGCAGAGAGAAGCCATTCG...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGAGGCAGAGTGTCTCTaGATAACATACATCAAGCAG +
Preference number: 4 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSEAECL*ITYIKQ
Trigger: CTGCTTGATGTATGTTATGCAGAGACACTCTGCCTC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGAGAATCAGTTTCAGTaGGTGTTTCAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYENQFQ*VFQAKR
Trigger: CCTCTTTGCCTGAAACACCCACTGAAACTGATTCTC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTAACATCCACACTGGCTaGCATTTGGGCATTAGATGT +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFNIHTG*HLGIRC
Trigger: ACATCTAATGCCCAAATGCCAGCCAGTGTGGATGTT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGGATGAAGAAGGCATCTaGTATCGATATGAAGACGTA +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWDEEGI*YRYEDV
Trigger: TACGTCTTCATATCGATACCAGATGCCTTCTTCATC...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACCAAGGACAGTTTCTTaGCCTAAAGAATTCTCATAT +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEPRTVS*PKEFSY
Trigger: ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGTTTAGAGACAAACCTTaGGAAGGTATTGTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWFRDKP*EGIVED
Trigger: ATCTTCGACAATACCTTCTCAAGGTTTGTCTCTAAA...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR TCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTGGTCTTTGTGTACATaGCCATCCTTGGTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGWSLCT*PSLVLS
Trigger: GCTTAGAACCAAGGATGGTCATGTACACAAAGACCA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAATCAAAGATTCTAGATTaGTCTGGGTTCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TGSVISSPTGDFLSFGPESKILD*SGFSFV
Trigger: AACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGA...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCAGTGCTCAAGGTGTTaGACGCAAAACATCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHQCSRC*TQNIQL
Trigger: GAGCTGGATGTTTTGCGTGCAACACCTTGAGCACTG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCGAATGGCTTCTCTCTaGTTTAATTCCCAACACCTC +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGRMASL*FNSQHL
Trigger: GAGGTGTTGGGAATTAAAGCAGAGAGAAGCCATTCG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATTGTTCAGGTCAAAGTTaGACACCATCTCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYCSGQS*TPSLES
Trigger: AGACTCAAGAGATGGTGTCCAACTTTGACCTGAACA...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCAAACATGTCTGCAGGTaGGGCAGAAGCTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPKHVCR*GRSSYL
Trigger: TAAATAAGAGCTTCTGCCCCACCTGCAGACATGTTT...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCTACTCAGTGAATGGTaGTTCTTGTTGCATATGGTG +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFLLSEW*FLLHMV
Trigger: CACCATATGCAACAAGAACCACCATTCACTGAGTAG...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTACCACCTGCAGCAGTaGTTCTTCAATTGCTATTTG +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFYHLQQ*FFNCYL
Trigger: CAAATAGCAATTGAAGAACCACTGCTGCAGGTGGTA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTTTTGTAAACAAGAATaGCCGTCTCGATGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTFCKQE*PSRWSL
Trigger: CAAAGACCATCGAGACGGCCATTCTTGTTTACAAAA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR GCA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTAGTTCCCCTACAAAGTaGTTTCTTGGTAAGTGTTTT +
Preference number: 4 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTSSPTK*FLGKCF
Trigger: AAAACACTTACCAAGAAAGCACTTTGTAGGGGAACT...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCTGTTCAGCCGCATTTaGGTCGAGAGAATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHLFSRI*VERISF
Trigger: GAAACTGATTCTCTCGACCCAAATGCGGCTGAACAG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTCATTTGCAAGTGGCTaGATGGATTCAAAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFSFASG*MDSKLA
Trigger: TGCTAACTTTGAATCCATCCAGCCACTTGCAAATGA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGTCTCTCCTGTTTCCTTaGAAGAAACATAATGAAATG +
Preference number: 4 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWSLLFP*KKHNEM
Trigger: CATTTCATTATGTTTCTTCCAAGGAAACAGGAGAGA...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCGATGAAGAAGGCATCTaGTATCGATATGAAGACGTA +
Preference number: 4 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGDEEGI*YRYEDV
Trigger: TACGTCTTCATATCGATACCAGATGCCTTCTTCATC...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAAGCTGGCTAAATGCTaGTTTTTCTTGTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHKLAKC*FFLSSE
Trigger: CTCACTGGACAAGAAAAACCAGCATTTAGCCAGCTT...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCATTATCATTTGCAAGTaGCTGGATGGATTCAAAGTT +
Preference number: 4 (lower is better)
Translates to: TTCSSGSSIAICISLKYPIIICK*LDGFKV
Trigger: AACTTTGAATCCATCCAGCCACTTGCAAATGATAAT...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACGATTTCATCCCCAACTaGCGATTTCCTTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHDFIPN*RFPFIW
Trigger: CCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATC...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR GCA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCTTCTGATTATCATTTaGAAGTGGCTGGATGGATTC +
Preference number: 4 (lower is better)
Translates to: FIKATLKYAKMFCSCREHLLIII*KWLDGF
Trigger: GAATCCATCCAGCCACTTGCAAATGATAATCAGAAG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
3UTR CAA 72 bp CCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTaGGTTCTTAAGTTATCAAAGACTTTTGTTAAGAAG +
Preference number: 4 (lower is better)
Translates to: PGIHHASVYSVT*VLKLSKTFVKK
Trigger: CTTCTTAACAAAAGTCTTTGATAACTTAAGAACCAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
3UTR CAA 72 bp ACTCTGTTACTTTGGTTCTTAAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: TLLLWFLSYQRL*LRRPQCLKVVL
Trigger: TAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACTTAAGAACCAAAGTAACAGAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS CCA 90 bp TGGCACGCGCTCGTGGGTCCACCGCCGGGCAGAACCGAAACTTTCTaGGGCCAAGCGGAAGAGGACGGGAACGCGGTGCTGACGGCCATG +
Preference number: 5 (lower is better)
Translates to: WHALVGPPPGRTETF*GQAEEDGNAVLTAM
Trigger: CATGGCCGTCAGCACCGCGTTCCCGTCCTCTTCCGCTTGGCCCCAGAAAGTTTCGGTTCTGCCCGGCGGTGGACCCACGAGCGCGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS CCA 90 bp CGCCAGAGCTGGTCTGCCTCCTGTCCCTTCCCAGACAACTCCTCCTaGAGTGGGGCCATCTCCTTCACCAGGCGCTCCAGGCTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RQSWSASCPFPDNSS*SGAISFTRRSRLAR
Trigger: CCGGGCCAGCCTGGAGCGCCTGGTGAAGGAGATGGCCCCACTCCAGGAGGAGTTGTCTGGGAAGGGACAGGAGGCAGACCAGCTCTGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 90 bp GCTGGCCTGCTCGGCCTCCAGGGAGGCCAAGGAGCCCTGGATGGCTaGTTCCCGCTGCTGCAAAGCCTGGTAATCGGCCTGCAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AGLLGLQGGQGALDG*FPLLQSLVIGLQGL
Trigger: CAAGCCCTGCAGGCCGATTACCAGGCTTTGCAGCAGCGGGAATCAGCCATCCAGGGCTCCTTGGCCTCCCTGGAGGCCGAGCAGGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp GCCTTCCTTACAGCCAGCAAGCTCGCCTCCATCTGGTCACCCAAGTaGCGGATGCTGGCCTGCTCGGCCTCCAGGGAGGCCAAGGAGCCC +
Preference number: 5 (lower is better)
Translates to: AFLTASKLASIWSPK*RMLACSASREAKEP
Trigger: GGGCTCCTTGGCCTCCCTGGAGGCCGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGATGGAGGCGAGCTTGCTGGCTGTAAGGAAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp GGATGCTGGCCTGCTCGGCCTCCAGGGAGGCCAAGGAGCCCTGGATaGCTGATTCCCGCTGCTGCAAAGCCTGGTAATCGGCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GCWPARPPGRPRSPG*LIPAAAKPGNRPAG
Trigger: CCCTGCAGGCCGATTACCAGGCTTTGCAGCAGCGGGAATCAGCCATCCAGGGCTCCTTGGCCTCCCTGGAGGCCGAGCAGGCCAGCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 90 bp TTGCTGCAGCCCAGCTACTTGGCGCTCCAGGCCCTCTCGCTCCCTTaGGGCTGCCTCTTTGGCGTCCTGGAGCTCCTGGACAGCACAGGC +
Preference number: 5 (lower is better)
Translates to: LLQPSYLALQALSLP*GCLFGVLELLDSTG
Trigger: GCCTGTGCTGTCCAGGAGCTCCAGGACGCCAAAGAGGCAGCCTCAAGGGAGCGAGAGGGCCTGGAGCGCCAAGTAGCTGGGCTGCAGCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TCTGCTAGCTCCTCCTCCCAGGAGCTCGTGTGGGCCAGCAACTCCTaGAGCCGTCGCCAGAGCTGGTCTGCCTCCTGTCCCTTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: SASSSSQELVWASNS*SRRQSWSASCPFPD
Trigger: GTCTGGGAAGGGACAGGAGGCAGACCAGCTCTGGCGACGGCTGCAGGAGTTGCTGGCCCACACGAGCTCCTGGGAGGAGGAGCTAGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TGGGTCTGCTGCTGGCACTGGCTCTCGAGAGCCCTAAGCTCTCTGTaGCGGGCTTCTGCCAGTTGCTGGCACTGCTCCACCTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: WVCCWHWLSRALSSL*RASASCWHCSTSSR
Trigger: GCGGGAGGAGGTGGAGCAGTGCCAGCAACTGGCAGAAGCCCGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp CAGGAGCTCGTGTGGGCCAGCAACTCCTGCAGCCGTCGCCAGAGCTaGTCTGCCTCCTGTCCCTTCCCAGACAACTCCTCCTGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: QELVWASNSCSRRQS*SASCPFPDNSSWSG
Trigger: CCCACTCCAGGAGGAGTTGTCTGGGAAGGGACAGGAGGCAGACCAGCTCTGGCGACGGCTGCAGGAGTTGCTGGCCCACACGAGCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp TTCTCCCGCCTCAACTCTGCTAGCTCCTCCTCCCAGGAGCTCGTGTaGGCCAGCAACTCCTGCAGCCGTCGCCAGAGCTGGTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FSRLNSASSSSQELV*ASNSCSRRQSWSAS
Trigger: GGAGGCAGACCAGCTCTGGCGACGGCTGCAGGAGTTGCTGGCCCACACGAGCTCCTGGGAGGAGGAGCTAGCAGAGTTGAGGCGGGAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp CTGGCACTGGCTCTCGAGAGCCCTAAGCTCTCTGTGCCGGGCTTCTaGCAGTTGCTGGCACTGCTCCACCTCCTCCCGCAGCTGCTGACA +
Preference number: 5 (lower is better)
Translates to: LALALESPKLSVPGF*QLLALLHLLPQLLT
Trigger: TGTCAGCAGCTGCGGGAGGAGGTGGAGCAGTGCCAGCAACTGGCAGAAGCCCGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp GTTGGCCCGGTGCAGCTGCTCTTGCAGCTCAGCGTGCTCCAGCTGTaGTTCCTCGGAGCTGCATTTGGCCTGGGACAGCTCCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: VGPVQLLLQLSVLQL*FLGAAFGLGQLLLQ
Trigger: CTGCAGGAGGAGCTGTCCCAGGCCAAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp ATGGCCTCCTTGGCCTTCCTTACAGCCAGCAAGCTCGCCTCCATCTaGTCACCCAAGTGCCGGATGCTGGCCTGCTCGGCCTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: MASLAFLTASKLASI*SPKCRMLACSASRE
Trigger: CTCCCTGGAGGCCGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGATGGAGGCGAGCTTGCTGGCTGTAAGGAAGGCCAAGGAGGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp CTGGGTCCAGAGGAAGGCTCAGAATTTCGGCCCTCGGTGGCTGTCTaGTCAGCAGTGGTCAGACTCCATGGTGGCACGCGCTCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: LGPEEGSEFRPSVAV*SAVVRLHGGTRSWV
Trigger: GACCCACGAGCGCGTGCCACCATGGAGTCTGACCACTGCTGAGCAGACAGCCACCGAGGGCCGAAATTCTGAGCCTTCCTCTGGACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS GCA 90 bp AGCTCCCTGTTGGCCTGCCGGAGCTCTTCCTCCTGGCTGCCCTCTTaGACCTTGGTATCGTCTAACTGTGCCTCCTGCAGGCCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SSLLACRSSSSWLPS*TLVSSNCASCRPLC
Trigger: GCAGAGGGGCCTGCAGGAGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp GCTGTGTCTGTGTTGGCCCGGTGCAGCTGCTCTTGCAGCTCAGCGTaGTCCAGCTGTGCTTCCTCGGAGCTGCATTTGGCCTGGGACAGC +
Preference number: 5 (lower is better)
Translates to: AVSVLARCSCSCSSA*SSCASSELHLAWDS
Trigger: GCTGTCCCAGGCCAAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGACACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp ACTGGAGTTCACAGGGACCAGGGCCTCATTCTTCTCACCTGCCACTaGCAGTTCTGGGCCAGGCGGCCCAGCAAGCCGCTCGAGCATACC +
Preference number: 5 (lower is better)
Translates to: TGVHRDQGLILLTCH*QFWARRPSKPLEHT
Trigger: GGTATGCTCGAGCGGCTTGCTGGGCCGCCTGGCCCAGAACTGCCAGTGGCAGGTGAGAAGAATGAGGCCCTGGTCCCTGTGAACTCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCGGGCTTCTGCCAGTaGCTGGCACTGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDPGFCQ*LALLHL
Trigger: GAGGTGGAGCAGTGCCAGCAACTGGCAGAAGCCCGG...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGAGGTTTCCCAGACCCTaGCTGGCCCCGACAGACGCC +
Preference number: 5 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAERFPRP*LAPTDA
Trigger: GGCGTCTGTCGGGGCCAGCAAGGGTCTGGGAAACCT...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535325.5
CDS TCA 90 bp GCTTCTGCCAGTTGCTGGCACTGCTCCACCTCCTCCCGCAGCTGCTaGCACTCGCCCTCCTTGCTCTGTAGAATGGCCTCCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ASASCWHCSTSSRSC*HSPSLLCRMASFSA
Trigger: GGCAGAGAAGGAGGCCATTCTACAGAGCAAGGAGGGCGAGTGTCAGCAGCTGCGGGAGGAGGTGGAGCAGTGCCAGCAACTGGCAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp ACATGTTGGCTCACCTGTGCCAGCTGGGTCTCCAGGAACTGCAGCTaGCGGGTCAGAGACCTGACCTCCTGCTCCAGCAGCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TCWLTCASWVSRNCS*RVRDLTSCSSSSFS
Trigger: GGAGAAGGAGCTGCTGGAGCAGGAGGTCAGGTCTCTGACCCGGCAGCTGCAGTTCCTGGAGACCCAGCTGGCACAGGTGAGCCAACATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp CCTTCTCCAGCTCCCTGTTGGCCTGCCGGAGCTCTTCCTCCTGGCTaGCCTCTTGCACCTTGGTATCGTCTAACTGTGCCTCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: PSPAPCWPAGALPPG*PLAPWYRLTVPPAG
Trigger: GCCTGCAGGAGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp CGCCCGACCACATTCTGTAGCTCCTTCTCCAGCTCCCTGTTGGCCTaGCGGAGCTCTTCCTCCTGGCTGCCCTCTTGCACCTTGGTATCG +
Preference number: 5 (lower is better)
Translates to: RPTTFCSSFSSSLLA*RSSSSWLPSCTLVS
Trigger: CGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGAAGGAGCTACAGAATGTGGTCGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp GTTTTGTGCTCCCTCAGGACGGCCTCAGCCATGCTTAGCTGGCTCTaGACCTTGTCCTGGTCATCCAGGGCTGCCCGCATCTTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VLCSLRTASAMLSWL*TLSWSSRAARILAW
Trigger: CCAGGCCAAGATGCGGGCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGAGCACAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp TCTCCTGCCTGGGTCCAGAGGAAGGCTCAGAATTTCGGCCCTCGGTaGCTGTCTGCTCAGCAGTGGTCAGACTCCATGGTGGCACGCGCT +
Preference number: 5 (lower is better)
Translates to: SPAWVQRKAQNFGPR*LSAQQWSDSMVARA
Trigger: AGCGCGTGCCACCATGGAGTCTGACCACTGCTGAGCAGACAGCCACCGAGGGCCGAAATTCTGAGCCTTCCTCTGGACCCAGGCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS CCA 90 bp GGTTACGCCCGACCACATTCTGTAGCTCCTTCTCCAGCTCCCTGTTaGCCTGCCGGAGCTCTTCCTCCTGGCTGCCCTCTTGCACCTTGG +
Preference number: 5 (lower is better)
Translates to: GYARPHSVAPSPAPC*PAGALPPGCPLAPW
Trigger: CCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGAAGGAGCTACAGAATGTGGTCGGGCGTAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp AGTGCCTCCTCCACTCGCTCCTTTTCCACGGTCAGTGCGCAAACCTaGATGCCCAGCTCAGCTGTGTCTGTGTTGGCCCGGTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SASSTRSFSTVSAQT*MPSSAVSVLARCSC
Trigger: GCAGCTGCACCGGGCCAACACAGACACAGCTGAGCTGGGCATCCAGGTTTGCGCACTGACCGTGGAAAAGGAGCGAGTGGAGGAGGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCTGCAGTTGCTCCCCTaGCTGGCTGACAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSLQLLP*LADSCP
Trigger: AGGGCAGCTGTCAGCCAGCAAGGGGAGCAACTGCAG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCCTGAGCCTGCAGCCGTaGGACCTCCCCCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTALSLQP*DLPLMD
Trigger: GTCCATCAGGGGGAGGTCCAACGGCTGCAGGCTCAG...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 90 bp TCCTTCACCAGGCGCTCCAGGCTGGCCCGGGCATCCTCTTTCAGCTaGAGCTCCTTGACCAGCTGTTCCAGTTGGGCACTCTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SFTRRSRLARASSFS*SSLTSCSSWALCCL
Trigger: CAGACAGCAGAGTGCCCAACTGGAACAGCTGGTCAAGGAGCTTCAGCTGAAAGAGGATGCCCGGGCCAGCCTGGAGCGCCTGGTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp GGCACTGCTCCACCTCCTCCCGCAGCTGCTGACACTCGCCCTCCTTaGTCTGTAGAATGGCCTCCTTCTCTGCCATCTGGGCTTTCATGG +
Preference number: 5 (lower is better)
Translates to: GTAPPPPAAADTRPP*SVEWPPSLPSGLSW
Trigger: CCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATTCTACAGAGCAAGGAGGGCGAGTGTCAGCAGCTGCGGGAGGAGGTGGAGCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp ATGCCCAGCTCAGCTGTGTCTGTGTTGGCCCGGTGCAGCTGCTCTTaGAGCTCAGCGTGCTCCAGCTGTGCTTCCTCGGAGCTGCATTTG +
Preference number: 5 (lower is better)
Translates to: MPSSAVSVLARCSCS*SSACSSCASSELHL
Trigger: CAAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGACACAGCTGAGCTGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp CCTCCTCCACTCGCTCCTTTTCCACGGTCAGTGCGCAAACCTGGATaGCCAGCTCAGCTGTGTCTGTGTTGGCCCGGTGCAGCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: PPPLAPFPRSVRKPG*PAQLCLCWPGAAAL
Trigger: AAGAGCAGCTGCACCGGGCCAACACAGACACAGCTGAGCTGGGCATCCAGGTTTGCGCACTGACCGTGGAAAAGGAGCGAGTGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp GATGCTCTTGGGGTCAGAGGAGAAGACCCAGCTGATGGTGAGGCCTaGCTCGGCCACAGTGATGGGGATCAGGCTGTAGGTGCTGGACCT +
Preference number: 5 (lower is better)
Translates to: DALGVRGEDPADGEA*LGHSDGDQAVGAGP
Trigger: AGGTCCAGCACCTACAGCCTGATCCCCATCACTGTGGCCGAGGCAGGCCTCACCATCAGCTGGGTCTTCTCCTCTGACCCCAAGAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CCA 90 bp TTCTGCTCCTCCAGGTCACTCACATGTTGGCTCACCTGTGCCAGCTaGGTCTCCAGGAACTGCAGCTGCCGGGTCAGAGACCTGACCTCC +
Preference number: 5 (lower is better)
Translates to: FCSSRSLTCWLTCAS*VSRNCSCRVRDLTS
Trigger: GGAGGTCAGGTCTCTGACCCGGCAGCTGCAGTTCCTGGAGACCCAGCTGGCACAGGTGAGCCAACATGTGAGTGACCTGGAGGAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp AGCTCCTTCTCCAGCTCCCTGTTGGCCTGCCGGAGCTCTTCCTCCTaGCTGCCCTCTTGCACCTTGGTATCGTCTAACTGTGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSFSSSLLACRSSSS*LPSCTLVSSNCASC
Trigger: GCAGGAGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGAAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp CCTCCTCCCGCAGCTGCTGACACTCGCCCTCCTTGCTCTGTAGAATaGCCTCCTTCTCTGCCATCTGGGCTTTCATGGCCTCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: PPPAAADTRPPCSVE*PPSLPSGLSWPPWP
Trigger: AGGCCAAGGAGGCCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATTCTACAGAGCAAGGAGGGCGAGTGTCAGCAGCTGCGGGAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp TGCCGCCGCACCATCCAGCTGAACTCCCGCTTACAGTCGAGGCAGTaGTTTGCCTCTGTGTCTCCGAGCCATCTCTCCTCAGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: CRRTIQLNSRLQSRQ*FASVSPSHLSSALS
Trigger: GCTCAGTGCTGAGGAGAGATGGCTCGGAGACACAGAGGCAAACCACTGCCTCGACTGTAAGCGGGAGTTCAGCTGGATGGTGCGGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp CCTGAGCCACTGCTATCAGGGGAGCCAGGGCCTTCACTGAGCTTCTaGAAACAGGCTCGGCAGCAGCGCTCCTTTTTGCCACCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: PEPLLSGEPGPSLSF*KQARQQRSFLPPCL
Trigger: CAAGCACGGTGGCAAAAAGGAGCGCTGCTGCCGAGCCTGTTTCCAGAAGCTCAGTGAAGGCCCTGGCTCCCCTGATAGCAGTGGCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS-3UTR CAA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACAGCTGGCTCTGCACCTaGTCCTGGTCATCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDSWLCT*SWSSRA
Trigger: AGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCT...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACCTGCAGCCCAGCTACTaGGCGCTCCAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDLQPSY*ALQALS
Trigger: CGAGAGGGCCTGGAGCGCCAAGTAGCTGGGCTGCAG...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACCTGCAGCTGCCGGCCTaGCTCCTCAAGCTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDLQLPA*LLKLAP
Trigger: AGGGGCCAGCTTGAGGAGCAAGGCCGGCAGCTGCAG...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCTCCACAGGCAGAAGTaGGAATCACCCCTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSLHRQK*ESPLPV
Trigger: CACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS TCA 90 bp AGATGCGGCCACATATCCTGCAGTGGTGCCGCCGCACCATCCAGCTaGACTCCCGCTTACAGTCGAGGCAGTGGTTTGCCTCTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: RCGHISCSGAAAPSS*TPAYSRGSGLPLCL
Trigger: GAGACACAGAGGCAAACCACTGCCTCGACTGTAAGCGGGAGTTCAGCTGGATGGTGCGGCGGCACCACTGCAGGATATGTGGCCGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TCTTGCACCTTGGTATCGTCTAACTGTGCCTCCTGCAGGCCCCTCTaGTCCTCCTCTGGCTTCCCCCAGGCCTCTTGCAGACTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: SCTLVSSNCASCRPL*SSSGFPQASCRLEF
Trigger: GAACTCCAGTCTGCAAGAGGCCTGGGGGAAGCCAGAGGAGGAGCAGAGGGGCCTGCAGGAGGCACAGTTAGACGATACCAAGGTGCAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TGTTGGCCTTTCTCTGCTGTGAGGACCTCAATCAGCTGGGTCTGCTaGTGGCACTGGCTCTCGAGAGCCCTAAGCTCTCTGTGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: CWPFSAVRTSISWVC*WHWLSRALSSLCRA
Trigger: AGCCCGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TCATCGGCCCTCTCCTCCTGCAGTGCCCCTTCACGCTCCGAGCATTaGAGCAGCTCCTGGACATGGGCTCTGTTAAGGGCTTCATTCTGC +
Preference number: 5 (lower is better)
Translates to: SSALSSCSAPSRSEH*SSSWTWALLRASFC
Trigger: GCAGAATGAAGCCCTTAACAGAGCCCATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAGGGCCGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp AGCTGCTGCATGCGCTCCCGTAGCTGCTTCTCCCGCACCTCCAACTaGTCCAGCTCTAGTCGCATCTCATCAAAGCCCTCCAATGCCTCG +
Preference number: 5 (lower is better)
Translates to: SCCMRSRSCFSRTSN*SSSSRISSKPSNAS
Trigger: CGAGGCATTGGAGGGCTTTGATGAGATGCGACTAGAGCTGGACCAGTTGGAGGTGCGGGAGAAGCAGCTACGGGAGCGCATGCAGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp TTCTCTGCTGTGAGGACCTCAATCAGCTGGGTCTGCTGCTGGCACTaGCTCTCGAGAGCCCTAAGCTCTCTGTGCCGGGCTTCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: FSAVRTSISWVCCWH*LSRALSSLCRASAS
Trigger: ACTGGCAGAAGCCCGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp TGGCCTTTCTCTGCTGTGAGGACCTCAATCAGCTGGGTCTGCTGCTaGCACTGGCTCTCGAGAGCCCTAAGCTCTCTGTGCCGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: WPFSAVRTSISWVCC*HWLSRALSSLCRAS
Trigger: AGAAGCCCGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp GCCAGCTCACGGGCTTCATTGTCAGTGGGTGGGCCAACTCCCTGTTaGCCTTTCTCTGCTGTGAGGACCTCAATCAGCTGGGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASSRASLSVGGPTPC*PFSAVRTSISWVCC
Trigger: GCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCACCCACTGACAATGAAGCCCGTGAGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp ACAAGGGTTTTGTGCTCCCTCAGGACGGCCTCAGCCATGCTTAGCTaGCTCTGCACCTTGTCCTGGTCATCCAGGGCTGCCCGCATCTTG +
Preference number: 5 (lower is better)
Translates to: TRVLCSLRTASAMLS*LCTLSWSSRAARIL
Trigger: CAAGATGCGGGCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGAGCACAAAACCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTCCTCTCTGTCTGCAGTaGCTCCCCTTGCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAPLCLQ*LPLLAD
Trigger: GTCAGCCAGCAAGGGGAGCAACTGCAGACAGAGAGG...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGCAAGTGAGGCGAACGTaGTCCTCCGCTGCAGTGCGC +
Preference number: 5 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKQVRRT*SSAAVR
Trigger: GCGCACTGCAGCGGAGGACAACGTTCGCCTCACTTG...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTATCGGCCTGCAGGGCTaGCAGCTTGCCCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSIGLQG*QLALQE
Trigger: CTCCTGGAGGGCAAGCTGCAAGCCCTGCAGGCCGAT...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGAGCTCACGGGCTTCATaGTCAGTGGGTGGGCCAACT +
Preference number: 5 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAESSRAS*SVGGPT
Trigger: AGTTGGCCCACCCACTGACAATGAAGCCCGTGAGCT...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTCAGCAGCGCTCCTTTTaGCCACCGTGCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAQQRSF*PPCLLR
Trigger: CCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCTG...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGTCTGTATTTGCTCCTaGGCCTCCTGTGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAVCICS*ASCGLG
Trigger: CCCCAGGCCACAGGAGGCCAAGGAGCAAATACAGAC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTGGGCAAATGGGCTGTaGGGGAACCTGTCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAWANGL*GNLSGG
Trigger: CCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCA...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS TCA 90 bp CATTGTCAGTGGGTGGGCCAACTCCCTGTTGGCCTTTCTCTGCTGTaGGGACCTCAATCAGCTGGGTCTGCTGCTGGCACTGGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: HCQWVGQLPVGLSLL*GPQSAGSAAGTGSR
Trigger: TCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCACCCACTGACAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TGCAGCTCCTTCACAGTGTTCTGGGTGGCCTGGGTGACCTCCCACTaGTTCTGGAGCTCAGCTACCAAGCAAGTGAGGCGAACGTTGTCC +
Preference number: 5 (lower is better)
Translates to: CSSFTVFWVAWVTSH*FWSSATKQVRRTLS
Trigger: GGACAACGTTCGCCTCACTTGCTTGGTAGCTGAGCTCCAGAAGCAGTGGGAGGTCACCCAGGCCACCCAGAACACTGTGAAGGAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp GGCTTCATTGTCAGTGGGTGGGCCAACTCCCTGTTGGCCTTTCTCTaGTGTGAGGACCTCAATCAGCTGGGTCTGCTGCTGGCACTGGCT +
Preference number: 5 (lower is better)
Translates to: GFIVSGWANSLLAFL*CEDLNQLGLLLALA
Trigger: AGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCACCCACTGACAATGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp CCGCACCATCCAGCTGAACTCCCGCTTACAGTCGAGGCAGTGGTTTaGCTCTGTGTCTCCGAGCCATCTCTCCTCAGCACTGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PHHPAELPLTVEAVV*LCVSEPSLLSTELL
Trigger: CAGAAGCTCAGTGCTGAGGAGAGATGGCTCGGAGACACAGAGGCAAACCACTGCCTCGACTGTAAGCGGGAGTTCAGCTGGATGGTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp TCCTTCACAGTGTTCTGGGTGGCCTGGGTGACCTCCCACTGCTTCTaGAGCTCAGCTACCAAGCAAGTGAGGCGAACGTTGTCCTCCGCT +
Preference number: 5 (lower is better)
Translates to: SFTVFWVAWVTSHCF*SSATKQVRRTLSSA
Trigger: AGCGGAGGACAACGTTCGCCTCACTTGCTTGGTAGCTGAGCTCCAGAAGCAGTGGGAGGTCACCCAGGCCACCCAGAACACTGTGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp ACAGCTTCCTCAGCAGCCTGCAGCTGCCGGCCTTGCTCCTCAAGCTaGCCCCTGAGGCTCTTGCACTCTTCACCAGCATTCTTAAGTCTG +
Preference number: 5 (lower is better)
Translates to: TASSAACSCRPCSSS*PLRLLHSSPAFLSL
Trigger: CAGACTTAAGAATGCTGGTGAAGAGTGCAAGAGCCTCAGGGGCCAGCTTGAGGAGCAAGGCCGGCAGCTGCAGGCTGCTGAGGAAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACAAGCGGATCCCATCATaGGCTCCTTTCACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDKRIPS*APFTLA
Trigger: GGCCAAGGTGAAAGGAGCCAATGATGGGATCCGCTT...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCAAGTGAGGCGAACGTaGTCCTCCGCTGCAGTGCGC +
Preference number: 5 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSQVRRT*SSAAVR
Trigger: GCGCACTGCAGCGGAGGACAACGTTCGCCTCACTTG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTCTGCCCTCTTGCACCTaGGTATCGTCTAACTGTGCC +
Preference number: 5 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSLPSCT*VSSNCA
Trigger: GGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAG...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTGGGCCAACTCCCTGTaGGCCTTTCTCTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAWANSL*AFLCCE
Trigger: CTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCAGGGCTGCCCGCATCTaGGCCTGGAGGTCCACCACC +
Preference number: 5 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFRAARI*AWRSTT
Trigger: GGTGGTGGACCTCCAGGCCAAGATGCGGGCAGCCCT...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCTGCAGCCCAGCTACTaGGCGCTCCAGGCCCTCTCG +
Preference number: 5 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSLQPSY*ALQALS
Trigger: CGAGAGGGCCTGGAGCGCCAAGTAGCTGGGCTGCAG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGTGCCAGAGAGCATCCTaGTCCCTGAGCAGCTCTATC +
Preference number: 5 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAECQRAS*SLSSSI
Trigger: GATAGAGCTGCTCAGGGACAAGGATGCTCTCTGGCA...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGAGCCCAGGGGCTGAGTaGATGATTTTGGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAESPGAE*MILEQL
Trigger: CAGCTGCTCCAAAATCATCAACTCAGCCCCTGGGCT...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS CCA 90 bp GTAGAATGGCCTCCTTCTCTGCCATCTGGGCTTTCATGGCCTCCTTaGCCTTCCTTACAGCCAGCAAGCTCGCCTCCATCTGGTCACCCA +
Preference number: 5 (lower is better)
Translates to: VEWPPSLPSGLSWPP*PSLQPASSPPSGHP
Trigger: TGGGTGACCAGATGGAGGCGAGCTTGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp CACTCGCCCTCCTTGCTCTGTAGAATGGCCTCCTTCTCTGCCATCTaGGCTTTCATGGCCTCCTTGGCCTTCCTTACAGCCAGCAAGCTC +
Preference number: 5 (lower is better)
Translates to: HSPSLLCRMASFSAI*AFMASLAFLTASKL
Trigger: GAGCTTGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATTCTACAGAGCAAGGAGGGCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp TGCAGTGCCCCTTCACGCTCCGAGCATTGCAGCAGCTCCTGGACATaGGCTCTGTTAAGGGCTTCATTCTGCTCCTTCAGCTGCTGCACA +
Preference number: 5 (lower is better)
Translates to: CSAPSRSEHCSSSWT*ALLRASFCSFSCCT
Trigger: TGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAGAGCCCATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAAGGGGCACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTGTCCGAGCTCAGCTTaGGCTGCAGAAAGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKCPSSA*AAERGF
Trigger: GAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGACA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTATCGGCCTGCAGGGCTaGCAGCTTGCCCTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGIGLQG*QLALQE
Trigger: CTCCTGGAGGGCAAGCTGCAAGCCCTGCAGGCCGAT...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGAGCTCACGGGCTTCATaGTCAGTGGGTGGGCCAACT +
Preference number: 5 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKSSRAS*SVGGPT
Trigger: AGTTGGCCCACCCACTGACAATGAAGCCCGTGAGCT...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCTGAGCCTGCAGCCGTaGGACCTCCCCCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: TLAGIWALDVVYTQPLQALSLQP*DLPLMD
Trigger: GTCCATCAGGGGGAGGTCCAACGGCTGCAGGCTCAG...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTTTCTCCTTGTGGGAGTaGCATCGGGTCGTGGGAATG +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAFSLWE*HRVVGM
Trigger: CATTCCCACGACCCGATGCAACTCCCACAAGGAGAA...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTTCTCCTTGTGGGAGTaGCATCGGGTCGTGGGAATG +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAFSLWE*HRVVGM
Trigger: CATTCCCACGACCCGATGCAACTCCCACAAGGAGAA...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGCTCTGTAGAGTCCACTaGGACCTGGAGGACAACACT +
Preference number: 5 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAELCRVH*DLEDNT
Trigger: AGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAG...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS TCA 90 bp GGTTCTTGCCGGCCCTTTGTGTCTGATGCCGTATCTGCCTTCTGCTaGGCCATGGCTAGCCAGCCTGGGAAGCTGGCTAAATGCTGGTTT +
Preference number: 5 (lower is better)
Translates to: GSCRPFVSDAVSAFC*AMASQPGKLAKCWF
Trigger: AAACCAGCATTTAGCCAGCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGGCAGATACGGCATCAGACACAAAGGGCCGGCAAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 90 bp AGCCGCTCGAGCATACCCACCTGCTGGCTGAGGTGGTCTTTGTCCTaGATGAGCTGCTTCTTCTGCTCCTCCAGGTCACTCACATGTTGG +
Preference number: 5 (lower is better)
Translates to: SRSSIPTCWLRWSLS*MSCFFCSSRSLTCW
Trigger: CCAACATGTGAGTGACCTGGAGGAGCAGAAGAAGCAGCTCATTCAGGACAAAGACCACCTCAGCCAGCAGGTGGGTATGCTCGAGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TTAAGGGCTTCATTCTGCTCCTTCAGCTGCTGCACAAGGGTTTTGTaGTCCCTCAGGACGGCCTCAGCCATGCTTAGCTGGCTCTGCACC +
Preference number: 5 (lower is better)
Translates to: LRASFCSFSCCTRVL*SLRTASAMLSWLCT
Trigger: GGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TCCTGGACATGGGCTCTGTTAAGGGCTTCATTCTGCTCCTTCAGCTaGTGCACAAGGGTTTTGTGCTCCCTCAGGACGGCCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SWTWALLRASFCSFS*CTRVLCSLRTASAM
Trigger: CATGGCTGAGGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAGAGCCCATGTCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp GGAGGCCATGGTGAGTTTGCCTTTCTTGTCTGTATGTCTCCTGCCTaGGTCCAGAGGAAGGCTCAGAATTTCGGCCCTCGGTGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GGHGEFAFLVCMSPA*VQRKAQNFGPRWLS
Trigger: AGACAGCCACCGAGGGCCGAAATTCTGAGCCTTCCTCTGGACCCAGGCAGGAGACATACAGACAAGAAAGGCAAACTCACCATGGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS CCA 90 bp CCGTATCTGCCTTCTGCTGAGCCATGGCTAGCCAGCCTGGGAAGCTaGCTAAATGCTGGTTTTTCTTGTCCAGTGAGTCCCGTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PYLPSAEPWLASLGS*LNAGFSCPVSPVWP
Trigger: AGGCCACACGGGACTCACTGGACAAGAAAAACCAGCATTTAGCCAGCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGGCAGATACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp CCTTGCTCTGTAGAATGGCCTCCTTCTCTGCCATCTGGGCTTTCATaGCCTCCTTGGCCTTCCTTACAGCCAGCAAGCTCGCCTCCATCT +
Preference number: 5 (lower is better)
Translates to: PCSVEWPPSLPSGLS*PPWPSLQPASSPPS
Trigger: AGATGGAGGCGAGCTTGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATTCTACAGAGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp GCCTCTGTGTCTCCGAGCCATCTCTCCTCAGCACTGAGCTTCTGCTaGAATTCCAGGGCATCTGACTTCTGCCAGAGAGCATCCTTGTCC +
Preference number: 5 (lower is better)
Translates to: ASVSPSHLSSALSFC*NSRASDFCQRASLS
Trigger: GGACAAGGATGCTCTCTGGCAGAAGTCAGATGCCCTGGAATTCCAGCAGAAGCTCAGTGCTGAGGAGAGATGGCTCGGAGACACAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTTGTCCGAGCTCAGCTTaGGCTGCAGAAAGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSCPSSA*AAERGF
Trigger: GAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGACA...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTCTGCAGTTGCTCCCCTaGCTGGCTGACAGCTGCCCT +
Preference number: 5 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPLQLLP*LADSCP
Trigger: AGGGCAGCTGTCAGCCAGCAAGGGGAGCAACTGCAG...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTCCTCGGAGCTGCATTaGGCCTGGGACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSSSELH*AWDSSS
Trigger: GGAGGAGCTGTCCCAGGCCAAATGCAGCTCCGAGGA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTCCTCGGAGCTGCATTaGGCCTGGGACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSSELH*AWDSSS
Trigger: GGAGGAGCTGTCCCAGGCCAAATGCAGCTCCGAGGA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTCTGCAGCTGCCGGCCTaGCTCCTCAAGCTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLLQLPA*LLKLAP
Trigger: AGGGGCCAGCTTGAGGAGCAAGGCCGGCAGCTGCAG...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCCCTGGATGTTCTCCTaGTGGGAGTTGCATCGGGTC +
Preference number: 5 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVPWMFS*WELHRV
Trigger: GACCCGATGCAACTCCCACAAGGAGAACATCCAGGG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTGGCAGAGCATCCCTTaGGGTGTGACAACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKWQSIP*GVTTAE
Trigger: CTCAGCTGTTGTCACACCCAAAGGGATGCTCTGCCA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTTGGGTGTTTAAACCTTaGGCAGAGCATCCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSWVFKP*AEHPFG
Trigger: CCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCCA...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGCCAAACTGGGACCTTTaGTCAGATGCTCTGTTCACC +
Preference number: 5 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEPNWDL*SDALFT
Trigger: GGTGAACAGAGCATCTGACAAAAGGTCCCAGTTTGG...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CCCGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTGGTGTGTGGTGGGTTaGGGGTCTCTGTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: PVSLPALGPVHLESSVLRWCVVG*GSLLDL
Trigger: CAAGTCCAACAGAGACCCCAAACCCACCACACACCA...CCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCCTGGAGGACAACACTTaGTGCCAAACGTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTALEDNT*CQTCLL
Trigger: AAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAG...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS GCA 90 bp TGGACATGGGCTCTGTTAAGGGCTTCATTCTGCTCCTTCAGCTGCTaGACAAGGGTTTTGTGCTCCCTCAGGACGGCCTCAGCCATGCTT +
Preference number: 5 (lower is better)
Translates to: WTWALLRASFCSFSC*TRVLCSLRTASAML
Trigger: AAGCATGGCTGAGGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAGAGCCCATGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp CATTGCAGCAGCTCCTGGACATGGGCTCTGTTAAGGGCTTCATTCTaGTCCTTCAGCTGCTGCACAAGGGTTTTGTGCTCCCTCAGGACG +
Preference number: 5 (lower is better)
Translates to: HCSSSWTWALLRASF*SFSCCTRVLCSLRT
Trigger: CGTCCTGAGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAGAGCCCATGTCCAGGAGCTGCTGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp GCCGGCCCTTTGTGTCTGATGCCGTATCTGCCTTCTGCTGAGCCATaGCTAGCCAGCCTGGGAAGCTGGCTAAATGCTGGTTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: AGPLCLMPYLPSAEP*LASLGSWLNAGFSC
Trigger: ACAAGAAAAACCAGCATTTAGCCAGCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGGCAGATACGGCATCAGACACAAAGGGCCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp CCTGCCCAGCAACCTACCATACCTTGCAAGTCTCGGATGATTCTCTaGAGCTGGCTCTCTGCATTGGTGGAGGCCATGGTGAGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: PAQQPTIPCKSRMIL*SWLSALVEAMVSLP
Trigger: AGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTGCTGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS-3UTR CAA 90 bp GCTGGTGTGTGGTGGGTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACGAGGCCATGGTGAGTTaGCCTTTCTTGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: AGVWWVWGLCWTWPGVPDEAMVS*PFLSVC
Trigger: ACATACAGACAAGAAAGGCAAACTCACCATGGCCTC...GTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACCCACCACACACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCGCACTCTGCTGTCTGTaGACCTCCTCGACCTTGGTT +
Preference number: 5 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVALCCL*TSSTLV
Trigger: AACCAAGGTCGAGGAGGTCAACAGACAGCAGAGTGC...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACTTCCCCCAGGCCTCTaGCAGACTGGAGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLELPPGL*QTGVHR
Trigger: CCTGTGAACTCCAGTCTGCAAGAGGCCTGGGGGAAG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTTGCTGCACAAGGGTTTaGTGCTCCCTCAGGACGGCC +
Preference number: 5 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPCCTRV*CSLRTA
Trigger: GGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCA...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTGCTGCACAAGGGTTTaGTGCTCCCTCAGGACGGCC +
Preference number: 5 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVECCTRV*CSLRTA
Trigger: GGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCTCAGCTGTGTCTGTGTaGGCCCGGTGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TLAGIWALDVVYTQPLQASAVSV*ARCSCS
Trigger: AGAGCAGCTGCACCGGGCCAACACAGACACAGCTGA...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTGGCCCTCTCGCTCCCTaGAGGCTGCCTCTTTGGCGT +
Preference number: 5 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLGPLAP*RLPLWR
Trigger: ACGCCAAAGAGGCAGCCTCAAGGGAGCGAGAGGGCC...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCAAGCTCTCCTTCTCTaGCTGCAGCCCAGCTACTTG +
Preference number: 5 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSQALLL*LQPSYL
Trigger: CAAGTAGCTGGGCTGCAGCAAGAGAAGGAGAGCTTG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTAGGGCAGCCCCCTCCTaGTCCTTCCTCAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: QPPEAECLCITYIKQPFSRAAPS*SFLSMA
Trigger: GGCCATGCTGAGGAAGGACAAGGAGGGGGCTGCCCT...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCCATTCCTCTCACGATTaGTCACCTCCTGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAHSSHD*SPPGRV
Trigger: AACTCTGCCAGGAGGTGACAAATCGTGAGAGGAATG...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGGTCCCCTGGCACCGACTCGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTTCCTCGAGATACTTCTaGGTTCTGTTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: GSPGTDSHDGCVPPFPRSSSRYF*VLLRSS
Trigger: GGATGACCTCAACAGAACCAAGAAGTATCTCGAGGA...ACTCCTGGGAAAAGGAGGTACACAGCCATCATGCGAGTCGGTGCCAGGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCAGTCGAGGCAGTGGTTaGCCTCTGTGTCTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFSRGSG*PLCLRA
Trigger: GGCTCGGAGACACAGAGGCAAACCACTGCCTCGACT...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCAGCAGCGCTCCTTTTaGCCACCGTGCTTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSQQRSF*PPCLLR
Trigger: CCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCTG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGTCTGTATTTGCTCCTaGGCCTCCTGTGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KLGPFVRCSVHPWKNLGPVCICS*ASCGLG
Trigger: CCCCAGGCCACAGGAGGCCAAGGAGCAAATACAGAC...AGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTGCCTGTAGTCTGTATTaGCTCCTTGGCCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSACSLY*LLGLLW
Trigger: CCACAGGAGGCCAAGGAGCAAATACAGACTACAGGC...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTCTCCACAGGCAGAAGTaGGAATCACCCCTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSLHRQK*ESPLPV
Trigger: CACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAG...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCTCCACAGGCAGAAGTaGGAATCACCCCTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWLHRQK*ESPLPV
Trigger: CACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTGGGCAAATGGGCTGTaGGGGAACCTGTCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEWANGL*GNLSGG
Trigger: CCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGCAGATAAGAATGAATaGGGGTCCCAGACCCACCAT +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAADKNE*GSQTHH
Trigger: ATGGTGGGTCTGGGACCCCAATTCATTCTTATCTGC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS TCA 90 bp CCATCTCTCCTCAGCACTGAGCTTCTGCTGGAATTCCAGGGCATCTaGCTTCTGCCAGAGAGCATCCTTGTCCCTGAGCAGCTCTATCAG +
Preference number: 5 (lower is better)
Translates to: PSLLSTELLLEFQGI*LLPESILVPEQLYQ
Trigger: CTGATAGAGCTGCTCAGGGACAAGGATGCTCTCTGGCAGAAGTCAGATGCCCTGGAATTCCAGCAGAAGCTCAGTGCTGAGGAGAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TTTGCCTCTGTGTCTCCGAGCCATCTCTCCTCAGCACTGAGCTTCTaGTGGAATTCCAGGGCATCTGACTTCTGCCAGAGAGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: FASVSPSHLSSALSF*WNSRASDFCQRASL
Trigger: CAAGGATGCTCTCTGGCAGAAGTCAGATGCCCTGGAATTCCAGCAGAAGCTCAGTGCTGAGGAGAGATGGCTCGGAGACACAGAGGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 90 bp GCACAATTCCTCATCTGTGATGATATCAAACACAGCGTCGTCCGGTaGCCTGTAGTCTGTATTTGCTCCTTGGCCTCCTGTGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: AQFLICDDIKHSVVR*PVVCICSLASCGLG
Trigger: CCCCAGGCCACAGGAGGCCAAGGAGCAAATACAGACTACAGGCCACCGGACGACGCTGTGTTTGATATCATCACAGATGAGGAATTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CCA 90 bp CAGACGCCTGTTCAGCCGCATTTGGGTCGAGAGAATCAGTTTCAGTaGGTGTTTCAGGCAAAGAGGAGCCGGACTCCTGTATCTGGCACA +
Preference number: 5 (lower is better)
Translates to: QTPVQPHLGRENQFQ*VFQAKRSRTPVSGT
Trigger: TGTGCCAGATACAGGAGTCCGGCTCCTCTTTGCCTGAAACACCCACTGAAACTGATTCTCTCGACCCAAATGCGGCTGAACAGGCGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535325.5
CDS-3UTR CAA 90 bp AAACATTGCCTGAGCCCTTCAACGCCTCGGGGGCTAAGAGTGGCCGGTGCAGAGTTCTGTCACAGCATCTaGCAAGTCTCGGATGATTCT +
Preference number: 5 (lower is better)
Translates to: KHCLSPSTPRGLRVAGAEFCHSI*QVSDDS
Trigger: AGAATCATCCGAGACTTGCAAGATGCTGTGACAGAA...CTCTGCACCGGCCACTCTTAGCCCCCGAGGCGTTGAAGGGCTCAGGCAATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTAGCTCTGAGATAGACTaGACAAAGCGGATCCCATCA +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSASSEID*TKRIPS
Trigger: TGATGGGATCCGCTTTGTCAAGTCTATCTCAGAGCT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCCCTCCAATGCCTCGTaGTTTAGGGGGCTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWPSNAS*FRGLFR
Trigger: CCTGAACAGCCCCCTAAACAACGAGGCATTGGAGGG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTGACCAGCTGTTCCAGTaGGGCACTCTGCTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSDQLFQ*GTLLSV
Trigger: AACAGACAGCAGAGTGCCCAACTGGAACAGCTGGTC...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACAGGTCACTCACATGTaGGCTCACCTGTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLEQVTHM*AHLCQL
Trigger: CAGCTGGCACAGGTGAGCCAACATGTGAGTGACCTG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCCAGGTCACTCACATGTaGGCTCACCTGTGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSQVTHM*AHLCQL
Trigger: CAGCTGGCACAGGTGAGCCAACATGTGAGTGACCTG...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACTTCCCCCAGGCCTCTaGCAGACTGGAGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSELPPGL*QTGVHR
Trigger: CCTGTGAACTCCAGTCTGCAAGAGGCCTGGGGGAAG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTTCACGCTCCGAGCATaGCAGCAGCTCCTGGACATG +
Preference number: 5 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEFTLRA*QQLLDM
Trigger: CATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGGGCCCTCTCGCTCCCTaGAGGCTGCCTCTTTGGCGT +
Preference number: 5 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWGPLAP*RLPLWR
Trigger: ACGCCAAAGAGGCAGCCTCAAGGGAGCGAGAGGGCC...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CGTGTCTTTGCCTGCTCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCCACTCTGCAAGATGGTaGCTAGTGCAGCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RVFACSWSSPPGIQCVEVHSARW*LVQLSF
Trigger: GAAGCTGAGCTGCACTAGCAACCATCTTGCAGAGTG...GACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGAGCAGGCAAAGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAGGGCAGCCCCCTCCTaGTCCTTCCTCAGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWRAAPS*SFLSMA
Trigger: GGCCATGCTGAGGAAGGACAAGGAGGGGGCTGCCCT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCTACTTCTTGGTTCTGTaGAGGTCATCCAGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAYFLVL*RSSRSA
Trigger: TGCTGACCTGGATGACCTCAACAGAACCAAGAAGTA...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAACCCTGGATGTTCTCCTaGTGGGAGTTGCATCGGGTC +
Preference number: 5 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQPWMFS*WELHRV
Trigger: GACCCGATGCAACTCCCACAAGGAGAACATCCAGGG...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGCCCTGGATGTTCTCCTaGTGGGAGTTGCATCGGGTC +
Preference number: 5 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWPWMFS*WELHRV
Trigger: GACCCGATGCAACTCCCACAAGGAGAACATCCAGGG...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGTGGCAGAGCATCCCTTaGGGTGTGACAACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQWQSIP*GVTTAE
Trigger: CTCAGCTGTTGTCACACCCAAAGGGATGCTCTGCCA...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSVYTQP*QAPSTV
Trigger: CACTGTACTTGGGGCCTGCAATGGCTGTGTGTACAC...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTAAGGTGAGCTATCTGTaGTTGGGGAAGAAAAGGACC +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAKVSYL*LGKKRT
Trigger: GGTCCTTTTCTTCCCCAACAACAGATAGCTCACCTT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGCCAAACTGGGACCTTTaGTCAGATGCTCTGTTCACC +
Preference number: 5 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKPNWDL*SDALFT
Trigger: GGTGAACAGAGCATCTGACAAAAGGTCCCAGTTTGG...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGGTTTGGGGTCTCTGTaGGACTTGGCCTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEGLGSL*DLAWSP
Trigger: GGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTGTCTCCGCAGTATCCTaGGAAAGCCAAGCACTCAAA +
Preference number: 5 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPVSAVS*ESQALK
Trigger: TTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGAC...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTGAATGGTGGTTCTTGTaGCATATGGTGCCAGTGACA +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSAEWWFL*HMVPVT
Trigger: TGTCACTGGCACCATATGCAACAAGAACCACCATTC...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCGAATGGTGGTTCTTGTaGCATATGGTGCCAGTGACA +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTAEWWFL*HMVPVT
Trigger: TGTCACTGGCACCATATGCAACAAGAACCACCATTC...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTCAGTGCTCAAGGTGTaGCACGCAAAACATCCAGCT +
Preference number: 5 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPSVLKV*HAKHPA
Trigger: AGCTGGATGTTTTGCGTGCAACACCTTGAGCACTGA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS GCA 90 bp AGCAGCGCTCCTTTTTGCCACCGTGCTTGCTCAGGACGTAGTTGTTaGAGCAGTAGTAACAGAAGATGCGGCCACATATCCTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: SSAPFCHRACSGRSC*SSSNRRCGHISCSG
Trigger: ACCACTGCAGGATATGTGGCCGCATCTTCTGTTACTACTGCTGCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp TTGATCATCAGTTCTCCAGACTTCAGCAGGCAGATTTCCGAATCCTaGCCCACGGGCATGTCTTCAGTGTCCTCAGGCGTTAGCGAGGTT +
Preference number: 5 (lower is better)
Translates to: LIISSPDFSRQISES*PTGMSSVSSGVSEV
Trigger: AACCTCGCTAACGCCTGAGGACACTGAAGACATGCCCGTGGGGCAGGATTCGGAAATCTGCCTGCTGAAGTCTGGAGAACTGATGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS GCA 90 bp GTCCCTCAAAACCAAACTCAGCCTGCCCAGCAACCTACCATACCTTaGAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCTGCATTGGTG +
Preference number: 5 (lower is better)
Translates to: VPQNQTQPAQQPTIP*KSRMILWSWLSALV
Trigger: CACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTGCTGGGCAGGCTGAGTTTGGTTTTGAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CCA 90 bp CTCAGTCAGCTCATAGAGTTGGCCCACAATGTCCGAGCTCAGCTTTaGCTGCAGAAAGGGGCTTCTTGCATAGTACCAGTCACTGGTCAC +
Preference number: 5 (lower is better)
Translates to: LSQLIELAHNVRAQL*LQKGASCIVPVTGH
Trigger: GTGACCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGACATTGTGGGCCAACTCTATGAGCTGACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAAGCGGATCCCATCATaGGCTCCTTTCACCTTGGCC +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLEKRIPS*APFTLA
Trigger: GGCCAAGGTGAAAGGAGCCAATGATGGGATCCGCTT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AGAAAATCTCTCCACAGGCAGAAGTTGGAATCACCCCTGCCCGTGAAACTCTCCTCCTCCTGGCAAATGTaGGCCAGGCAGCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: RKSLHRQKLESPLPVKLSSSWQM*ARQHPS
Trigger: ACTTGGATGCTGCCTGGCCAACATTTGCCAGGAGGA...GGAGAGTTTCACGGGCAGGGGTGATTCCAACTTCTGCCTGTGGAGAGATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGGTTGGACACCATCTCTaGAGTCTGCAGGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQVGHHL*SLQVAA
Trigger: AGCAGCTACCTGCAGACTCAAGAGATGGTGTCCAAC...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGTTCTTGCCGGCCCTTaGTGTCTGATGCCGTATCTG +
Preference number: 5 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEVLAGP*CLMPYL
Trigger: CAGATACGGCATCAGACACAAAGGGCCGGCAAGAAC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAGACCAGCTGTTCCAGTaGGGCACTCTGCTGTCTGTT +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLEDQLFQ*GTLLSV
Trigger: AACAGACAGCAGAGTGCCCAACTGGAACAGCTGGTC...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCTGCCCTCTTGCACCTaGGTATCGTCTAACTGTGCC +
Preference number: 5 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGLPSCT*VSSNCA
Trigger: GGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTGGGCCAACTCCCTGTaGGCCTTTCTCTGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LQPPEAECLCITYIKQPFWANSL*AFLCCE
Trigger: CTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCA...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAAGCTGGCTCTGCACCTaGTCCTGGTCATCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TGSVISSPTGDFLSFGPESWLCT*SWSSRA
Trigger: AGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCT...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACAAGCTCTCCTTCTCTaGCTGCAGCCCAGCTACTTG +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLEQALLL*LQPSYL
Trigger: CAAGTAGCTGGGCTGCAGCAAGAGAAGGAGAGCTTG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGTCCTCGAGATACTTCTaGGTTCTGTTGAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKSSRYF*VLLRSS
Trigger: GGATGACCTCAACAGAACCAAGAAGTATCTCGAGGA...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTGCCAGAGAGCATCCTaGTCCCTGAGCAGCTCTATC +
Preference number: 5 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVECQRAS*SLSSSI
Trigger: GATAGAGCTGCTCAGGGACAAGGATGCTCTCTGGCA...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGCCTGTAGTCTGTATTaGCTCCTTGGCCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFACSLY*LLGLLW
Trigger: CCACAGGAGGCCAAGGAGCAAATACAGACTACAGGC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TCTTGGTCCAGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGGCCTGTAGTCTGTATTaGCTCCTTGGCCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: SWSSPPGIQCVEVKHSVEACSLY*LLGLLW
Trigger: CCACAGGAGGCCAAGGAGCAAATACAGACTACAGGC...CTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACTGGACCAAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCCAGGGGCTGAGTaGATGATTTTGGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLESPGAE*MILEQL
Trigger: CAGCTGCTCCAAAATCATCAACTCAGCCCCTGGGCT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCTGGGTGTTTAAACCTTaGGCAGAGCATCCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIWVFKP*AEHPFG
Trigger: CCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCCA...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CGCATGATGGCTGTGTACCTCCTTTTCCCAGGAGTACCTGAGGGCGTCACAGCCAGTGAAGGGCTTTATTaGAGGACAGAATCACCCAGA +
Preference number: 5 (lower is better)
Translates to: RMMAVYLLFPGVPEGVTASEGLY*RTESPR
Trigger: TCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCACT...GGCTGTGACGCCCTCAGGTACTCCTGGGAAAAGGAGGTACACAGCCATCATGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSVYTQP*QAPSTV
Trigger: CACTGTACTTGGGGCCTGCAATGGCTGTGTGTACAC...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTTGGTGTGTGGTGGGTTaGGGGTCTCTGTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGWCVVG*GSLLDL
Trigger: CAAGTCCAACAGAGACCCCAAACCCACCACACACCA...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCAAAAGTCCTCTTTGTaGGTGGTGAGGTTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSQKSSL*VVRLWL
Trigger: CAGCCACAACCTCACCACCAACAAAGAGGACTTTTG...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AACACTGCTGAGTTCTGGAGCAGCCTCCAGCTTACTGGGGCAGTGAGGGACAAGGAAATGACCTCTTACTaGTGGCCCCACAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: NTAEFWSSLQLTGAVRDKEMTSY*WPHKSP
Trigger: AGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTC...CTTGTCCCTCACTGCCCCAGTAAGCTGGAGGCTGCTCCAGAACTCAGCAGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTAGTGAATGGTGGTTCTaGTTGCATATGGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPSEWWF*LHMVPV
Trigger: CACTGGCACCATATGCAACAAGAACCACCATTCACT...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGGCAGCTGGTTCCATGAACAAGGGACGAAGAGCTGTCCAAGGTGAGCTATCTCTGGAGGACAACACTTaGTGCCAAACGTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QAAGSMNKGRRAVQGELSLEDNT*CQTCLL
Trigger: AAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAG...AGATAGCTCACCTTGGACAGCTCTTCGTCCCTTGTTCATGGAACCAGCTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAATCAGTTCCCGTGTCTTaGCCTGCTCTTGGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLESVPVS*PALGPV
Trigger: GACTGGACCAAGAGCAGGCAAAGACACGGGAACTGA...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATCAGTTCCCGTGTCTTaGCCTGCTCTTGGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQSVPVS*PALGPV
Trigger: GACTGGACCAAGAGCAGGCAAAGACACGGGAACTGA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACGCAGATAAGAATGAATaGGGGTCCCAGACCCACCAT +
Preference number: 5 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDADKNE*GSQTHH
Trigger: ATGGTGGGTCTGGGACCCCAATTCATTCTTATCTGC...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS GCA 90 bp AGCAGCGCTCCTTTTTGCCACCGTGCTTGCTCAGGACGTAGTTGTTaGAGCAGTAGTAACAGAAGATGCGGCCACATATCCTGGGAACAA +
Preference number: 5 (lower is better)
Translates to: SSAPFCHRACSGRSC*SSSNRRCGHISWEQ
Trigger: TTGTTCCCAGGATATGTGGCCGCATCTTCTGTTACTACTGCTGCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438446.1
CDS CCA 90 bp CAGCAACCTACCATACCTTGCAAGTCTCGGATGATTCTCTGGAGCTaGCTCTCTGCATTGGTGGAGGCCATGGTGAGTTTGCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QQPTIPCKSRMILWS*LSALVEAMVSLPFL
Trigger: CAAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS-3UTR CAA 90 bp GTTTGGGGTCTCTGTTGGACTTGGCCTGGAGTCCCTGACCCATTCTCAAGCCCTTTCTGTCACAGCATCTaGCAAGTCTCGGATGATTCT +
Preference number: 5 (lower is better)
Translates to: VWGLCWTWPGVPDPFSSPFCHSI*QVSDDS
Trigger: AGAATCATCCGAGACTTGCAAGATGCTGTGACAGAA...AGGGCTTGAGAATGGGTCAGGGACTCCAGGCCAAGTCCAACAGAGACCCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTAGTCAGCTCATAGAGTaGGCCCACAATGTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGSQLIE*AHNVRA
Trigger: AGCTCGGACATTGTGGGCCAACTCTATGAGCTGACT...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATTGACCTCCTCGACCTaGGTTCTCTCCCTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQLTSST*VLSLSR
Trigger: CCTAGAAAGGGAGAGAACCAAGGTCGAGGAGGTCAA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTGCACTCTGCTGTCTGTaGACCTCCTCGACCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LQPPEAECLCITYIKQPFALCCL*TSSTLV
Trigger: AACCAAGGTCGAGGAGGTCAACAGACAGCAGAGTGC...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTTCTCCAGCTCCCTGTaGGCCTGCCGGAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTFSSSL*ACRSSS
Trigger: GGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGAA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCAGGGCTGCCCGCATCTaGGCCTGGAGGTCCACCACC +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGRAARI*AWRSTT
Trigger: GGTGGTGGACCTCCAGGCCAAGATGCGGGCAGCCCT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCGGTGCAGCTGCTCTaGCAGCTCAGCGTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFPVQLL*QLSVLQ
Trigger: CTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGG...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTCTTGAGGCTGCCTCTTaGGCGTCCTGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTLEAAS*ASWSSW
Trigger: CCAGGAGCTCCAGGACGCCAAAGAGGCAGCCTCAAG...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGGTCTGTATTTGCTCCTaGGCCTCCTGTGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWVCICS*ASCGLG
Trigger: CCCCAGGCCACAGGAGGCCAAGGAGCAAATACAGAC...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGTGTACACACAGCCATaGCAGGCCCCAAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEVYTQP*QAPSTV
Trigger: CACTGTACTTGGGGCCTGCAATGGCTGTGTGTACAC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGGTGAGCTATCTGTTGTaGGGGAAGAAAAGGACCACA +
Preference number: 5 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLVSYLL*GKKRTT
Trigger: TGTGGTCCTTTTCTTCCCCAACAACAGATAGCTCAC...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCGAAATGACCTCTTACTaGTGGCCCCACAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GASDTSEGHQLGQSLRSIEMTSY*WPHKSP
Trigger: AGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTC...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGCTCTGGGCAACCTCTTaGAAAGGTTCTATTCCCTGT +
Preference number: 5 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLLWATS*KGSIPC
Trigger: ACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAG...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGAGGGGAGTGGGGCCCAGGGATCCATCATGCCTCTGTTTACTCTGTTACTTTGAGTGAATGGTGGTTCTaGTTGCATATGGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GGEWGPGIHHASVYSVTLSEWWF*LHMVPV
Trigger: CACTGGCACCATATGCAACAAGAACCACCATTCACT...CAAAGTAACAGAGTAAACAGAGGCATGATGGATCCCTGGGCCCCACTCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAACTCTGTAGAGTCCACTaGGACCTGGAGGACAACACT +
Preference number: 5 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQLCRVH*DLEDNT
Trigger: AGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAG...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCTCTGTAGAGTCCACTaGGACCTGGAGGACAACACT +
Preference number: 5 (lower is better)
Translates to: TLAGIWALDVVYTQPLQALCRVH*DLEDNT
Trigger: AGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAG...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS GCA 90 bp CACAGCATCTTGCAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCTaGATTGGTGGAGGCCATGGTGAGTTTGCCTTTCTTGTCTGTATG +
Preference number: 5 (lower is better)
Translates to: HSILQVSDDSLELAL*IGGGHGEFAFLVCM
Trigger: CATACAGACAAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGATGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 90 bp ACAGCAAAAAGCCCTGCCACAAGTCCCTCAAAACCAAACTCAGCCTaGCCAGCAACCTACCATACCTTGCAAGTCTCGGATGATTCTCTG +
Preference number: 5 (lower is better)
Translates to: TAKSPATSPSKPNSA*PATYHTLQVSDDSL
Trigger: CAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTGCTGGGCAGGCTGAGTTTGGTTTTGAGGGACTTGTGGCAGGGCTTTTTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CCA 90 bp AGTTCTGTCACAGCATCTTGCAAGTCTCGGATGATTCTCTGGAGCTaGCTCTCTGCATTGGTGGAGGCCATGGTGAGTTTGCCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SSVTASCKSRMILWS*LSALVEAMVSLPFL
Trigger: CAAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGATGCTGTGACAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ATGTTGAGCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGCTCTGAGATAGACTaGACAAAGCGGATCCCATCA +
Preference number: 5 (lower is better)
Translates to: MLSLPNEAWVLLCSHQRQSSEID*TKRIPS
Trigger: TGATGGGATCCGCTTTGTCAAGTCTATCTCAGAGCT...CTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGCTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAACAGTCACTGGTCACTTaGGTGTTCATGAAGCACTGC +
Preference number: 5 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQQSLVT*VFMKHC
Trigger: GCAGTGCTTCATGAACACCAAAGTGACCAGTGACTG...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTTCCTCCTGGCAAATGTaGGCCAGGCAGCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: FLWATSLKGSIPCSPCLASSWQM*ARQHPS
Trigger: ACTTGGATGCTGCCTGGCCAACATTTGCCAGGAGGA...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTTCAGCTGTGTCTGTGTaGGCCCGGTGCAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTSAVSV*ARCSCS
Trigger: AGAGCAGCTGCACCGGGCCAACACAGACACAGCTGA...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CATCCAGCTCTCCTGGAGGAGTGGTTCTGGGTAAGCTGCAACCGGTCCTCTGCTACTCTTGGATTTTTGTaGTGGCTTTTTCGAGTTCCT +
Preference number: 5 (lower is better)
Translates to: HPALLEEWFWVSCNRSSATLGFL*WLFRVP
Trigger: AGGAACTCGAAAAAGCCACAACAAAAATCCAAGAGT...AGCAGAGGACCGGTTGCAGCTTACCCAGAACCACTCCTCCAGGAGAGCTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAATACTTCTTGGTTCTGTaGAGGTCATCCAGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQYFLVL*RSSRSA
Trigger: TGCTGACCTGGATGACCTCAACAGAACCAAGAAGTA...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACCTGTTCAGCCGCATTaGGGTCGAGAGAATCAGTTT +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLEPVQPH*GRENQF
Trigger: AAACTGATTCTCTCGACCCAAATGCGGCTGAACAGG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTAGCCCAGGGGCTGAGTaGATGATTTTGGAGCAGCTG +
Preference number: 5 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLSPGAE*MILEQL
Trigger: CAGCTGCTCCAAAATCATCAACTCAGCCCCTGGGCT...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCAAGCACTCTGTAGAGTCCACTTGGACCTGGAGGACAACACTTTGTGCCAATGGGTGTTTAAACCTTaGGCAGAGCATCCCTTTGGG +
Preference number: 5 (lower is better)
Translates to: GQALCRVHLDLEDNTLCQWVFKP*AEHPFG
Trigger: CCCAAAGGGATGCTCTGCCAAAGGTTTAAACACCCA...TTGGCACAAAGTGTTGTCCTCCAGGTCCAAGTGGACTCTACAGAGTGCTTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GCCTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTAGTGAAGGGCTTTATTaGAGGACAGAATCACCCAGA +
Preference number: 5 (lower is better)
Translates to: AFQMRLGYCSAATRGRVSSEGLY*RTESPR
Trigger: TCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCACT...AGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTGCCAGTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCAGTGAAGGGCTTTATTaGAGGACAGAATCACCCAGA +
Preference number: 5 (lower is better)
Translates to: GASDTSEGHQLGQSLRSISEGLY*RTESPR
Trigger: TCTGGGTGATTCTGTCCTCAAATAAAGCCCTTCACT...GATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCACTGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAACACACTGGCTGGCATTaGGGCATTAGATGTAGTGTA +
Preference number: 5 (lower is better)
Translates to: GHQLGQSLRSILGKPSTQHTGWH*GIRCSV
Trigger: TACACTACATCTAATGCCCAAATGCCAGCCAGTGTG...TTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACAGAAGGCCCCAATGTTaGAAAGTGGTTCTAATCCTG +
Preference number: 5 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDRRPQC*KVVLIL
Trigger: CAGGATTAGAACCACTTTCAAACATTGGGGCCTTCT...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCAAAAGTCCTCTTTGTaGGTGGTGAGGTTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGQKSSL*VVRLWL
Trigger: CAGCCACAACCTCACCACCAACAAAGAGGACTTTTG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAGTCTCCGCAGTATCCTaGGAAAGCCAAGCACTCAAA +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLEVSAVS*ESQALK
Trigger: TTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGAC...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp AGTCCACCTGGAATCCAGTGTGTTGAGGTCAAGCACTCTGTAGAGTCCACTTGGTCAGTGCTCAAGGTGTaGCACGCAAAACATCCAGCT +
Preference number: 5 (lower is better)
Translates to: SPPGIQCVEVKHSVESTWSVLKV*HAKHPA
Trigger: AGCTGGATGTTTTGCGTGCAACACCTTGAGCACTGA...CCAAGTGGACTCTACAGAGTGCTTGACCTCAACACACTGGATTCCAGGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS GCA 90 bp TACCATACCTTGCAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCTaGATTGGTGGAGGCCATGGTGAGTTTGCCTTTCTTGTCTGTATG +
Preference number: 5 (lower is better)
Translates to: YHTLQVSDDSLELAL*IGGGHGEFAFLVCM
Trigger: CATACAGACAAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CCA 90 bp GTTTCAGTGGGTGTTTCAGGCAAAGAGGAGCCGGACTCCTGTATCTaGCACAATTCCTCATCTGTGATGATATCAAACACAGCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: VSVGVSGKEEPDSCI*HNSSSVMISNTASS
Trigger: GGACGACGCTGTGTTTGATATCATCACAGATGAGGAATTGTGCCAGATACAGGAGTCCGGCTCCTCTTTGCCTGAAACACCCACTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTGCAGAAAGGGGCTTCTaGCATAGTACCAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: QPPEAECLCITYIKQPFSAERGF*HSTSHW
Trigger: CCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTGC...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTAGTCAGCTCATAGAGTaGGCCCACAATGTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: FLWATSLKGSIPCSPCLASQLIE*AHNVRA
Trigger: AGCTCGGACATTGTGGGCCAACTCTATGAGCTGACT...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTGTTGGACACCATCTCTaGAGTCTGCAGGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAVGHHL*SLQVAA
Trigger: AGCAGCTACCTGCAGACTCAAGAGATGGTGTCCAAC...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTGCAGGGCTTGCAGCTaGCCCTCCAGGAGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: TTCSSGSSIAICISLKYPCRACS*PSRSWL
Trigger: TAACCAGCTCCTGGAGGGCAAGCTGCAAGCCCTGCA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTACCGGGCTTCTGCCAGTaGCTGGCACTGCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: LNMPRCFVAAESTANLSLPGFCQ*LALLHL
Trigger: GAGGTGGAGCAGTGCCAGCAACTGGCAGAAGCCCGG...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCTTGAGGCTGCCTCTTaGGCGTCCTGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGLEAAS*ASWSSW
Trigger: CCAGGAGCTCCAGGACGCCAAAGAGGCAGCCTCAAG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAACCTGTTCAGCCGCATTaGGGTCGAGAGAATCAGTTT +
Preference number: 5 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEPVQPH*GRENQF
Trigger: AAACTGATTCTCTCGACCCAAATGCGGCTGAACAGG...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAACACACTGGCTGGCATTaGGGCATTAGATGTAGTGTA +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLEHTGWH*GIRCSV
Trigger: TACACTACATCTAATGCCCAAATGCCAGCCAGTGTG...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTGGGCAAATGGGCTGTaGGGGAACCTGTCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TTCSSGSSIAICISLKYPWANGL*GNLSGG
Trigger: CCCTCCTGACAGGTTCCCCAACAGCCCATTTGCCCA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATGGTTTGGGGTCTCTGTaGGACTTGGCCTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYGLGSL*DLAWSP
Trigger: GGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACC...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGCCAAGCACTCAAAGATTCGAAATGACCTCTTACTaGTGGCCCCACAAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: QLGQSLRSILGKPSTQRFEMTSY*WPHKSP
Trigger: AGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTC...GAATCTTTGAGTGCTTGGCTTTCCAAGGATACTGCGGAGACTCTGGCCAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTCAGATGGAATGTCCCAGGCCCCAAACCCATTAGCTACTCAGTGAATGGTGGTCTCTGGGCAACCTCTTaGAAAGGTTCTATTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LRWNVPGPKPISYSVNGGLWATS*KGSIPC
Trigger: ACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAG...ACCACCATTCACTGAGTAGCTAATGGGTTTGGGGCCTGGGACATTCCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTTCCAAATGAGGCTTGGGTATTGCTCTGCAGCCACCAGAGGCAGAGTGTCTCTGAGAGCACAGCAAACTaGAGCTTAAACAGCAACCTA +
Preference number: 5 (lower is better)
Translates to: LPNEAWVLLCSHQRQSVSESTAN*SLNSNL
Trigger: TAGGTTGCTGTTTAAGCTCAAGTTTGCTGTGCTCTC...AGAGACACTCTGCCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATTTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAATGAGGCTTGGGTATaGCTCTGCAGCCACCAGAGG +
Preference number: 5 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWNEAWV*LCSHQR
Trigger: CCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS TCA 90 bp TTATGCAAGCTGGTGCTGTCATCCGTGATGGGTTCCCCTGCTTCCTaGAATTCTTTGCTTAGTTCTGTCACAGCATCTTGCAAGTCTCGG +
Preference number: 5 (lower is better)
Translates to: LCKLVLSSVMGSPAS*NSLLSSVTASCKSR
Trigger: CCGAGACTTGCAAGATGCTGTGACAGAACTAAGCAAAGAATTTCAGGAAGCAGGGGAACCCATCACGGATGACAGCACCAGCTTGCATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTCAGTCACTGGTCACTTaGGTGTTCATGAAGCACTGC +
Preference number: 5 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAQSLVT*VFMKHC
Trigger: GCAGTGCTTCATGAACACCAAAGTGACCAGTGACTG...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGGCAGAAAGGGGCTTCTaGCATAGTACCAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWAERGF*HSTSHW
Trigger: CCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTGC...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCACCCTCCAATGCCTCGTaGTTTAGGGGGCTGTTCAGG +
Preference number: 5 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSPSNAS*FRGLFR
Trigger: CCTGAACAGCCCCCTAAACAACGAGGCATTGGAGGG...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCCTCTCTGTCTGCAGTaGCTCCCCTTGCTGGCTGAC +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGPLCLQ*LPLLAD
Trigger: GTCAGCCAGCAAGGGGAGCAACTGCAGACAGAGAGG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTGCAGGGCTTGCAGCTaGCCCTCCAGGAGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGCRACS*PSRSWL
Trigger: TAACCAGCTCCTGGAGGGCAAGCTGCAAGCCCTGCA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTTCACGCTCCGAGCATaGCAGCAGCTCCTGGACATG +
Preference number: 5 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFFTLRA*QQLLDM
Trigger: CATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATCTCTCCCATGTCTGCTaGGGTGGCCTTCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYLSHVC*GGLQLL
Trigger: GAGAAGCTGAAGGCCACCCAAGCAGACATGGGAGAG...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGGGACCTTTTGTCAGATGCTCTGTTCACCCATGGAAGAACCTGGGGCCTGACACTCTTGGATTTTTGTaGTGGCTTTTTCGAGTTCCT +
Preference number: 5 (lower is better)
Translates to: LGPFVRCSVHPWKNLGPDTLGFL*WLFRVP
Trigger: AGGAACTCGAAAAAGCCACAACAAAAATCCAAGAGT...GTCAGGCCCCAGGTTCTTCCATGGGTGAACAGAGCATCTGACAAAAGGTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTCATTCCTCTCACGATTaGTCACCTCCTGGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAHSSHD*SPPGRV
Trigger: AACTCTGCCAGGAGGTGACAAATCGTGAGAGGAATG...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCAGTCGAGGCAGTGGTTaGCCTCTGTGTCTCCGAGCC +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGSRGSG*PLCLRA
Trigger: GGCTCGGAGACACAGAGGCAAACCACTGCCTCGACT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp CCTGGAGGACAACACTTTGTGCCAAACGTGCCTCCTTGTTTGTGGGTAAGTGAAGTGAGCTATCTGTTGTaGGGGAAGAAAAGGACCACA +
Preference number: 5 (lower is better)
Translates to: PGGQHFVPNVPPCLWVSEVSYLL*GKKRTT
Trigger: TGTGGTCCTTTTCTTCCCCAACAACAGATAGCTCAC...TTCACTTACCCACAAACAAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCGGTTTGGGGTCTCTGTaGGACTTGGCCTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGGLGSL*DLAWSP
Trigger: GGGACTCCAGGCCAAGTCCAACAGAGACCCCAAACC...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTTCTCAAAAGTCCTCTTTGTaGGTGGTGAGGTTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: QPPEAECLCITYIKQPFSQKSSL*VVRLWL
Trigger: CAGCCACAACCTCACCACCAACAAAGAGGACTTTTG...AGAAAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp CTGCAGCCACCAGAGGCAGAGTGTCTCTGCATAACATACATCAAGCAGCCTTTTCTCTGGGCAACCTCTTaGAAAGGTTCTATTCCCTGT +
Preference number: 5 (lower is better)
Translates to: LQPPEAECLCITYIKQPFLWATS*KGSIPC
Trigger: ACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAG...AAAAGGCTGCTTGATGTATGTTATGCAGAGACACTCTGCCTCTGGTGGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTTCAGTGCTCAAGGTGTaGCACGCAAAACATCCAGCT +
Preference number: 5 (lower is better)
Translates to: FLWATSLKGSIPCSPCLASVLKV*HAKHPA
Trigger: AGCTGGATGTTTTGCGTGCAACACCTTGAGCACTGA...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS CCA 90 bp TACTTCTTGGTTCTGTTGAGGTCATCCAGGTCAGCAAGCATCTTCTaGTCATTCCTCTCACGATTTGTCACCTCCTGGCAGAGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: YFLVLLRSSRSASIF*SFLSRFVTSWQSLL
Trigger: CAACAAACTCTGCCAGGAGGTGACAAATCGTGAGAGGAATGACCAGAAGATGCTTGCTGACCTGGATGACCTCAACAGAACCAAGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACTTCTCCAGCTCCCTGTaGGCCTGCCGGAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FIKATLKYAKMFCSCREHFSSSL*ACRSSS
Trigger: GGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGAA...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCTCTCCCATGTCTGCTaGGGTGGCCTTCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGLSHVC*GGLQLL
Trigger: GAGAAGCTGAAGGCCACCCAAGCAGACATGGGAGAG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATTTCTCCTTGTGGGAGTaGCATCGGGTCGTGGGAATG +
Preference number: 5 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYFSLWE*HRVVGM
Trigger: CATTCCCACGACCCGATGCAACTCCCACAAGGAGAA...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCTGGCAGAGCATCCCTTaGGGTGTGACAACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: TTCSSGSSIAICISLKYPWQSIP*GVTTAE
Trigger: CTCAGCTGTTGTCACACCCAAAGGGATGCTCTGCCA...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAACACACTGGCTGGCATTaGGGCATTAGATGTAGTGTA +
Preference number: 5 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEHTGWH*GIRCSV
Trigger: TACACTACATCTAATGCCCAAATGCCAGCCAGTGTG...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp ACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTCCTTTCATTTGGGCCTGAAGTGAGCTATCTGTTGTaGGGGAAGAAAAGGACCACA +
Preference number: 5 (lower is better)
Translates to: TGSVISSPTGDFLSFGPEVSYLL*GKKRTT
Trigger: TGTGGTCCTTTTCTTCCCCAACAACAGATAGCTCAC...TTCAGGCCCAAATGAAAGGAAATCGCCAGTTGGGGATGAAATCACAGAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGGTAAGTGAATCTGACAGAGGTTGGCATGTTCTTGAAGGTGGTGAGTGGCTTAAGGTGAGCTATCTGTaGTTGGGGAAGAAAAGGACC +
Preference number: 5 (lower is better)
Translates to: WVSESDRGWHVLEGGEWLKVSYL*LGKKRT
Trigger: GGTCCTTTTCTTCCCCAACAACAGATAGCTCACCTT...AAGCCACTCACCACCTTCAAGAACATGCCAACCTCTGTCAGATTCACTTACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTCTCTGGGCAACCTCTTTGAAAGGTTCTATTCCCTGTTCCCCATGCCTTGCTGAATGGTGGTTCTTGTaGCATATGGTGCCAGTGACA +
Preference number: 5 (lower is better)
Translates to: FLWATSLKGSIPCSPCLAEWWFL*HMVPVT
Trigger: TGTCACTGGCACCATATGCAACAAGAACCACCATTC...AGCAAGGCATGGGGAACAGGGAATAGAACCTTTCAAAGAGGTTGCCCAGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTTCAGTTCCCGTGTCTTaGCCTGCTCTTGGTCCAGTC +
Preference number: 5 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFSVPVS*PALGPV
Trigger: GACTGGACCAAGAGCAGGCAAAGACACGGGAACTGA...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp ATTCCCAACACCTCTGAGCCAAGGACAGTTTCTTGGCCTAAAGAATTCTCATATAATGAGGCTTGGGTATaGCTCTGCAGCCACCAGAGG +
Preference number: 5 (lower is better)
Translates to: IPNTSEPRTVSWPKEFSYNEAWV*LCSHQR
Trigger: CCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATT...ATATGAGAATTCTTTAGGCCAAGAAACTGTCCTTGGCTCAGAGGTGTTGGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCCCAAGTCTCAAAGATTCTAGATaGCTCTGGGTTCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: AGIWALDVVYTQPLQAPSLKDSR*LWVLFC
Trigger: ACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGAG...ACTTGGGGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS CCA 90 bp AGGCACAGAAGTAATCCCAGTAGTCCTTCTTGTTGCCCAGGAGGGTaGCCTTCTCTTTCTGATCAAATTGCAGGAGATACTCAAGTTTAT +
Preference number: 5 (lower is better)
Translates to: RHRSNPSSPSCCPGG*PSLSDQIAGDTQVY
Trigger: ATAAACTTGAGTATCTCCTGCAATTTGATCAGAAAGAGAAGGCCACCCTCCTGGGCAACAAGAAGGACTACTGGGATTACTTCTGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCTTGACCTCCTCGACCTaGGTTCTCTCCCTTTCTAGG +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGLTSST*VLSLSR
Trigger: CCTAGAAAGGGAGAGAACCAAGGTCGAGGAGGTCAA...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCATTCCAGAAATGACCTCTTACTTGTGGCCCCACAAAAGTCCTCTTTGTTGGAGAAGGCCCCAATGTTaGAAAGTGGTTCTAATCCTG +
Preference number: 5 (lower is better)
Translates to: SIPEMTSYLWPHKSPLCWRRPQC*KVVLIL
Trigger: CAGGATTAGAACCACTTTCAAACATTGGGGCCTTCT...CCAACAAAGAGGACTTTTGTGGGGCCACAAGTAAGAGGTCATTTCTGGAATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp ACACTGGCTGGCATTTGGGCATTAGATGTAGTGTACACACAGCCATTGCAGGCCAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGT +
Preference number: 5 (lower is better)
Translates to: TLAGIWALDVVYTQPLQASYQRL*LRRPQC
Trigger: ACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACT...GGCCTGCAATGGCTGTGTGTACACTACATCTAATGCCCAAATGCCAGCCAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GTGACACTTCAGAAGGTCATCAGCTTGGCCAGAGTCTCCGCAGTATCCTTGGAAAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGT +
Preference number: 5 (lower is better)
Translates to: VTLQKVISLARVSAVSLESYQRL*LRRPQC
Trigger: ACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACT...TTCCAAGGATACTGCGGAGACTCTGGCCAAGCTGATGACCTTCTGAAGTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGCAGATAAGAATGAATaGGGGTCCCAGACCCACCAT +
Preference number: 5 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSADKNE*GSQTHH
Trigger: ATGGTGGGTCTGGGACCCCAATTCATTCTTATCTGC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS CCA 90 bp TCACCTCCTGGCAGAGTTTGTTGTAATACTCTTGGATTTTTGTTGTaGCTTTTTCGAGTTCCTTCTGGGTCCTTTCTAGGTCTTCACGCA +
Preference number: 5 (lower is better)
Translates to: SPPGRVCCNTLGFLL*LFRVPSGSFLGLHA
Trigger: TGCGTGAAGACCTAGAAAGGACCCAGAAGGAACTCGAAAAAGCCACAACAAAAATCCAAGAGTATTACAACAAACTCTGCCAGGAGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAGAGGCCATGGTGAGTTaGCCTTTCTTGTCTGTATGT +
Preference number: 5 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSEAMVS*PFLSVC
Trigger: ACATACAGACAAGAAAGGCAAACTCACCATGGCCTC...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACGTTCTTGCCGGCCCTTaGTGTCTGATGCCGTATCTG +
Preference number: 5 (lower is better)
Translates to: FIKATLKYAKMFCSCREHVLAGP*CLMPYL
Trigger: CAGATACGGCATCAGACACAAAGGGCCGGCAAGAAC...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp GGCATCTGGTATCGATATGAAGACGTAACTGTTATTCAGAGAGATGAGCCATCAAGTGAATGGTGGTTCTaGTTGCATATGGTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: GIWYRYEDVTVIQRDEPSSEWWF*LHMVPV
Trigger: CACTGGCACCATATGCAACAAGAACCACCATTCACT...TGATGGCTCATCTCTCTGAATAACAGTTACGTCTTCATATCGATACCAGATGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAATGAGGCTTGGGTATaGCTCTGCAGCCACCAGAGG +
Preference number: 5 (lower is better)
Translates to: FIKATLKYAKMFCSCREHNEAWV*LCSHQR
Trigger: CCTCTGGTGGCTGCAGAGCAATACCCAAGCCTCATT...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTACCTGTTCAGCCGCATTaGGGTCGAGAGAATCAGTTT +
Preference number: 5 (lower is better)
Translates to: LNMPRCFVAAESTANLSLPVQPH*GRENQF
Trigger: AAACTGATTCTCTCGACCCAAATGCGGCTGAACAGG...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TTTATAAAAGCCACTCTTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACCTGGAGGACAACACTTaGTGCCAAACGTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: FIKATLKYAKMFCSCREHLEDNT*CQTCLL
Trigger: AAGGAGGCACGTTTGGCACAAAGTGTTGTCCTCCAG...GTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAAGAGTGGCTTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCAGAAGGCCCCAATGTTaGAAAGTGGTTCTAATCCTG +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGRRPQC*KVVLIL
Trigger: CAGGATTAGAACCACTTTCAAACATTGGGGCCTTCT...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TGGCTTCAGTGGCATGATGAAGAAGGCATCTGGTATCGATATGAAGACGTAACTCTCAAAGATTCTAGATaGCTCTGGGTTCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: WLQWHDEEGIWYRYEDVTLKDSR*LWVLFC
Trigger: ACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGAG...AGTTACGTCTTCATATCGATACCAGATGCCTTCTTCATCATGCCACTGAAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TTAAATATGCCAAGATGTTTTGTAGCTGCAGAGAGCACAGCAAACTTGAGCTTAGAGAGCACAGCAAACTaGAGCTTAAACAGCAACCTA +
Preference number: 5 (lower is better)
Translates to: LNMPRCFVAAESTANLSLESTAN*SLNSNL
Trigger: TAGGTTGCTGTTTAAGCTCAAGTTTGCTGTGCTCTC...TAAGCTCAAGTTTGCTGTGCTCTCTGCAGCTACAAAACATCTTGGCATATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp ACCACCTGCAGCAGTGGTTCTTCAATTGCTATTTGCATTTCTTTAAAGTACCCCCTCTTTCTGATCAAATaGCAGGAGATACTCAAGTTT +
Preference number: 5 (lower is better)
Translates to: TTCSSGSSIAICISLKYPLFLIK*QEILKF
Trigger: AAACTTGAGTATCTCCTGCAATTTGATCAGAAAGAG...GGGGTACTTTAAAGAAATGCAAATAGCAATTGAAGAACCACTGCTGCAGGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS-3UTR CAA 90 bp TCCAACCATATCATAAAACACAGGCTCTGTGATTTCATCCCCAACTGGCGATTTAGTTATCAAAGACTTTaGTTAAGAAGGCCCCAATGT +
Preference number: 5 (lower is better)
Translates to: SNHIIKHRLCDFIPNWRFSYQRL*LRRPQC
Trigger: ACATTGGGGCCTTCTTAACAAAAGTCTTTGATAACT...AAATCGCCAGTTGGGGATGAAATCACAGAGCCTGTGTTTTATGATATGGTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS-3UTR CAA 90 bp TCAAAGACTTTTGTTAAGAAGGCCCCAATGTTTGAAAGTGGTTCTAATCCTGGCCTCAAAGATTCTAGATaGCTCTGGGTTCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: SKTFVKKAPMFESGSNPGLKDSR*LWVLFC
Trigger: ACAAAAGAGAACCCAGAGCAATCTAGAATCTTTGAG...GCCAGGATTAGAACCACTTTCAAACATTGGGGCCTTCTTAACAAAAGTCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000535325.5
CDS GCA 72 bp GCAAGCTCGCCTCCATCTGGTCACCCAAGTGCCGGATaGTGGCCTGCTCGGCCTCCAGGGAGGCCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: ASSPPSGHPSAG*WPARPPGRPRS
Trigger: GCTCCTTGGCCTCCCTGGAGGCCGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGATGGAGGCGAGCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp AGCTCGCCTCCATCTGGTCACCCAAGTGCCGGATGCTaGCCTGCTCGGCCTCCAGGGAGGCCAAGGAGCCCT +
Preference number: 6 (lower is better)
Translates to: SSPPSGHPSAGC*PARPPGRPRSP
Trigger: AGGGCTCCTTGGCCTCCCTGGAGGCCGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGATGGAGGCGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp GCTACTTGGCGCTCCAGGCCCTCTCGCTCCCTTGAGGCTGCCTCTTaGGCGTCCTGGAGCTCCTGGACAGCACAGGCCAGTGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ATWRSRPSRSLEAAS*ASWSSWTAQASASS
Trigger: GGAGGAGGCACTGGCCTGTGCTGTCCAGGAGCTCCAGGACGCCAAAGAGGCAGCCTCAAGGGAGCGAGAGGGCCTGGAGCGCCAAGTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp CCCAGCTACTTGGCGCTCCAGGCCCTCTCGCTCCCTTaGGGCTGCCTCTTTGGCGTCCTGGAGCTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: PSYLALQALSLP*GCLFGVLELLD
Trigger: GTCCAGGAGCTCCAGGACGCCAAAGAGGCAGCCTCAAGGGAGCGAGAGGGCCTGGAGCGCCAAGTAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GCTGCAGTGCGCCCCCTCTCCCTCTCTGTCTGCAGTTaGTCCCCTTGCTGGCTGACAGCTGCCCTCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AAVRPLSLSVCS*SPCWLTAALSS
Trigger: GGAGCTGAGGGCAGCTGTCAGCCAGCAAGGGGAGCAACTGCAGACAGAGAGGGAGAGGGGGCGCACTGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp CCTCTGCTGGGCCTCATCGGCCCTCTCCTCCTGCAGTaGCCCTTCACGCTCCGAGCATTGCAGCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: PLLGLIGPLLLQ*PFTLRALQQLL
Trigger: CAGGAGCTGCTGCAATGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAGGGCCGATGAGGCCCAGCAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CACAGGGACCAGGGCCTCATTCTTCTCACCTGCCACTaGCAGTTCTGGGCCAGGCGGCCCAGCAAGCCGCTC +
Preference number: 6 (lower is better)
Translates to: HRDQGLILLTCH*QFWARRPSKPL
Trigger: GAGCGGCTTGCTGGGCCGCCTGGCCCAGAACTGCCAGTGGCAGGTGAGAAGAATGAGGCCCTGGTCCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CTCAACTCTGCTAGCTCCTCCTCCCAGGAGCTCGTGTaGGCCAGCAACTCCTGCAGCCGTCGCCAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LNSASSSSQELV*ASNSCSRRQSW
Trigger: CCAGCTCTGGCGACGGCTGCAGGAGTTGCTGGCCCACACGAGCTCCTGGGAGGAGGAGCTAGCAGAGTTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp GGTGAGGCTGGTGACAGTGCAGGGCTGGGCTCTCCCTaGCTAGTGCCTGAGCCACTGCTATCAGGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: GEAGDSAGLGSP*LVPEPLLSGEP
Trigger: TGGCTCCCCTGATAGCAGTGGCTCAGGCACTAGCCAGGGAGAGCCCAGCCCTGCACTGTCACCAGCCTCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CAA 90 bp TGCTCCCTCAGGACGGCCTCAGCCATGCTTAGCTGGCTCTGCACCTaGTCCTGGTCATCCAGGGCTGCCCGCATCTTGGCCTGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: CSLRTASAMLSWLCT*SWSSRAARILAWRS
Trigger: GGACCTCCAGGCCAAGATGCGGGCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TGTTGGCTCACCTGTGCCAGCTGGGTCTCCAGGAACTaGAGCTGCCGGGTCAGAGACCTGACCTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: CWLTCASWVSRN*SCRVRDLTSCS
Trigger: GGAGCAGGAGGTCAGGTCTCTGACCCGGCAGCTGCAGTTCCTGGAGACCCAGCTGGCACAGGTGAGCCAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TGCTGGCACTGGCTCTCGAGAGCCCTAAGCTCTCTGTaGCGGGCTTCTGCCAGTTGCTGGCACTGCTCCACC +
Preference number: 6 (lower is better)
Translates to: CWHWLSRALSSL*RASASCWHCST
Trigger: GGTGGAGCAGTGCCAGCAACTGGCAGAAGCCCGGCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TCCCTCAGGACGGCCTCAGCCATGCTTAGCTGGCTCTaGACCTTGTCCTGGTCATCCAGGGCTGCCCGCATC +
Preference number: 6 (lower is better)
Translates to: SLRTASAMLSWL*TLSWSSRAARI
Trigger: GATGCGGGCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GTGTTGGCCCGGTGCAGCTGCTCTTGCAGCTCAGCGTaGTCCAGCTGTGCTTCCTCGGAGCTGCATTTGGCC +
Preference number: 6 (lower is better)
Translates to: VLARCSCSCSSA*SSCASSELHLA
Trigger: GGCCAAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CAGAATTTCGGCCCTCGGTGGCTGTCTGCTCAGCAGTaGTCAGACTCCATGGTGGCACGCGCTCGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: QNFGPRWLSAQQ*SDSMVARARGS
Trigger: GGACCCACGAGCGCGTGCCACCATGGAGTCTGACCACTGCTGAGCAGACAGCCACCGAGGGCCGAAATTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS CCA 72 bp TTGGCCTTCCTTACAGCCAGCAAGCTCGCCTCCATCTaGTCACCCAAGTGCCGGATGCTGGCCTGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: LAFLTASKLASI*SPKCRMLACSA
Trigger: GGCCGAGCAGGCCAGCATCCGGCACTTGGGTGACCAGATGGAGGCGAGCTTGCTGGCTGTAAGGAAGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp GCCTCAGCCATGCTTAGCTGGCTCTGCACCTTGTCCTaGTCATCCAGGGCTGCCCGCATCTTGGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: ASAMLSWLCTLS*SSRAARILAWR
Trigger: CCTCCAGGCCAAGATGCGGGCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp AGGACGGCCTCAGCCATGCTTAGCTGGCTCTGCACCTaGTCCTGGTCATCCAGGGCTGCCCGCATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RTASAMLSWLCT*SWSSRAARILA
Trigger: GGCCAAGATGCGGGCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp GCGCAAACCTGGATGCCCAGCTCAGCTGTGTCTGTGTaGGCCCGGTGCAGCTGCTCTTGCAGCTCAGCGTGC +
Preference number: 6 (lower is better)
Translates to: AQTWMPSSAVSV*ARCSCSCSSAC
Trigger: GCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGACACAGCTGAGCTGGGCATCCAGGTTTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp AGGCGCTCCAGGCTGGCCCGGGCATCCTCTTTCAGCTaGAGCTCCTTGACCAGCTGTTCCAGTTGGGCACTC +
Preference number: 6 (lower is better)
Translates to: RRSRLARASSFS*SSLTSCSSWAL
Trigger: GAGTGCCCAACTGGAACAGCTGGTCAAGGAGCTTCAGCTGAAAGAGGATGCCCGGGCCAGCCTGGAGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GAGGAAGGCTCAGAATTTCGGCCCTCGGTGGCTGTCTaGTCAGCAGTGGTCAGACTCCATGGTGGCACGCGC +
Preference number: 6 (lower is better)
Translates to: EEGSEFRPSVAV*SAVVRLHGGTR
Trigger: GCGCGTGCCACCATGGAGTCTGACCACTGCTGAGCAGACAGCCACCGAGGGCCGAAATTCTGAGCCTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS GCA 72 bp CCACCTCCTCCCGCAGCTGCTGACACTCGCCCTCCTTaGTCTGTAGAATGGCCTCCTTCTCTGCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: PPPPAAADTRPP*SVEWPPSLPSG
Trigger: CCCAGATGGCAGAGAAGGAGGCCATTCTACAGAGCAAGGAGGGCGAGTGTCAGCAGCTGCGGGAGGAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GTGCAGCTGCTCTTGCAGCTCAGCGTGCTCCAGCTGTaGTTCCTCGGAGCTGCATTTGGCCTGGGACAGCTC +
Preference number: 6 (lower is better)
Translates to: VQLLLQLSVLQL*FLGAAFGLGQL
Trigger: GAGCTGTCCCAGGCCAAATGCAGCTCCGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TCAGCTGTGTCTGTGTTGGCCCGGTGCAGCTGCTCTTaGAGCTCAGCGTGCTCCAGCTGTGCTTCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: SAVSVLARCSCS*SSACSSCASSE
Trigger: CTCCGAGGAAGCACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGACACAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TGGATGCCCAGCTCAGCTGTGTCTGTGTTGGCCCGGTaGAGCTGCTCTTGCAGCTCAGCGTGCTCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: WMPSSAVSVLAR*SCSCSSACSSC
Trigger: ACAGCTGGAGCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGACACAGCTGAGCTGGGCATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GGGGTCAGAGGAGAAGACCCAGCTGATGGTGAGGCCTaGCTCGGCCACAGTGATGGGGATCAGGCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: GVRGEDPADGEA*LGHSDGDQAVG
Trigger: ACCTACAGCCTGATCCCCATCACTGTGGCCGAGGCAGGCCTCACCATCAGCTGGGTCTTCTCCTCTGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CCA 72 bp GCCGGAGCTCTTCCTCCTGGCTGCCCTCTTGCACCTTaGTATCGTCTAACTGTGCCTCCTGCAGGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: AGALPPGCPLAP*YRLTVPPAGPS
Trigger: AGAGGGGCCTGCAGGAGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp TCGGCCTGCAGGGCTTGCAGCTTGCCCTCCAGGAGCTaGTTACGCCCGACCACATTCTGTAGCTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SACRACSLPSRS*LRPTTFCSSFS
Trigger: GGAGAAGGAGCTACAGAATGTGGTCGGGCGTAACCAGCTCCTGGAGGGCAAGCTGCAAGCCCTGCAGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp TTGTGCTCCCTCAGGACGGCCTCAGCCATGCTTAGCTaGCTCTGCACCTTGTCCTGGTCATCCAGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LCSLRTASAMLS*LCTLSWSSRAA
Trigger: GGCAGCCCTGGATGACCAGGACAAGGTGCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGAGCACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CGCAAACCTGGATGCCCAGCTCAGCTGTGTCTGTGTTaGCCCGGTGCAGCTGCTCTTGCAGCTCAGCGTGCT +
Preference number: 6 (lower is better)
Translates to: RKPGCPAQLCLC*PGAAALAAQRA
Trigger: AGCACGCTGAGCTGCAAGAGCAGCTGCACCGGGCCAACACAGACACAGCTGAGCTGGGCATCCAGGTTTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp TGCCGGAGCTCTTCCTCCTGGCTGCCCTCTTGCACCTaGGTATCGTCTAACTGTGCCTCCTGCAGGCCCCTC +
Preference number: 6 (lower is better)
Translates to: CRSSSSWLPSCT*VSSNCASCRPL
Trigger: GAGGGGCCTGCAGGAGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp GACAGGGCTAGCTGGGCAGCCAGCTCACGGGCTTCATaGTCAGTGGGTGGGCCAACTCCCTGTTGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: DRASWAASSRAS*SVGGPTPCWPF
Trigger: GAAAGGCCAACAGGGAGTTGGCCCACCCACTGACAATGAAGCCCGTGAGCTGGCTGCCCAGCTAGCCCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp CCTCTCCTCCTGCAGTGCCCCTTCACGCTCCGAGCATaGCAGCAGCTCCTGGACATGGGCTCTGTTAAGGGC +
Preference number: 6 (lower is better)
Translates to: PLLLQCPFTLRA*QQLLDMGSVKG
Trigger: GCCCTTAACAGAGCCCATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp GTCCTTTCTAGGTCTTCACGCAGGGCAGCCCCCTCCTaGTCCTTCCTCAGCATGGCCGCCTGGCACTCTGCA +
Preference number: 6 (lower is better)
Translates to: VLSRSSRRAAPS*SFLSMAAWHSA
Trigger: TGCAGAGTGCCAGGCGGCCATGCTGAGGAAGGACAAGGAGGGGGCTGCCCTGCGTGAAGACCTAGAAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp CCAGCGGTGTGTCCTCGGCCTCCTGGAAGACCACACTaGAGGAGATGCTCTTGGGGTCAGAGGAGAAGACCC +
Preference number: 6 (lower is better)
Translates to: PAVCPRPPGRPH*RRCSWGQRRRP
Trigger: GGGTCTTCTCCTCTGACCCCAAGAGCATCTCCTTCAGTGTGGTCTTCCAGGAGGCCGAGGACACACCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS GCA 72 bp TTGGCCTGCCGGAGCTCTTCCTCCTGGCTGCCCTCTTaGACCTTGGTATCGTCTAACTGTGCCTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LACRSSSSWLPS*TLVSSNCASCR
Trigger: CCTGCAGGAGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GCTCCCTGTTGGCCTGCCGGAGCTCTTCCTCCTGGCTaGCCTCTTGCACCTTGGTATCGTCTAACTGTGCCT +
Preference number: 6 (lower is better)
Translates to: APCWPAGALPPG*PLAPWYRLTVP
Trigger: AGGCACAGTTAGACGATACCAAGGTGCAAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp CTCTCCTCCTGCAGTGCCCCTTCACGCTCCGAGCATTaGAGCAGCTCCTGGACATGGGCTCTGTTAAGGGCT +
Preference number: 6 (lower is better)
Translates to: LSSCSAPSRSEH*SSSWTWALLRA
Trigger: AGCCCTTAACAGAGCCCATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp TCCAGGTCACTCACATGTTGGCTCACCTGTGCCAGCTaGGTCTCCAGGAACTGCAGCTGCCGGGTCAGAGAC +
Preference number: 6 (lower is better)
Translates to: SRSLTCWLTCAS*VSRNCSCRVRD
Trigger: GTCTCTGACCCGGCAGCTGCAGTTCCTGGAGACCCAGCTGGCACAGGTGAGCCAACATGTGAGTGACCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CGACCACATTCTGTAGCTCCTTCTCCAGCTCCCTGTTaGCCTGCCGGAGCTCTTCCTCCTGGCTGCCCTCTT +
Preference number: 6 (lower is better)
Translates to: RPHSVAPSPAPC*PAGALPPGCPL
Trigger: AAGAGGGCAGCCAGGAGGAAGAGCTCCGGCAGGCCAACAGGGAGCTGGAGAAGGAGCTACAGAATGTGGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp TCCACTCGCTCCTTTTCCACGGTCAGTGCGCAAACCTaGATGCCCAGCTCAGCTGTGTCTGTGTTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: STRSFSTVSAQT*MPSSAVSVLAR
Trigger: CCGGGCCAACACAGACACAGCTGAGCTGGGCATCCAGGTTTGCGCACTGACCGTGGAAAAGGAGCGAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp CTCATCGGCCCTCTCCTCCTGCAGTGCCCCTTCACGCTCCGAGCATaGCAGCAGCTCCTGGACATGGGCTCTGTTAAGGGCTTCATTCTG +
Preference number: 6 (lower is better)
Translates to: LIGPLLLQCPFTLRA*QQLLDMGSVKGFIL
Trigger: CAGAATGAAGCCCTTAACAGAGCCCATGTCCAGGAGCTGCTGCAATGCTCGGAGCGTGAAGGGGCACTGCAGGAGGAGAGGGCCGATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp TCCTTCTGGGTCCTTTCTAGGTCTTCACGCAGGGCAGCCCCCTCCTaGTCCTTCCTCAGCATGGCCGCCTGGCACTCTGCAAGATGGTTG +
Preference number: 6 (lower is better)
Translates to: SFWVLSRSSRRAAPS*SFLSMAAWHSARWL
Trigger: CAACCATCTTGCAGAGTGCCAGGCGGCCATGCTGAGGAAGGACAAGGAGGGGGCTGCCCTGCGTGAAGACCTAGAAAGGACCCAGAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp CACATATCCTGCAGTGGTGCCGCCGCACCATCCAGCTaGACTCCCGCTTACAGTCGAGGCAGTGGTTTGCCT +
Preference number: 6 (lower is better)
Translates to: HISCSGAAAPSS*TPAYSRGSGLP
Trigger: AGGCAAACCACTGCCTCGACTGTAAGCGGGAGTTCAGCTGGATGGTGCGGCGGCACCACTGCAGGATATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TTCTCTCTGTCCAGCTGCTGCATGCGCTCCCGTAGCTaGTTCTCCCGCACCTCCAACTGGTCCAGCTCTAGT +
Preference number: 6 (lower is better)
Translates to: FSLSSCCMRSRS*FSRTSNWSSSS
Trigger: ACTAGAGCTGGACCAGTTGGAGGTGCGGGAGAAGCAGCTACGGGAGCGCATGCAGCAGCTGGACAGAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TCAGGCTGTAGGTGCTGGACCTCACAAACAGCTCCCTaGTACCCTCCCCGAAGCTGGCGATCTCATCCACTG +
Preference number: 6 (lower is better)
Translates to: SGCRCWTSQTAP*YPPRSWRSHPL
Trigger: CAGTGGATGAGATCGCCAGCTTCGGGGAGGGTAGCAGGGAGCTGTTTGTGAGGTCCAGCACCTACAGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CCA 72 bp TGGGTCCAGAGGAAGGCTCAGAATTTCGGCCCTCGGTaGCTGTCTGCTCAGCAGTGGTCAGACTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: WVQRKAQNFGPR*LSAQQWSDSMV
Trigger: CACCATGGAGTCTGACCACTGCTGAGCAGACAGCCACCGAGGGCCGAAATTCTGAGCCTTCCTCTGGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS CCA 72 bp ATGCGCTCCCGTAGCTGCTTCTCCCGCACCTCCAACTaGTCCAGCTCTAGTCGCATCTCATCAAAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: MRSRSCFSRTSN*SSSSRISSKPS
Trigger: GGAGGGCTTTGATGAGATGCGACTAGAGCTGGACCAGTTGGAGGTGCGGGAGAAGCAGCTACGGGAGCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp GTGTTCTGGGTGGCCTGGGTGACCTCCCACTGCTTCTaGAGCTCAGCTACCAAGCAAGTGAGGCGAACGTTG +
Preference number: 6 (lower is better)
Translates to: VFWVAWVTSHCF*SSATKQVRRTL
Trigger: CAACGTTCGCCTCACTTGCTTGGTAGCTGAGCTCCAGAAGCAGTGGGAGGTCACCCAGGCCACCCAGAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp TCTGCTGTGAGGACCTCAATCAGCTGGGTCTGCTGCTaGCACTGGCTCTCGAGAGCCCTAAGCTCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: SAVRTSISWVCC*HWLSRALSSLC
Trigger: GCACAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CTGCTATCAGGGGAGCCAGGGCCTTCACTGAGCTTCTaGAAACAGGCTCGGCAGCAGCGCTCCTTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: LLSGEPGPSLSF*KQARQQRSFLP
Trigger: TGGCAAAAAGGAGCGCTGCTGCCGAGCCTGTTTCCAGAAGCTCAGTGAAGGCCCTGGCTCCCCTGATAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CAA 72 bp GCCTCCTTCTCTGCCATCTGGGCTTTCATGGCCTCCTaGGCCTTCCTTACAGCCAGCAAGCTCGCCTCCATC +
Preference number: 6 (lower is better)
Translates to: ASFSAIWAFMAS*AFLTASKLASI
Trigger: GATGGAGGCGAGCTTGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGGCAGAGAAGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp AGCCAGCTCACGGGCTTCATTGTCAGTGGGTGGGCCAACTCCCTGTaGGCCTTTCTCTGCTGTGAGGACCTCAATCAGCTGGGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: SQLTGFIVSGWANSL*AFLCCEDLNQLGLL
Trigger: CAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCACCCACTGACAATGAAGCCCGTGAGCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp GCCCCTCGACGCCAGGTCAAACTGAACCTCAGTCAGCTCATAGAGTaGGCCCACAATGTCCGAGCTCAGCTTTGGCTGCAGAAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: APRRQVKLNLSQLIE*AHNVRAQLWLQKGA
Trigger: AGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGACATTGTGGGCCAACTCTATGAGCTGACTGAGGTTCAGTTTGACCTGGCGTCGAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp TGTAGAATGGCCTCCTTCTCTGCCATCTGGGCTTTCATGGCCTCCTaGGCCTTCCTTACAGCCAGCAAGCTCGCCTCCATCTGGTCACCC +
Preference number: 6 (lower is better)
Translates to: CRMASFSAIWAFMAS*AFLTASKLASIWSP
Trigger: GGGTGACCAGATGGAGGCGAGCTTGCTGGCTGTAAGGAAGGCCAAGGAGGCCATGAAAGCCCAGATGGCAGAGAAGGAGGCCATTCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp CGGCCCTTTGTGTCTGATGCCGTATCTGCCTTCTGCTaGGCCATGGCTAGCCAGCCTGGGAAGCTGGCTAAA +
Preference number: 6 (lower is better)
Translates to: RPFVSDAVSAFC*AMASQPGKLAK
Trigger: TTTAGCCAGCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGGCAGATACGGCATCAGACACAAAGGGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TTCTCTGCTGTGAGGACCTCAATCAGCTGGGTCTGCTaGTGGCACTGGCTCTCGAGAGCCCTAAGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: FSAVRTSISWVC*WHWLSRALSSL
Trigger: CAGAGAGCTTAGGGCTCTCGAGAGCCAGTGCCAGCAGCAGACCCAGCTGATTGAGGTCCTCACAGCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GCTTCTGGAAACAGGCTCGGCAGCAGCGCTCCTTTTTaGCACCGTGCTTGCTCAGGACGTAGTTGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: ASGNRLGSSAPF*HRACSGRSCCS
Trigger: GCTGCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCTGCCGAGCCTGTTTCCAGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000438446.1
ENST00000535325.5
CDS CCA 72 bp CGGGCTTCATTGTCAGTGGGTGGGCCAACTCCCTGTTaGCCTTTCTCTGCTGTGAGGACCTCAATCAGCTGG +
Preference number: 6 (lower is better)
Translates to: RASLSVGGPTPC*PFSAVRTSISW
Trigger: CCAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCACCCACTGACAATGAAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CAGATGATTCACAGAGCAGGTTTCCCAGACCCTTGCTaGCCCCGACAGACGCCTGTTCAGCCGCATTTGGGT +
Preference number: 6 (lower is better)
Translates to: QMIHRAGFPDPC*PRQTPVQPHLG
Trigger: ACCCAAATGCGGCTGAACAGGCGTCTGTCGGGGCCAGCAAGGGTCTGGGAAACCTGCTCTGTGAATCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535325.5
CDS CAA 90 bp CCGGGCATCCTCTTTCAGCTGAAGCTCCTTGACCAGCTGTTCCAGTaGGGCACTCTGCTGTCTGTTGACCTCCTCGACCTTGGTTCTCTC +
Preference number: 6 (lower is better)
Translates to: PGILFQLKLLDQLFQ*GTLLSVDLLDLGSL
Trigger: GAGAGAACCAAGGTCGAGGAGGTCAACAGACAGCAGAGTGCCCAACTGGAACAGCTGGTCAAGGAGCTTCAGCTGAAAGAGGATGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp CTGTTAAGGGCTTCATTCTGCTCCTTCAGCTGCTGCACAAGGGTTTaGTGCTCCCTCAGGACGGCCTCAGCCATGCTTAGCTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: LLRASFCSFSCCTRV*CSLRTASAMLSWLC
Trigger: GCAGAGCCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TGCATCTCCTGGGCCGCATCACTGGGAATAGGTTCTTaGCGGCCCTTTGTGTCTGATGCCGTATCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: CISWAASLGIGS*RPFVSDAVSAF
Trigger: GAAGGCAGATACGGCATCAGACACAAAGGGCCGGCAAGAACCTATTCCCAGTGATGCGGCCCAGGAGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TCATTCTGCTCCTTCAGCTGCTGCACAAGGGTTTTGTaGTCCCTCAGGACGGCCTCAGCCATGCTTAGCTGG +
Preference number: 6 (lower is better)
Translates to: SFCSFSCCTRVL*SLRTASAMLSW
Trigger: CCAGCTAAGCATGGCTGAGGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp TCCTTCCTCAGCATGGCCGCCTGGCACTCTGCAAGATaGTTGCTAGTGCAGCTCAGCTTCTCTCCCATGTCT +
Preference number: 6 (lower is better)
Translates to: SFLSMAAWHSAR*LLVQLSFSPMS
Trigger: AGACATGGGAGAGAAGCTGAGCTGCACTAGCAACCATCTTGCAGAGTGCCAGGCGGCCATGCTGAGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp ACCATCCAGCTGAACTCCCGCTTACAGTCGAGGCAGTaGTTTGCCTCTGTGTCTCCGAGCCATCTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: TIQLNSRLQSRQ*FASVSPSHLSS
Trigger: TGAGGAGAGATGGCTCGGAGACACAGAGGCAAACCACTGCCTCGACTGTAAGCGGGAGTTCAGCTGGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp ACGGGCTTCATTGTCAGTGGGTGGGCCAACTCCCTGTaGGCCTTTCTCTGCTGTGAGGACCTCAATCAGCTG +
Preference number: 6 (lower is better)
Translates to: TGFIVSGWANSL*AFLCCEDLNQL
Trigger: CAGCTGATTGAGGTCCTCACAGCAGAGAAAGGCCAACAGGGAGTTGGCCCACCCACTGACAATGAAGCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp CTCAGCACTGAGCTTCTGCTGGAATTCCAGGGCATCTaGCTTCTGCCAGAGAGCATCCTTGTCCCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: LSTELLLEFQGI*LLPESILVPEQ
Trigger: CTGCTCAGGGACAAGGATGCTCTCTGGCAGAAGTCAGATGCCCTGGAATTCCAGCAGAAGCTCAGTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp CTGCCCAGCAACCTACCATACCTTGCAAGTCTCGGATaGTTCTCTGGAGCTGGCTCTCTGCATTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: LPSNLPYLASLG*FSGAGSLHWWR
Trigger: CCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTGCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS GCA 72 bp GCTCTGTTAAGGGCTTCATTCTGCTCCTTCAGCTGCTaGACAAGGGTTTTGTGCTCCCTCAGGACGGCCTCA +
Preference number: 6 (lower is better)
Translates to: ALLRASFCSFSC*TRVLCSLRTAS
Trigger: TGAGGCCGTCCTGAGGGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp AGGCTCGGCAGCAGCGCTCCTTTTTGCCACCGTGCTTaGTCAGGACGTAGTTGTTGCAGCAGTAGTAACAGA +
Preference number: 6 (lower is better)
Translates to: RLGSSAPFCHRA*SGRSCCSSSNR
Trigger: TCTGTTACTACTGCTGCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAAAGGAGCGCTGCTGCCGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000438446.1
ENST00000535325.5
CDS GCA 72 bp AGTTCTCCAGACTTCAGCAGGCAGATTTCCGAATCCTaGCCCACGGGCATGTCTTCAGTGTCCTCAGGCGTT +
Preference number: 6 (lower is better)
Translates to: SSPDFSRQISES*PTGMSSVSSGV
Trigger: AACGCCTGAGGACACTGAAGACATGCCCGTGGGGCAGGATTCGGAAATCTGCCTGCTGAAGTCTGGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CCA 72 bp CCTTCTGCTGAGCCATGGCTAGCCAGCCTGGGAAGCTaGCTAAATGCTGGTTTTTCTTGTCCAGTGAGTCCC +
Preference number: 6 (lower is better)
Translates to: PSAEPWLASLGS*LNAGFSCPVSP
Trigger: GGGACTCACTGGACAAGAAAAACCAGCATTTAGCCAGCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp TTGTGTCTGATGCCGTATCTGCCTTCTGCTGAGCCATaGCTAGCCAGCCTGGGAAGCTGGCTAAATGCTGGT +
Preference number: 6 (lower is better)
Translates to: LCLMPYLPSAEP*LASLGSWLNAG
Trigger: ACCAGCATTTAGCCAGCTTCCCAGGCTGGCTAGCCATGGCTCAGCAGAAGGCAGATACGGCATCAGACACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp AGCTGGCTCTCTGCATTGGTGGAGGCCATGGTGAGTTaGCCTTTCTTGTCTGTATGTCTCCTGCCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: SWLSALVEAMVS*PFLSVCLLPGS
Trigger: GGACCCAGGCAGGAGACATACAGACAAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS CAA 72 bp CGCCAGGTCAAACTGAACCTCAGTCAGCTCATAGAGTaGGCCCACAATGTCCGAGCTCAGCTTTGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RQVKLNLSQLIE*AHNVRAQLWLQ
Trigger: CTGCAGCCAAAGCTGAGCTCGGACATTGTGGGCCAACTCTATGAGCTGACTGAGGTTCAGTTTGACCTGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp AGCTCCTGGACATGGGCTCTGTTAAGGGCTTCATTCTaGTCCTTCAGCTGCTGCACAAGGGTTTTGTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSWTWALLRASF*SFSCCTRVLCS
Trigger: GGAGCACAAAACCCTTGTGCAGCAGCTGAAGGAGCAGAATGAAGCCCTTAACAGAGCCCATGTCCAGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp AGCCCTGCCACAAGTCCCTCAAAACCAAACTCAGCCTaGCCAGCAACCTACCATACCTTGCAAGTCTCGGAT +
Preference number: 6 (lower is better)
Translates to: SPATSPSKPNSA*PATYHTLQVSD
Trigger: ATCCGAGACTTGCAAGGTATGGTAGGTTGCTGGGCAGGCTGAGTTTGGTTTTGAGGGACTTGTGGCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CCA 72 bp TCTGTCACAGCATCTTGCAAGTCTCGGATGATTCTCTaGAGCTGGCTCTCTGCATTGGTGGAGGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: SVTASCKSRMIL*SWLSALVEAMV
Trigger: CACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGATGCTGTGACAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CAACCTACCATACCTTGCAAGTCTCGGATGATTCTCTaGAGCTGGCTCTCTGCATTGGTGGAGGCCATGGTG +
Preference number: 6 (lower is better)
Translates to: QPTIPCKSRMIL*SWLSALVEAMV
Trigger: CACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CAA 72 bp TTGACCAGCTGTTCCAGTTGGGCACTCTGCTGTCTGTaGACCTCCTCGACCTTGGTTCTCTCCCTTTCTAGG +
Preference number: 6 (lower is better)
Translates to: LTSCSSWALCCL*TSSTLVLSLSR
Trigger: CCTAGAAAGGGAGAGAACCAAGGTCGAGGAGGTCAACAGACAGCAGAGTGCCCAACTGGAACAGCTGGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp CTCTTTCAGCTGAAGCTCCTTGACCAGCTGTTCCAGTaGGGCACTCTGCTGTCTGTTGACCTCCTCGACCTT +
Preference number: 6 (lower is better)
Translates to: LFQLKLLDQLFQ*GTLLSVDLLDL
Trigger: AAGGTCGAGGAGGTCAACAGACAGCAGAGTGCCCAACTGGAACAGCTGGTCAAGGAGCTTCAGCTGAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp CCTCAGTCAGCTCATAGAGTTGGCCCACAATGTCCGAGCTCAGCTTaGGCTGCAGAAAGGGGCTTCTTGCATAGTACCAGTCACTGGTCA +
Preference number: 6 (lower is better)
Translates to: PQSAHRVGPQCPSSA*AAERGFLHSTSHWS
Trigger: TGACCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGACATTGTGGGCCAACTCTATGAGCTGACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp AACCAAACTCAGCCTGCCCAGCAACCTACCATACCTTaGAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCT +
Preference number: 6 (lower is better)
Translates to: NQTQPAQQPTIP*KSRMILWSWLS
Trigger: AGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTGCTGGGCAGGCTGAGTTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CCA 72 bp ACAGCATCTTGCAAGTCTCGGATGATTCTCTGGAGCTaGCTCTCTGCATTGGTGGAGGCCATGGTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: TASCKSRMILWS*LSALVEAMVSL
Trigger: CAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGATGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp GTTCAGCCGCATTTGGGTCGAGAGAATCAGTTTCAGTaGGTGTTTCAGGCAAAGAGGAGCCGGACTCCTGTA +
Preference number: 6 (lower is better)
Translates to: VQPHLGRENQFQ*VFQAKRSRTPV
Trigger: TACAGGAGTCCGGCTCCTCTTTGCCTGAAACACCCACTGAAACTGATTCTCTCGACCCAAATGCGGCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CCA 72 bp ACCATACCTTGCAAGTCTCGGATGATTCTCTGGAGCTaGCTCTCTGCATTGGTGGAGGCCATGGTGAGTTTG +
Preference number: 6 (lower is better)
Translates to: TIPCKSRMILWS*LSALVEAMVSL
Trigger: CAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CAA 72 bp AGCTCTGAGATAGACTTGACAAAGCGGATCCCATCATaGGCTCCTTTCACCTTGGCCAGGCAGGCACAGAAG +
Preference number: 6 (lower is better)
Translates to: SSEIDLTKRIPS*APFTLARQAQK
Trigger: CTTCTGTGCCTGCCTGGCCAAGGTGAAAGGAGCCAATGATGGGATCCGCTTTGTCAAGTCTATCTCAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp GCTCATAGAGTTGGCCCACAATGTCCGAGCTCAGCTTaGGCTGCAGAAAGGGGCTTCTTGCATAGTACCAGT +
Preference number: 6 (lower is better)
Translates to: AHRVGPQCPSSA*AAERGFLHSTS
Trigger: ACTGGTACTATGCAAGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGACATTGTGGGCCAACTCTATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp CTGAGCAGCTCTATCAGCCGCTCCTCGAGATACTTCTaGGTTCTGTTGAGGTCATCCAGGTCAGCAAGCATC +
Preference number: 6 (lower is better)
Translates to: LSSSISRSSRYF*VLLRSSRSASI
Trigger: GATGCTTGCTGACCTGGATGACCTCAACAGAACCAAGAAGTATCTCGAGGAGCGGCTGATAGAGCTGCTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp TCCTTGTCCCTGAGCAGCTCTATCAGCCGCTCCTCGAGATACTTCTaGGTTCTGTTGAGGTCATCCAGGTCAGCAAGCATCTTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: SLSLSSSISRSSRYF*VLLRSSRSASIFWS
Trigger: TGACCAGAAGATGCTTGCTGACCTGGATGACCTCAACAGAACCAAGAAGTATCTCGAGGAGCGGCTGATAGAGCTGCTCAGGGACAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp AGTCCCTCAAAACCAAACTCAGCCTGCCCAGCAACCTACCATACCTaGCAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCTGCATTGGT +
Preference number: 6 (lower is better)
Translates to: SPSKPNSACPATYHT*QVSDDSLELALCIG
Trigger: ACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTATGGTAGGTTGCTGGGCAGGCTGAGTTTGGTTTTGAGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS CAA 90 bp GCATCTTGCAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCTGCATaGGTGGAGGCCATGGTGAGTTTGCCTTTCTTGTCTGTATGTCTC +
Preference number: 6 (lower is better)
Translates to: ASCKSRMILWSWLSA*VEAMVSLPFLSVCL
Trigger: GAGACATACAGACAAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp CTGAGCAGCTCTATCAGCCGCTCCTCGAGATACTTCTTGGTTCTGTaGAGGTCATCCAGGTCAGCAAGCATCTTCTGGTCATTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: LSSSISRSSRYFLVL*RSSRSASIFWSFLS
Trigger: TGAGAGGAATGACCAGAAGATGCTTGCTGACCTGGATGACCTCAACAGAACCAAGAAGTATCTCGAGGAGCGGCTGATAGAGCTGCTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp TGCTTAGTTCTGTCACAGCATCTTGCAAGTCTCGGATaGTTCTCTGGAGCTGGCTCTCTGCATTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: CLVLSQHLASLG*FSGAGSLHWWR
Trigger: CCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGATGCTGTGACAGAACTAAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp TTGCAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCTaGATTGGTGGAGGCCATGGTGAGTTTGCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: LQVSDDSLELAL*IGGGHGEFAFL
Trigger: AAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000471739.1
ENST00000535325.5
CDS GCA 72 bp TACCAGTCACTGGTCACTTTGGTGTTCATGAAGCACTaGTGTAAGGTGTCTGCCAACCTCTGGTGCACCAAG +
Preference number: 6 (lower is better)
Translates to: YQSLVTLVFMKH*CKVSANLWCTK
Trigger: CTTGGTGCACCAGAGGTTGGCAGACACCTTACAGCAGTGCTTCATGAACACCAAAGTGACCAGTGACTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GTCCGAGCTCAGCTTTGGCTGCAGAAAGGGGCTTCTTaGATAGTACCAGTCACTGGTCACTTTGGTGTTCAT +
Preference number: 6 (lower is better)
Translates to: VRAQLWLQKGAS*IVPVTGHFGVH
Trigger: ATGAACACCAAAGTGACCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp CCTTTTTGCCACCGTGCTTGCTCAGGACGTAGTTGTTaGAGCAGTAGTAACAGAAGATGCGGCCACATATCC +
Preference number: 6 (lower is better)
Translates to: PFCHRACSGRSC*SSSNRRCGHIS
Trigger: GGATATGTGGCCGCATCTTCTGTTACTACTGCTGCAACAACTACGTCCTGAGCAAGCACGGTGGCAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296137.7
ENST00000438446.1
ENST00000535325.5
CDS CCA 72 bp ATGCCTCGTTGTTTAGGGGGCTGTTCAGGTCAAAGTTaGACACCATCTCTTGAGTCTGCAGGTAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: MPRCLGGCSGQS*TPSLESAGSCS
Trigger: TGAGCAGCTACCTGCAGACTCAAGAGATGGTGTCCAACTTTGACCTGAACAGCCCCCTAAACAACGAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp CTCATCTGTGATGATATCAAACACAGCGTCGTCCGGTaGCCTGTAGTCTGTATTTGCTCCTTGGCCTCCTGT +
Preference number: 6 (lower is better)
Translates to: LICDDIKHSVVR*PVVCICSLASC
Trigger: ACAGGAGGCCAAGGAGCAAATACAGACTACAGGCCACCGGACGACGCTGTGTTTGATATCATCACAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CAA 72 bp TGTCCGAGCTCAGCTTTGGCTGCAGAAAGGGGCTTCTaGCATAGTACCAGTCACTGGTCACTTTGGTGTTCA +
Preference number: 6 (lower is better)
Translates to: CPSSALAAERGF*HSTSHWSLWCS
Trigger: TGAACACCAAAGTGACCAGTGACTGGTACTATGCAAGAAGCCCCTTTCTGCAGCCAAAGCTGAGCTCGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp ATACCTTGCAAGTCTCGGATGATTCTCTGGAGCTGGCTCTCTGCATaGGTGGAGGCCATGGTGAGTTTGCCTTTCTTGTCTGTATGTCTC +
Preference number: 6 (lower is better)
Translates to: IPCKSRMILWSWLSA*VEAMVSLPFLSVCL
Trigger: GAGACATACAGACAAGAAAGGCAAACTCACCATGGCCTCCACCAATGCAGAGAGCCAGCTCCAGAGAATCATCCGAGACTTGCAAGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS TCA 72 bp CTGGTGCTGTCATCCGTGATGGGTTCCCCTGCTTCCTaGAATTCTTTGCTTAGTTCTGTCACAGCATCTTGC +
Preference number: 6 (lower is better)
Translates to: LVLSSVMGSPAS*NSLLSSVTASC
Trigger: GCAAGATGCTGTGACAGAACTAAGCAAAGAATTTCAGGAAGCAGGGGAACCCATCACGGATGACAGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp CTATCAGCCGCTCCTCGAGATACTTCTTGGTTCTGTTaGGGTCATCCAGGTCAGCAAGCATCTTCTGGTCAT +
Preference number: 6 (lower is better)
Translates to: LSAAPRDTSWFC*GHPGQQASSGH
Trigger: ATGACCAGAAGATGCTTGCTGACCTGGATGACCTCAACAGAACCAAGAAGTATCTCGAGGAGCGGCTGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS GCA 72 bp GGCAGGCACAGAAGTAATCCCAGTAGTCCTTCTTGTTaGCCAGGAGGGTGGCCTTCTCTTTCTGATCAAATT +
Preference number: 6 (lower is better)
Translates to: GRHRSNPSSPSC*PGGWPSLSDQI
Trigger: AATTTGATCAGAAAGAGAAGGCCACCCTCCTGGGCAACAAGAAGGACTACTGGGATTACTTCTGTGCCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS TCA 72 bp TTGCATAGTACCAGTCACTGGTCACTTTGGTGTTCATaGAGCACTGCTGTAAGGTGTCTGCCAACCTCTGGT +
Preference number: 6 (lower is better)
Translates to: LHSTSHWSLWCS*STAVRCLPTSG
Trigger: ACCAGAGGTTGGCAGACACCTTACAGCAGTGCTTCATGAACACCAAAGTGACCAGTGACTGGTACTATGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp AGTAATCCCAGTAGTCCTTCTTGTTGCCCAGGAGGGTaGCCTTCTCTTTCTGATCAAATTGCAGGAGATACT +
Preference number: 6 (lower is better)
Translates to: SNPSSPSCCPGG*PSLSDQIAGDT
Trigger: AGTATCTCCTGCAATTTGATCAGAAAGAGAAGGCCACCCTCCTGGGCAACAAGAAGGACTACTGGGATTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp GGTGTTTCAGGCAAAGAGGAGCCGGACTCCTGTATCTaGCACAATTCCTCATCTGTGATGATATCAAACACA +
Preference number: 6 (lower is better)
Translates to: GVSGKEEPDSCI*HNSSSVMISNT
Trigger: TGTGTTTGATATCATCACAGATGAGGAATTGTGCCAGATACAGGAGTCCGGCTCCTCTTTGCCTGAAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296137.7
ENST00000433878.5
ENST00000438446.1
ENST00000535325.5
CDS CAA 90 bp GGTCATCCAGGTCAGCAAGCATCTTCTGGTCATTCCTCTCACGATTaGTCACCTCCTGGCAGAGTTTGTTGTAATACTCTTGGATTTTTG +
Preference number: 6 (lower is better)
Translates to: GHPGQQASSGHSSHD*SPPGRVCCNTLGFL
Trigger: CAAAAATCCAAGAGTATTACAACAAACTCTGCCAGGAGGTGACAAATCGTGAGAGGAATGACCAGAAGATGCTTGCTGACCTGGATGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 72 bp GGTCAGCAAGCATCTTCTGGTCATTCCTCTCACGATTaGTCACCTCCTGGCAGAGTTTGTTGTAATACTCTT +
Preference number: 6 (lower is better)
Translates to: GQQASSGHSSHD*SPPGRVCCNTL
Trigger: AAGAGTATTACAACAAACTCTGCCAGGAGGTGACAAATCGTGAGAGGAATGACCAGAAGATGCTTGCTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp TTGTCACCTCCTGGCAGAGTTTGTTGTAATACTCTTGGATTTTTGTaGTGGCTTTTTCGAGTTCCTTCTGGGTCCTTTCTAGGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: LSPPGRVCCNTLGFL*WLFRVPSGSFLGLH
Trigger: GTGAAGACCTAGAAAGGACCCAGAAGGAACTCGAAAAAGCCACAACAAAAATCCAAGAGTATTACAACAAACTCTGCCAGGAGGTGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CAA 90 bp GATTTGTCACCTCCTGGCAGAGTTTGTTGTAATACTCTTGGATTTTaGTTGTGGCTTTTTCGAGTTCCTTCTGGGTCCTTTCTAGGTCTT +
Preference number: 6 (lower is better)
Translates to: DLSPPGRVCCNTLGF*LWLFRVPSGSFLGL
Trigger: AAGACCTAGAAAGGACCCAGAAGGAACTCGAAAAAGCCACAACAAAAATCCAAGAGTATTACAACAAACTCTGCCAGGAGGTGACAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296137.7
ENST00000535325.5
CDS CCA 72 bp AGGAAACCAGGCAAGCTTTCCAAGCCTTACACAAGGTaGATATTTGAGACCCAAATATTTCAATATGATGTG +
Preference number: 6 (lower is better)
Translates to: RKPGKLSKPYTR*IFETQIFQYDV
Trigger: CACATCATATTGAAATATTTGGGTCTCAAATATCCACCTTGTGTAAGGCTTGGAAAGCTTGCCTGGTTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1
CDS TCA 72 bp GGTGGATATTTGAGACCCAAATATTTCAATATGATGTaGCCTGAGGACTCCAATTACTCGTTGTGTGAACAA +
Preference number: 6 (lower is better)
Translates to: GGYLRPKYFNMM*PEDSNYSLCEQ
Trigger: TTGTTCACACAACGAGTAATTGGAGTCCTCAGGTCACATCATATTGAAATATTTGGGTCTCAAATATCCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471739.1