RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FYB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000082074

Ensembl transcript IDs: ENST00000351578.12, ENST00000503065.1, ENST00000504542.1, ENST00000506557.5, ENST00000509072.5, ENST00000510188.1, ENST00000512138.1, ENST00000512982.4, ENST00000515010.5, ENST00000644817.1, ENST00000646045.2, ENST00000646444.1

Found 499 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCACTTCATCTCTGTGAAGATTTTCAGTTCCTTTACAGTTATTTaGAATTATTTCAATTCTGTGGAGCCACTTCAGAAACTCCAATGG +
Preference number: 1 (lower is better)
Translates to: PHFISVKIFSSFTVI*NYFNSVEPLQKLQW
Trigger: CCATTGGAGTTTCTGAAGTGGCTCCACAGAATTGAAATAATTTCAAATAACTGTAAAGGAACTGAAAATCTTCACAGAGATGAAGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCACATGGTCATATACTaGCTAGTGCTCTCTAAAAGT +
Preference number: 2 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGHMVIY*LVLSKS
Trigger: ACTTTTAGAGAGCACTAGCCAGTATATGACCATGTG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCAGGAGGATTATTTACTaGTGGTCTAAAAGAAGTACC +
Preference number: 2 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGRRIIY*WSKRST
Trigger: GGTACTTCTTTTAGACCACCAGTAAATAATCCTCCT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCAGGATTATTTACTGGTaGTCTAAAAGAAGTACCTTC +
Preference number: 2 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGRIIYW*SKRSTF
Trigger: GAAGGTACTTCTTTTAGACCACCAGTAAATAATCCT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR TCA 90 bp CATCATAGATCTCTCCATCATTGTCCGCTAGGTAACTCCGAAGGACATAACCATCCAACATTAGTTCCTTaGCTCATCTCTGCTGATGAA +
Preference number: 2 (lower is better)
Translates to: HHRSLHHCPLGNSEGHNHPTLVP*LISADE
Trigger: TTCATCAGCAGAGATGAGTCAAGGAACTAATGTTGG...ATGGTTATGTCCTTCGGAGTTACCTAGCGGACAATGATGGAGAGATCTATGATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646444.1
3UTR-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCAGGAGGATTATTTACTaGTGGTCTAAAAGAAGTACC +
Preference number: 2 (lower is better)
Translates to: GHSESLASLSRSPQTKAGRRIIY*WSKRST
Trigger: GGTACTTCTTTTAGACCACCAGTAAATAATCCTCCT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCATTATTTCAATTCTGTaGAGCCACTTCAGAAACTCC +
Preference number: 2 (lower is better)
Translates to: GHSESLASLSRSPQTKAGIISIL*SHFRNS
Trigger: GGAGTTTCTGAAGTGGCTCCACAGAATTGAAATAAT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGAAGAGCCAGCATTATaGTGTACTCATTTTGTACTC +
Preference number: 2 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCEEPAL*CTHFVL
Trigger: GAGTACAAAATGAGTACATCATAATGCTGGCTCTTC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAGGATTATTTACTGGTaGTCTAAAAGAAGTACCTTC +
Preference number: 2 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNRIIYW*SKRSTF
Trigger: GAAGGTACTTCTTTTAGACCACCAGTAAATAATCCT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTAGGATTATTTACTGGTaGTCTAAAAGAAGTACCTTC +
Preference number: 2 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVRIIYW*SKRSTF
Trigger: GAAGGTACTTCTTTTAGACCACCAGTAAATAATCCT...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR TCA 72 bp AAATTACTGTCAGACTGCAATGCAAGTCTGCCCCAATaGAGGCAGGAGGAGGGATGGCTGGAAGTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: KLLSDCNASLPQ*RQEEGWLEVSQ
Trigger: CTGAGACACTTCCAGCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTGTTTTTGGATTGCTTaGGGAATGAGTATGTACTGT +
Preference number: 3 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGCFWIA*GMSMYC
Trigger: ACAGTACATACTCATTCCCAAAGCAATCCAAAAACA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CAA 90 bp CATCATAGATCTCTCCATCATTGTCCGCTAGGTAACTCCGAAGGACATAACCATATCTCCCATGTCCAATaGTTTAGGAGGAGCAGGGAA +
Preference number: 3 (lower is better)
Translates to: HHRSLHHCPLGNSEGHNHISHVQ*FRRSRE
Trigger: TTCCCTGCTCCTCCTAAACAATTGGACATGGGAGAT...ATGGTTATGTCCTTCGGAGTTACCTAGCGGACAATGATGGAGAGATCTATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646444.1
3UTR-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTGTTTTTGGATTGCTTaGGGAATGAGTATGTACTGT +
Preference number: 3 (lower is better)
Translates to: GHSESLASLSRSPQTKAGCFWIA*GMSMYC
Trigger: ACAGTACATACTCATTCCCAAAGCAATCCAAAAACA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
3UTR-3UTR CAA 90 bp CATCATAGATCTCTCCATCATTGTCCGCTAGGTAACTCCGAAGGACATAACCATTTCTGCAGAGAACTTTaGTGTCATCTGTGGTTTGTA +
Preference number: 3 (lower is better)
Translates to: HHRSLHHCPLGNSEGHNHFCREL*CHLWFV
Trigger: TACAAACCACAGATGACACAAAAGTTCTCTGCAGAA...ATGGTTATGTCCTTCGGAGTTACCTAGCGGACAATGATGGAGAGATCTATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646444.1
3UTR-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCAAATGGTTCACATTTaGTTTTTGGATTGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVQMVHI*FLDCFG
Trigger: CCCAAAGCAATCCAAAAACAAAATGTGAACCATTTG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGGTTGGCTGGCCGGATaGGATGGTGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGGWLAG*DGGGGG
Trigger: GCCACCACCTCCACCATCCCATCCGGCCAGCCAACC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTCGCCTCGGGGTCTCTaGTGGTCAAGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGSPRGL*WSSWLV
Trigger: CACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGGCCGGATGGGATGGTaGAGGTGGTGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGGRMGW*RWWQGS
Trigger: ACTTCCCTGCCACCACCTCCACCATCCCATCCGGCC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGCAAGTCTGCCCCAATaGAGGCAGGAGGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGASLPQ*RQEEGW
Trigger: CCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCCTCGGGGTCTCTGGTaGTCAAGCTGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGPRGLW*SSWLVF
Trigger: GAACACCAGCCAGCTTGACCACCAGAGACCCCGAGG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGGCCAAAGGCGGGTTTaGGGAAGAGGGGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGGQRRV*GRGAWV
Trigger: AACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCATGCCTGGCACACAATaGCCCCGAAGATGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGMPGTQ*PRRWCS
Trigger: GCTGCACCATCTTCGGGGTCATTGTGTGCCAGGCAT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646045.2
CDS-3UTR GCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGACCTGGGCCTCCCCTaGTCGCAGCAGGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGDLGLP*SQQVSK
Trigger: TTTTGAAACCTGCTGCGAGCAGGGGAGGCCCAGGTC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGTGAGATGCTGGCAATaGTGGTTGGCTGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGVRCWQ*WLAGRM
Trigger: CATCCGGCCAGCCAACCACCATTGCCAGCATCTCAC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCTTCTTTGGGCAAGTTaGTGGGCTTGGGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGLLWAS*WAWGLQ
Trigger: CTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGGTGGTTGTGATGGGTaGGATGCTGGCAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGGGCDG*DAGNGG
Trigger: ACCACCATTGCCAGCATCTCACCCATCACAACCACC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTGGGACTGGTGGTTGTaGTGGGTGAGATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGWDWWL*WVRCWQ
Trigger: TTGCCAGCATCTCACCCATCACAACCACCAGTCCCA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTTTAGTGGATCTTCCTaGGCCAGGGTCTGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGFSGSS*ARVWAL
Trigger: TAGGGCCCAGACCCTGGCCCAGGAAGATCCACTAAA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCCTCAGAAGAAGGTTTaGCTGCCACAGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGPQKKV*LPQVAL
Trigger: CAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGGTGTTCCGAATCTTTaGCCTGCTCCAGTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGGVPNL*PAPVGF
Trigger: AAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGGTTGGCTGGCCGGATaGGATGGTGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGGWLAG*DGGGGG
Trigger: GCCACCACCTCCACCATCCCATCCGGCCAGCCAACC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCAGGAAAGGGCAAACTTaGAATCTCCCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGRKGQT*NLPCMV
Trigger: GACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTGGCAGGGAAGTTGTTaGGTAAGACGTCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGWQGSC*VRRLAF
Trigger: AAAGGCCAGACGTCTTACTCAACAACTTCCCTGCCA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTTTGACTGCCACAGGTaGCTTTGGGGACCCAAACTT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGFDCHR*LWGPKL
Trigger: AAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTGGGGAAGAGGGGCTTaGGTTCAAGATCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGWGRGA*VQDLVM
Trigger: CATCACAAGATCTTGAACCCAAGCCCCTCTTCCCCA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGCTTCTGTTTCGGGGTaGCTGAATTCTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGASVSG*LNSCLP
Trigger: AGGGAGACAAGAATTCAGCCACCCCGAAACAGAAGC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGGCCGGATGGGATGGTaGAGGTGGTGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGGRMGW*RWWQGS
Trigger: ACTTCCCTGCCACCACCTCCACCATCCCATCCGGCC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGTCATCATCTGGTGGTaGAGGGAATATCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGVIIWW*REYPST
Trigger: AGTGGAGGGATATTCCCTCCACCACCAGATGATGAC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCATCTTCAATAGGTCTTaGAGGGGCACCAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGIFNRS*RGTKRV
Trigger: GACTCTCTTGGTGCCCCTTCAAGACCTATTGAAGAT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCTGTCGCATCTGCTCTaGATGTGGAACTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGLSHLL*MWNSRT
Trigger: AGTTCTTGAGTTCCACATGCAGAGCAGATGCGACAG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR GCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTCTAGCTGTCGCATCTaGTCTGCATGTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGSSCRI*SACGTQ
Trigger: TTGAGTTCCACATGCAGAGCAGATGCGACAGCTAGA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCAGGTCAACATTTGGTaGTCTGTTGGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGQVNIW*SVGFWW
Trigger: CCACCAAAACCCAACAGACCACCAAATGTTGACCTG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCGTCAGGTCAACATTTaGTGGTCTGTTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGRQVNI*WSVGFW
Trigger: CCAAAACCCAACAGACCACCAAATGTTGACCTGACG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGGCCGCTTTTGGACCTaGCTCCCAGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSGRFWT*LPGELG
Trigger: CCCCAGCTCCCCTGGGAGTCAGGTCCAAAAGCGGCC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGGCCGCTTTTGGACCTaGCTCCCAGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCGRFWT*LPGELG
Trigger: CCCCAGCTCCCCTGGGAGTCAGGTCCAAAAGCGGCC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGAGGCCAACTCTTCCTaGTTTATTTTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGEANSS*FILLWK
Trigger: CTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGTATTACTCTTCTCTTaGACCTGTAGTGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGVLLFS*TCSVEP
Trigger: TGGCTCCACACTACAGGTTCAAGAGAAGAGTAATAC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGACCTGGGCCTCCCCTaGTCGCAGCAGGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGDLGLP*SQQVSK
Trigger: TTTTGAAACCTGCTGCGAGCAGGGGAGGCCCAGGTC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCATTTTTGGAGAGACCTaGGCCTCCCCTGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGIFGET*ASPARS
Trigger: GCTGCGAGCAGGGGAGGCCCAGGTCTCTCCAAAAAT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTCTGCCTTTCCATCCTaGCTCCTGCAGAAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGSAFPS*LLQKKA
Trigger: CGCCTTCTTCTGCAGGAGTCAGGATGGAAAGGCAGA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTGTTATATTTCGCCATaGGGGACTTTACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGCYISP*GTLHLP
Trigger: AGGCAGATGTAAAGTCCCTCATGGCGAAATATAACA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGGGTCGGCTATTGACTaGGACATCCTCTGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGGSAID*DILCRV
Trigger: AACCCGACAGAGGATGTCTCAGTCAATAGCCGACCC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCTTCTTTGGGCAAGTTaGTGGGCTTGGGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGLLWAS*WAWGLQ
Trigger: CTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGCCGCTTTTGGACCTaGCTCCCAGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGRFWT*LPGELG
Trigger: CCCCAGCTCCCCTGGGAGTCAGGTCCAAAAGCGGCC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCCAACATTAGTTCCTTaGCTCATCTCTGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGPTLVP*LISADE
Trigger: TTCATCAGCAGAGATGAGTCAAGGAACTAATGTTGG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTTTGGCCTGCTCCAGTaGGCTTTAGAAACGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGFGLLQ*ALETGA
Trigger: AGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGGTTGGCTGGCCGGATaGGATGGTGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTGWLAG*DGGGGG
Trigger: GCCACCACCTCCACCATCCCATCCGGCCAGCCAACC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCATAAATGTCATCATCTaGTGGTGGAGGGAATATCCC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGINVII*WWREYP
Trigger: GGGATATTCCCTCCACCACCAGATGATGACATTTAT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGGCCGCTTTTGGACCTaGCTCCCAGGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVGRFWT*LPGELG
Trigger: CCCCAGCTCCCCTGGGAGTCAGGTCCAAAAGCGGCC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCAGAATGACCAAAGTTaGGTGCTAGTCATTGTCATA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGQNDQS*VLVIVI
Trigger: TATGACAATGACTAGCACTCAACTTTGGTCATTCTG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCATCCTCTGTCGGGTTaGCCCCCGTGTTATATTTCG +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGHPLSG*PPCYIS
Trigger: CGAAATATAACACGGGGGGCAACCCGACAGAGGATG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTGCCACAGGTGGCTTTaGGGACCCAAACTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGCHRWL*GPKLRY
Trigger: GTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATCGCCTCGGGGTCTCTaGTGGTCAAGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSPRGL*WSSWLV
Trigger: CACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCTTAGGGGCGGCTTCTaGCCAAAGGCGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCLRGGF*PKAGLG
Trigger: CCCCAAACCCGCCTTTGGCCAGAAGCCGCCCCTAAG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGAAATCTCCCCTGCATaGTCTTTATTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGEISPA*SLFSES
Trigger: AGACTCAGAAAATAAAGACCATGCAGGGGAGATTTC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCAAACAAGGGAGGCAATaGCTTCTGTTTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGKQGRQ*LLFRGG
Trigger: GCCACCCCGAAACAGAAGCCATTGCCTCCCTTGTTT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGGCCGGATGGGATGGTaGAGGTGGTGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSGRMGW*RWWQGS
Trigger: ACTTCCCTGCCACCACCTCCACCATCCCATCCGGCC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGGCCGGATGGGATGGTaGAGGTGGTGGCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTGRMGW*RWWQGS
Trigger: ACTTCCCTGCCACCACCTCCACCATCCCATCCGGCC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCTGTTTCGGGGTGGCTaGATTCTTGTCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGLFRGG*ILVSLF
Trigger: GAAAAGGGAGACAAGAATTCAGCCACCCCGAAACAG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCCTCCACTTCCACTCTaGCTGTGGCTGCTAATATCA +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGPPLPL*LWLLIS
Trigger: TGATATTAGCAGCCACAGTCAGAGTGGAAGTGGAGG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTTTATTGAAAAGAGTTaGTATGCCTGGCACACAATG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGFIEKS*YAWHTM
Trigger: CATTGTGTGCCAGGCATATCAACTCTTTTCAATAAA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646045.2
CDS-3UTR GCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCAATTTGGGAAACGCTTaGTTCTGTTCATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGNLGNA*FCSFSE
Trigger: CTCAGAAAATGAACAGAAGCAAGCGTTTCCCAAATT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCACTCCAATGGGCCTTTaGAATATTAAAATGTGGAGA +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGTPMGL*NIKMWR
Trigger: TCTCCACATTTTAATATTGCAAAGGCCCATTGGAGT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTCCTGGGCCAGGGTCTaGGCCCTACTCACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSSWARV*ALLTSS
Trigger: GCTAGAAGTGAGTAGGGCCCAGACCCTGGCCCAGGA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATCCTGGGCCAGGGTCTaGGCCCTACTCACTTCTAGC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSWARV*ALLTSS
Trigger: GCTAGAAGTGAGTAGGGCCCAGACCCTGGCCCAGGA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTTTGACTGCCACAGGTaGCTTTGGGGACCCAAACTT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGFDCHR*LWGPKL
Trigger: AAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCTCTGGTGGTCAAGCTaGCTGGTGTTCCGAATCTTT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGLWWSS*LVFRIF
Trigger: AAAGATTCGGAACACCAGCCAGCTTGACCACCAGAG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCCTCGGGGTCTCTGGTaGTCAAGCTGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSPRGLW*SSWLVF
Trigger: GAACACCAGCCAGCTTGACCACCAGAGACCCCGAGG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCCTCGGGGTCTCTGGTaGTCAAGCTGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCPRGLW*SSWLVF
Trigger: GAACACCAGCCAGCTTGACCACCAGAGACCCCGAGG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTCGCCTCGGGGTCTCTaGTGGTCAAGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNSPRGL*WSSWLV
Trigger: CACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGGCCAAAGGCGGGTTTaGGGAAGAGGGGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTGQRRV*GRGAWV
Trigger: AACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGGCCAAAGGCGGGTTTaGGGAAGAGGGGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSGQRRV*GRGAWV
Trigger: AACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCTTAGGGGCGGCTTCTaGCCAAAGGCGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNLRGGF*PKAGLG
Trigger: CCCCAAACCCGCCTTTGGCCAGAAGCCGCCCCTAAG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTTTCTTCACCATTTTTaGAGAGACCTGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGFLHHF*RDLGLP
Trigger: GGGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGCTTCTGTTTCGGGGTaGCTGAATTCTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGASVSG*LNSCLP
Trigger: AGGGAGACAAGAATTCAGCCACCCCGAAACAGAAGC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGGTTGGCTGGCCGGATaGGATGGTGGAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVGWLAG*DGGGGG
Trigger: GCCACCACCTCCACCATCCCATCCGGCCAGCCAACC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGCAATGGTGGTTGGCTaGCCGGATGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSAMVVG*PDGMVE
Trigger: CTCCACCATCCCATCCGGCCAGCCAACCACCATTGC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGCAATGGTGGTTGGCTaGCCGGATGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCAMVVG*PDGMVE
Trigger: CTCCACCATCCCATCCGGCCAGCCAACCACCATTGC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGCTGGCAATGGTGGTTaGCTGGCCGGATGGGATGGT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCAGNGG*LAGWDG
Trigger: ACCATCCCATCCGGCCAGCCAACCACCATTGCCAGC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGCTGGCAATGGTGGTTaGCTGGCCGGATGGGATGGT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTAGNGG*LAGWDG
Trigger: ACCATCCCATCCGGCCAGCCAACCACCATTGCCAGC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCATTATTTCAATTCTGTaGAGCCACTTCAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGIISIL*SHFRNS
Trigger: GGAGTTTCTGAAGTGGCTCCACAGAATTGAAATAAT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGGCAGGAGGAGTCCCTaGGGCCAACTCTTCCTGATT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCGRRSP*GQLFLI
Trigger: AATCAGGAAGAGTTGGCCTCAGGGACTCCTCCTGCC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCACCATCAGAGTGCGTaGCACCATCTTGATTGTCTT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGHHQSA*HHLDCL
Trigger: AAGACAATCAAGATGGTGTCACGCACTCTGATGGTG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCTGTCGCATCTGCTCTaGATGTGGAACTCAAGAACT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGLSHLL*MWNSRT
Trigger: AGTTCTTGAGTTCCACATGCAGAGCAGATGCGACAG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR GCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGACCTGGGCCTCCCCTaGTCGCAGCAGGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCDLGLP*SQQVSK
Trigger: TTTTGAAACCTGCTGCGAGCAGGGGAGGCCCAGGTC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCAATATCATCCTGCTCTaGAACATCATCATATACTTC +
Preference number: 4 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGNIILL*NIIIYF
Trigger: GAAGTATATGATGATGTTGCAGAGCAGGATGATATT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCCTCGGGGTCTCTGGTaGTCAAGCTGGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNPRGLW*SSWLVF
Trigger: GAACACCAGCCAGCTTGACCACCAGAGACCCCGAGG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTCGCCTCGGGGTCTCTaGTGGTCAAGCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVSPRGL*WSSWLV
Trigger: CACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGCCAAAGGCGGGTTTaGGGAAGAGGGGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGQRRV*GRGAWV
Trigger: AACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACTTAGGGGCGGCTTCTaGCCAAAGGCGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVLRGGF*PKAGLG
Trigger: CCCCAAACCCGCCTTTGGCCAGAAGCCGCCCCTAAG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCTTAGGGGCGGCTTCTaGCCAAAGGCGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVLRGGF*PKAGLG
Trigger: CCCCAAACCCGCCTTTGGCCAGAAGCCGCCCCTAAG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAATTTTTGGAGAGACCTaGGCCTCCCCTGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTIFGET*ASPARS
Trigger: GCTGCGAGCAGGGGAGGCCCAGGTCTCTCCAAAAAT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTATTTTTGGAGAGACCTaGGCCTCCCCTGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSIFGET*ASPARS
Trigger: GCTGCGAGCAGGGGAGGCCCAGGTCTCTCCAAAAAT...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCGTCAGGTCAACATTTaGTGGTCTGTTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGRQVNI*WSVGFW
Trigger: CCAAAACCCAACAGACCACCAAATGTTGACCTGACG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGCAATGGTGGTTGGCTaGCCGGATGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNAMVVG*PDGMVE
Trigger: CTCCACCATCCCATCCGGCCAGCCAACCACCATTGC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTAGATGCTGGCAATGGTaGTTGGCTGGCCGGATGGGA +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCRCWQW*LAGRMG
Trigger: TCCCATCCGGCCAGCCAACCACCATTGCCAGCATCT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAGATGCTGGCAATGGTaGTTGGCTGGCCGGATGGGA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTRCWQW*LAGRMG
Trigger: TCCCATCCGGCCAGCCAACCACCATTGCCAGCATCT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGTGAGATGCTGGCAATaGTGGTTGGCTGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCVRCWQ*WLAGRM
Trigger: CATCCGGCCAGCCAACCACCATTGCCAGCATCTCAC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCAATGTCATCATCTGGTaGTGGAGGGAATATCCCTCC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGNVIIW*WREYPS
Trigger: GGAGGGATATTCCCTCCACCACCAGATGATGACATT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTAGGAGGAGGGATGGCTaGAAGTGTCTCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCRRRDG*KCLRAL
Trigger: GAGTGCCCTGAGACACTTCCAGCCATCCCTCCTCCT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACTTCTTTGGGCAAGTTaGTGGGCTTGGGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTLLWAS*WAWGLQ
Trigger: CTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGAGGCCAACTCTTCCTaGTTTATTTTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGEANSS*FILLWK
Trigger: CTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGCAGGAGGAGTCCCTaGGGCCAACTCTTCCTGATT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGRRSP*GQLFLI
Trigger: AATCAGGAAGAGTTGGCCTCAGGGACTCCTCCTGCC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGGTGGTTGTGATGGGTaGGATGCTGGCAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCGGCDG*DAGNGG
Trigger: ACCACCATTGCCAGCATCTCACCCATCACAACCACC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGGTGGTTGTGATGGGTaGGATGCTGGCAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSGGCDG*DAGNGG
Trigger: ACCACCATTGCCAGCATCTCACCCATCACAACCACC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATGGGACTGGTGGTTGTaGTGGGTGAGATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTWDWWL*WVRCWQ
Trigger: TTGCCAGCATCTCACCCATCACAACCACCAGTCCCA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGCAAGTCTGCCCCAATaGAGGCAGGAGGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVASLPQ*RQEEGW
Trigger: CCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGCAAGTCTGCCCCAATaGAGGCAGGAGGAGGGATGG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVASLPQ*RQEEGW
Trigger: CCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGACCTGGGCCTCCCCTaGTCGCAGCAGGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNDLGLP*SQQVSK
Trigger: TTTTGAAACCTGCTGCGAGCAGGGGAGGCCCAGGTC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTTGGCCTGCTCCAGTaGGCTTTAGAAACGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFGLLQ*ALETGA
Trigger: AGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGGTGGTCAAGCTGGCTaGTGTTCCGAATCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCGGQAG*CSESLA
Trigger: GGCCAAAGATTCGGAACACCAGCCAGCTTGACCACC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGGTGGTCAAGCTGGCTaGTGTTCCGAATCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSGGQAG*CSESLA
Trigger: GGCCAAAGATTCGGAACACCAGCCAGCTTGACCACC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGGTGGTCAAGCTGGCTaGTGTTCCGAATCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTGGQAG*CSESLA
Trigger: GGCCAAAGATTCGGAACACCAGCCAGCTTGACCACC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCAAGACACATTCTTCATaGGGCTTTCGTCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGKTHSS*GFRLHG
Trigger: CCCATGAAGACGAAAGCCCCATGAAGAATGTGTCTT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGCAATGGTGGTTGGCTaGCCGGATGGGATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVAMVVG*PDGMVE
Trigger: CTCCACCATCCCATCCGGCCAGCCAACCACCATTGC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGCTGGCAATGGTGGTTaGCTGGCCGGATGGGATGGT +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVAGNGG*LAGWDG
Trigger: ACCATCCCATCCGGCCAGCCAACCACCATTGCCAGC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGCTGGCAATGGTGGTTaGCTGGCCGGATGGGATGGT +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVAGNGG*LAGWDG
Trigger: ACCATCCCATCCGGCCAGCCAACCACCATTGCCAGC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAGATGCTGGCAATGGTaGTTGGCTGGCCGGATGGGA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNRCWQW*LAGRMG
Trigger: TCCCATCCGGCCAGCCAACCACCATTGCCAGCATCT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGTGAGATGCTGGCAATaGTGGTTGGCTGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNVRCWQ*WLAGRM
Trigger: CATCCGGCCAGCCAACCACCATTGCCAGCATCTCAC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCAACCATTTTCCTTCTaGGTTGTCTGTGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGQPFSF*VVCDAD
Trigger: ATCCGCATCACAGACAACCCAGAAGGAAAATGGTTG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACCTCAGAAGAAGGTTTaGCTGCCACAGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTPQKKV*LPQVAL
Trigger: CAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCCTCAGAAGAAGGTTTaGCTGCCACAGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSPQKKV*LPQVAL
Trigger: CAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTCTTGGTTTACACTGTaGAGAGATGGCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGSWFTL*RDGLFP
Trigger: TGGAAACAAGCCATCTCTTCACAGTGTAAACCAAGA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGTGGTTGTGATGGGTaGGATGCTGGCAATGGTGGT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGGCDG*DAGNGG
Trigger: ACCACCATTGCCAGCATCTCACCCATCACAACCACC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTGGGACTGGTGGTTGTaGTGGGTGAGATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNWDWWL*WVRCWQ
Trigger: TTGCCAGCATCTCACCCATCACAACCACCAGTCCCA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCATGTCCAATTGTTTAGGAGGAGCAGGGAAAACTGGATTTGGTTGGTTGACTCCAACATTAGTTCCTTaGCTCATCTCTGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: PMSNCLGGAGKTGFGWLTPTLVP*LISADE
Trigger: TTCATCAGCAGAGATGAGTCAAGGAACTAATGTTGG...AGTCAACCAACCAAATCCAGTTTTCCCTGCTCCTCCTAAACAATTGGACATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCATGAACACAGCAGAATaGCCAAAGTTGAGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGMNTAE*PKLSAS
Trigger: ACTAGCACTCAACTTTGGTCATTCTGCTGTGTTCAT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AGATCTCTCCATCATTGTCCGCTAGGTAACTCCGAAGGACATAACCATATTTCCGTATTACTCTTCTCTTaGACCTGTAGTGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RSLHHCPLGNSEGHNHISVLLFS*TCSVEP
Trigger: TGGCTCCACACTACAGGTTCAAGAGAAGAGTAATAC...GGAAATATGGTTATGTCCTTCGGAGTTACCTAGCGGACAATGATGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACATCCTCTGTCGGGTTaGCCCCCGTGTTATATTTCG +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTHPLSG*PPCYIS
Trigger: CGAAATATAACACGGGGGGCAACCCGACAGAGGATG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCATCCTCTGTCGGGTTaGCCCCCGTGTTATATTTCG +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSHPLSG*PPCYIS
Trigger: CGAAATATAACACGGGGGGCAACCCGACAGAGGATG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTGCCACAGGTGGCTTTaGGGACCCAAACTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCCHRWL*GPKLRY
Trigger: GTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGGTGTTCCGAATCTTTaGCCTGCTCCAGTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTGVPNL*PAPVGF
Trigger: AAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGGTGTTCCGAATCTTTaGCCTGCTCCAGTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSGVPNL*PAPVGF
Trigger: AAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGTGGTCAAGCTGGCTaGTGTTCCGAATCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGGQAG*CSESLA
Trigger: GGCCAAAGATTCGGAACACCAGCCAGCTTGACCACC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAATTTTTGGAGAGACCTaGGCCTCCCCTGCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVIFGET*ASPARS
Trigger: GCTGCGAGCAGGGGAGGCCCAGGTCTCTCCAAAAAT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAAACAAGGGAGGCAATaGCTTCTGTTTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTKQGRQ*LLFRGG
Trigger: GCCACCCCGAAACAGAAGCCATTGCCTCCCTTGTTT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTAAACAAGGGAGGCAATaGCTTCTGTTTCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSKQGRQ*LLFRGG
Trigger: GCCACCCCGAAACAGAAGCCATTGCCTCCCTTGTTT...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTGGTCTGTTGGGTTTTaGTGGAGGTGGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCWSVGF*WRWTQG
Trigger: ACCTTGGGTCCACCTCCACCAAAACCCAACAGACCA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGTGAGATGCTGGCAATaGTGGTTGGCTGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVVRCWQ*WLAGRM
Trigger: CATCCGGCCAGCCAACCACCATTGCCAGCATCTCAC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCATAAATGTCATCATCTaGTGGTGGAGGGAATATCCC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGINVII*WWREYP
Trigger: GGGATATTCCCTCCACCACCAGATGATGACATTTAT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAAGGAGGAGGGATGGCTaGAAGTGTCTCAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVRRRDG*KCLRAL
Trigger: GAGTGCCCTGAGACACTTCCAGCCATCCCTCCTCCT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACTTCTTTGGGCAAGTTaGTGGGCTTGGGGCCTACAG +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVLLWAS*WAWGLQ
Trigger: CTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAGGAAAGGGCAAACTTaGAATCTCCCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTRKGQT*NLPCMV
Trigger: GACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACTGTTTCGGGGTGGCTaGATTCTTGTCTCCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTLFRGG*ILVSLF
Trigger: GAAAAGGGAGACAAGAATTCAGCCACCCCGAAACAG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTGGCAGGGAAGTTGTTaGGTAAGACGTCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCWQGSC*VRRLAF
Trigger: AAAGGCCAGACGTCTTACTCAACAACTTCCCTGCCA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATGGGACTGGTGGTTGTaGTGGGTGAGATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVWDWWL*WVRCWQ
Trigger: TTGCCAGCATCTCACCCATCACAACCACCAGTCCCA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCCTCCACTTCCACTCTaGCTGTGGCTGCTAATATCA +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCPPLPL*LWLLIS
Trigger: TGATATTAGCAGCCACAGTCAGAGTGGAAGTGGAGG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AGATCTCTCCATCATTGTCCGCTAGGTAACTCCGAAGGACATAACCATATTTCCATGAACACAGCAGAATaGCCAAAGTTGAGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: RSLHHCPLGNSEGHNHISMNTAE*PKLSAS
Trigger: ACTAGCACTCAACTTTGGTCATTCTGCTGTGTTCAT...GGAAATATGGTTATGTCCTTCGGAGTTACCTAGCGGACAATGATGGAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR TCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGAAGAGCCAGCATTATaGTGTACTCATTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGEEPAL*CTHFVL
Trigger: GAGTACAAAATGAGTACATCATAATGCTGGCTCTTC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCATCCTCTGTCGGGTTaGCCCCCGTGTTATATTTCG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNHPLSG*PPCYIS
Trigger: CGAAATATAACACGGGGGGCAACCCGACAGAGGATG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAGAAGAAGGTTTGACTaGCACAGGTGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTRRRFD*HRWLWG
Trigger: TCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTAGAAGAAGGTTTGACTaGCACAGGTGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCRRRFD*HRWLWG
Trigger: TCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTTTAGTGGATCTTCCTaGGCCAGGGTCTGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVFSGSS*ARVWAL
Trigger: TAGGGCCCAGACCCTGGCCCAGGAAGATCCACTAAA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTGCCACAGGTGGCTTTaGGGACCCAAACTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNCHRWL*GPKLRY
Trigger: GTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTTGACTGCCACAGGTaGCTTTGGGGACCCAAACTT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFDCHR*LWGPKL
Trigger: AAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGTGTTCCGAATCTTTaGCCTGCTCCAGTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGVPNL*PAPVGF
Trigger: AAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCTCTGGTGGTCAAGCTaGCTGGTGTTCCGAATCTTT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCLWWSS*LVFRIF
Trigger: AAAGATTCGGAACACCAGCCAGCTTGACCACCAGAG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTGGGGAAGAGGGGCTTaGGTTCAAGATCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCWGRGA*VQDLVM
Trigger: CATCACAAGATCTTGAACCCAAGCCCCTCTTCCCCA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTGGGGAAGAGGGGCTTaGGTTCAAGATCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSWGRGA*VQDLVM
Trigger: CATCACAAGATCTTGAACCCAAGCCCCTCTTCCCCA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGGGCTTTCGTCTTCATaGGAGTTCTCGGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTGLSSS*EFSVLR
Trigger: CCTAAGTACCGAGAACTCCCATGAAGACGAAAGCCC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTTCTTCACCATTTTTaGAGAGACCTGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFLHHF*RDLGLP
Trigger: GGGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTGGTCTGTTGGGTTTTaGTGGAGGTGGACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNWSVGF*WRWTQG
Trigger: ACCTTGGGTCCACCTCCACCAAAACCCAACAGACCA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCATTTGGTGGTCTGTTaGGTTTTGGTGGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSHLVVC*VLVEVD
Trigger: GTCCACCTCCACCAAAACCCAACAGACCACCAAATG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGTCATCATCTGGTGGTaGAGGGAATATCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTVIIWW*REYPST
Trigger: AGTGGAGGGATATTCCCTCCACCACCAGATGATGAC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCCTCAGAAGAAGGTTTaGCTGCCACAGGTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVPQKKV*LPQVAL
Trigger: CAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAGGAAAGGGCAAACTTaGAATCTCCCCTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNRKGQT*NLPCMV
Trigger: GACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTGGCAGGGAAGTTGTTaGGTAAGACGTCTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNWQGSC*VRRLAF
Trigger: AAAGGCCAGACGTCTTACTCAACAACTTCCCTGCCA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCACCATCAGAGTGCGTaGCACCATCTTGATTGTCTT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCHHQSA*HHLDCL
Trigger: AAGACAATCAAGATGGTGTCACGCACTCTGATGGTG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAATCTTCAATAGGTCTTaGAGGGGCACCAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTIFNRS*RGTKRV
Trigger: GACTCTCTTGGTGCCCCTTCAAGACCTATTGAAGAT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCCTCCACTTCCACTCTaGCTGTGGCTGCTAATATCA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNPPLPL*LWLLIS
Trigger: TGATATTAGCAGCCACAGTCAGAGTGGAAGTGGAGG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTCTAGCTGTCGCATCTaGTCTGCATGTGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSSSCRI*SACGTQ
Trigger: TTGAGTTCCACATGCAGAGCAGATGCGACAGCTAGA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGAGGGACTTTACATCTaGCTTTCCATCCTGACTCCT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTEGLYI*LSILTP
Trigger: AGGAGTCAGGATGGAAAGGCAGATGTAAAGTCCCTC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR GCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCTGCTAATATCATCCTaGTCTGCAACATCATCATAT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGLLISS*SATSSY
Trigger: ATATGATGATGTTGCAGAGCAGGATGATATTAGCAG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAACTGTCAGACTGCAATaGAAGTCTGCCCCAATGAAG +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTTVRLQ*KSAPMK
Trigger: CTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAAGAAGGCGGAAGGATaGCCTCCTTTAGTGGATCTT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTKKAEG*PPLVDL
Trigger: AAGATCCACTAAAGGAGGCCATCCTTCCGCCTTCTT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351578.12
ENST00000512982.4
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTTTGACTGCCACAGGTaGCTTTGGGGACCCAAACTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNFDCHR*LWGPKL
Trigger: AAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTTAGAAACGGGGGCTTaGGTTCCTTGTCAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSLETGA*VPCQAF
Trigger: AAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTAGAAACGGGGGCTTaGGTTCCTTGTCAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTLETGA*VPCQAF
Trigger: AAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCTCTGGTGGTCAAGCTaGCTGGTGTTCCGAATCTTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNLWWSS*LVFRIF
Trigger: AAAGATTCGGAACACCAGCCAGCTTGACCACCAGAG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATACACTGTGAAGAGATaGCTTGTTTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTYTVKR*LVSRRP
Trigger: TGGCCTCCTGGAAACAAGCCATCTCTTCACAGTGTA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTACACTGTGAAGAGATaGCTTGTTTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSYTVKR*LVSRRP
Trigger: TGGCCTCCTGGAAACAAGCCATCTCTTCACAGTGTA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTGGGGAAGAGGGGCTTaGGTTCAAGATCTTGTGATG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNWGRGA*VQDLVM
Trigger: CATCACAAGATCTTGAACCCAAGCCCCTCTTCCCCA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGGCTTTCGTCTTCATaGGAGTTCTCGGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGLSSS*EFSVLR
Trigger: CCTAAGTACCGAGAACTCCCATGAAGACGAAAGCCC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGCTTCTGTTTCGGGGTaGCTGAATTCTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNASVSG*LNSCLP
Trigger: AGGGAGACAAGAATTCAGCCACCCCGAAACAGAAGC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATCTGTTGGGTTTTGGTaGAGGTGGACCCAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSVGFW*RWTQGK
Trigger: TTTACCTTGGGTCCACCTCCACCAAAACCCAACAGA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCATTTGGTGGTCTGTTaGGTTTTGGTGGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNHLVVC*VLVEVD
Trigger: GTCCACCTCCACCAAAACCCAACAGACCACCAAATG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCAGGTCAACATTTGGTaGTCTGTTGGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCQVNIW*SVGFWW
Trigger: CCACCAAAACCCAACAGACCACCAAATGTTGACCTG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGTCATCATCTGGTGGTaGAGGGAATATCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNVIIWW*REYPST
Trigger: AGTGGAGGGATATTCCCTCCACCACCAGATGATGAC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTAATGTCATCATCTGGTaGTGGAGGGAATATCCCTCC +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCNVIIW*WREYPS
Trigger: GGAGGGATATTCCCTCCACCACCAGATGATGACATT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAATGTCATCATCTGGTaGTGGAGGGAATATCCCTCC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTNVIIW*WREYPS
Trigger: GGAGGGATATTCCCTCCACCACCAGATGATGACATT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGAGGCCAACTCTTCCTaGTTTATTTTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSEANSS*FILLWK
Trigger: CTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCACCATCAGAGTGCGTaGCACCATCTTGATTGTCTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNHHQSA*HHLDCL
Trigger: AAGACAATCAAGATGGTGTCACGCACTCTGATGGTG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACATCTTCAATAGGTCTTaGAGGGGCACCAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNIFNRS*RGTKRV
Trigger: GACTCTCTTGGTGCCCCTTCAAGACCTATTGAAGAT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCCTCCACTTCCACTCTaGCTGTGGCTGCTAATATCA +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVPPLPL*LWLLIS
Trigger: TGATATTAGCAGCCACAGTCAGAGTGGAAGTGGAGG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGTATTACTCTTCTCTTaGACCTGTAGTGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSVLLFS*TCSVEP
Trigger: TGGCTCCACACTACAGGTTCAAGAGAAGAGTAATAC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTAGAAGAAGGTTTGACTaGCACAGGTGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVRRRFD*HRWLWG
Trigger: TCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCT...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp AGATCTCTCCATCATTGTCCGCTAGGTAACTCCGAAGGACATAACCATATTTCCTCCCTTCTTCATTTCTaGAGAGAACTTTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: RSLHHCPLGNSEGHNHISSLLHF*RELLCH
Trigger: ATGACACAAAAGTTCTCTGCAGAAATGAAGAAGGGA...GGAAATATGGTTATGTCCTTCGGAGTTACCTAGCGGACAATGATGGAGAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACTCTGGTGGTCAAGCTaGCTGGTGTTCCGAATCTTT +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVLWWSS*LVFRIF
Trigger: AAAGATTCGGAACACCAGCCAGCTTGACCACCAGAG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTACACTGTGAAGAGATaGCTTGTTTCCAGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNYTVKR*LVSRRP
Trigger: TGGCCTCCTGGAAACAAGCCATCTCTTCACAGTGTA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGGGCTTTCGTCTTCATaGGAGTTCTCGGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVGLSSS*EFSVLR
Trigger: CCTAAGTACCGAGAACTCCCATGAAGACGAAAGCCC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTAAGACACATTCTTCATaGGGCTTTCGTCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCKTHSS*GFRLHG
Trigger: CCCATGAAGACGAAAGCCCCATGAAGAATGTGTCTT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAAGACACATTCTTCATaGGGCTTTCGTCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTKTHSS*GFRLHG
Trigger: CCCATGAAGACGAAAGCCCCATGAAGAATGTGTCTT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTTTCTTCACCATTTTTaGAGAGACCTGGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVFLHHF*RDLGLP
Trigger: GGGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGCTTCTGTTTCGGGGTaGCTGAATTCTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVASVSG*LNSCLP
Trigger: AGGGAGACAAGAATTCAGCCACCCCGAAACAGAAGC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTCTGTTGGGTTTTGGTaGAGGTGGACCCAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNSVGFW*RWTQGK
Trigger: TTTACCTTGGGTCCACCTCCACCAAAACCCAACAGA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCATTTGGTGGTCTGTTaGGTTTTGGTGGAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVHLVVC*VLVEVD
Trigger: GTCCACCTCCACCAAAACCCAACAGACCACCAAATG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCAGGTCAACATTTGGTaGTCTGTTGGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNQVNIW*SVGFWW
Trigger: CCACCAAAACCCAACAGACCACCAAATGTTGACCTG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCGTCAGGTCAACATTTaGTGGTCTGTTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNRQVNI*WSVGFW
Trigger: CCAAAACCCAACAGACCACCAAATGTTGACCTGACG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTCTTCTCTCTTTCTTTaGATGCTTCTATGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: GHSESLASLSRSPQTKAGSSLFL*MLLCLH
Trigger: ATGAAGACATAGAAGCATCCAAAGAAAGAGAGAAGA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACAACCATTTTCCTTCTaGGTTGTCTGTGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTQPFSF*VVCDAD
Trigger: ATCCGCATCACAGACAACCCAGAAGGAAAATGGTTG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGTCATCATCTGGTGGTaGAGGGAATATCCCTCCACT +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVVIIWW*REYPST
Trigger: AGTGGAGGGATATTCCCTCCACCACCAGATGATGAC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTAAACTTCATCTCCCATGTCCAATTGTTTAGGAGGAGCAGGGAAAACTGGATTAGGGAAAACTGGATTTaGTTGGTTGACTCTTACGAT +
Preference number: 4 (lower is better)
Translates to: VNFISHVQLFRRSRENWIRENWI*LVDSYD
Trigger: ATCGTAAGAGTCAACCAACCAAATCCAGTTTTCCCT...AATCCAGTTTTCCCTGCTCCTCCTAAACAATTGGACATGGGAGATGAAGTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATGTTATATTTCGCCATaGGGGACTTTACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTCYISP*GTLHLP
Trigger: AGGCAGATGTAAAGTCCCTCATGGCGAAATATAACA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATCTTGGTTTACACTGTaGAGAGATGGCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSWFTL*RDGLFP
Trigger: TGGAAACAAGCCATCTCTTCACAGTGTAAACCAAGA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGAGGCCAACTCTTCCTaGTTTATTTTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNEANSS*FILLWK
Trigger: CTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAATCTTCAATAGGTCTTaGAGGGGCACCAAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVIFNRS*RGTKRV
Trigger: GACTCTCTTGGTGCCCCTTCAAGACCTATTGAAGAT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTATGAACACAGCAGAATaGCCAAAGTTGAGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSMNTAE*PKLSAS
Trigger: ACTAGCACTCAACTTTGGTCATTCTGCTGTGTTCAT...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAATGAACACAGCAGAATaGCCAAAGTTGAGTGCTAGT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTMNTAE*PKLSAS
Trigger: ACTAGCACTCAACTTTGGTCATTCTGCTGTGTTCAT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR TCA 90 bp GTAAACTTCATCTCCCATGTCCAATTGTTTAGGAGGAGCAGGGAAAACTGGATTACCTTCATTATTGTCTaGGTCAGAGACTTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: VNFISHVQLFRRSRENWITFIIV*VRDFRF
Trigger: AAACCTAAAGTCTCTGACTCAGACAATAATGAAGGT...AATCCAGTTTTCCCTGCTCCTCCTAAACAATTGGACATGGGAGATGAAGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACGGATGATTTCAATTTaGTCTCCTTGCTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTRMISI*SPCLKL
Trigger: GAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTACTGTCAGACTGCAATaGAAGTCTGCCCCAATGAAG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVTVRLQ*KSAPMK
Trigger: CTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGT...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAACTGTCAGACTGCAATaGAAGTCTGCCCCAATGAAG +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVTVRLQ*KSAPMK
Trigger: CTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGAGGGACTTTACATCTaGCTTTCCATCCTACAAACA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTEGLYI*LSILQT
Trigger: TGTTTGTAGGATGGAAAGGCAGATGTAAAGTCCCTC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515010.5
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATTAGAAACGGGGGCTTaGGTTCCTTGTCAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVLETGA*VPCQAF
Trigger: AAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACAGGTCAACATTTGGTaGTCTGTTGGGTTTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVQVNIW*SVGFWW
Trigger: CCACCAAAACCCAACAGACCACCAAATGTTGACCTG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCGTCAGGTCAACATTTaGTGGTCTGTTGGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVRQVNI*WSVGFW
Trigger: CCAAAACCCAACAGACCACCAAATGTTGACCTGACG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCCAGAAGAGGTTTTGTaGAATTTCGTCAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCPEEVL*NFVRST
Trigger: TGTTGACCTGACGAAATTCCACAAAACCTCTTCTGG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACCAGAAGAGGTTTTGTaGAATTTCGTCAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTPEEVL*NFVRST
Trigger: TGTTGACCTGACGAAATTCCACAAAACCTCTTCTGG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTAATGTCATCATCTGGTaGTGGAGGGAATATCCCTCC +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVNVIIW*WREYPS
Trigger: GGAGGGATATTCCCTCCACCACCAGATGATGACATT...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAATAAATGTCATCATCTaGTGGTGGAGGGAATATCCC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTINVII*WWREYP
Trigger: GGGATATTCCCTCCACCACCAGATGATGACATTTAT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAGGAGCAGGGAAAACTaGATTTGGTTGGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNRSREN*IWLVDS
Trigger: AGAGTCAACCAACCAAATCCAGTTTTCCCTGCTCCT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTCTTGGTTTACACTGTaGAGAGATGGCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNSWFTL*RDGLFP
Trigger: TGGAAACAAGCCATCTCTTCACAGTGTAAACCAAGA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCTTGATTGTCTTCATTaGCAGGGCTTTTTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSLDCLH*QGFLGQ
Trigger: TTGACCTAAAAAGCCCTGTCAATGAAGACAATCAAG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCTTGATTGTCTTCATTaGCAGGGCTTTTTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCLDCLH*QGFLGQ
Trigger: TTGACCTAAAAAGCCCTGTCAATGAAGACAATCAAG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCCAACATTAGTTCCTTaGCTCATCTCTGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNPTLVP*LISADE
Trigger: TTCATCAGCAGAGATGAGTCAAGGAACTAATGTTGG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACAGAATGACCAAAGTTaGGTGCTAGTCATTGTCATA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTQNDQS*VLVIVI
Trigger: TATGACAATGACTAGCACTCAACTTTGGTCATTCTG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR TCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGAAGAGCCAGCATTATaGTGTACTCATTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTEEPAL*CTHFVL
Trigger: GAGTACAAAATGAGTACATCATAATGCTGGCTCTTC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCGGATGATTTCAATTTaGTCTCCTTGCTTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNRMISI*SPCLKL
Trigger: GAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTAAGACACATTCTTCATaGGGCTTTCGTCTTCATGGG +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVKTHSS*GFRLHG
Trigger: CCCATGAAGACGAAAGCCCCATGAAGAATGTGTCTT...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGAAATCTCCCCTGCATaGTCTTTATTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCEISPA*SLFSES
Trigger: AGACTCAGAAAATAAAGACCATGCAGGGGAGATTTC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGAAATCTCCCCTGCATaGTCTTTATTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTEISPA*SLFSES
Trigger: AGACTCAGAAAATAAAGACCATGCAGGGGAGATTTC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCCAGAAGAGGTTTTGTaGAATTTCGTCAGGTCAACA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNPEEVL*NFVRST
Trigger: TGTTGACCTGACGAAATTCCACAAAACCTCTTCTGG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACAACCATTTTCCTTCTaGGTTGTCTGTGATGCGGAT +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVQPFSF*VVCDAD
Trigger: ATCCGCATCACAGACAACCCAGAAGGAAAATGGTTG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACATAAATGTCATCATCTaGTGGTGGAGGGAATATCCC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNINVII*WWREYP
Trigger: GGGATATTCCCTCCACCACCAGATGATGACATTTAT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACACATGGTCATATACTaGCTAGTGCTCTCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTHMVIY*LVLSKS
Trigger: ACTTTTAGAGAGCACTAGCCAGTATATGACCATGTG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCACATGGTCATATACTaGCTAGTGCTCTCTAAAAGT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSHMVIY*LVLSKS
Trigger: ACTTTTAGAGAGCACTAGCCAGTATATGACCATGTG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGAAGATGGTGCAGCTTaGATAGTGAATGTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNEDGAA*IVNVQV
Trigger: AACTTGCACATTCACTATCCAAGCTGCACCATCTTC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646045.2
CDS-3UTR TCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTGTTATATTTCGCCATaGGGGACTTTACATCTGCCT +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVCYISP*GTLHLP
Trigger: AGGCAGATGTAAAGTCCCTCATGGCGAAATATAACA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATCTTGGTTTACACTGTaGAGAGATGGCTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVSWFTL*RDGLFP
Trigger: TGGAAACAAGCCATCTCTTCACAGTGTAAACCAAGA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCTTGATTGTCTTCATTaGCAGGGCTTTTTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNLDCLH*QGFLGQ
Trigger: TTGACCTAAAAAGCCCTGTCAATGAAGACAATCAAG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR TCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCCAACATTAGTTCCTTaGCTCATCTCTGCTGATGAA +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVPTLVP*LISADE
Trigger: TTCATCAGCAGAGATGAGTCAAGGAACTAATGTTGG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCAGAATGACCAAAGTTaGGTGCTAGTCATTGTCATA +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNQNDQS*VLVIVI
Trigger: TATGACAATGACTAGCACTCAACTTTGGTCATTCTG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGAAGAGCCAGCATTATaGTGTACTCATTTTGTACTC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNEEPAL*CTHFVL
Trigger: GAGTACAAAATGAGTACATCATAATGCTGGCTCTTC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTGTGTGTCTGTTTCTTaGTGTGTAAACCAAAACTCT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCCVSVS*CVNQNS
Trigger: AGAGTTTTGGTTTACACATCAAGAAACAGACACACA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTGTGTGTCTGTTTCTTaGTGTGTAAACCAAAACTCT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSCVSVS*CVNQNS
Trigger: AGAGTTTTGGTTTACACATCAAGAAACAGACACACA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTACCTTCATTATTGTCTaGGTCAGAGACTTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCTFIIV*VRDFRF
Trigger: AAACCTAAAGTCTCTGACTCAGACAATAATGAAGGT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCTGCTAATATCATCCTaGTCTGCAACATCATCATAT +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCLLISS*SATSSY
Trigger: ATATGATGATGTTGCAGAGCAGGATGATATTAGCAG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCTGCTAATATCATCCTaGTCTGCAACATCATCATAT +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSLLISS*SATSSY
Trigger: ATATGATGATGTTGCAGAGCAGGATGATATTAGCAG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATCCCTTCTTCATTTCTaGAGAGAACTTTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSLLHF*RELLCH
Trigger: ATGACACAAAAGTTCTCTGCAGAAATGAAGAAGGGA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAACTCCAATGGGCCTTTaGAATATTAAAATGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTTPMGL*NIKMWR
Trigger: TCTCCACATTTTAATATTGCAAAGGCCCATTGGAGT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACTTGATTGTCTTCATTaGCAGGGCTTTTTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVLDCLH*QGFLGQ
Trigger: TTGACCTAAAAAGCCCTGTCAATGAAGACAATCAAG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTCAGAATGACCAAAGTTaGGTGCTAGTCATTGTCATA +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVQNDQS*VLVIVI
Trigger: TATGACAATGACTAGCACTCAACTTTGGTCATTCTG...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR TCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACCTTCATTATTGTCTaGGTCAGAGACTTTAGGTTT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNTFIIV*VRDFRF
Trigger: AAACCTAAAGTCTCTGACTCAGACAATAATGAAGGT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000512982.4
ENST00000646045.2
ENST00000646444.1
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAATTTGGGAAACGCTTaGTTCTGTTCATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNNLGNA*FCSFSE
Trigger: CTCAGAAAATGAACAGAAGCAAGCGTTTCCCAAATT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAATCACAACAAGCTTTTaGAAGATGGATGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTITTSF*KMDDLN
Trigger: ATTCAAGTCATCCATCTTGCAAAAGCTTGTTGTGAT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTAATATCATCCTGCTCTaGAACATCATCATATACTTC +
Preference number: 4 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSNIILL*NIIIYF
Trigger: GAAGTATATGATGATGTTGCAGAGCAGGATGATATT...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCTGCTAATATCATCCTaGTCTGCAACATCATCATAT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNLLISS*SATSSY
Trigger: ATATGATGATGTTGCAGAGCAGGATGATATTAGCAG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTCCCTTCTTCATTTCTaGAGAGAACTTTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNSLLHF*RELLCH
Trigger: ATGACACAAAAGTTCTCTGCAGAAATGAAGAAGGGA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGAAATCTCCCCTGCATaGTCTTTATTTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVEISPA*SLFSES
Trigger: AGACTCAGAAAATAAAGACCATGCAGGGGAGATTTC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATCTTCTCTCTTTCTTTaGATGCTTCTATGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSSLFL*MLLCLH
Trigger: ATGAAGACATAGAAGCATCCAAAGAAAGAGAGAAGA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CCA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTAGGATTATTTACTGGTaGTCTAAAAGAAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCRIIYW*SKRSTF
Trigger: GAAGGTACTTCTTTTAGACCACCAGTAAATAATCCT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAGGAGGATTATTTACTaGTGGTCTAAAAGAAGTACC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNRRIIY*WSKRST
Trigger: GGTACTTCTTTTAGACCACCAGTAAATAATCCTCCT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAAAACTGGATTTGGTTaGTTGACTCTTACGATGAAC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNKTGFG*LTLTMN
Trigger: GTTCATCGTAAGAGTCAACCAACCAAATCCAGTTTT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR TCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTGTGTGTCTGTTTCTTaGTGTGTAAACCAAAACTCT +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVCVSVS*CVNQNS
Trigger: AGAGTTTTGGTTTACACATCAAGAAACAGACACACA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAAATTTGGGAAACGCTTaGTTCTGTTCATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVNLGNA*FCSFSE
Trigger: CTCAGAAAATGAACAGAAGCAAGCGTTTCCCAAATT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACATCACAACAAGCTTTTaGAAGATGGATGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNITTSF*KMDDLN
Trigger: ATTCAAGTCATCCATCTTGCAAAAGCTTGTTGTGAT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACAATATCATCCTGCTCTaGAACATCATCATATACTTC +
Preference number: 4 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNNIILL*NIIIYF
Trigger: GAAGTATATGATGATGTTGCAGAGCAGGATGATATT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR GCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTCCCTTCTTCATTTCTaGAGAGAACTTTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVSLLHF*RELLCH
Trigger: ATGACACAAAAGTTCTCTGCAGAAATGAAGAAGGGA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATCCCTTCTTCATTTCTaGAGAGAACTTTTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVSLLHF*RELLCH
Trigger: ATGACACAAAAGTTCTCTGCAGAAATGAAGAAGGGA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAAGGAGGATTATTTACTaGTGGTCTAAAAGAAGTACC +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVRRIIY*WSKRST
Trigger: GGTACTTCTTTTAGACCACCAGTAAATAATCCTCCT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAATTATTTCAATTCTGTaGAGCCACTTCAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVIISIL*SHFRNS
Trigger: GGAGTTTCTGAAGTGGCTCCACAGAATTGAAATAAT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR GCA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTATCACAACAAGCTTTTaGAAGATGGATGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVITTSF*KMDDLN
Trigger: ATTCAAGTCATCCATCTTGCAAAAGCTTGTTGTGAT...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CCA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAAGGATTATTTACTGGTaGTCTAAAAGAAGTACCTTC +
Preference number: 4 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVRIIYW*SKRSTF
Trigger: GAAGGTACTTCTTTTAGACCACCAGTAAATAATCCT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS CCA 90 bp GCCTCGGGGTCTCTGGTGGTCAAGCTGGCTGGTGTTCCGAATCTTTaGCCTGCTCCAGTGGGCTTTAGAAACGGGGGCTTGGGTTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASGSLVVKLAGVPNL*PAPVGFRNGGLGSL
Trigger: CAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp GGCGGAAGGATGGCCTCCTTTAGTGGATCTTCCTGGGCCAGGGTCTaGGCCCTACTCACTTCTAGCTGTCGCATCTGCTCTGCATGTGGA +
Preference number: 5 (lower is better)
Translates to: GGRMASFSGSSWARV*ALLTSSCRICSACG
Trigger: TCCACATGCAGAGCAGATGCGACAGCTAGAAGTGAGTAGGGCCCAGACCCTGGCCCAGGAAGATCCACTAAAGGAGGCCATCCTTCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000504542.1
ENST00000506557.5
ENST00000509072.5
ENST00000512982.4
CDS CCA 90 bp CCTGCAGAAGAAGGCGGAAGGATGGCCTCCTTTAGTGGATCTTCCTaGGCCAGGGTCTGGGCCCTACTCACTTCTAGCTGTCGCATCTGC +
Preference number: 5 (lower is better)
Translates to: PAEEGGRMASFSGSS*ARVWALLTSSCRIC
Trigger: GCAGATGCGACAGCTAGAAGTGAGTAGGGCCCAGACCCTGGCCCAGGAAGATCCACTAAAGGAGGCCATCCTTCCGCCTTCTTCTGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000504542.1
ENST00000506557.5
ENST00000509072.5
ENST00000512982.4
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTGGCCAAAGGCGGGTTaGGGGAAGAGGGGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGWPKAG*GKRGLG
Trigger: ACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCCA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS CCA 90 bp GGCCTACAGGTTTCAGAAATCCCACTTTCGCCTCGGGGTCTCTGGTaGTCAAGCTGGCTGGTGTTCCGAATCTTTGGCCTGCTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: GLQVSEIPLSPRGLW*SSWLVFRIFGLLQW
Trigger: CCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGATTTCTGAAACCTGTAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp TGGGGCCTACAGGTTTCAGAAATCCCACTTTCGCCTCGGGGTCTCTaGTGGTCAAGCTGGCTGGTGTTCCGAATCTTTGGCCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WGLQVSEIPLSPRGL*WSSWLVFRIFGLLQ
Trigger: CTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGATTTCTGAAACCTGTAGGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS TCA 90 bp CTATCCTGGGACGGAAGGGCGGGCGAGATCTTATCACCTCTGGGGTaGTCTCTGGAAACTTCTGGTGTGAGCTTCATGCTGCGAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LSWDGRAGEILSPLG*SLETSGVSFMLRVL
Trigger: CAGCACTCGCAGCATGAAGCTCACACCAGAAGTTTCCAGAGATCACCCCAGAGGTGATAAGATCTCGCCCGCCCTTCCGTCCCAGGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512138.1
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGTGGTCTGTTGGGTTTaGGTGGAGGTGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGVVCWV*VEVDPR
Trigger: CCTTGGGTCCACCTCCACCAAAACCCAACAGACCAC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS CCA 90 bp TGGTGGTCAAGCTGGCTGGTGTTCCGAATCTTTGGCCTGCTCCAGTaGGCTTTAGAAACGGGGGCTTGGGTTCCTTGTCAGGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: WWSSWLVFRIFGLLQ*ALETGAWVPCQAFP
Trigger: AGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGGGGGCTTGGGTTCCTaGTCAGGCTTTTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGGGLGS*SGFSSE
Trigger: TTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGGCAAGTTGATGGGCTaGGGGCCTACAGGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGGKLMG*GPTGFR
Trigger: TCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTTTAAAGGGCCGCTTTaGGACCTGACTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGFKGPL*DLTPRG
Trigger: TCCCCTGGGAGTCAGGTCCAAAAGCGGCCCTTTAAA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGTGGTGGCAGGGAAGTaGTTGAGTAAGACGTCTGGC +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGVVAGK*LSKTSG
Trigger: GCCAGACGTCTTACTCAACAACTTCCCTGCCACCAC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS CCA 90 bp GTCAGGCTTTTCCTCAGAAGAAGGTTTGACTGCCACAGGTGGCTTTaGGGACCCAAACTTAGGTACATTGCTGGGTCCTGCAGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: VRLFLRRRFDCHRWL*GPKLRYIAGSCRRA
Trigger: AGCCCTCCTGCAGGACCCAGCAATGTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp GTTTCAGAAATCCCACTTTCGCCTCGGGGTCTCTGGTGGTCAAGCTaGCTGGTGTTCCGAATCTTTGGCCTGCTCCAGTGGGCTTTAGAA +
Preference number: 5 (lower is better)
Translates to: VSEIPLSPRGLWWSS*LVFRIFGLLQWALE
Trigger: TTCTAAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGATTTCTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCCTGAAGGGTCGGCTATaGACTGAGACATCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGLKGRL*TETSSV
Trigger: GACAGAGGATGTCTCAGTCAATAGCCGACCCTTCAG...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS GCA 90 bp GGGCTTGGGTTCCTTGTCAGGCTTTTCCTCAGAAGAAGGTTTGACTaGCACAGGTGGCTTTGGGGACCCAAACTTAGGTACATTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GLGFLVRLFLRRRFD*HRWLWGPKLRYIAG
Trigger: CCCAGCAATGTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp GGCGGGCGAGATCTTATCACCTCTGGGGTGATCTCTGGAAACTTCTaGTGTGAGCTTCATGCTGCGAGTGCTGGGAAGTGGCTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: GGRDLITSGVISGNF*CELHAASAGKWLEK
Trigger: TTTTTCTAGCCACTTCCCAGCACTCGCAGCATGAAGCTCACACCAGAAGTTTCCAGAGATCACCCCAGAGGTGATAAGATCTCGCCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512138.1
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTTTTCTTCACCATTTTaGGAGAGACCTGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGFSSPF*ERPGPP
Trigger: GGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAAA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS GCA 90 bp CTGCTGAGGATACCTTCCAAAGGCTCTGCTTTCCCTGACAACTTGTaGCAGCAAGTGGAAGCCACCGTTTATAGAGGCCCCATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: LLRIPSKGSAFPDNL*QQVEATVYRGPILA
Trigger: AGCAAGAATGGGGCCTCTATAAACGGTGGCTTCCACTTGCTGGCACAAGTTGTCAGGGAAAGCAGAGCCTTTGGAAGGTATCCTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS CCA 90 bp TTCCTTGTCAGGCTTTTCCTCAGAAGAAGGTTTGACTGCCACAGGTaGCTTTGGGGACCCAAACTTAGGTACATTGCTGGGTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FLVRLFLRRRFDCHR*LWGPKLRYIAGSCR
Trigger: CCTGCAGGACCCAGCAATGTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCGTGCGTGACACCATCTaGATTGTCTTCATTGACAGG +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGVRDTI*IVFIDR
Trigger: CCTGTCAATGAAGACAATCAAGATGGTGTCACGCAC...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCATCTCCCATGTCCAATaGTTTAGGAGGAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGISHVQ*FRRSRE
Trigger: TTCCCTGCTCCTCCTAAACAATTGGACATGGGAGAT...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS CCA 90 bp GCCACTCTCTTTTCCCAGGCACGCTTCTCTTTCCAAAGCACTTCATaGCTTCAGCTGCTCTGGGCTCTCACTTGTCCATTCATTCATGGA +
Preference number: 5 (lower is better)
Translates to: ATLFSQARFSFQSTS*LQLLWALTCPFIHG
Trigger: TCCATGAATGAATGGACAAGTGAGAGCCCAGAGCAGCTGAAGCCATGAAGTGCTTTGGAAAGAGAAGCGTGCCTGGGAAAAGAGAGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504542.1
ENST00000506557.5
ENST00000509072.5
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGTGGTCTGTTGGGTTTaGGTGGAGGTGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGVVCWV*VEVDPR
Trigger: CCTTGGGTCCACCTCCACCAAAACCCAACAGACCAC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS TCA 90 bp GCCTTAGGGAACCTGGCAGGAGGAGTCCCTGAGGCCAACTCTTCCTaGTTTATTTTGCTCTGGAAGGTGTTCTTAGCAGCATCTATCTTC +
Preference number: 5 (lower is better)
Translates to: ALGNLAGGVPEANSS*FILLWKVFLAASIF
Trigger: GAAGATAGATGCTGCTAAGAACACCTTCCAGAGCAAAATAAATCAGGAAGAGTTGGCCTCAGGGACTCCTCCTGCCAGGTTCCCTAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp ATTGAGCAAGCACAGGAGTCATCGTCTCAACTCCTGTCTTCTCACTaGGGGCTGACAAAAGGCAGGTATCCTCTCCGTAATAAGAGAAGG +
Preference number: 5 (lower is better)
Translates to: IEQAQESSSQLLSSH*GLTKGRYPLRNKRR
Trigger: CCTTCTCTTATTACGGAGAGGATACCTGCCTTTTGTCAGCCCCCAGTGAGAAGACAGGAGTTGAGACGATGACTCCTGTGCTTGCTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTGGTGTTCCGAATCTTaGGCCTGCTCCAGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGWCSES*ACSSGL
Trigger: AAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTTTCCAGAAGAGGTTTaGTGGAATTTCGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGFPEEV*WNFVRS
Trigger: TGACCTGACGAAATTCCACAAAACCTCTTCTGGAAA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTTCTGGGAGGTAGGCTaGGGACTGGTGGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGFWEVG*GLVVVM
Trigger: CATCACAACCACCAGTCCCAAGCCTACCTCCCAGAA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS TCA 90 bp AAGCACAGGAGTCATCGTCTCAACTCCTGTCTTCTCACTGGGGGCTaGCAAAAGGCAGGTATCCTCTCCGTAATAAGAGAAGGAATAACC +
Preference number: 5 (lower is better)
Translates to: KHRSHRLNSCLLTGG*QKAGILSVIREGIT
Trigger: GGTTATTCCTTCTCTTATTACGGAGAGGATACCTGCCTTTTGTCAGCCCCCAGTGAGAAGACAGGAGTTGAGACGATGACTCCTGTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS TCA 90 bp GCGAGATCTTATCACCTCTGGGGTGATCTCTGGAAACTTCTGGTGTaGGCTTCATGCTGCGAGTGCTGGGAAGTGGCTAGAAAAACATTT +
Preference number: 5 (lower is better)
Translates to: ARSYHLWGDLWKLLV*ASCCECWEVARKTF
Trigger: AAATGTTTTTCTAGCCACTTCCCAGCACTCGCAGCATGAAGCTCACACCAGAAGTTTCCAGAGATCACCCCAGAGGTGATAAGATCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512138.1
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATGGCCAAAGGCGGGTTaGGGGAAGAGGGGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTWPKAG*GKRGLG
Trigger: ACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCCA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTGGCCAAAGGCGGGTTaGGGGAAGAGGGGCTTGGGT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCWPKAG*GKRGLG
Trigger: ACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCCA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATGCTGGCAATGGTGGTaGGCTGGCCGGATGGGATGG +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTCWQWW*AGRMGW
Trigger: CCATCCCATCCGGCCAGCCAACCACCATTGCCAGCA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp GTTTCCAGAAGAGGTTTTGTGGAATTTCGTCAGGTCAACATTTGGTaGTCTGTTGGGTTTTGGTGGAGGTGGACCCAAGGTAAACAAGGG +
Preference number: 5 (lower is better)
Translates to: VSRRGFVEFRQVNIW*SVGFWWRWTQGKQG
Trigger: CCCTTGTTTACCTTGGGTCCACCTCCACCAAAACCCAACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTTTTCTTCACCATTTTaGGAGAGACCTGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGFSSPF*ERPGPP
Trigger: GGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAAA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp TACTGTCAGACTGCAATGCAAGTCTGCCCCAATGAAGGCAGGAGGAGGGATGGCTTCTTCTCTCTTTCTTaGGATGCTTCTATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: YCQTAMQVCPNEGRRRDGFFSLS*DASMSS
Trigger: TGAAGACATAGAAGCATCCAAAGAAAGAGAGAAGAA...GCCATCCCTCCTCCTGCCTTCATTGGGGCAGACTTGCATTGCAGTCTGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCAGCCATATGAACCCCTaGCTGTTCTGCCCAACCATT +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGSHMNP*LFCPTI
Trigger: AATGGTTGGGCAGAACAGCAAGGGGTTCATATGGCT...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS TCA 90 bp GTACATTGCTGGGTCCTGCAGGAGGGCTGGCATTTCCTTGGTTGTTaGATAAGTTCTTTCTTGCTTGTATTCCTGAAGATGAGTTTGGCC +
Preference number: 5 (lower is better)
Translates to: VHCWVLQEGWHFLGC*ISSFLLVFLKMSLA
Trigger: GGCCAAACTCATCTTCAGGAATACAAGCAAGAAAGAACTTATTCAACAACCAAGGAAATGCCAGCCCTCCTGCAGGACCCAGCAATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351578.12
ENST00000506557.5
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp GAGTTGATATGCCTGGCACACAATGACCCCGAAGATGGTGCAGCTTaGATAGTGAATGTGCAAGTTAGCTATGCAGAGTGTACTTCCTTT +
Preference number: 5 (lower is better)
Translates to: ELICLAHNDPEDGAA*IVNVQVSYAECTSF
Trigger: AAAGGAAGTACACTCTGCATAGCTAACTTGCACATTCACTATCCAAGCTGCACCATCTTCGGGGTCATTGTGTGCCAGGCATATCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCGGTTTGGAATCTTCTTaGGGCAAGTTGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGGLESS*GKLMGL
Trigger: CAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACC...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGTGGTCTGTTGGGTTTaGGTGGAGGTGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCVVCWV*VEVDPR
Trigger: CCTTGGGTCCACCTCCACCAAAACCCAACAGACCAC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGTGGTCTGTTGGGTTTaGGTGGAGGTGGACCCAAGG +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTVVCWV*VEVDPR
Trigger: CCTTGGGTCCACCTCCACCAAAACCCAACAGACCAC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTGCTGGCAATGGTGGTaGGCTGGCCGGATGGGATGG +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVCWQWW*AGRMGW
Trigger: CCATCCCATCCGGCCAGCCAACCACCATTGCCAGCA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS TCA 90 bp TCTGCCCAAGGATACACTAAGAGTAAGAAATCAGATTTCTGTCTCTaGTTCCCTGACTGTGGTTTATCTCAGAGGCATGTCTCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: SAQGYTKSKKSDFCL*FPDCGLSQRHVSGL
Trigger: GAGGCCAGAGACATGCCTCTGAGATAAACCACAGTCAGGGAATCAGAGACAGAAATCTGATTTCTTACTCTTAGTGTATCCTTGGGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS CCA 90 bp ACTGTTTCCAGAAGAGGTTTTGTGGAATTTCGTCAGGTCAACATTTaGTGGTCTGTTGGGTTTTGGTGGAGGTGGACCCAAGGTAAACAA +
Preference number: 5 (lower is better)
Translates to: TVSRRGFVEFRQVNI*WSVGFWWRWTQGKQ
Trigger: TTGTTTACCTTGGGTCCACCTCCACCAAAACCCAACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCTGGAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACCAAACTTAGGTACATaGCTGGGTCCTGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTPNLGT*LGPAGG
Trigger: CCCTCCTGCAGGACCCAGCAATGTACCTAAGTTTGG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTGGTGTTCCGAATCTTaGGCCTGCTCCAGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSWCSES*ACSSGL
Trigger: AAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTGGTGTTCCGAATCTTaGGCCTGCTCCAGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCWCSES*ACSSGL
Trigger: AAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGGCAAGTTGATGGGCTaGGGGCCTACAGGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTGKLMG*GPTGFR
Trigger: TCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGGCAAGTTGATGGGCTaGGGGCCTACAGGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSGKLMG*GPTGFR
Trigger: TCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCTTAACCCCAGTCAATTaGGGAAACGCTTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGLTPVN*GNACFC
Trigger: ACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAA...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTTTAAAGGGCCGCTTTaGGACCTGACTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSFKGPL*DLTPRG
Trigger: TCCCCTGGGAGTCAGGTCCAAAAGCGGCCCTTTAAA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGTGGTGGCAGGGAAGTaGTTGAGTAAGACGTCTGGC +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTVVAGK*LSKTSG
Trigger: GCCAGACGTCTTACTCAACAACTTCCCTGCCACCAC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGTGGTGGCAGGGAAGTaGTTGAGTAAGACGTCTGGC +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSVVAGK*LSKTSG
Trigger: GCCAGACGTCTTACTCAACAACTTCCCTGCCACCAC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTCTGGGAGGTAGGCTaGGGACTGGTGGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFWEVG*GLVVVM
Trigger: CATCACAACCACCAGTCCCAAGCCTACCTCCCAGAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GGGCACTCTGAAAGTTTAGCAAGCTTATCAAGGAGTCCTCAAACTAAAGCTGGCCATTTTCCTTCTGGGTaGTCTGTGATGCGGATGATT +
Preference number: 5 (lower is better)
Translates to: GHSESLASLSRSPQTKAGHFPSG*SVMRMI
Trigger: AATCATCCGCATCACAGACAACCCAGAAGGAAAATG...GCCAGCTTTAGTTTGAGGACTCCTTGATAAGCTTGCTAAACTTTCAGAGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS TCA 90 bp TCCTCATCTAGATTTCCAGCACCATCAGAGTGCGTGACACCATCTTaGTTGTCTTCATTGACAGGGCTTTTTAGGTCAAACGGAGGTTTA +
Preference number: 5 (lower is better)
Translates to: SSSRFPAPSECVTPS*LSSLTGLFRSNGGL
Trigger: TAAACCTCCGTTTGACCTAAAAAGCCCTGTCAATGAAGACAATCAAGATGGTGTCACGCACTCTGATGGTGCTGGAAATCTAGATGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS GCA 90 bp GCTGACATAAATTTCCCTTTAACCCCAGTCAATTTGGGAAACGCTTaGTTCTGTTCATTTTCTGAGGTTGGAGGAGTAGGCCCAGATTTC +
Preference number: 5 (lower is better)
Translates to: ADINFPLTPVNLGNA*FCSFSEVGGVGPDF
Trigger: GAAATCTGGGCCTACTCCTCCAACCTCAGAAAATGAACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAAAGGGAAATTTATGTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACTGAAGGGTCGGCTATaGACTGAGACATCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTLKGRL*TETSSV
Trigger: GACAGAGGATGTCTCAGTCAATAGCCGACCCTTCAG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCCAAACTTAGGTACATaGCTGGGTCCTGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNPNLGT*LGPAGG
Trigger: CCCTCCTGCAGGACCCAGCAATGTACCTAAGTTTGG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGGGGCTTGGGTTCCTaGTCAGGCTTTTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGGLGS*SGFSSE
Trigger: TTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTGGTGTTCCGAATCTTaGGCCTGCTCCAGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNWCSES*ACSSGL
Trigger: AAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGCAAGTTGATGGGCTaGGGGCCTACAGGTTTCAGA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGKLMG*GPTGFR
Trigger: TCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTCTTCTTTGGGCAAGTaGATGGGCTTGGGGCCTACA +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCSSLGK*MGLGPT
Trigger: TGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATCTTCTTTGGGCAAGTaGATGGGCTTGGGGCCTACA +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSSLGK*MGLGPT
Trigger: TGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTTTAAAGGGCCGCTTTaGGACCTGACTCCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNFKGPL*DLTPRG
Trigger: TCCCCTGGGAGTCAGGTCCAAAAGCGGCCCTTTAAA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGTGGCAGGGAAGTTGTaGAGTAAGACGTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCVAGKL*SKTSGL
Trigger: AAGGCCAGACGTCTTACTCAACAACTTCCCTGCCAC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTGTGGCAGGGAAGTTGTaGAGTAAGACGTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSVAGKL*SKTSGL
Trigger: AAGGCCAGACGTCTTACTCAACAACTTCCCTGCCAC...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS GCA 90 bp CCTTCTGGGTTGTCTGTGATGCGGATGATTTCAATTTGCTCTCCTTaGTTGAAGCTCAGTTCATTCTTTCCTCCTTTGACATCACAACAA +
Preference number: 5 (lower is better)
Translates to: PSGLSVMRMISICSP*LKLSSFFPPLTSQQ
Trigger: TTGTTGTGATGTCAAAGGAGGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCTGAAGGGTCGGCTATaGACTGAGACATCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNLKGRL*TETSSV
Trigger: GACAGAGGATGTCTCAGTCAATAGCCGACCCTTCAG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGGGGGCTTGGGTTCCTaGTCAGGCTTTTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVGGLGS*SGFSSE
Trigger: TTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGGGGGCTTGGGTTCCTaGTCAGGCTTTTCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVGGLGS*SGFSSE
Trigger: TTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTTTAGAAACGGGGGCTaGGGTTCCTTGTCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCFRNGG*GSLSGF
Trigger: AAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTTAGAAACGGGGGCTaGGGTTCCTTGTCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFRNGG*GSLSGF
Trigger: AAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCAGGAAAGGGCAAACTaGAAATCTCCCCTGCATGGT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCQERAN*KSPLHG
Trigger: ACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCTG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTTTTCTTCACCATTTTaGGAGAGACCTGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCFSSPF*ERPGPP
Trigger: GGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAAA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTTTCTTCACCATTTTaGGAGAGACCTGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFSSPF*ERPGPP
Trigger: GGGAGGCCCAGGTCTCTCCAAAAATGGTGAAGAAAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAACATTTGGTGGTCTGTaGGGTTTTGGTGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTTFGGL*GFGGGG
Trigger: TCCACCTCCACCAAAACCCAACAGACCACCAAATGT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTACATTTGGTGGTCTGTaGGGTTTTGGTGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCTFGGL*GFGGGG
Trigger: TCCACCTCCACCAAAACCCAACAGACCACCAAATGT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGTGGCAGGGAAGTTGTaGAGTAAGACGTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNVAGKL*SKTSGL
Trigger: AAGGCCAGACGTCTTACTCAACAACTTCCCTGCCAC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGTGGTGGCAGGGAAGTaGTTGAGTAAGACGTCTGGC +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVVVAGK*LSKTSG
Trigger: GCCAGACGTCTTACTCAACAACTTCCCTGCCACCAC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTTCTGGGAGGTAGGCTaGGGACTGGTGGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVFWEVG*GLVVVM
Trigger: CATCACAACCACCAGTCCCAAGCCTACCTCCCAGAA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATTCTGGGAGGTAGGCTaGGGACTGGTGGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVFWEVG*GLVVVM
Trigger: CATCACAACCACCAGTCCCAAGCCTACCTCCCAGAA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTAGCCATATGAACCCCTaGCTGTTCTGCCCAACCATT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCSHMNP*LFCPTI
Trigger: AATGGTTGGGCAGAACAGCAAGGGGTTCATATGGCT...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAAGCCATATGAACCCCTaGCTGTTCTGCCCAACCATT +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTSHMNP*LFCPTI
Trigger: AATGGTTGGGCAGAACAGCAAGGGGTTCATATGGCT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCATGTCCAATTGTTTAGGAGGAGCAGGGAAAACTGGATTTGGTTGGTTGACTTTCTGCAGAGAACTTTaGTGTCATCTGTGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: PMSNCLGGAGKTGFGWLTFCREL*CHLWFV
Trigger: TACAAACCACAGATGACACAAAAGTTCTCTGCAGAA...AGTCAACCAACCAAATCCAGTTTTCCCTGCTCCTCCTAAACAATTGGACATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS GCA 90 bp AACCATTTTCCTTCTGGGTTGTCTGTGATGCGGATGATTTCAATTTaGTCTCCTTGCTTGAAGCTCAGTTCATTCTTTCCTCCTTTGACA +
Preference number: 5 (lower is better)
Translates to: NHFPSGLSVMRMISI*SPCLKLSSFFPPLT
Trigger: TGTCAAAGGAGGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGGAAAATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 90 bp TGGCTGCTAATATCATCCTGCTCTGCAACATCATCATATACTTCTTaGTCATCTTCAATAGGTCTTGAAGGGGCACCAAGAGAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: WLLISSCSATSSYTS*SSSIGLEGAPRESF
Trigger: AAAAGACTCTCTTGGTGCCCCTTCAAGACCTATTGAAGATGACCAAGAAGTATATGATGATGTTGCAGAGCAGGATGATATTAGCAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACTGAAGGGTCGGCTATaGACTGAGACATCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVLKGRL*TETSSV
Trigger: GACAGAGGATGTCTCAGTCAATAGCCGACCCTTCAG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTTTAGAAACGGGGGCTaGGGTTCCTTGTCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNFRNGG*GSLSGF
Trigger: AAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATCTTCTTTGGGCAAGTaGATGGGCTTGGGGCCTACA +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVSSLGK*MGLGPT
Trigger: TGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAGAGCTGGGGACCCTTTaGATGAAGACACATTCTTCA +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTELGTL*MKTHSS
Trigger: TGAAGAATGTGTCTTCATCAAAAGGGTCCCCAGCTC...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCAGGAAAGGGCAAACTaGAAATCTCCCCTGCATGGT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNQERAN*KSPLHG
Trigger: ACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCTG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTTGGTGGTCTGTaGGGTTTTGGTGGAGGTGGA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNTFGGL*GFGGGG
Trigger: TCCACCTCCACCAAAACCCAACAGACCACCAAATGT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGTGGCAGGGAAGTTGTaGAGTAAGACGTCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVVAGKL*SKTSGL
Trigger: AAGGCCAGACGTCTTACTCAACAACTTCCCTGCCAC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGTGCGTGACACCATCTaGATTGTCTTCATTGACAGG +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCVRDTI*IVFIDR
Trigger: CCTGTCAATGAAGACAATCAAGATGGTGTCACGCAC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACAATCTCCCATGTCCAATaGTTTAGGAGGAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTISHVQ*FRRSRE
Trigger: TTCCCTGCTCCTCCTAAACAATTGGACATGGGAGAT...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR CAA 90 bp GTAAACTTCATCTCCCATGTCCAATTGTTTAGGAGGAGCAGGGAAAACTGGATTACTGGATTTGGTTGGTaGACTCTTACGATGAACCTT +
Preference number: 5 (lower is better)
Translates to: VNFISHVQLFRRSRENWITGFGW*TLTMNL
Trigger: AAGGTTCATCGTAAGAGTCAACCAACCAAATCCAGT...AATCCAGTTTTCCCTGCTCCTCCTAAACAATTGGACATGGGAGATGAAGTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR CAA 90 bp CATCATAGATCTCTCCATCATTGTCCGCTAGGTAACTCCGAAGGACATAACCATGAAAACTGGATTTGGTaGGTTGACTCTTACGATGAA +
Preference number: 5 (lower is better)
Translates to: HHRSLHHCPLGNSEGHNHENWIW*VDSYDE
Trigger: TTCATCGTAAGAGTCAACCAACCAAATCCAGTTTTC...ATGGTTATGTCCTTCGGAGTTACCTAGCGGACAATGATGGAGAGATCTATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGGTTTGGAATCTTCTTaGGGCAAGTTGATGGGCTTG +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNGLESS*GKLMGL
Trigger: CAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCAGGGAAATGTAGGTTaGGAATCTTCTTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCQGNVG*ESSLGK
Trigger: CTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACAGGGAAATGTAGGTTaGGAATCTTCTTTGGGCAAG +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTQGNVG*ESSLGK
Trigger: CTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTTAACCCCAGTCAATTaGGGAAACGCTTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCLTPVN*GNACFC
Trigger: ACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTAACCCCAGTCAATTaGGGAAACGCTTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTLTPVN*GNACFC
Trigger: ACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGAGCTGGGGACCCTTTaGATGAAGACACATTCTTCA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNELGTL*MKTHSS
Trigger: TGAAGAATGTGTCTTCATCAAAAGGGTCCCCAGCTC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTACAGGAAAGGGCAAACTaGAAATCTCCCCTGCATGGT +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVQERAN*KSPLHG
Trigger: ACCATGCAGGGGAGATTTCAAGTTTGCCCTTTCCTG...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTCGTCAGGTCAACATTaGGTGGTCTGTTGGGTTTTG +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNSSGQH*VVCWVL
Trigger: CAAAACCCAACAGACCACCAAATGTTGACCTGACGA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGTGCGTGACACCATCTaGATTGTCTTCATTGACAGG +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNVRDTI*IVFIDR
Trigger: CCTGTCAATGAAGACAATCAAGATGGTGTCACGCAC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTCATTTTCCTTCTGGGTaGTCTGTGATGCGGATGATT +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSHFPSG*SVMRMI
Trigger: AATCATCCGCATCACAGACAACCCAGAAGGAAAATG...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACATTTTCCTTCTGGGTaGTCTGTGATGCGGATGATT +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTHFPSG*SVMRMI
Trigger: AATCATCCGCATCACAGACAACCCAGAAGGAAAATG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAAGCCATATGAACCCCTaGCTGTTCTGCCCAACCATT +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVSHMNP*LFCPTI
Trigger: AATGGTTGGGCAGAACAGCAAGGGGTTCATATGGCT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACATCTCCCATGTCCAATaGTTTAGGAGGAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNISHVQ*FRRSRE
Trigger: TTCCCTGCTCCTCCTAAACAATTGGACATGGGAGAT...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGAGCTGGGGACCCTTTaGATGAAGACACATTCTTCA +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVELGTL*MKTHSS
Trigger: TGAAGAATGTGTCTTCATCAAAAGGGTCCCCAGCTC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTTTCCAGAAGAGGTTTaGTGGAATTTCGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSFPEEV*WNFVRS
Trigger: TGACCTGACGAAATTCCACAAAACCTCTTCTGGAAA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTTCCAGAAGAGGTTTaGTGGAATTTCGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFPEEV*WNFVRS
Trigger: TGACCTGACGAAATTCCACAAAACCTCTTCTGGAAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAGTGCGTGACACCATCTaGATTGTCTTCATTGACAGG +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVVRDTI*IVFIDR
Trigger: CCTGTCAATGAAGACAATCAAGATGGTGTCACGCAC...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACGCGGATGATTTCAATTaGCTCTCCTTGCTTGAAGCT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNADDFN*LSLLEA
Trigger: AGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGC...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTAATCTCCCATGTCCAATaGTTTAGGAGGAGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVISHVQ*FRRSRE
Trigger: TTCCCTGCTCCTCCTAAACAATTGGACATGGGAGAT...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTTAACCCCAGTCAATTaGGGAAACGCTTGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVLTPVN*GNACFC
Trigger: ACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTTTCCAGAAGAGGTTTaGTGGAATTTCGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNFPEEV*WNFVRS
Trigger: TGACCTGACGAAATTCCACAAAACCTCTTCTGGAAA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTCAATTTGCTCTCCTaGCTTGAAGCTCAGTTCATT +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFNLLS*LEAQFI
Trigger: AATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTGCGGATGATTTCAATTaGCTCTCCTTGCTTGAAGCT +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVADDFN*LSLLEA
Trigger: AGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGC...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTTCTGCAGAGAACTTTaGTGTCATCTGTGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCFCREL*CHLWFV
Trigger: TACAAACCACAGATGACACAAAAGTTCTCTGCAGAA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTGCATTTCCTTGGTTGTaGAATAAGTTCTTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCAFPWL*NKFFLA
Trigger: AGCAAGAAAGAACTTATTCAACAACCAAGGAAATGC...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACATTCTTCTCTCTTTCTTaGGATGCTTCTATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTFFSLS*DASMSS
Trigger: TGAAGACATAGAAGCATCCAAAGAAAGAGAGAAGAA...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GTCCATTCTTCCATTCCTCATGATTTTAGGGTTATCCTCATTCAGATCTACTCTTCATTCTTTCCTCCTTaGACATCACAACAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: VHSSIPHDFRVILIQIYSSFFPP*TSQQAF
Trigger: AAAAGCTTGTTGTGATGTCAAAGGAGGAAAGAATGA...AGAGTAGATCTGAATGAGGATAACCCTAAAATCATGAGGAATGGAAGAATGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTTCATTCTTTCCTCCTTaGACATCACAACAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCSFFPP*TSQQAF
Trigger: AAAAGCTTGTTGTGATGTCAAAGGAGGAAAGAATGA...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTTCAATTTGCTCTCCTaGCTTGAAGCTCAGTTCATT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNFNLLS*LEAQFI
Trigger: AATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTTCTGCAGAGAACTTTaGTGTCATCTGTGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNFCREL*CHLWFV
Trigger: TACAAACCACAGATGACACAAAAGTTCTCTGCAGAA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
ENST00000646444.1
CDS-3UTR CAA 90 bp AATTCTGTGGAGCCACTTCAGAAACTCCAATGGGCCTTTGCAATATTAAAATGTCAAATGGTTCACATTTaGTTTTTGGATTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: NSVEPLQKLQWAFAILKCQMVHI*FLDCFG
Trigger: CCCAAAGCAATCCAAAAACAAAATGTGAACCATTTG...ACATTTTAATATTGCAAAGGCCCATTGGAGTTTCTGAAGTGGCTCCACAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp CCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACACACAAATGGTTCACATTTaGTTTTTGGATTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: PNNMPIKIQTSHWHLMNTQMVHI*FLDCFG
Trigger: CCCAAAGCAATCCAAAAACAAAATGTGAACCATTTG...TGTGTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTCATTCTTTCCTCCTTaGACATCACAACAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNSFFPP*TSQQAF
Trigger: AAAAGCTTGTTGTGATGTCAAAGGAGGAAAGAATGA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATTCAATTTGCTCTCCTaGCTTGAAGCTCAGTTCATT +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVFNLLS*LEAQFI
Trigger: AATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTTCTGCAGAGAACTTTaGTGTCATCTGTGGTTTGTA +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVFCREL*CHLWFV
Trigger: TACAAACCACAGATGACACAAAAGTTCTCTGCAGAA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACTGTTTTTGGATTGCTTaGGGAATGAGTATGTACTGT +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNCFWIA*GMSMYC
Trigger: ACAGTACATACTCATTCCCAAAGCAATCCAAAAACA...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATACCCAATAACATGCCAATTAAAATCCAGACTTCACATTGGCACCTAATGAACCAAATGGTTCACATTTaGTTTTTGGATTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: IPNNMPIKIQTSHWHLMNQMVHI*FLDCFG
Trigger: CCCAAAGCAATCCAAAAACAAAATGTGAACCATTTG...GTTCATTAGGTGCCAATGTGAAGTCTGGATTTTAATTGGCATGTTATTGGGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp GAAACCCAAATGGTTCACATTTTGTTTTTGGATTGCTTTGGGAATGAGTATGTATCATTCTTTCCTCCTTaGACATCACAACAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: ETQMVHILFLDCFGNEYVSFFPP*TSQQAF
Trigger: AAAAGCTTGTTGTGATGTCAAAGGAGGAAAGAATGA...TACATACTCATTCCCAAAGCAATCCAAAAACAAAATGTGAACCATTTGGGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS-3UTR CAA 90 bp ATTAGTAGAAGAGCCAGCATTATGATGTACTCATTTTGTACTCTAGGAGTTGTTTGTTTTTGGATTGCTTaGGGAATGAGTATGTACTGT +
Preference number: 5 (lower is better)
Translates to: ISRRASIMMYSFCTLGVVCFWIA*GMSMYC
Trigger: ACAGTACATACTCATTCCCAAAGCAATCCAAAAACA...AACAACTCCTAGAGTACAAAATGAGTACATCATAATGCTGGCTCTTCTACTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000646045.2
CDS TCA 72 bp CTGGGAGGTAGGCTTGGGACTGGTGGTTGTGATGGGTaGGATGCTGGCAATGGTGGTTGGCTGGCCGGATGG +
Preference number: 6 (lower is better)
Translates to: LGGRLGTGGCDG*DAGNGGWLAGW
Trigger: CCATCCGGCCAGCCAACCACCATTGCCAGCATCTCACCCATCACAACCACCAGTCCCAAGCCTACCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp CACTTTCGCCTCGGGGTCTCTGGTGGTCAAGCTGGCTaGTGTTCCGAATCTTTGGCCTGCTCCAGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: HFRLGVSGGQAG*CSESLACSSGL
Trigger: AAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp ATCCCACTTTCGCCTCGGGGTCTCTGGTGGTCAAGCTaGCTGGTGTTCCGAATCTTTGGCCTGCTCCAGTGG +
Preference number: 6 (lower is better)
Translates to: IPLSPRGLWWSS*LVFRIFGLLQW
Trigger: CCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp GAAGGCGGAAGGATGGCCTCCTTTAGTGGATCTTCCTaGGCCAGGGTCTGGGCCCTACTCACTTCTAGCTGT +
Preference number: 6 (lower is better)
Translates to: EGGRMASFSGSS*ARVWALLTSSC
Trigger: ACAGCTAGAAGTGAGTAGGGCCCAGACCCTGGCCCAGGAAGATCCACTAAAGGAGGCCATCCTTCCGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000504542.1
ENST00000506557.5
ENST00000509072.5
ENST00000512982.4
CDS CCA 72 bp CGGTACTTAGGGGCGGCTTCTGGCCAAAGGCGGGTTTaGGGAAGAGGGGCTTGGGTTCAAGATCTTGTGATG +
Preference number: 6 (lower is better)
Translates to: RYLGAASGQRRV*GRGAWVQDLVM
Trigger: CATCACAAGATCTTGAACCCAAGCCCCTCTTCCCCAAACCCGCCTTTGGCCAGAAGCCGCCCCTAAGTACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp ATGGCCTCCTTTAGTGGATCTTCCTGGGCCAGGGTCTaGGCCCTACTCACTTCTAGCTGTCGCATCTGCTCT +
Preference number: 6 (lower is better)
Translates to: MASFSGSSWARV*ALLTSSCRICS
Trigger: AGAGCAGATGCGACAGCTAGAAGTGAGTAGGGCCCAGACCCTGGCCCAGGAAGATCCACTAAAGGAGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000504542.1
ENST00000506557.5
ENST00000509072.5
ENST00000512982.4
CDS CCA 72 bp AGCTGGCTGGTGTTCCGAATCTTTGGCCTGCTCCAGTaGGCTTTAGAAACGGGGGCTTGGGTTCCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: SWLVFRIFGLLQ*ALETGAWVPCQ
Trigger: CTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp TCTCTGGTGGTCAAGCTGGCTGGTGTTCCGAATCTTTaGCCTGCTCCAGTGGGCTTTAGAAACGGGGGCTTG +
Preference number: 6 (lower is better)
Translates to: SLVVKLAGVPNL*PAPVGFRNGGL
Trigger: CAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp CTTTGGCCTGCTCCAGTGGGCTTTAGAAACGGGGGCTTGGGTTCCTaGTCAGGCTTTTCCTCAGAAGAAGGTTTGACTGCCACAGGTGGC +
Preference number: 6 (lower is better)
Translates to: LWPAPVGFRNGGLGS*SGFSSEEGLTATGG
Trigger: GCCACCTGTGGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp GTTTCAGAAATCCCACTTTCGCCTCGGGGTCTCTGGTaGTCAAGCTGGCTGGTGTTCCGAATCTTTGGCCTG +
Preference number: 6 (lower is better)
Translates to: VSEIPLSPRGLW*SSWLVFRIFGL
Trigger: CAGGCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGATTTCTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp CAGGTTTCAGAAATCCCACTTTCGCCTCGGGGTCTCTaGTGGTCAAGCTGGCTGGTGTTCCGAATCTTTGGC +
Preference number: 6 (lower is better)
Translates to: QVSEIPLSPRGL*WSSWLVFRIFG
Trigger: GCCAAAGATTCGGAACACCAGCCAGCTTGACCACCAGAGACCCCGAGGCGAAAGTGGGATTTCTGAAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS GCA 72 bp AGGGTCTGGGCCCTACTCACTTCTAGCTGTCGCATCTaGTCTGCATGTGGAACTCAAGAACTGCGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: RVWALLTSSCRI*SACGTQELRSF
Trigger: AAAGCTCCGCAGTTCTTGAGTTCCACATGCAGAGCAGATGCGACAGCTAGAAGTGAGTAGGGCCCAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506557.5
CDS CCA 72 bp CCTTGTAAATTCCATGGTCCCGCAATCACACTATCCTaGGACGGAAGGGCGGGCGAGATCTTATCACCTCTG +
Preference number: 6 (lower is better)
Translates to: PCKFHGPAITLS*DGRAGEILSPL
Trigger: CAGAGGTGATAAGATCTCGCCCGCCCTTCCGTCCCAGGATAGTGTGATTGCGGGACCATGGAATTTACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512138.1
CDS CAA 72 bp GCTCCAGTGGGCTTTAGAAACGGGGGCTTGGGTTCCTaGTCAGGCTTTTCCTCAGAAGAAGGTTTGACTGCC +
Preference number: 6 (lower is better)
Translates to: APVGFRNGGLGS*SGFSSEEGLTA
Trigger: GGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp CTTTGGCCTGCTCCAGTGGGCTTTAGAAACGGGGGCTaGGGTTCCTTGTCAGGCTTTTCCTCAGAAGAAGGT +
Preference number: 6 (lower is better)
Translates to: LWPAPVGFRNGG*GSLSGFSSEEG
Trigger: ACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp GTTCCGAATCTTTGGCCTGCTCCAGTGGGCTTTAGAAACGGGGGCTaGGGTTCCTTGTCAGGCTTTTCCTCAGAAGAAGGTTTGACTGCC +
Preference number: 6 (lower is better)
Translates to: VPNLWPAPVGFRNGG*GSLSGFSSEEGLTA
Trigger: GGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAAGATTCGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS TCA 72 bp TATCACCTCTGGGGTGATCTCTGGAAACTTCTGGTGTaGGCTTCATGCTGCGAGTGCTGGGAAGTGGCTAGA +
Preference number: 6 (lower is better)
Translates to: YHLWGDLWKLLV*ASCCECWEVAR
Trigger: TCTAGCCACTTCCCAGCACTCGCAGCATGAAGCTCACACCAGAAGTTTCCAGAGATCACCCCAGAGGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512138.1
CDS GCA 72 bp ATACCTTCCAAAGGCTCTGCTTTCCCTGACAACTTGTaGCAGCAAGTGGAAGCCACCGTTTATAGAGGCCCC +
Preference number: 6 (lower is better)
Translates to: IPSKGSAFPDNL*QQVEATVYRGP
Trigger: GGGGCCTCTATAAACGGTGGCTTCCACTTGCTGGCACAAGTTGTCAGGGAAAGCAGAGCCTTTGGAAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS CCA 72 bp TTCCTCAGAAGAAGGTTTGACTGCCACAGGTGGCTTTaGGGACCCAAACTTAGGTACATTGCTGGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: FLRRRFDCHRWL*GPKLRYIAGSC
Trigger: GCAGGACCCAGCAATGTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp TTTGGCCTGCTCCAGTGGGCTTTAGAAACGGGGGCTTaGGTTCCTTGTCAGGCTTTTCCTCAGAAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: FGLLQWALETGA*VPCQAFPQKKV
Trigger: AACCTTCTTCTGAGGAAAAGCCTGACAAGGAACCCAAGCCCCCGTTTCTAAAGCCCACTGGAGCAGGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp GATGAAGACACATTCTTCATGGGGCTTTCGTCTTCATaGGAGTTCTCGGTACTTAGGGGCGGCTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: DEDTFFMGLSSS*EFSVLRGGFWP
Trigger: TGGCCAGAAGCCGCCCCTAAGTACCGAGAACTCCCATGAAGACGAAAGCCCCATGAAGAATGTGTCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp GCACAGGAGTCATCGTCTCAACTCCTGTCTTCTCACTaGGGGCTGACAAAAGGCAGGTATCCTCTCCGTAAT +
Preference number: 6 (lower is better)
Translates to: AQESSSQLLSSH*GLTKGRYPLRN
Trigger: ATTACGGAGAGGATACCTGCCTTTTGTCAGCCCCCAGTGAGAAGACAGGAGTTGAGACGATGACTCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS CAA 72 bp CCAGGAGGCCAGGGAAATGTAGGTTTGGAATCTTCTTaGGGCAAGTTGATGGGCTTGGGGCCTACAGGTTTC +
Preference number: 6 (lower is better)
Translates to: PGGQGNVGLESS*GKLMGLGPTGF
Trigger: GAAACCTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTGGCCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp CCAGGAGGCCAGGGAAATGTAGGTTTGGAATCTTCTTTGGGCAAGTaGATGGGCTTGGGGCCTACAGGTTTCAGAAATCCCACTTTCGCC +
Preference number: 6 (lower is better)
Translates to: PGGQGNVGLESSLGK*MGLGPTGFRNPTFA
Trigger: GGCGAAAGTGGGATTTCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTGGCCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp CAGGGAAATGTAGGTTTGGAATCTTCTTTGGGCAAGTTGATGGGCTaGGGGCCTACAGGTTTCAGAAATCCCACTTTCGCCTCGGGGTCT +
Preference number: 6 (lower is better)
Translates to: QGNVGLESSLGKLMG*GPTGFRNPTFASGS
Trigger: AGACCCCGAGGCGAAAGTGGGATTTCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp GGCTTGTTTCCAGGAGGCCAGGGAAATGTAGGTTTGGAATCTTCTTaGGGCAAGTTGATGGGCTTGGGGCCTACAGGTTTCAGAAATCCC +
Preference number: 6 (lower is better)
Translates to: GLFPGGQGNVGLESS*GKLMGLGPTGFRNP
Trigger: GGGATTTCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTGGCCTCCTGGAAACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS TCA 72 bp ACTGCTGAGGATACCTTCCAAAGGCTCTGCTTTCCCTaGCAACTTGTGCCAGCAAGTGGAAGCCACCGTTTA +
Preference number: 6 (lower is better)
Translates to: TAEDTFQRLCFP*QLVPASGSHRL
Trigger: TAAACGGTGGCTTCCACTTGCTGGCACAAGTTGTCAGGGAAAGCAGAGCCTTTGGAAGGTATCCTCAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS GCA 72 bp TTCCTTGTCAGGCTTTTCCTCAGAAGAAGGTTTGACTaGCACAGGTGGCTTTGGGGACCCAAACTTAGGTAC +
Preference number: 6 (lower is better)
Translates to: FLVRLFLRRRFD*HRWLWGPKLRY
Trigger: GTACCTAAGTTTGGGTCCCCAAAGCCACCTGTGGCAGTCAAACCTTCTTCTGAGGAAAAGCCTGACAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp TGCCTGGCACACAATGACCCCGAAGATGGTGCAGCTTaGATAGTGAATGTGCAAGTTAGCTATGCAGAGTGT +
Preference number: 6 (lower is better)
Translates to: CLAHNDPEDGAA*IVNVQVSYAEC
Trigger: ACACTCTGCATAGCTAACTTGCACATTCACTATCCAAGCTGCACCATCTTCGGGGTCATTGTGTGCCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS CAA 72 bp GTAGGTTTGGAATCTTCTTTGGGCAAGTTGATGGGCTaGGGGCCTACAGGTTTCAGAAATCCCACTTTCGCC +
Preference number: 6 (lower is better)
Translates to: VGLESSLGKLMG*GPTGFRNPTFA
Trigger: GGCGAAAGTGGGATTTCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS GCA 72 bp CCCCGTGTTATATTTCGCCATGAGGGACTTTACATCTaGCTTTCCATCCTTTTCCAGGAAGGCTTCTCTGCT +
Preference number: 6 (lower is better)
Translates to: PRVIFRHEGLYI*LSILFQEGFSA
Trigger: AGCAGAGAAGCCTTCCTGGAAAAGGATGGAAAGGCAGATGTAAAGTCCCTCATGGCGAAATATAACACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510188.1
CDS CCA 72 bp AGAGGTTTTGTGGAATTTCGTCAGGTCAACATTTGGTaGTCTGTTGGGTTTTGGTGGAGGTGGACCCAAGGT +
Preference number: 6 (lower is better)
Translates to: RGFVEFRQVNIW*SVGFWWRWTQG
Trigger: ACCTTGGGTCCACCTCCACCAAAACCCAACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp CAGGGAAATGTAGGTTTGGAATCTTCTTTGGGCAAGTaGATGGGCTTGGGGCCTACAGGTTTCAGAAATCCC +
Preference number: 6 (lower is better)
Translates to: QGNVGLESSLGK*MGLGPTGFRNP
Trigger: GGGATTTCTGAAACCTGTAGGCCCCAAGCCCATCAACTTGCCCAAAGAAGATTCCAAACCTACATTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351578.12
ENST00000510188.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp CAGAAGAGGTTTTGTGGAATTTCGTCAGGTCAACATTaGGTGGTCTGTTGGGTTTTGGTGGAGGTGGACCCA +
Preference number: 6 (lower is better)
Translates to: QKRFCGISSGQH*VVCWVLVEVDP
Trigger: TGGGTCCACCTCCACCAAAACCCAACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp CCCCTTGCTGTTCTGCCCAACCATTTTCCTTCTGGGTaGTCTGTGATGCGGATGATTTCAATTTGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: PLAVLPNHFPSG*SVMRMISICSP
Trigger: AGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGGAAAATGGTTGGGCAGAACAGCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp CTCCCTGTTCCAATGTCTGCAATGCACAATCTCCAATaGAGCAAGCACAGGAGTCATCGTCTCAACTCCTGT +
Preference number: 6 (lower is better)
Translates to: LPVPMSAMHNLQ*SKHRSHRLNSC
Trigger: ACAGGAGTTGAGACGATGACTCCTGTGCTTGCTCAATTGGAGATTGTGCATTGCAGACATTGGAACAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS CAA 90 bp GAAGAGGTTTTGTGGAATTTCGTCAGGTCAACATTTGGTGGTCTGTaGGGTTTTGGTGGAGGTGGACCCAAGGTAAACAAGGGAGGCAAT +
Preference number: 6 (lower is better)
Translates to: EEVLWNFVRSTFGGL*GFGGGGPKVNKGGN
Trigger: ATTGCCTCCCTTGTTTACCTTGGGTCCACCTCCACCAAAACCCAACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp GGTACATTGCTGGGTCCTGCAGGAGGGCTGGCATTTCCTTGGTTGTaGAATAAGTTCTTTCTTGCTTGTATTCCTGAAGATGAGTTTGGC +
Preference number: 6 (lower is better)
Translates to: GTLLGPAGGLAFPWL*NKFFLACIPEDEFG
Trigger: GCCAAACTCATCTTCAGGAATACAAGCAAGAAAGAACTTATTCAACAACCAAGGAAATGCCAGCCCTCCTGCAGGACCCAGCAATGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351578.12
ENST00000506557.5
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp CCATATGAACCCCTTGCTGTTCTGCCCAACCATTTTCCTTCTGGGTaGTCTGTGATGCGGATGATTTCAATTTGCTCTCCTTGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: PYEPLAVLPNHFPSG*SVMRMISICSPCLK
Trigger: CTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGGAAAATGGTTGGGCAGAACAGCAAGGGGTTCATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp AGAAGAGGTTTTGTGGAATTTCGTCAGGTCAACATTTaGTGGTCTGTTGGGTTTTGGTGGAGGTGGACCCAA +
Preference number: 6 (lower is better)
Translates to: RRGFVEFRQVNI*WSVGFWWRWTQ
Trigger: TTGGGTCCACCTCCACCAAAACCCAACAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp TTGTGGAATTTCGTCAGGTCAACATTTGGTGGTCTGTaGGGTTTTGGTGGAGGTGGACCCAAGGTAAACAAG +
Preference number: 6 (lower is better)
Translates to: LWNFVRSTFGGL*GFGGGGPKVNK
Trigger: CTTGTTTACCTTGGGTCCACCTCCACCAAAACCCAACAGACCACCAAATGTTGACCTGACGAAATTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS TCA 72 bp GCTGTGTGGTCTGTCCAGCTTTCACACATTGATATGTaGGGCTACATTTGCATGTTATCTCAACCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: AVWSVQLSHIDM*GYICMLSQPSE
Trigger: CTCTGAGGGTTGAGATAACATGCAAATGTAGCCTCACATATCAATGTGTGAAAGCTGGACAGACCACACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS CCA 72 bp ATCTTCCTCTTCAATCCCATCATAAATGTCATCATCTaGTGGTGGAGGGAATATCCCTCCACTTCCACTCTG +
Preference number: 6 (lower is better)
Translates to: IFLFNPIINVII*WWREYPSTSTL
Trigger: CAGAGTGGAAGTGGAGGGATATTCCCTCCACCACCAGATGATGACATTTATGATGGGATTGAAGAGGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp AGGACCACGTATTACTCTTCTCTTGAACCTGTAGTGTaGAGCCATCATCAGCATCTTCCTCTTCAATCCCAT +
Preference number: 6 (lower is better)
Translates to: RTTYYSSLEPVV*SHHQHLPLQSH
Trigger: ATGGGATTGAAGAGGAAGATGCTGATGATGGCTCCACACTACAGGTTCAAGAGAAGAGTAATACGTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000512982.4
ENST00000646045.2
ENST00000646444.1
CDS CAA 72 bp CTGGGTCCTGCAGGAGGGCTGGCATTTCCTTGGTTGTaGAATAAGTTCTTTCTTGCTTGTATTCCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: LGPAGGLAFPWL*NKFFLACIPED
Trigger: ATCTTCAGGAATACAAGCAAGAAAGAACTTATTCAACAACCAAGGAAATGCCAGCCCTCCTGCAGGACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351578.12
ENST00000506557.5
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp GTCTGGCCTTTGCTAGTACTGTTTCCAGAAGAGGTTTaGTGGAATTTCGTCAGGTCAACATTTGGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: VWPLLVLFPEEV*WNFVRSTFGGL
Trigger: CAGACCACCAAATGTTGACCTGACGAAATTCCACAAAACCTCTTCTGGAAACAGTACTAGCAAAGGCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS GCA 72 bp AATTTCCCTTTAACCCCAGTCAATTTGGGAAACGCTTaGTTCTGTTCATTTTCTGAGGTTGGAGGAGTAGGC +
Preference number: 6 (lower is better)
Translates to: NFPLTPVNLGNA*FCSFSEVGGVG
Trigger: GCCTACTCCTCCAACCTCAGAAAATGAACAGAAGCAAGCGTTTCCCAAATTGACTGGGGTTAAAGGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS GCA 72 bp CCTTCTGGGTTGTCTGTGATGCGGATGATTTCAATTTaGTCTCCTTGCTTGAAGCTCAGTTCATTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: PSGLSVMRMISI*SPCLKLSSFFP
Trigger: AGGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CCA 72 bp TTCTCTTTCCAAAGCACTTCATGGCTTCAGCTGCTCTaGGCTCTCACTTGTCCATTCATTCATGGATTCATT +
Preference number: 6 (lower is better)
Translates to: FSFQSTSWLQLL*ALTCPFIHGFI
Trigger: AATGAATCCATGAATGAATGGACAAGTGAGAGCCCAGAGCAGCTGAAGCCATGAAGTGCTTTGGAAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504542.1
ENST00000506557.5
ENST00000509072.5
CDS CCA 72 bp GTAAGGAGAAAACTGGCTCCATACATGAGGCAATTCTaGATTTCTACTAACTCCTCAAAGGGGACTGCAAAG +
Preference number: 6 (lower is better)
Translates to: VRRKLAPYMRQF*ISTNSSKGTAK
Trigger: CTTTGCAGTCCCCTTTGAGGAGTTAGTAGAAATCCAGAATTGCCTCATGTATGGAGCCAGTTTTCTCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS CAA 72 bp TCCTTCTGGGTTGTCTGTGATGCGGATGATTTCAATTaGCTCTCCTTGCTTGAAGCTCAGTTCATTCTTTCC +
Preference number: 6 (lower is better)
Translates to: SFWVVCDADDFN*LSLLEAQFILS
Trigger: GGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp TTAGGTACATTGCTGGGTCCTGCAGGAGGGCTGGCATTTCCTTGGTaGTTGAATAAGTTCTTTCTTGCTTGTATTCCTGAAGATGAGTTT +
Preference number: 6 (lower is better)
Translates to: LGTLLGPAGGLAFPW*LNKFFLACIPEDEF
Trigger: AAACTCATCTTCAGGAATACAAGCAAGAAAGAACTTATTCAACAACCAAGGAAATGCCAGCCCTCCTGCAGGACCCAGCAATGTACCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000351578.12
ENST00000506557.5
ENST00000510188.1
ENST00000512138.1
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp TCCTTCTGGGTTGTCTGTGATGCGGATGATTTCAATTTGCTCTCCTaGCTTGAAGCTCAGTTCATTCTTTCCTCCTTTGACATCACAACA +
Preference number: 6 (lower is better)
Translates to: SFWVVCDADDFNLLS*LEAQFILSSFDITT
Trigger: TGTTGTGATGTCAAAGGAGGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 90 bp CAACCATTTTCCTTCTGGGTTGTCTGTGATGCGGATGATTTCAATTaGCTCTCCTTGCTTGAAGCTCAGTTCATTCTTTCCTCCTTTGAC +
Preference number: 6 (lower is better)
Translates to: QPFSFWVVCDADDFN*LSLLEAQFILSSFD
Trigger: GTCAAAGGAGGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAACCCAGAAGGAAAATGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp GTTGTCTGTGATGCGGATGATTTCAATTTGCTCTCCTaGCTTGAAGCTCAGTTCATTCTTTCCTCCTTTGAC +
Preference number: 6 (lower is better)
Translates to: VVCDADDFNLLS*LEAQFILSSFD
Trigger: GTCAAAGGAGGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp AGCAAGTGGAAGCCACCGTTTATAGAGGCCCCATTCTaGCTGTATGTTCGCATAAATAGAATCCATCTCTTT +
Preference number: 6 (lower is better)
Translates to: SKWKPPFIEAPF*LYVRINRIHLF
Trigger: AAAGAGATGGATTCTATTTATGCGAACATACAGCAAGAATGGGGCCTCTATAAACGGTGGCTTCCACTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS GCA 72 bp TTGTCTGTGATGCGGATGATTTCAATTTGCTCTCCTTaGTTGAAGCTCAGTTCATTCTTTCCTCCTTTGACA +
Preference number: 6 (lower is better)
Translates to: LSVMRMISICSP*LKLSSFFPPLT
Trigger: TGTCAAAGGAGGAAAGAATGAACTGAGCTTCAAGCAAGGAGAGCAAATTGAAATCATCCGCATCACAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS GCA 72 bp TCCACTCTGACTGTGGCTGCTAATATCATCCTGCTCTaGAACATCATCATATACTTCTTGGTCATCTTCAAT +
Preference number: 6 (lower is better)
Translates to: STLTVAANIILL*NIIIYFLVIFN
Trigger: ATTGAAGATGACCAAGAAGTATATGATGATGTTGCAGAGCAGGATGATATTAGCAGCCACAGTCAGAGTGGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp TCTCCTTGCTTGAAGCTCAGTTCATTCTTTCCTCCTTaGACATCACAACAAGCTTTTGCAAGATGGATGACT +
Preference number: 6 (lower is better)
Translates to: SPCLKLSSFFPP*TSQQAFARWMT
Trigger: AGTCATCCATCTTGCAAAAGCTTGTTGTGATGTCAAAGGAGGAAAGAATGAACTGAGCTTCAAGCAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351578.12
ENST00000512982.4
ENST00000515010.5
ENST00000646045.2
CDS CAA 72 bp GTAAAAATTGTTAGGTTGTTTTCACATCTGCAGGTGTaGATGCGTCGGAACTCCCTACCTAGAAGTTTCTAC +
Preference number: 6 (lower is better)
Translates to: VKIVRLFSHLQV*MRRNSLPRSFY
Trigger: GTAGAAACTTCTAGGTAGGGAGTTCCGACGCATCAACACCTGCAGATGTGAAAACAACCTAACAATTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS CCA 72 bp AATTGTTTAGGAGGAGCAGGGAAAACTGGATTTGGTTaGTTGACTCTTACGATGAACCTTCATTATTGTCTG +
Preference number: 6 (lower is better)
Translates to: NCLGGAGKTGFG*LTLTMNLHYCL
Trigger: CAGACAATAATGAAGGTTCATCGTAAGAGTCAACCAACCAAATCCAGTTTTCCCTGCTCCTCCTAAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS CCA 72 bp GTGTGGTGTTGGTATAAGAACAGGCAAATAGACCAATaGAATAGAGCAGAAAATTCAGTGACATACACAAAT +
Preference number: 6 (lower is better)
Translates to: VWCWYKNRQIDQ*NRAENSVTYTN
Trigger: ATTTGTGTATGTCACTGAATTTTCTGCTCTATTCCATTGGTCTATTTGCCTGTTCTTATACCAACACCACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644817.1
CDS CAA 72 bp GGCTACATTTGCATGTTATCTCAACCCTCAGAGCATTaGTATAGCTGGCCAGGTTTATCTTGTTATTATTTT +
Preference number: 6 (lower is better)
Translates to: GYICMLSQPSEH*YSWPGLSCYYF
Trigger: AAAATAATAACAAGATAAACCTGGCCAGCTATACAAATGCTCTGAGGGTTGAGATAACATGCAAATGTAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503065.1
CDS CAA 72 bp ATTTGGTTGGTTGACTCTTACGATGAACCTTCATTATaGTCTGAGTCAGAGACTTTAGGTTTCTCTCGTATA +
Preference number: 6 (lower is better)
Translates to: IWLVDSYDEPSL*SESETLGFSRI
Trigger: TATACGAGAGAAACCTAAAGTCTCTGACTCAGACAATAATGAAGGTTCATCGTAAGAGTCAACCAACCAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646444.1
CDS CAA 90 bp GAAAACTGGATTTGGTTGGTTGACTCTTACGATGAACCTTCATTATaGTCTGAGTCAGAGACTTTAGGTTTCTCTCGTATACTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: ENWIWLVDSYDEPSL*SESETLGFSRILFF
Trigger: AAAGAAAAGTATACGAGAGAAACCTAAAGTCTCTGACTCAGACAATAATGAAGGTTCATCGTAAGAGTCAACCAACCAAATCCAGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646444.1