RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FXYD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000137726

Ensembl transcript IDs: ENST00000260282.8, ENST00000524656.5, ENST00000524841.5, ENST00000526014.6, ENST00000527053.1, ENST00000527429.5, ENST00000527717.5, ENST00000529335.6, ENST00000530956.6, ENST00000534125.1, ENST00000539526.5, ENST00000583233.5, ENST00000583660.5, ENST00000584230.1, ENST00000584394.5

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGGGCTGGTCTCGGGCAACAAGCAGCCTCCTAGGAGCAGAAGGTaGTGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGC +
Preference number: 1 (lower is better)
Translates to: RGLVSGNKQPPRSRR*WRATGAGRSRWPCG
Trigger: GCCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCTTGTTGCCCGAGACCAGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR CCA 90 bp GGCCCTGGAGACCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTaGCCATGCACCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGT +
Preference number: 1 (lower is better)
Translates to: GPGDPLSWHCGSMSG*PCTWQQSLPEPQRG
Trigger: ACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR CCA 90 bp GGAGTGAGGGGGCAATGCTGCAGAGGCCCTGGAGACCCACTCTCCTaGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAG +
Preference number: 1 (lower is better)
Translates to: GVRGQCCRGPGDPLS*HCGSMSGWPCTWQQ
Trigger: CTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCCAGGGCCTCTGCAGCATTGCCCCCTCACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR GCA 90 bp AGGGGGCAATGCTGCAGAGGCCCTGGAGACCCACTCTCCTGGCACTaGGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTT +
Preference number: 1 (lower is better)
Translates to: RGQCCRGPGDPLSWH*GSMSGWPCTWQQSL
Trigger: AAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCCAGGGCCTCTGCAGCATTGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR GCA 90 bp GGAGACCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATaGACCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCT +
Preference number: 1 (lower is better)
Translates to: GDPLSWHCGSMSGWP*TWQQSLPEPQRGLS
Trigger: AGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR CCA 90 bp CCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTaGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCC +
Preference number: 1 (lower is better)
Translates to: PLSWHCGSMSGWPCT*QQSLPEPQRGLSVP
Trigger: GGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR GCA 90 bp TCCCACTCTCGTTATGACCTTCAACCTCTCACTGTTCCCAAGGGCTaGACGGAGCCTGCTGAGTCTCCAACCCACCTCGCTCACCGCTCT +
Preference number: 1 (lower is better)
Translates to: SHSRYDLQPLTVPKG*TEPAESPTHLAHRS
Trigger: AGAGCGGTGAGCGAGGTGGGTTGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTCATAACGAGAGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR GCA 90 bp CAACGGAACAGGAGTCCTTCAACTATTGCCTGCCAGAGACCCAATTaGAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATTG +
Preference number: 1 (lower is better)
Translates to: QRNRSPSTIACQRPN*RDCSLHLDELGCRL
Trigger: CAATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCCTGTTCCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAACACATCACGGGAGGTaGGCAGGACCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGATHHGR*AGPQAA
Trigger: TGCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGT...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR GCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR GCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATCCATCCATCCCGGTGTaGTGGCCCCAACGGAACAGG +
Preference number: 2 (lower is better)
Translates to: SARFGWFPREHRGQEGRDPSIPV*WPQRNR
Trigger: CCTGTTCCGTTGGGGCCAGCACACCGGGATGGATGG...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATACACATCACGGGAGGTaGGCAGGACCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: SARFGWFPREHRGQEGRDTHHGR*AGPQAA
Trigger: TGCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGT...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCACCATCCATCCCGGTGTaGTGGCCCCAACGGAACAGG +
Preference number: 2 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPPSIPV*WPQRNR
Trigger: CCTGTTCCGTTGGGGCCAGCACACCGGGATGGATGG...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAACACATCACGGGAGGTaGGCAGGACCGCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPTHHGR*AGPQAA
Trigger: TGCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGT...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR GCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATGCAGGGACTGTAGTCTaGATCTGGATGAGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SARFGWFPREHRGQEGRDAGTVV*IWMSWA
Trigger: AGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGC...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCATTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGALEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAGCAGGGACTGTAGTCTaGATCTGGATGAGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPAGTVV*IWMSWA
Trigger: AGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGC...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
3UTR-3UTR CCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATAAGGGGCGGGGCAGATaGGGACTCCTCGTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDKGRGR*GLLVEA
Trigger: GGCTTCCACGAGGAGTCCCCATCTGCCCCGCCCCTT...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR TCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATTTCCCACTCTCGTTATaGCCTTCAACCTCTCACTGT +
Preference number: 2 (lower is better)
Translates to: SARFGWFPREHRGQEGRDFPLSL*PSTSHC
Trigger: ACAGTGAGAGGTTGAAGGTCATAACGAGAGTGGGAA...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR GCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 2 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CCA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
3UTR-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCACCTTCAACTATTGCCTaGCAGAGACCCAATTGCAGG +
Preference number: 2 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPPSTIA*QRPNCR
Trigger: CCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR GCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGAAGACCACTGCCCGTaGTCTTACCCTACGCATCCC +
Preference number: 2 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLEDHCP*SYPTHP
Trigger: GGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTC...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR TCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGCCATGGAGTTATTGCTaGGAAGATATGCAGGGGACA +
Preference number: 2 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLPWSYC*EDMQGT
Trigger: TGTCCCCTGCATATCTTCTCAGCAATAACTCCATGG...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
3UTR-3UTR CCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACATTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
3UTR GCA 72 bp CTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATaGACCTGGCAACAGTCCCTTCCTGAGCCACAGAGG +
Preference number: 3 (lower is better)
Translates to: LSWHCGSMSGWP*TWQQSLPEPQR
Trigger: CCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR CCA 72 bp TGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTaGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTC +
Preference number: 3 (lower is better)
Translates to: WHCGSMSGWPCT*QQSLPEPQRGL
Trigger: GAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR CCA 72 bp GACCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTaGCCATGCACCTGGCAACAGTCCCTTCCTGAGCCA +
Preference number: 3 (lower is better)
Translates to: DPLSWHCGSMSG*PCTWQQSLPEP
Trigger: TGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR CCA 72 bp GTTTGGTGGAGTGAGGGGGCAATGCTGCAGAGGCCCTaGAGACCCACTCTCCTGGCACTGCGGGAGCATGTC +
Preference number: 3 (lower is better)
Translates to: VWWSEGAMLQRP*RPTLLALREHV
Trigger: GACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCCAGGGCCTCTGCAGCATTGCCCCCTCACTCCACCAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR CCA 72 bp CAGAGAACAGCAATGGGTCACAGCGCACGGTTTGGTTaGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGG +
Preference number: 3 (lower is better)
Translates to: QRTAMGHSARFG*FPREHRGQEGR
Trigger: CCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGACCCATTGCTGTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CAA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATGGAGTCCTTCAACTATaGCCTGCCAGAGACCCAATT +
Preference number: 3 (lower is better)
Translates to: SARFGWFPREHRGQEGRDGVLQL*PARDPI
Trigger: AATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCC...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR GCA 72 bp CGTTATGACCTTCAACCTCTCACTGTTCCCAAGGGCTaGACGGAGCCTGCTGAGTCTCCAACCCACCTCGCT +
Preference number: 3 (lower is better)
Translates to: RYDLQPLTVPKG*TEPAESPTHLA
Trigger: AGCGAGGTGGGTTGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTCATAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR CCA 72 bp GATACAGAGAACAGCAATGGGTCACAGCGCACGGTTTaGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGG +
Preference number: 3 (lower is better)
Translates to: DTENSNGSQRTV*LVSAGTQRTGG
Trigger: CCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGACCCATTGCTGTTCTCTGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR GCA 72 bp AGGAGTCCTTCAACTATTGCCTGCCAGAGACCCAATTaGAGGGACTGTAGTCTGCATCTGGATGAGCTGGGC +
Preference number: 3 (lower is better)
Translates to: RSPSTIACQRPN*RDCSLHLDELG
Trigger: GCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR GCA 72 bp TGGCCCCAACGGAACAGGAGTCCTTCAACTATTGCCTaGCAGAGACCCAATTGCAGGGACTGTAGTCTGCAT +
Preference number: 3 (lower is better)
Translates to: WPQRNRSPSTIA*QRPNCRDCSLH
Trigger: ATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCCTGTTCCGTTGGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CAA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAGCTTTGTATCTCCAGTaGCTAAGAGACCTTCAGACT +
Preference number: 3 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPALYLQ*LRDLQT
Trigger: AGTCTGAAGGTCTCTTAGCAACTGGAGATACAAAGC...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CAA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGCACCAGCTCCTTGCTTaGTATCTCCAGTTGCTAAGA +
Preference number: 3 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLHQLLA*YLQLLR
Trigger: TCTTAGCAACTGGAGATACAAAGCAAGGAGCTGGTG...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
3UTR-3UTR CAA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGCTTTGTATCTCCAGTaGCTAAGAGACCTTCAGACT +
Preference number: 3 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLALYLQ*LRDLQT
Trigger: AGTCTGAAGGTCTCTTAGCAACTGGAGATACAAAGC...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAAGGAGTCGGGCTGGCTaGGAGGCGCGTCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGARSRAG*EARPAG
Trigger: CCCCGCAGGACGCGCCTCCCAGCCAGCCCGACTCCT...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR TCA 90 bp GGAGACCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGGTCTTCCTCCGGCCTTaGGCAAGCAGCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GDPLSWHCGSMSGWPCTWVFLRP*ASSRHC
Trigger: GCAGTGGCGGCTGCTTGCTCAAGGCCGGAGGAAGAC...CCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR TCA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGCCTAGGAGCAGAAGGTaGTGGAGGGCCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWPRSRR*WRATGA
Trigger: TGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGG...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCACCTAGGAGCAGAAGGTaGTGGAGGGCCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGAPRSRR*WRATGA
Trigger: TGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGG...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGAGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATGCCGCCGAGGAGGCGTaGAAGCGCCGGAGCGGATTT +
Preference number: 4 (lower is better)
Translates to: SARFGWFPREHRGQEGRDAAEEA*KRRSGF
Trigger: AAATCCGCTCCGGCGCTTGCACGCCTCCTCGGCGGC...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CCA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCACACATCACGGGAGGTaGGCAGGACCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGTHHGR*AGPQAA
Trigger: TGCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGT...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp GTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGGGGCAGGGCGGTGGGTaGGGCTTGAGCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VTHTHTHTHITGGGQDRRGQGGG*GLSCFP
Trigger: GGGAAAGCAGCTCAAGCCTCACCCACCGCCCTGCCC...CCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260282.8
ENST00000529335.6
ENST00000539526.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCCCTAGGAGCAGAAGGTaGTGGAGGGCCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCPRSRR*WRATGA
Trigger: TGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGG...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATCCTAGGAGCAGAAGGTaGTGGAGGGCCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: SARFGWFPREHRGQEGRDPRSRR*WRATGA
Trigger: TGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGG...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTCTGCACGGAGCCTGCTaGGTCTCCAACCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPLHGAC*VSNPPR
Trigger: GCGAGGTGGGTTGGAGACTCAGCAGGCTCCGTGCAG...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCCTGCACGGAGCCTGCTaGGTCTCCAACCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCLHGAC*VSNPPR
Trigger: GCGAGGTGGGTTGGAGACTCAGCAGGCTCCGTGCAG...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGCAAGCAGCCGCCACTaGACTTCACCTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHASSRH*TSPLGH
Trigger: GTGGCCGAGAGGTGAAGTGCAGTGGCGGCTGCTTGC...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260282.8
CDS-3UTR GCA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCTGCGGGAGTTGCCTCTaGTGCCCATCTAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGCGSCL*CPSKGT
Trigger: CGTCCCCTTAGATGGGCAGCAGAGGCAACTCCCGCA...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATATCCACCTCTGGCCCTaGCAGGAGCAGTACCACCCC +
Preference number: 4 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHIHLWP*QEQYHP
Trigger: GGGGTGGTACTGCTCCTGGCAGGGCCAGAGGTGGAT...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527717.5
CDS-3UTR GCA 90 bp TCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCCCACTCTCCTGGCACTaGGGGAGCATGTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SPGTAGACLAGHAPGNSPPLSWH*GSMSGW
Trigger: CCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGG...GGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR GCA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGGAAGCAACAGGAGACTaGCGCCGAGGAGGCGTGCAA +
Preference number: 4 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWEATGD*RRGGVQ
Trigger: TTGCACGCCTCCTCGGCGGCAGTCTCCTGTTGCTTC...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR GCA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTGGACAGCCCACTCCGTaGTGCCGTCCGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPGQPTP*CRPLAS
Trigger: AGAAGCCAGCGGACGGCAGCACGGAGTGGGCTGTCC...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR GCA 90 bp AGACCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAGTCAAGGCCCAAACCTaGACAGCCGGTCCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RPTLLALREHVWLAMHLAVKAQT*TAGPLR
Trigger: TCGGAGGGGACCGGCTGTGCAGGTTTGGGCCTTGAC...TGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR TCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGGCGGTGGGTGAGGCTTaGGCTGCTTTCCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPAVGEA*AAFPPP
Trigger: GGGAGGCGGGAAAGCAGCTCAAGCCTCACCCACCGC...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260282.8
ENST00000529335.6
ENST00000539526.5
CDS-3UTR TCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCGGTGGGTGAGGCTTaGGCTGCTTTCCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQAVGEA*AAFPPP
Trigger: GGGAGGCGGGAAAGCAGCTCAAGCCTCACCCACCGC...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260282.8
ENST00000529335.6
ENST00000539526.5
CDS-3UTR TCA 90 bp GGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCCTGGCAACAGTCCCTTCCTaGGCCACAGAGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GTAGACLAGHAPGNSPFLATVPS*ATEGSL
Trigger: GAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGC...CAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR GCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SARFGWFPREHRGQEGRDGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTCGGAAGGGCATAGCCTaGCTGACGTCAACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPRKGIA*LTSTLG
Trigger: GCCCAGCGTTGACGTCAGGCAGGCTATGCCCTTCCG...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp TGGTCTCGGGCAACAAGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGCGGAAGGGCATAGCCTaGCTGACGTCAACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WSRATSSLLGAEGDGGPRRKGIA*LTSTLG
Trigger: GCCCAGCGTTGACGTCAGGCAGGCTATGCCCTTCCG...CCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCTTGTTGCCCGAGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCCCATCCATCCCGGTGTaGTGGCCCCAACGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCPSIPV*WPQRNR
Trigger: CCTGTTCCGTTGGGGCCAGCACACCGGGATGGATGG...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp TGGTCTCGGGCAACAAGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGCCATCCATCCCGGTGTaGTGGCCCCAACGGAACAGG +
Preference number: 4 (lower is better)
Translates to: WSRATSSLLGAEGDGGPRPSIPV*WPQRNR
Trigger: CCTGTTCCGTTGGGGCCAGCACACCGGGATGGATGG...CCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCTTGTTGCCCGAGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAACTGTTCCCAAGGGCTaGACGGAGCCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGATVPKG*TEPAES
Trigger: AGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGT...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCACAGCCCACTCCGTGCTaGCGTCCGCTGGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPQPTPC*RPLASG
Trigger: CCCAGAAGCCAGCGGACGGCAGCACGGAGTGGGCTG...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CCA 90 bp CCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGGCTGGCCATGCACCTaGCAACAGTCCCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTLLALREHVWLAMHLATGWPCT*QQSLPE
Trigger: CTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCC...TGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp CTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCCGGGAGCATGTCTGGCTaGCCATGCACCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LALREHVWLAMHLATVPSGSMSG*PCTWQQ
Trigger: CTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCC...GGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp CCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAATGCTGCAGAGGCCCTaGAGACCCACTCTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PTLLALREHVWLAMHLATMLQRP*RPTLLA
Trigger: TGCCAGGAGAGTGGGTCTCCAGGGCCTCTGCAGCAT...TGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCCCGTCCGCTGGCTTCTaGGTAGCGGCCGCGCGCAGA +
Preference number: 4 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTPSAGF*VAAARR
Trigger: TCTGCGCGCGGCCGCTACCCAGAAGCCAGCGGACGG...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR TCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCCTAGGAGCAGAAGGTaGTGGAGGGCCACGGGGGCA +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPPRSRR*WRATGA
Trigger: TGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGG...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGCTGCACGGAGCCTGCTaGGTCTCCAACCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQLHGAC*VSNPPR
Trigger: GCGAGGTGGGTTGGAGACTCAGCAGGCTCCGTGCAG...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCACTGCACGGAGCCTGCTaGGTCTCCAACCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPLHGAC*VSNPPR
Trigger: GCGAGGTGGGTTGGAGACTCAGCAGGCTCCGTGCAG...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATTCACCTAACTTGAAATaGTTGCCCGCCCCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHSPNLK*LPAPPS
Trigger: GCTGGGCGGGGCGGGCAATCATTTCAAGTTAGGTGA...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS-3UTR GCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAAGGGGTCAGAACGACTaGATCCACAGCCACGTCAAG +
Preference number: 4 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGARGQND*IHSHVK
Trigger: CTTGACGTGGCTGTGGATGCAGTCGTTCTGACCCCT...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260282.8
CDS-3UTR GCA 90 bp GGAGACCCACTCTCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGAGGGGTCAGAACGACTaGATCCACAGCCACGTCAAG +
Preference number: 4 (lower is better)
Translates to: GDPLSWHCGSMSGWPCTWRGQND*IHSHVK
Trigger: CTTGACGTGGCTGTGGATGCAGTCGTTCTGACCCCT...CCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR GCA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCGCAGGGACTGTAGTCTaGATCTGGATGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGAGTVV*IWMSWA
Trigger: AGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGC...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp TGGGGCTCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGATCCACCTCTGGCCCTaGCAGGAGCAGTACCACCCC +
Preference number: 4 (lower is better)
Translates to: WGSVAGNSPFLSHRGVSLIHLWP*QEQYHP
Trigger: GGGGTGGTACTGCTCCTGGCAGGGCCAGAGGTGGAT...CAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS-3UTR GCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCTCGCGCGCGTCCTCTaGTCCTCTCTCCTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPLARVL*SSLLSR
Trigger: CCTCGAGAGGAGAGAGGAGCAGAGGACGCGCGCGAG...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATCCTTTTCAGCTGCACTaGCCAGGACCATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SARFGWFPREHRGQEGRDPFQLH*PGPWGP
Trigger: TGGCCCCCATGGTCCTGGCCAGTGCAGCTGAAAAGG...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAAAGGGGCGGGGCAGATaGGGACTCCTCGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: QSHTHTHTHTSREVGRTAKGRGR*GLLVEA
Trigger: GGCTTCCACGAGGAGTCCCCATCTGCCCCGCCCCTT...TGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATTCCATCCCGGTGTGCTaGCCCCAACGGAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: SARFGWFPREHRGQEGRDSIPVC*PQRNRS
Trigger: ACTCCTGTTCCGTTGGGGCCAGCACACCGGGATGGA...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCAGCGCACGGTTTGGTTaGTTTCCGCGGGAACACAGA +
Preference number: 4 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGSARFG*FPREHR
Trigger: TCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGTCACAGCGCACGGTTTaGTTGGTTTCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWSQRTV*LVSAGT
Trigger: TGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGA...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCCTGAGCCACAGAGGCTGCGGGAGCATGTCTaGCTGGCCATGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SMSGWPCTWQQSLPEPQRLREHV*LAMHLA
Trigger: TGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAG...CCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAACGTGCTGCCGTCCGCTaGCTTCTGGGTAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: VPRRLKTTARALTLRIPKRAAVR*LLGSGR
Trigger: GCGGCCGCTACCCAGAAGCCAGCGGACGGCAGCACG...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR TCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCGGGCGGGATCTGGGTTaGGTTCCCACTCTCGTTATG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCGRDLG*VPTLVM
Trigger: CATAACGAGAGTGGGAACTCAACCCAGATCCCGCCC...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCGAAGACCACTGCCCGTaGTCTTACCCTACGCATCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCEDHCP*SYPTHP
Trigger: GGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTC...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCGGAAGGGCATAGCCTaGCTGACGTCAACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPRKGIA*LTSTLG
Trigger: GCCCAGCGTTGACGTCAGGCAGGCTATGCCCTTCCG...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCGGGAGTTGCCTCTaGTGCCCATCTAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGCGSCL*CPSKGT
Trigger: CGTCCCCTTAGATGGGCAGCAGAGGCAACTCCCGCA...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATACTGTTCCCAAGGGCTaGACGGAGCCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SARFGWFPREHRGQEGRDTVPKG*TEPAES
Trigger: AGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGT...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CATGCACCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTGTGAGGGGGCAATGCTaGAGAGGCCCTGGAGACCCA +
Preference number: 4 (lower is better)
Translates to: HAPGNSPFLSHRGVSLFPVRGQC*RGPGDP
Trigger: TGGGTCTCCAGGGCCTCTGCAGCATTGCCCCCTCAC...AGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGACACATCACGGGAGGTaGGCAGGACCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPTHHGR*AGPQAA
Trigger: TGCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGT...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGATCAGGGGAGGGGGCTaGTCTCGGGCAACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPIRGGG*SRATSS
Trigger: GCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGAT...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAATCAGGGGAGGGGGCTaGTCTCGGGCAACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPIRGGG*SRATSS
Trigger: GCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGAT...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGCCTCGTGGAAGCCCCTaGGAAGAAATTAACCACGGA +
Preference number: 4 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWPRGSP*EEINHG
Trigger: TCCGTGGTTAATTTCTTCCCAGGGGCTTCCACGAGG...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCAAGGGGCGGGGCAGATaGGGACTCCTCGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTKGRGR*GLLVEA
Trigger: GGCTTCCACGAGGAGTCCCCATCTGCCCCGCCCCTT...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTCCATCCCGGTGTGCTaGCCCCAACGGAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGSIPVC*PQRNRS
Trigger: ACTCCTGTTCCGTTGGGGCCAGCACACCGGGATGGA...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGCCAGCACCAACTCCATaGCGTCTGCACAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQPAPTP*RLHSRS
Trigger: GGACCGGCTGTGCAGACGCCATGGAGTTGGTGCTGG...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526014.6
ENST00000529335.6
ENST00000584394.5
CDS-3UTR CCA 90 bp CAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCACCAGCACCAACTCCATaGCGTCTGCACAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QSHTHTHTHTSREVGRTAPAPTP*RLHSRS
Trigger: GGACCGGCTGTGCAGACGCCATGGAGTTGGTGCTGG...TGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526014.6
ENST00000529335.6
ENST00000584394.5
CDS-3UTR CCA 90 bp TGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCCTTCCCTCTTTTCCACCTaGGCAGGTGGTCACGGACAG +
Preference number: 4 (lower is better)
Translates to: WHCGSMSGWPCTWQQSLPSLFST*AGGHGQ
Trigger: CTGTCCGTGACCACCTGCCCAGGTGGAAAAGAGGGA...AGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR TCA 90 bp GTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGGGGCGGGATCTGGGTTaGGTTCCCACTCTCGTTATG +
Preference number: 4 (lower is better)
Translates to: VTHTHTHTHITGGGQDRRGRDLG*VPTLVM
Trigger: CATAACGAGAGTGGGAACTCAACCCAGATCCCGCCC...CCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCGAAGACCACTGCCCGTaGTCTTACCCTACGCATCCC +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGEDHCP*SYPTHP
Trigger: GGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTC...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCCTTCAACTATTGCCTaGCAGAGACCCAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGPSTIA*QRPNCR
Trigger: CCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCACCTTCAACTATTGCCTaGCAGAGACCCAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLLGAEGDGGPRGQGGAPSTIA*QRPNCR
Trigger: CCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG...TGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCCTGAGCCACAGATGTCTGGCTGGCCATaGACCTGGCAACAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GSMSGWPCTWQQSLPEPQMSGWP*TWQQSL
Trigger: AAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACAT...CTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGCCGTCTCAGATGCTTTaGCTGAAGTTCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWPSQML*LKFSAQ
Trigger: CTGTGCAGAGAACTTCAGCCAAAGCATCTGAGACGG...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCCAGCACCAACTCCATaGCGTCTTCCTCCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPPAPTP*RLPPAL
Trigger: CAAGGCCGGAGGAAGACGCCATGGAGTTGGTGCTGG...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260282.8
CDS-3UTR CCA 90 bp CATGCACCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTCCAGCACCAACTCCATaGCGTCTTCCTCCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HAPGNSPFLSHRGVSLFPPAPTP*RLPPAL
Trigger: CAAGGCCGGAGGAAGACGCCATGGAGTTGGTGCTGG...AGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATCCTCGTGGAAGCCCCTaGGAAGAAATTAACCACGGA +
Preference number: 4 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHPRGSP*EEINHG
Trigger: TCCGTGGTTAATTTCTTCCCAGGGGCTTCCACGAGG...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAAAAGGGGCGGGGCAGATaGGGACTCCTCGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VPRRLKTTARALTLRIPKKGRGR*GLLVEA
Trigger: GGCTTCCACGAGGAGTCCCCATCTGCCCCGCCCCTT...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGTCCATCCCGGTGTGCTaGCCCCAACGGAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPSIPVC*PQRNRS
Trigger: ACTCCTGTTCCGTTGGGGCCAGCACACCGGGATGGA...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCATCCATCCCGGTGTGCTaGCCCCAACGGAACAGGAGT +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPSIPVC*PQRNRS
Trigger: ACTCCTGTTCCGTTGGGGCCAGCACACCGGGATGGA...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTTCACAGCGCACGGTTTaGTTGGTTTCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPSQRTV*LVSAGT
Trigger: TGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGA...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGTACAGAGAACAGCAATaGGTCACAGCGCACGGTTTG +
Preference number: 4 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWYREQQ*VTAHGL
Trigger: CAAACCGTGCGCTGTGACCCATTGCTGTTCTCTGTA...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCCCAGCACCAACTCCATaGCGTCTGCACAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTPAPTP*RLHSRS
Trigger: GGACCGGCTGTGCAGACGCCATGGAGTTGGTGCTGG...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526014.6
ENST00000529335.6
ENST00000584394.5
CDS-3UTR CCA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTCTCCTTTTCAGCACTaGCCAGGACCATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGSPFQH*PGPWGP
Trigger: TGGCCCCCATGGTCCTGGCCAGTGCTGAAAAGGAGA...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529335.6
CDS-3UTR CCA 90 bp TCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTAGCCCCATCCACCTCTaGCCCTGCCAGGAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: SVAGNSPFLSHRGVSLFPSPIHL*PCQEQY
Trigger: GTACTGCTCCTGGCAGGGCCAGAGGTGGATGGGGCT...AGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS-3UTR CCA 90 bp TGGGGCTCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGCTGGGGCTCTGTTGCTaGCAACAGTCCCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: WGSVAGNSPFLSHRGVSLLGLCC*QQSLPE
Trigger: CTCAGGAAGGGACTGTTGCCAGCAACAGAGCCCCAG...CAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS-3UTR CCA 90 bp CATGCACCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTGGAGACCCACTCTCCTaGCACTGCGGGAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: HAPGNSPFLSHRGVSLFPGDPLS*HCGSMS
Trigger: AGACATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCC...AGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGGTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584230.1
3UTR CAA 72 bp ACAGAGAACAGCAATGGGTCACAGCGCACGGTTTGGTaGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: TENSNGSQRTVW*VSAGTQRTGGA
Trigger: CGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGACCCATTGCTGTTCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCCATGGAGTTATTGCTaGGAAGATATGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGPWSYC*EDMQGT
Trigger: TGTCCCCTGCATATCTTCTCAGCAATAACTCCATGG...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGGGCGGGATCTGGGTTaGGTTCCCACTCTCGTTATG +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQGRDLG*VPTLVM
Trigger: CATAACGAGAGTGGGAACTCAACCCAGATCCCGCCC...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTATAGATCTGCTGCCTTaGACCCCCTTTTCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPIDLLP*TPFSSP
Trigger: GGGGCTTGAAAAGGGGGTTCAAGGCAGCAGATCTAT...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000527717.5
CDS-3UTR GCA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGCTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCACGACTGAAGACCACTaGCCGTGCTCTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGTTEDH*PCSYPT
Trigger: CGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGT...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGGCAGGGACTGTAGTCTaGATCTGGATGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VTHTHTHTHITGGGQDRRAGTVV*IWMSWA
Trigger: AGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGC...CCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCTGCGGGAGTTGCCTCTaGTGCCCATCTAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTCGSCL*CPSKGT
Trigger: CGTCCCCTTAGATGGGCAGCAGAGGCAACTCCCGCA...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGCGTCCTCCCGCTCTGTaGTCGCGCGCGTCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLRPPAL*SRASSA
Trigger: AGCAGAGGACGCGCGCGAGCACAGAGCGGGAGGACG...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CCA 90 bp TGGTCTCGGGCAACAAGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGCCTCGTGGAAGCCCCTaGGAAGAAATTAACCACGGA +
Preference number: 4 (lower is better)
Translates to: WSRATSSLLGAEGDGGPRPRGSP*EEINHG
Trigger: TCCGTGGTTAATTTCTTCCCAGGGGCTTCCACGAGG...CCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCTTGTTGCCCGAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGAGCGCACGGTTTGGTTaGTTTCCGCGGGAACACAGA +
Preference number: 4 (lower is better)
Translates to: VTHTHTHTHITGGGQDRRSARFG*FPREHR
Trigger: TCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT...CCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp TGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCCTGAGCCATTCCACCTGGGCAGGTaGTCACGGACAGTTACCATT +
Preference number: 4 (lower is better)
Translates to: CGSMSGWPCTWQQSLPEPFHLGR*SRTVTI
Trigger: AATGGTAACTGTCCGTGACCACCTGCCCAGGTGGAA...TGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS-3UTR CCA 90 bp CAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTCTTTTCCACCTGGGTCCCTCTTTTCCACCTaGGCAGGTGGTCACGGACAG +
Preference number: 4 (lower is better)
Translates to: QSLPEPQRGLSVPSFPPGSLFST*AGGHGQ
Trigger: CTGTCCGTGACCACCTGCCCAGGTGGAAAAGAGGGA...CCCAGGTGGAAAAGAGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524841.5
ENST00000584230.1
CDS-3UTR TCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGCTCAGATGCTTTGGCTaGAGTTCTCTGCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQLRCFG*SSLHSR
Trigger: CCGGCTGTGCAGAGAACTTCAGCCAAAGCATCTGAG...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR TCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATGTCTTCCTCCGGCCTTaGGCAAGCAGCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDVFLRP*ASSRHC
Trigger: GCAGTGGCGGCTGCTTGCTCAAGGCCGGAGGAAGAC...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260282.8
CDS-3UTR TCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATCCATGGAGTTATTGCTaGGAAGATATGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHPWSYC*EDMQGT
Trigger: TGTCCCCTGCATATCTTCTCAGCAATAACTCCATGG...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATTTCCCACTCTCGTTATaGCCTTCAACCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHFPLSL*PSTSHC
Trigger: ACAGTGAGAGGTTGAAGGTCATAACGAGAGTGGGAA...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp TGGGGCTCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGATAGATCTGCTGCCTTaGACCCCCTTTTCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WGSVAGNSPFLSHRGVSLIDLLP*TPFSSP
Trigger: GGGGCTTGAAAAGGGGGTTCAAGGCAGCAGATCTAT...CAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS-3UTR TCA 90 bp TGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTCTTTTCCAGCAACAGTCCCTTCCTaGGCCACAGAGGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: WQQSLPEPQRGLSVPSFPATVPS*ATEGSL
Trigger: GAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGC...TGGAAAAGAGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000524841.5
ENST00000584230.1
CDS-3UTR GCA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATCTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAACGACTGAAGACCACTaGCCGTGCTCTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: QSHTHTHTHTSREVGRTATTEDH*PCSYPT
Trigger: CGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGT...TGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAACGACTGAAGACCACTaGCCGTGCTCTTACCCTACG +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPTTEDH*PCSYPT
Trigger: CGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGT...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCAGGGACTGTAGTCTaGATCTGGATGAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQAGTVV*IWMSWA
Trigger: AGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGC...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAAGAAGCAAAGGCCTCTaGTCTCCCTCCATCCATCCC +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPRSKGL*SPSIHP
Trigger: GGGATGGATGGAGGGAGAGCAGAGGCCTTTGCTTCT...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp TGGTCTCGGGCAACAAGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: WSRATSSLLGAEGDGGPRLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...CCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCTTGTTGCCCGAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGATGGGGACTCCTCGTaGAAGCCCCTGGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: QSHTHTHTHTSREVGRTADGDSS*KPLGRN
Trigger: ATTTCTTCCCAGGGGCTTCCACGAGGAGTCCCCATC...TGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGGATGGGGACTCCTCGTaGAAGCCCCTGGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPDGDSS*KPLGRN
Trigger: ATTTCTTCCCAGGGGCTTCCACGAGGAGTCCCCATC...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAGATGGGGACTCCTCGTaGAAGCCCCTGGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPDGDSS*KPLGRN
Trigger: ATTTCTTCCCAGGGGCTTCCACGAGGAGTCCCCATC...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGAAGGGGCGGGGCAGATaGGGACTCCTCGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLKGRGR*GLLVEA
Trigger: GGCTTCCACGAGGAGTCCCCATCTGCCCCGCCCCTT...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGAGCGCACGGTTTGGTTaGTTTCCGCGGGAACACAGA +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPSARFG*FPREHR
Trigger: TCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGTCACAGCGCACGGTTTaGTTGGTTTCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPSQRTV*LVSAGT
Trigger: TGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGA...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp AGCGCACGGTTTGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGGGGCGGGATCCATGGAGTTATTGCTaGGAAGATATGCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: SARFGWFPREHRGQEGRDPWSYC*EDMQGT
Trigger: TGTCCCCTGCATATCTTCTCAGCAATAACTCCATGG...ATCCCGCCCCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAAGGGCGGGATCTGGGTTaGGTTCCCACTCTCGTTATG +
Preference number: 4 (lower is better)
Translates to: VPRRLKTTARALTLRIPKGRDLG*VPTLVM
Trigger: CATAACGAGAGTGGGAACTCAACCCAGATCCCGCCC...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTCTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCCTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR GCA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAAGAAGACCACTGCCCGTaGTCTTACCCTACGCATCCC +
Preference number: 4 (lower is better)
Translates to: VPRRLKTTARALTLRIPKEDHCP*SYPTHP
Trigger: GGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTC...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VTHTHTHTHITGGGQDRRLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...CCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR CCA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCCAGACTGGGATCAGGTaGGATAAGGAAGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCQTGIR*DKEARF
Trigger: AAACCTTGCTTCCTTATCCCACCTGATCCCAGTCTG...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCACCTCGTGGAAGCCCCTaGGAAGAAATTAACCACGGA +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPPRGSP*EEINHG
Trigger: TCCGTGGTTAATTTCTTCCCAGGGGCTTCCACGAGG...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTACTGTAGTCTGCATCTaGATGAGCTGGGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPTVVCI*MSWAVD
Trigger: ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGT...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTACAGAGAACAGCAATaGGTCACAGCGCACGGTTTG +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGYREQQ*VTAHGL
Trigger: CAAACCGTGCGCTGTGACCCATTGCTGTTCTCTGTA...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGAGCCCCATCCACCTCTaGCCCTGCCAGGAGCAGTAC +
Preference number: 4 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLSPIHL*PCQEQY
Trigger: GTACTGCTCCTGGCAGGGCCAGAGGTGGATGGGGCT...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527717.5
CDS-3UTR CCA 90 bp TGGGGCTCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGCCAGCACCAACTCCATaGCGTCTGAACCATAGATCT +
Preference number: 4 (lower is better)
Translates to: WGSVAGNSPFLSHRGVSLPAPTP*RLNHRS
Trigger: AGATCTATGGTTCAGACGCCATGGAGTTGGTGCTGG...CAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524841.5
3UTR CAA 72 bp CGATACAGAGAACAGCAATGGGTCACAGCGCACGGTTaGGTTGGTTTCCGCGGGAACACAGAGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RYREQQWVTAHG*VGFRGNTEDRR
Trigger: CCTCCTGTCCTCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGACCCATTGCTGTTCTCTGTATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACAGCGGTGGGTGAGGCTTaGGCTGCTTTCCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTAVGEA*AAFPPP
Trigger: GGGAGGCGGGAAAGCAGCTCAAGCCTCACCCACCGC...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260282.8
ENST00000529335.6
ENST00000539526.5
CDS-3UTR TCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACAGGGCAGGGCGGTGGGTaGGGCTTGAGCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTGQGGG*GLSCFP
Trigger: GGGAAAGCAGCTCAAGCCTCACCCACCGCCCTGCCC...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260282.8
ENST00000529335.6
ENST00000539526.5
CDS-3UTR TCA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAACTCAGATGCTTTGGCTaGAGTTCTCTGCACAGCCGG +
Preference number: 4 (lower is better)
Translates to: VPRRLKTTARALTLRIPKLRCFG*SSLHSR
Trigger: CCGGCTGTGCAGAGAACTTCAGCCAAAGCATCTGAG...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR GCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATTGCGGGAGTTGCCTCTaGTGCCCATCTAAGGGGACG +
Preference number: 4 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDCGSCL*CPSKGT
Trigger: CGTCCCCTTAGATGGGCAGCAGAGGCAACTCCCGCA...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCCGTCTCAGATGCTTTaGCTGAAGTTCTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPPSQML*LKFSAQ
Trigger: CTGTGCAGAGAACTTCAGCCAAAGCATCTGAGACGG...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR CCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCATTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR CCA 90 bp GTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGACTGTAGTCTGCATCTaGATGAGCTGGGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: VTHTHTHTHITGGGQDRRTVVCI*MSWAVD
Trigger: ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGT...CCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGTACAGAGAACAGCAATaGGTCACAGCGCACGGTTTG +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQYREQQ*VTAHGL
Trigger: CAAACCGTGCGCTGTGACCCATTGCTGTTCTCTGTA...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGCCAGCACCAACTCCATaGCGTCTGAACCATAGATCT +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQPAPTP*RLNHRS
Trigger: AGATCTATGGTTCAGACGCCATGGAGTTGGTGCTGG...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527717.5
CDS-3UTR CCA 90 bp TCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTTTCCACCTGGGCAGGTaGTCACGGACAGTTACCATT +
Preference number: 4 (lower is better)
Translates to: SVAGNSPFLSHRGVSLFPFHLGR*SRTVTI
Trigger: AATGGTAACTGTCCGTGACCACCTGCCCAGGTGGAA...AGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS-3UTR TCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGTTCCCACTCTCGTTATaGCCTTCAACCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQFPLSL*PSTSHC
Trigger: ACAGTGAGAGGTTGAAGGTCATAACGAGAGTGGGAA...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp CAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCATTCCCACTCTCGTTATaGCCTTCAACCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: QSHTHTHTHTSREVGRTAFPLSL*PSTSHC
Trigger: ACAGTGAGAGGTTGAAGGTCATAACGAGAGTGGGAA...TGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCATGTCCCTCCTTTTTCTaGTTCCCGTCTCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPCPSFF*FPSQML
Trigger: AAGCATCTGAGACGGGAAGCAGAAAAAGGAGGGACA...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR GCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR GCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACAGGCAGGACCGCAGGCTaGAGTGGGGAGGCAAGTGTT +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTGRTAG*SGEASV
Trigger: AACACTTGCCTCCCCACTGCAGCCTGCGGTCCTGCC...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR GCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACGGAAGGGCATAGCCTaGCTGACGTCAACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTRKGIA*LTSTLG
Trigger: GCCCAGCGTTGACGTCAGGCAGGCTATGCCCTTCCG...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCAGAGTCCTTCAACTATTaGCTGCCAGAGACCCAATTG +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPESFNY*LPETQL
Trigger: CAATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTC...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGGAGTCCTTCAACTATTaGCTGCCAGAGACCCAATTG +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPESFNY*LPETQL
Trigger: CAATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTC...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACACATCACGGGAGGTaGGCAGGACCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHTHHGR*AGPQAA
Trigger: TGCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGT...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR CCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACAACACATCACGGGAGGTaGGCAGGACCGCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTTHHGR*AGPQAA
Trigger: TGCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGT...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR CCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACATCAGGGGAGGGGGCTaGTCTCGGGCAACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHIRGGG*SRATSS
Trigger: GCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGAT...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCACAGACTGGGATCAGGTaGGATAAGGAAGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPQTGIR*DKEARF
Trigger: AAACCTTGCTTCCTTATCCCACCTGATCCCAGTCTG...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGACTGTAGTCTGCATCTaGATGAGCTGGGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPTVVCI*MSWAVD
Trigger: ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGT...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGCCACAGATCCATCAGTaGAAAATGCAACCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQPQIHQ*KMQPVP
Trigger: GGGAACTGGTTGCATTTTCCACTGATGGATCTGTGG...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS-3UTR GCA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCTGTCCCTCCTTTTTCTaGTTCCCGTCTCAGATGCTT +
Preference number: 4 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTCPSFF*FPSQML
Trigger: AAGCATCTGAGACGGGAAGCAGAAAAAGGAGGGACA...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR GCA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAACCTTCAACTATTGCCTaGCAGAGACCCAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: VPRRLKTTARALTLRIPKPSTIA*QRPNCR
Trigger: CCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGAGTCCTTCAACTATTaGCTGCCAGAGACCCAATTG +
Preference number: 4 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTESFNY*LPETQL
Trigger: CAATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTC...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACACCATCCATCCCGGTGTaGTGGCCCCAACGGAACAGG +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTPSIPV*WPQRNR
Trigger: CCTGTTCCGTTGGGGCCAGCACACCGGGATGGATGG...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATAGAAGCAAAGGCCTCTaGTCTCCCTCCATCCATCCC +
Preference number: 4 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDRSKGL*SPSIHP
Trigger: GGGATGGATGGAGGGAGAGCAGAGGCCTTTGCTTCT...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCACTGTAGTCTGCATCTaGATGAGCTGGGCTGTAGAT +
Preference number: 4 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTTVVCI*MSWAVD
Trigger: ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGT...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGAGCGCACGGTTTGGTTaGTTTCCGCGGGAACACAGA +
Preference number: 4 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLSARFG*FPREHR
Trigger: TCTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCT...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATTCACAGCGCACGGTTTaGTTGGTTTCCGCGGGAACA +
Preference number: 4 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDSQRTV*LVSAGT
Trigger: TGTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGA...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACCTGGGGCTCTGTTGCTaGGCTTCCTCATCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHLGLCC*ASSSPG
Trigger: CCCAGGAGATGAGGAAGCCCAGCAACAGAGCCCCAG...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529335.6
CDS-3UTR GCA 90 bp TGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTCTTTTCCACTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WQQSLPEPQRGLSVPSFPLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...TGGAAAAGAGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS-3UTR GCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACTGTTCCCAAGGGCTaGACGGAGCCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHTVPKG*TEPAES
Trigger: AGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGT...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATTGCCAGAGACCCAATTaGAGGGACTGTAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDCQRPN*RDCSLH
Trigger: ATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCA...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACAAGAAGCAAAGGCCTCTaGTCTCCCTCCATCCATCCC +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTRSKGL*SPSIHP
Trigger: GGGATGGATGGAGGGAGAGCAGAGGCCTTTGCTTCT...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACGCGCCGGAGCGGATTTaGCATCAGCTGTTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHAPERI*HQLLLF
Trigger: GAAAAGCAACAGCTGATGGCAAATCCGCTCCGGCGC...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATTTAGAGGGGATAGGGTaGGGGACACACAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDLEGIG*GTHKFL
Trigger: CAAGAACTTGTGTGTCCCCCACCCTATCCCCTCTAA...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACGGAGCTGGGCTTCTCTaGTTCAGAGCCTCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHGAGLL*FRASEQ
Trigger: TTGCTCTGAGGCTCTGAACCAGAGAAGCCCAGCTCC...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS-3UTR TCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGTTCCCACTCTCGTTATaGCCTTCAACCTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLFPLSL*PSTSHC
Trigger: ACAGTGAGAGGTTGAAGGTCATAACGAGAGTGGGAA...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATCTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACAAGAAGCAAAGGCCTCTaGTCTCCCTCCATCCATCCC +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTRSKGL*SPSIHP
Trigger: GGGATGGATGGAGGGAGAGCAGAGGCCTTTGCTTCT...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACATTTCTGGGGCTCTGTTaGTGGGCTTCCTCATCTCCT +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTFLGLC*WASSSP
Trigger: AGGAGATGAGGAAGCCCAGCAACAGAGCCCCAGAAA...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529335.6
CDS-3UTR CCA 90 bp CCTTCAACTATTGCCTGCCAGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGCAGACTGGGATCAGGTaGGATAAGGAAGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PSTIACQRPNCRDCSLHLQTGIR*DKEARF
Trigger: AAACCTTGCTTCCTTATCCCACCTGATCCCAGTCTG...CAGATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCAGGCAATAGTTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACAGATGGGGACTCCTCGTaGAAGCCCCTGGGAAGAAAT +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTDGDSS*KPLGRN
Trigger: ATTTCTTCCCAGGGGCTTCCACGAGGAGTCCCCATC...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACATGCCAGAGACCCAATTaGAGGGACTGTAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTCQRPN*RDCSLH
Trigger: ATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCA...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR TCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACATTAAATCACCTAACTTaGAATGATTGCCCGCCCCGC +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTLNHLT*NDCPPR
Trigger: GCGGGGCGGGCAATCATTTCAAGTTAGGTGATTTAA...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS-3UTR GCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACTTCCACCTGATGGCTaGACTTCAGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTLPPDG*TSVLCF
Trigger: AAAGCAGAGAACTGAAGTGCAGCCATCAGGTGGAAG...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000529335.6
ENST00000539526.5
ENST00000584394.5
CDS-3UTR GCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACATGCCAGAGACCCAATTaGAGGGACTGTAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTCQRPN*RDCSLH
Trigger: ATGCAGACTACAGTCCCTGCAATTGGGTCTCTGGCA...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACAGAGTCCTTCAACTATTaGCTGCCAGAGACCCAATTG +
Preference number: 4 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTESFNY*LPETQL
Trigger: CAATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTC...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACATACAGAGAACAGCAATaGGTCACAGCGCACGGTTTG +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTYREQQ*VTAHGL
Trigger: CAAACCGTGCGCTGTGACCCATTGCTGTTCTCTGTA...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR GCA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACCATGGCGTACACAGCTaGGTTTTTCTTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHHGVHS*VFLLQT
Trigger: AGTTTGGAGAAGAAAAACGCAGCTGTGTACGCCATG...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CCA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACATTAAAACAAGTGCTTTaGGTCGACCAGAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTLKQVL*VDQRPQ
Trigger: CTGTGGCCTCTGGTCGACCCAAAGCACTTGTTTTAA...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS GCA 90 bp GCCGCCACTGCACTTCACCTCTCGGCCACCAGGGGTCAGAACGACTaGATCCACAGCCACGTCAAGGCCCAAACCTGCACAGCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: AATALHLSATRGQND*IHSHVKAQTCTAGP
Trigger: GGGACCGGCTGTGCAGGTTTGGGCCTTGACGTGGCTGTGGATGCAGTCGTTCTGACCCCTGGTGGCCGAGAGGTGAAGTGCAGTGGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530956.6
ENST00000584230.1
CDS GCA 90 bp TCCTCTCCCTGTCCGTCCTCCCGCTCTGTGCTCGCGCGCGTCCTCTaGTCCTCTCTCCTCTCGAGGGGCGGAGAGATTTTTCCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: SSPCPSSRSVLARVL*SSLLSRGGEIFPKG
Trigger: GCCCTTTGGAAAAATCTCTCCGCCCCTCGAGAGGAGAGAGGAGCAGAGGACGCGCGCGAGCACAGAGCGGGAGGACGGACAGGGAGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CAA 90 bp TGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCCTGAGCCACGTCTTCCTCCGGCCTaGAGCAAGCAGCCGCCACTG +
Preference number: 5 (lower is better)
Translates to: CGSMSGWPCTWQQSLPEPRLPPA*SKQPPL
Trigger: CAGTGGCGGCTGCTTGCTCAAGGCCGGAGGAAGACG...TGGCTCAGGAAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS CCA 90 bp GAGGATGCGGAGGTCTCTGCTCAGGAGCTCATCAGTCCTGGTCTCTaGGTGGATGGCCCCAGGTGGGCTATCCTGGTGGAAGCAGGAGGC +
Preference number: 5 (lower is better)
Translates to: EDAEVSAQELISPGL*VDGPRWAILVEAGG
Trigger: GCCTCCTGCTTCCACCAGGATAGCCCACCTGGGGCCATCCACCCAGAGACCAGGACTGATGAGCTCCTGAGCAGAGACCTCCGCATCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS-3UTR CAA 90 bp GAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGTGGGGGGCGGGATCTGGGTaGAGTTCCCACTCTCGTTAT +
Preference number: 5 (lower is better)
Translates to: EQKVMEGHGGREEQMAMWGAGSG*SSHSRY
Trigger: ATAACGAGAGTGGGAACTCAACCCAGATCCCGCCCC...CCACATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS GCA 90 bp GCAGGTGACACTAGTAGTAGCCTGTTTGGTGGAGTGAGGGGGCAATaGTGCAGAGGCCCTGGAGACCCACTCTCCTGGCACTGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: AGDTSSSLFGGVRGQ*CRGPGDPLSWHCGS
Trigger: GCTCCCGCAGTGCCAGGAGAGTGGGTCTCCAGGGCCTCTGCAGCATTGCCCCCTCACTCCACCAAACAGGCTACTACTAGTGTCACCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 90 bp TTCCCCAGAGGATGCGGAGGTCTCTGCTCAGGAGCTCATCAGTCCTaGTCTCTGGGTGGATGGCCCCAGGTGGGCTATCCTGGTGGAAGC +
Preference number: 5 (lower is better)
Translates to: FPRGCGGLCSGAHQS*SLGGWPQVGYPGGS
Trigger: GCTTCCACCAGGATAGCCCACCTGGGGCCATCCACCCAGAGACCAGGACTGATGAGCTCCTGAGCAGAGACCTCCGCATCCTCTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS GCA 90 bp GGTGACACTAGTAGTAGCCTGTTTGGTGGAGTGAGGGGGCAATGCTaGAGAGGCCCTGGAGACCCACTCTCCTGGCACTGCGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: GDTSSSLFGGVRGQC*RGPGDPLSWHCGSM
Trigger: CATGCTCCCGCAGTGCCAGGAGAGTGGGTCTCCAGGGCCTCTGCAGCATTGCCCCCTCACTCCACCAAACAGGCTACTACTAGTGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp TGGTCTCGGGCAACAAGCAGCCTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGGCGGGATCTGGGTaGAGTTCCCACTCTCGTTAT +
Preference number: 5 (lower is better)
Translates to: WSRATSSLLGAEGDGGPRGAGSG*SSHSRY
Trigger: ATAACGAGAGTGGGAACTCAACCCAGATCCCGCCCC...CCGTGGCCCTCCATCACCTTCTGCTCCTAGGAGGCTGCTTGTTGCCCGAGACCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCGGGGCGGGATCTGGGTaGAGTTCCCACTCTCGTTAT +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCGAGSG*SSHSRY
Trigger: ATAACGAGAGTGGGAACTCAACCCAGATCCCGCCCC...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS GCA 90 bp CAGTCAAGCTCCGAGAAGCAACAGGAGACTGCCGCCGAGGAGGCGTaGAAGCGCCGGAGCGGATTTGCCATCAGCTGTTGCTTTTCGGTT +
Preference number: 5 (lower is better)
Translates to: QSSSEKQQETAAEEA*KRRSGFAISCCFSV
Trigger: AACCGAAAAGCAACAGCTGATGGCAAATCCGCTCCGGCGCTTGCACGCCTCCTCGGCGGCAGTCTCCTGTTGCTTCTCGGAGCTTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS-3UTR CAA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAACGTCTTCCTCCGGCCTaGAGCAAGCAGCCGCCACTG +
Preference number: 5 (lower is better)
Translates to: VPRRLKTTARALTLRIPKRLPPA*SKQPPL
Trigger: CAGTGGCGGCTGCTTGCTCAAGGCCGGAGGAAGACG...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260282.8
CDS-3UTR CAA 90 bp CTCCTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCGGAGTCCTTCAACTATaGCCTGCCAGAGACCCAATT +
Preference number: 5 (lower is better)
Translates to: LLGAEGDGGPRGQGGADGGVLQL*PARDPI
Trigger: AATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCC...GCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGCAGCGCACGGTTTGGTaGGTTTCCGCGGGAACACAG +
Preference number: 5 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQQRTVW*VSAGTQ
Trigger: CTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCTG...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp TCCTGGCACTGCGGGAGCATGTCTGGCTGGCCATGCACCTGGCAACAGTCCCTTCACGGACAGTTACCATaGGCGGTGATGAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SWHCGSMSGWPCTWQQSLHGQLP*AVMRFS
Trigger: GGAGAACCTCATCACCGCCAATGGTAACTGTCCGTG...AAGGGACTGTTGCCAGGTGCATGGCCAGCCAGACATGCTCCCGCAGTGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584230.1
CDS CCA 90 bp GTTGCACTTGGGATGACGCCCTATGCACTCGGCCAGTGGGCTGTGTaGAAGCCCCATTTCCTGGTGTTGGCATGCATGTGTGTGGGACAC +
Preference number: 5 (lower is better)
Translates to: VALGMTPYALGQWAV*KPHFLVLACMCVGH
Trigger: GTGTCCCACACACATGCATGCCAACACCAGGAAATGGGGCTTCCACACAGCCCACTGGCCGAGTGCATAGGGCGTCATCCCAAGTGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGTGGGGCTCTGTTGCATaGGCGGTGATGAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQWGSVA*AVMRFS
Trigger: GGAGAACCTCATCACCGCCAATGCAACAGAGCCCCA...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260282.8
ENST00000524656.5
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp CTAGGAGCAGAAGGTGATGGAGGGCCACGGGGGCAGGGAGGAGCAGATGGCCATGGAGTCCTTCAACTATaGCCTGCCAGAGACCCAATT +
Preference number: 5 (lower is better)
Translates to: LGAEGDGGPRGQGGADGHGVLQL*PARDPI
Trigger: AATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCC...ATGGCCATCTGCTCCTCCCTGCCCCCGTGGCCCTCCATCACCTTCTGCTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp CAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCACTTTCTGGGGCTCTGTaGCTGGGCTTCCTCATCTCC +
Preference number: 5 (lower is better)
Translates to: QSHTHTHTHTSREVGRTALSGAL*LGFLIS
Trigger: GGAGATGAGGAAGCCCAGCAACAGAGCCCCAGAAAG...TGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529335.6
CDS CCA 90 bp GGGCTGTGTGGAAGCCCCATTTCCTGGTGTTGGCATGCATGTGTGTaGGACACTTCGGGTGTTTCTAGTCCTGGTCTCTCTCACAGCCCC +
Preference number: 5 (lower is better)
Translates to: GLCGSPISWCWHACV*DTSGVSSPGLSHSP
Trigger: GGGGCTGTGAGAGAGACCAGGACTAGAAACACCCGAAGTGTCCCACACACATGCATGCCAACACCAGGAAATGGGGCTTCCACACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAAGTCACAGCGCACGGTTaGGTTGGTTTCCGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: VPRRLKTTARALTLRIPKVTAHG*VGFRGN
Trigger: GTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGAC...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp TCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTCTTTCTGGGGCTCTGTaGCTGGCAACAGTCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SVAGNSPFLSHRGVSLFPLSGAL*LATVPS
Trigger: GGAAGGGACTGTTGCCAGCAACAGAGCCCCAGAAAG...AGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS-3UTR CAA 90 bp CAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAAGCGCCGGAGCGGATTaGCCATCAGCTGTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: QSHTHTHTHTSREVGRTASAGAD*PSAVAF
Trigger: AAAAGCAACAGCTGATGGCAAATCCGCTCCGGCGCT...TGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS TCA 90 bp CCAACAGCAGCCGTGTCTCTGCCTGACTCTGGGGGAGCAAAGAGGTaGCGGGCATGGGATTTCGAGTCAGAACGATCTGGGTTCAATCCT +
Preference number: 5 (lower is better)
Translates to: PTAAVSLPDSGGAKR*RAWDFESERSGFNP
Trigger: AGGATTGAACCCAGATCGTTCTGACTCGAAATCCCATGCCCGTCACCTCTTTGCTCCCCCAGAGTCAGGCAGAGACACGGCTGCTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS GCA 90 bp TCTCCACAAAGGAATTCCAGAGGAGCAGGGCCCATTAAACAGAGATaGCTAGAGGTGCACGGTAGGGCGGGCCTGCCAGTTAGGGGGTTA +
Preference number: 5 (lower is better)
Translates to: SPQRNSRGAGPIKQR*LEVHGRAGLPVRGL
Trigger: TAACCCCCTAACTGGCAGGCCCGCCCTACCGTGCACCTCTAGGCATCTCTGTTTAATGGGCCCTGCTCCTCTGGAATTCCTTTGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000583233.5
ENST00000583660.5
CDS CCA 90 bp TTCTCCCATGTTGCACTTGGGATGACGCCCTATGCACTCGGCCAGTaGGCTGTGTGGAAGCCCCATTTCCTGGTGTTGGCATGCATGTGT +
Preference number: 5 (lower is better)
Translates to: FSHVALGMTPYALGQ*AVWKPHFLVLACMC
Trigger: ACACATGCATGCCAACACCAGGAAATGGGGCTTCCACACAGCCCACTGGCCGAGTGCATAGGGCGTCATCCCAAGTGCAACATGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCCCGTCTCAGATGCTTaGGCTGAAGTTCTCTGCACA +
Preference number: 5 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPPVSDA*AEVLCT
Trigger: TGTGCAGAGAACTTCAGCCAAAGCATCTGAGACGGG...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR CAA 90 bp GACCTTCAACCTCTCACTGTTCCCAAGGGCTGCACGGAGCCTGCTGAGTCTCCACCCGTCTCAGATGCTTaGGCTGAAGTTCTCTGCACA +
Preference number: 5 (lower is better)
Translates to: DLQPLTVPKGCTEPAESPPVSDA*AEVLCT
Trigger: TGTGCAGAGAACTTCAGCCAAAGCATCTGAGACGGG...TGGAGACTCAGCAGGCTCCGTGCAGCCCTTGGGAACAGTGAGAGGTTGAAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260282.8
ENST00000539526.5
CDS-3UTR CAA 90 bp CACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCTGCCACCAGCTCCTTGCTTaGTATCTCCAGTTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTSREVGRTAGCHQLLA*YLQLLR
Trigger: TCTTAGCAACTGGAGATACAAAGCAAGGAGCTGGTG...GCAGCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp TCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGCGGAGTCCTTCAACTATaGCCTGCCAGAGACCCAATT +
Preference number: 5 (lower is better)
Translates to: SHTHTHTHTSREVGRTAGGVLQL*PARDPI
Trigger: AATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCC...GCCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAAGGGGCGGGATCTGGGTaGAGTTCCCACTCTCGTTAT +
Preference number: 5 (lower is better)
Translates to: VPRRLKTTARALTLRIPKGAGSG*SSHSRY
Trigger: ATAACGAGAGTGGGAACTCAACCCAGATCCCGCCCC...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp TCTGTTGCTGGCAACAGTCCCTTCCTGAGCCACAGAGGGGTCTCTCTGTTCCCTCACGGACAGTTACCATaGGCGGTGATGAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: SVAGNSPFLSHRGVSLFPHGQLP*AVMRFS
Trigger: GGAGAACCTCATCACCGCCAATGGTAACTGTCCGTG...AGGGAACAGAGAGACCCCTCTGTGGCTCAGGAAGGGACTGTTGCCAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524841.5
CDS CCA 90 bp GGGAGCAAAGAGGTGACGGGCATGGGATTTCGAGTCAGAACGATCTaGGTTCAATCCTGGCCCTGCTACTTGCTGCTTACAGGAACCTGG +
Preference number: 5 (lower is better)
Translates to: GSKEVTGMGFRVRTI*VQSWPCYLLLTGTW
Trigger: CCAGGTTCCTGTAAGCAGCAAGTAGCAGGGCCAGGATTGAACCCAGATCGTTCTGACTCGAAATCCCATGCCCGTCACCTCTTTGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp CCCTACGCATCCCTAAATCAGGGGAGGGGGCTGGTCTCGGGCAACAAGCAGCCTGCTTTGTATCTCCAGTaGCTAAGAGACCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: PYASLNQGRGLVSGNKQPALYLQ*LRDLQT
Trigger: AGTCTGAAGGTCTCTTAGCAACTGGAGATACAAAGC...AGGCTGCTTGTTGCCCGAGACCAGCCCCCTCCCCTGATTTAGGGATGCGTAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp AGAGACCCAATTGCAGGGACTGTAGTCTGCATCTGGATGAGCTGGGCTGTAGATGTCACAGCGCACGGTTaGGTTGGTTTCCGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: RDPIAGTVVCIWMSWAVDVTAHG*VGFRGN
Trigger: GTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGAC...ATCTACAGCCCAGCTCATCCAGATGCAGACTACAGTCCCTGCAATTGGGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS GCA 90 bp CCTCTCCAGGAGAGGGACCAACCAGGCTCTCACACTGTCCCCACCTaGTTAGCAGCCTCAGTCATTGCTCTTAACAGAGTGAGCAAAAGA +
Preference number: 5 (lower is better)
Translates to: PLQERDQPGSHTVPT*LAASVIALNRVSKR
Trigger: TCTTTTGCTCACTCTGTTAAGAGCAATGACTGAGGCTGCTAAGCAGGTGGGGACAGTGTGAGAGCCTGGTTGGTCCCTCTCCTGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534125.1
CDS-3UTR CAA 90 bp GTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGGGCTTTGTATCTCCAGTaGCTAAGAGACCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: VTHTHTHTHITGGGQDRRALYLQ*LRDLQT
Trigger: AGTCTGAAGGTCTCTTAGCAACTGGAGATACAAAGC...CCTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp AGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGCAGCACCAGCTCCTTGCTTaGTATCTCCAGTTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: SHTHTHTHTHHGRWAGPQHQLLA*YLQLLR
Trigger: TCTTAGCAACTGGAGATACAAAGCAAGGAGCTGGTG...CTGCGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp CACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCGGCTTTGTATCTCCAGTaGCTAAGAGACCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: HSHTHTHTHTHHGRWAGPALYLQ*LRDLQT
Trigger: AGTCTGAAGGTCTCTTAGCAACTGGAGATACAAAGC...CGGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp ACACAGTCACACACACACACACACACACACACATCACGGGAGGTGGGCAGGACCCACCAGCTCCTTGCTTaGTATCTCCAGTTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: TQSHTHTHTHTSREVGRTHQLLA*YLQLLR
Trigger: TCTTAGCAACTGGAGATACAAAGCAAGGAGCTGGTG...GGTCCTGCCCACCTCCCGTGATGTGTGTGTGTGTGTGTGTGTGTGTGACTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp CCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACGTCACAGCGCACGGTTaGGTTGGTTTCCGCGGGAAC +
Preference number: 5 (lower is better)
Translates to: PQRPQLANTHSHTHTHTHVTAHG*VGFRGN
Trigger: GTTCCCGCGGAAACCAACCAAACCGTGCGCTGTGAC...GTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS GCA 90 bp GATTTCGAGTCAGAACGATCTGGGTTCAATCCTGGCCCTGCTACTTaGTGCTTACAGGAACCTGGTAACCTCTCTCAGTCCCTCGGTTAC +
Preference number: 5 (lower is better)
Translates to: DFESERSGFNPGPAT*CLQEPGNLSQSLGY
Trigger: GTAACCGAGGGACTGAGAGAGGTTACCAGGTTCCTGTAAGCAGCAAGTAGCAGGGCCAGGATTGAACCCAGATCGTTCTGACTCGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 90 bp GAGATTAGGAGCATTTCACTAACTCTAATTCTCCCATGTTGCACTTaGGATGACGCCCTATGCACTCGGCCAGTGGGCTGTGTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: EIRSISLTLILPCCT*DDALCTRPVGCVEA
Trigger: GGCTTCCACACAGCCCACTGGCCGAGTGCATAGGGCGTCATCCCAAGTGCAACATGGGAGAATTAGAGTTAGTGAAATGCTCCTAATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACACAGCGCACGGTTTGGTaGGTTTCCGCGGGAACACAG +
Preference number: 5 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTQRTVW*VSAGTQ
Trigger: CTGTGTTCCCGCGGAAACCAACCAAACCGTGCGCTG...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS GCA 90 bp TTCGAGTCAGAACGATCTGGGTTCAATCCTGGCCCTGCTACTTGCTaGTTACAGGAACCTGGTAACCTCTCTCAGTCCCTCGGTTACAAA +
Preference number: 5 (lower is better)
Translates to: FESERSGFNPGPATC*LQEPGNLSQSLGYK
Trigger: TTTGTAACCGAGGGACTGAGAGAGGTTACCAGGTTCCTGTAAGCAGCAAGTAGCAGGGCCAGGATTGAACCCAGATCGTTCTGACTCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp GTCCCAAGACGACTGAAGACCACTGCCCGTGCTCTTACCCTACGCATCCCTAAAGCTTTGTATCTCCAGTaGCTAAGAGACCTTCAGACT +
Preference number: 5 (lower is better)
Translates to: VPRRLKTTARALTLRIPKALYLQ*LRDLQT
Trigger: AGTCTGAAGGTCTCTTAGCAACTGGAGATACAAAGC...TTTAGGGATGCGTAGGGTAAGAGCACGGGCAGTGGTCTTCAGTCGTCTTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS TCA 90 bp GCTCTTCCCACAGGCTTTGGTTCAGAATCCTCCAGAAAGGTGGTTTaGTTCTACAAAAGGAGTTTGAAGGCTGGTTCCACGAGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ALPTGFGSESSRKVV*FYKRSLKAGSTSLS
Trigger: GCTGAGGCTCGTGGAACCAGCCTTCAAACTCCTTTTGTAGAATCAAACCACCTTTCTGGAGGATTCTGAACCAAAGCCTGTGGGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS CCA 90 bp CCCATCCTCTTTTTCTGGCAGACTCGAGTGAGTCTGTGTGTGTGGTaGCACTCTGAAAACTGTACAGCATTTGCCAGTTACTACTCTCCT +
Preference number: 5 (lower is better)
Translates to: PILFFWQTRVSLCVW*HSENCTAFASYYSP
Trigger: AGGAGAGTAGTAACTGGCAAATGCTGTACAGTTTTCAGAGTGCCACCACACACACAGACTCACTCGAGTCTGCCAGAAAAAGAGGATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS-3UTR CAA 90 bp GCCACAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACAGGAGTCCTTCAACTATaGCCTGCCAGAGACCCAATT +
Preference number: 5 (lower is better)
Translates to: ATKTTVSKHTQSHTHTHTGVLQL*PARDPI
Trigger: AATTGGGTCTCTGGCAGGCAATAGTTGAAGGACTCC...TGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS CCA 90 bp GTCTTTCCGGCATTTGATGAATCTGTAACAGGAGCTGGGCTTCTCTaGTTCAGAGCCTCAGAGCAAACAAACAACCATCAAGGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: VFPAFDESVTGAGLL*FRASEQTNNHQGLL
Trigger: TAAAAGCCCTTGATGGTTGTTTGTTTGCTCTGAGGCTCTGAACCAGAGAAGCCCAGCTCCTGTTACAGATTCATCAAATGCCGGAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS-3UTR CAA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACACACCAGCTCCTTGCTTaGTATCTCCAGTTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTHQLLA*YLQLLR
Trigger: TCTTAGCAACTGGAGATACAAAGCAAGGAGCTGGTG...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260282.8
ENST00000526014.6
ENST00000527717.5
ENST00000539526.5
CDS-3UTR CAA 90 bp CAAAGACCACAGTTAGCAAACACACACAGTCACACACACACACACACACACACATTTAAAACAAGTGCTTaGGGTCGACCAGAGGCCACA +
Preference number: 5 (lower is better)
Translates to: QRPQLANTHSHTHTHTHTFKTSA*GRPEAT
Trigger: TGTGGCCTCTGGTCGACCCAAAGCACTTGTTTTAAA...TGTGTGTGTGTGTGTGTGTGTGTGACTGTGTGTGTTTGCTAACTGTGGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS TCA 90 bp ACTGTACAGCATTTGCCAGTTACTACTCTCCTGTGCCCCCTACGATaGACAATGGAAATAGATACTAAAATCAGTGCCCTTAAATGTGGA +
Preference number: 5 (lower is better)
Translates to: TVQHLPVTTLLCPLR*TMEIDTKISALKCG
Trigger: TCCACATTTAAGGGCACTGATTTTAGTATCTATTTCCATTGTTCATCGTAGGGGGCACAGGAGAGTAGTAACTGGCAAATGCTGTACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS GCA 90 bp GCCCTAAAGTACTTTCTGAGTCACCACGGAAAGCCATTATCTTTATaGTACTTTGAGATTAGGAGCATTTCACTAACTCTAATTCTCCCA +
Preference number: 5 (lower is better)
Translates to: ALKYFLSHHGKPLSL*YFEIRSISLTLILP
Trigger: TGGGAGAATTAGAGTTAGTGAAATGCTCCTAATCTCAAAGTAGCATAAAGATAATGGCTTTCCGTGGTGACTCAGAAAGTACTTTAGGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 72 bp GGGCTCGGGGACAGCCCACTCCGTGCTGCCGTCCGCTaGCTTCTGGGTAGCGGCCGCGCGCAGACCCCCTCT +
Preference number: 6 (lower is better)
Translates to: GLGDSPLRAAVR*LLGSGRAQTPS
Trigger: AGAGGGGGTCTGCGCGCGGCCGCTACCCAGAAGCCAGCGGACGGCAGCACGGAGTGGGCTGTCCCCGAGCCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS CCA 72 bp GGGACAGCCCACTCCGTGCTGCCGTCCGCTGGCTTCTaGGTAGCGGCCGCGCGCAGACCCCCTCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GTAHSVLPSAGF*VAAARRPPLLL
Trigger: GAGGAGGAGAGGGGGTCTGCGCGCGGCCGCTACCCAGAAGCCAGCGGACGGCAGCACGGAGTGGGCTGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS GCA 72 bp TCCGAGAAGCAACAGGAGACTGCCGCCGAGGAGGCGTaGAAGCGCCGGAGCGGATTTGCCATCAGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: SEKQQETAAEEA*KRRSGFAISCC
Trigger: GCAACAGCTGATGGCAAATCCGCTCCGGCGCTTGCACGCCTCCTCGGCGGCAGTCTCCTGTTGCTTCTCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS GCA 72 bp CAAAGGGCAGTCAAGCTCCGAGAAGCAACAGGAGACTaGCGCCGAGGAGGCGTGCAAGCGCCGGAGCGGATT +
Preference number: 6 (lower is better)
Translates to: QRAVKLREATGD*RRGGVQAPERI
Trigger: AATCCGCTCCGGCGCTTGCACGCCTCCTCGGCGGCAGTCTCCTGTTGCTTCTCGGAGCTTGACTGCCCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539526.5
CDS CCA 72 bp GGATGCGGAGGTCTCTGCTCAGGAGCTCATCAGTCCTaGTCTCTGGGTGGATGGCCCCAGGTGGGCTATCCT +
Preference number: 6 (lower is better)
Translates to: GCGGLCSGAHQS*SLGGWPQVGYP
Trigger: AGGATAGCCCACCTGGGGCCATCCACCCAGAGACCAGGACTGATGAGCTCCTGAGCAGAGACCTCCGCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS GCA 72 bp GCACTTCACCTCTCGGCCACCAGGGGTCAGAACGACTaGATCCACAGCCACGTCAAGGCCCAAACACACAGC +
Preference number: 6 (lower is better)
Translates to: ALHLSATRGQND*IHSHVKAQTHS
Trigger: GCTGTGTGTTTGGGCCTTGACGTGGCTGTGGATGCAGTCGTTCTGACCCCTGGTGGCCGAGAGGTGAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260282.8
CDS GCA 72 bp GCACTTCACCTCTCGGCCACCAGGGGTCAGAACGACTaGATCCACAGCCACGTCAAGGCCCAAACCTGCACA +
Preference number: 6 (lower is better)
Translates to: ALHLSATRGQND*IHSHVKAQTCT
Trigger: TGTGCAGGTTTGGGCCTTGACGTGGCTGTGGATGCAGTCGTTCTGACCCCTGGTGGCCGAGAGGTGAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530956.6
ENST00000584230.1
CDS TCA 72 bp GCCGTGTCTCTGCCTGACTCTGGGGGAGCAAAGAGGTaGCGGGCATGGGATTTCGAGTCAGAACGATCTGGG +
Preference number: 6 (lower is better)
Translates to: AVSLPDSGGAKR*RAWDFESERSG
Trigger: CCCAGATCGTTCTGACTCGAAATCCCATGCCCGTCACCTCTTTGCTCCCCCAGAGTCAGGCAGAGACACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 72 bp GCCACAGAGGGGTCTCTCTGTTCCCTCTTTTCCACCTaGGCAGGTGGTCACGGACAGTTACCATTGGCGGTG +
Preference number: 6 (lower is better)
Translates to: ATEGSLCSLFST*AGGHGQLPLAV
Trigger: CACCGCCAATGGTAACTGTCCGTGACCACCTGCCCAGGTGGAAAAGAGGGAACAGAGAGACCCCTCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524841.5
ENST00000527429.5
ENST00000584230.1
CDS CCA 72 bp GGGATGACGCCCTATGCACTCGGCCAGTGGGCTGTGTaGAAGCCCCATTTCCTGGTGTTGGCATGCATGTGT +
Preference number: 6 (lower is better)
Translates to: GMTPYALGQWAV*KPHFLVLACMC
Trigger: ACACATGCATGCCAACACCAGGAAATGGGGCTTCCACACAGCCCACTGGCCGAGTGCATAGGGCGTCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 72 bp GTTGCACTTGGGATGACGCCCTATGCACTCGGCCAGTaGGCTGTGTGGAAGCCCCATTTCCTGGTGTTGGCA +
Preference number: 6 (lower is better)
Translates to: VALGMTPYALGQ*AVWKPHFLVLA
Trigger: TGCCAACACCAGGAAATGGGGCTTCCACACAGCCCACTGGCCGAGTGCATAGGGCGTCATCCCAAGTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS GCA 72 bp CTAATTCTCCCATGTTGCACTTGGGATGACGCCCTATaGACTCGGCCAGTGGGCTGTGTGGAAGCCCCATTT +
Preference number: 6 (lower is better)
Translates to: LILPCCTWDDAL*TRPVGCVEAPF
Trigger: AAATGGGGCTTCCACACAGCCCACTGGCCGAGTGCATAGGGCGTCATCCCAAGTGCAACATGGGAGAATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS GCA 72 bp GAACGATCTGGGTTCAATCCTGGCCCTGCTACTTGCTaGTTACAGGAACCTGGTAACCTCTCTCAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: ERSGFNPGPATC*LQEPGNLSQSL
Trigger: GAGGGACTGAGAGAGGTTACCAGGTTCCTGTAAGCAGCAAGTAGCAGGGCCAGGATTGAACCCAGATCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 72 bp CAGGGCCAAGAGGTGGCACCCAGGGATAGATTTCAATaGCAGGACACACATCTCACTCCTGGGCTTAAAGGA +
Preference number: 6 (lower is better)
Translates to: QGQEVAPRDRFQ*QDTHLTPGLKG
Trigger: TCCTTTAAGCCCAGGAGTGAGATGTGTGTCCTGCCATTGAAATCTATCCCTGGGTGCCACCTCTTGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS CCA 72 bp GAGGTGACGGGCATGGGATTTCGAGTCAGAACGATCTaGGTTCAATCCTGGCCCTGCTACTTGCTGCTTACA +
Preference number: 6 (lower is better)
Translates to: EVTGMGFRVRTI*VQSWPCYLLLT
Trigger: TGTAAGCAGCAAGTAGCAGGGCCAGGATTGAACCCAGATCGTTCTGACTCGAAATCCCATGCCCGTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 72 bp AATGGGCTAAACCCCACCTGTCCCATCCTCTTTTTCTaGCAGACTCGAGTGAGTCTGTGTGTGTGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: NGLNPTCPILFF*QTRVSLCVWWH
Trigger: GTGCCACCACACACACAGACTCACTCGAGTCTGCCAGAAAAAGAGGATGGGACAGGTGGGGTTTAGCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS TCA 72 bp TTCACTAACTCTAATTCTCCCATGTTGCACTTGGGATaGCGCCCTATGCACTCGGCCAGTGGGCTGTGTGGA +
Preference number: 6 (lower is better)
Translates to: FTNSNSPMLHLG*RPMHSASGLCG
Trigger: TCCACACAGCCCACTGGCCGAGTGCATAGGGCGTCATCCCAAGTGCAACATGGGAGAATTAGAGTTAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS TCA 72 bp CCACCTGTCCCATCCTCTTTTTCTGGCAGACTCGAGTaGGTCTGTGTGTGTGGTGGCACTCTGAAAACTGTA +
Preference number: 6 (lower is better)
Translates to: PPVPSSFSGRLE*VCVCGGTLKTV
Trigger: TACAGTTTTCAGAGTGCCACCACACACACAGACTCACTCGAGTCTGCCAGAAAAAGAGGATGGGACAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS TCA 72 bp GCAGACTCGAGTGAGTCTGTGTGTGTGGTGGCACTCTaGAAACTGTACAGCATTTGCCAGTTACTACTCTCC +
Preference number: 6 (lower is better)
Translates to: ADSSESVCVVAL*KLYSICQLLLS
Trigger: GGAGAGTAGTAACTGGCAAATGCTGTACAGTTTTCAGAGTGCCACCACACACACAGACTCACTCGAGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CAA 90 bp AGCTCTTCCCACAGGCTTTGGTTCAGAATCCTCCAGAAAGGTGGTTaGATTCTACAAAAGGAGTTTGAAGGCTGGTTCCACGAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: SSSHRLWFRILQKGG*ILQKEFEGWFHEPQ
Trigger: CTGAGGCTCGTGGAACCAGCCTTCAAACTCCTTTTGTAGAATCAAACCACCTTTCTGGAGGATTCTGAACCAAAGCCTGTGGGAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS CCA 72 bp CTCAAAAGTCCCCAAGTCAGCTCTTCCCACAGGCTTTaGTTCAGAATCCTCCAGAAAGGTGGTTTGATTCTA +
Preference number: 6 (lower is better)
Translates to: LKSPQVSSSHRL*FRILQKGGLIL
Trigger: TAGAATCAAACCACCTTTCTGGAGGATTCTGAACCAAAGCCTGTGGGAAGAGCTGACTTGGGGACTTTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS CCA 72 bp TTTTTCTGGCAGACTCGAGTGAGTCTGTGTGTGTGGTaGCACTCTGAAAACTGTACAGCATTTGCCAGTTAC +
Preference number: 6 (lower is better)
Translates to: FFWQTRVSLCVW*HSENCTAFASY
Trigger: GTAACTGGCAAATGCTGTACAGTTTTCAGAGTGCCACCACACACACAGACTCACTCGAGTCTGCCAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS CCA 72 bp GTGCTTTGGGTCGACCAGAGGCCACAGATCCATCAGTaGAAAATGCAACCAGTTCCCTCAATTTGCATTTTA +
Preference number: 6 (lower is better)
Translates to: VLWVDQRPQIHQ*KMQPVPSICIL
Trigger: TAAAATGCAAATTGAGGGAACTGGTTGCATTTTCCACTGATGGATCTGTGGCCTCTGGTCGACCCAAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS TCA 72 bp ACAGGCTTTGGTTCAGAATCCTCCAGAAAGGTGGTTTaGTTCTACAAAAGGAGTTTGAAGGCTGGTTCCACG +
Preference number: 6 (lower is better)
Translates to: TGFGSESSRKVV*FYKRSLKAGST
Trigger: CGTGGAACCAGCCTTCAAACTCCTTTTGTAGAATCAAACCACCTTTCTGGAGGATTCTGAACCAAAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS CCA 72 bp GCATTTGATGAATCTGTAACAGGAGCTGGGCTTCTCTaGTTCAGAGCCTCAGAGCAAACAAACAACCATCAA +
Preference number: 6 (lower is better)
Translates to: AFDESVTGAGLL*FRASEQTNNHQ
Trigger: TTGATGGTTGTTTGTTTGCTCTGAGGCTCTGAACCAGAGAAGCCCAGCTCCTGTTACAGATTCATCAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524656.5
CDS CAA 72 bp CACAGGCTTTGGTTCAGAATCCTCCAGAAAGGTGGTTaGATTCTACAAAAGGAGTTTGAAGGCTGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: HRLWFRILQKGG*ILQKEFEGWFH
Trigger: GTGGAACCAGCCTTCAAACTCCTTTTGTAGAATCAAACCACCTTTCTGGAGGATTCTGAACCAAAGCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527053.1
CDS TCA 72 bp CATTTGCCAGTTACTACTCTCCTGTGCCCCCTACGATaGACAATGGAAATAGATACTAAAATCAGTGCCCTT +
Preference number: 6 (lower is better)
Translates to: HLPVTTLLCPLR*TMEIDTKISAL
Trigger: AAGGGCACTGATTTTAGTATCTATTTCCATTGTTCATCGTAGGGGGCACAGGAGAGTAGTAACTGGCAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527429.5
CDS GCA 72 bp TACTTTCTGAGTCACCACGGAAAGCCATTATCTTTATaGTACTTTGAGATTAGGAGCATTTCACTAACTCTA +
Preference number: 6 (lower is better)
Translates to: YFLSHHGKPLSL*YFEIRSISLTL
Trigger: TAGAGTTAGTGAAATGCTCCTAATCTCAAAGTAGCATAAAGATAATGGCTTTCCGTGGTGACTCAGAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527429.5