RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FXYD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000137731

Ensembl transcript IDs: ENST00000260287.2, ENST00000292079.7, ENST00000317594.6, ENST00000514385.1, ENST00000528014.5, ENST00000532119.5, ENST00000534383.5

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCAGGATaGTTGGTCAGGGGCTGCGGAAGCCCCCAGCAAGGCAGGAGTCCC +
Preference number: 1 (lower is better)
Translates to: PIALVQAAVSAVTPG*LVRGCGSPQQGRSP
Trigger: GGGACTCCTGCCTTGCTGGGGGCTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR GCA 90 bp CCTGTACAGATGCAGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTaGTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGG +
Preference number: 1 (lower is better)
Translates to: PVQMQSLGSHCPCSG*CLSSDTRMVGQGLR
Trigger: CCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR CCA 90 bp AAAGGGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTaGGGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACA +
Preference number: 1 (lower is better)
Translates to: KGSKALGLRLYRCSL*GPIALVQAAVSAVT
Trigger: TGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR GCA 90 bp CGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATaGCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAA +
Preference number: 1 (lower is better)
Translates to: RLYYKHEVARGRSWR*HLGVTLSLELPSAQ
Trigger: TTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR TCA 90 bp GAAGCCAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTaGAGCTCATTGTCACATTTCTCTCTGGGGAGCAGTGGGGTGGAA +
Preference number: 1 (lower is better)
Translates to: EANPERFHVVRIRQS*SSLSHFSLGSSGVE
Trigger: TTCCACCCCACTGCTCCCCAGAGAGAAATGTGACAATGAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR TCA 90 bp CCTCTCTCCTGCTGTTCTTTCTCAGCTCACAACTCTGAAATCGGTTaGGAAGCCAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAG +
Preference number: 1 (lower is better)
Translates to: PLSCCSFSAHNSEIG*EANPERFHVVRIRQ
Trigger: CTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTGGCTTCTCAACCGATTTCAGAGTTGTGAGCTGAGAAAGAACAGCAGGAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR CCA 90 bp GGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTCTGGCCCCAGTGCAGTaGGTGGCACCGCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GTRQELAMPPGGHIESGALAPVQ*VAPPRL
Trigger: CAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAG...AGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR GCA 90 bp GGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAAGGTCTAAAGCCCCCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGA +
Preference number: 2 (lower is better)
Translates to: GASFSPSAGSDGDKGLKPPSWPQ*SGWHRR
Trigger: TCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGG...GGGCTTTAGACCTTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR CAA 90 bp GAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATaGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGG +
Preference number: 2 (lower is better)
Translates to: EVARGRSWRCHLGVT*SLELPSAQALAVTG
Trigger: CCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR GCA 90 bp AGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCCCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGA +
Preference number: 2 (lower is better)
Translates to: RQELAMPPGGHIESGASFPSWPQ*SGWHRR
Trigger: TCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGG...GAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR GCA 90 bp ATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGA +
Preference number: 2 (lower is better)
Translates to: IISMRWHEAGVGDATWGSPSWPQ*SGWHRR
Trigger: TCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGG...TGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp GCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCCTGGCCCCAGTGCAGTaGGTGGCACCGCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: AGFIISMRWHEAGVGDATLAPVQ*VAPPRL
Trigger: CAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAG...GGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp CACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGGCTTGGCTTCCCAGCTaGCCCCAGTGCAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: HLGVTLSLELPSAQALAVAWLPS*PQCSGW
Trigger: CCACCCACTGCACTGGGGCCAGCTGGGAAGCCAAGC...CACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp GGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGCTGGCCCCAGTGCAGTaGGTGGCACCGCCGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GFIISMRWHEAGVGDATWLAPVQ*VAPPRL
Trigger: CAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAG...CCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR GCA 90 bp AGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCATGGTTGGTCAGGGGCTaGGGAAGCCCCCAGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SLWGPIALVQAAVSAVTPWLVRG*GSPQQG
Trigger: GCCTTGCTGGGGGCTTCCGCAGCCCCTGACCAACCA...TGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR CCA 90 bp ATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCAGCTTGGCTTCCCAGCTaGCCCCAGTGCAGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: IISMRWHEAGVGDATWGSAWLPS*PQCSGW
Trigger: CCACCCACTGCACTGGGGCCAGCTGGGAAGCCAAGC...TGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp GACGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCAGGCAGGGCCATGCTTaGCTTCCCAGCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: DAGFIISMRWHEAGVGDARQGHA*LPSWPQ
Trigger: CTGGGGCCAGCTGGGAAGCCAAGCATGGCCCTGCCT...GGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp GGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTGGCAGTGACACCAGGATaGTTGGTCAGGGGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: GSACTDAVSGVPLPLFRLAVTPG*LVRGCG
Trigger: TCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGC...CAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR TCA 90 bp GCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCCAAGCGCTGGCAGTaGCGGGGACAAAGGTCTAAA +
Preference number: 2 (lower is better)
Translates to: ARGRSWRCHLGVTLSLELPKRWQ*RGQRSK
Trigger: TTTAGACCTTTGTCCCCGTCACTGCCAGCGCTTGGG...AAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR GCA 90 bp GGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGCCAGAGGCAGGGCCATaGTTGGCTTCCCAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: GFIISMRWHEAGVGDATWPEAGP*LASQLA
Trigger: GGCCAGCTGGGAAGCCAAGCATGGCCCTGCCTCTGG...CCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR GCA 90 bp AGGCAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGCCAGAGGCAGGGCCATaGTTGGCTTCCCAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: RQVREAAVSDAGFIISMRPEAGP*LASQLA
Trigger: GGCCAGCTGGGAAGCCAAGCATGGCCCTGCCTCTGG...CCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp GGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGAGGCAGGGCCATGCTTaGCTTCCCAGCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: GFIISMRWHEAGVGDATWRQGHA*LPSWPQ
Trigger: CTGGGGCCAGCTGGGAAGCCAAGCATGGCCCTGCCT...CCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp CAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGTGGAGGCAGGGCCATGCTTaGCTTCCCAGCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: QVREAAVSDAGFIISMRWRQGHA*LPSWPQ
Trigger: CTGGGGCCAGCTGGGAAGCCAAGCATGGCCCTGCCT...CCACCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR TCA 90 bp GGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGGAAGCCCAACTCTGAAATCGGTTaGGAAGCCAACCCAGAGAGG +
Preference number: 2 (lower is better)
Translates to: GCCLSSDTRMVGQGLRKPNSEIG*EANPER
Trigger: CCTCTCTGGGTTGGCTTCTCAACCGATTTCAGAGTT...GGGCTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR CCA 90 bp GGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTGTGGGGAGCAGTGGGGTaGAAGGTATGGAAACTGCTG +
Preference number: 2 (lower is better)
Translates to: GLKPWGSACTDAVSGVPLWGAVG*KVWKLL
Trigger: CAGCAGTTTCCATACCTTCCACCCCACTGCTCCCCA...CAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR TCA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCCCAAGCGCTGGCAGTaGCGGGGACAAAGGTCTAAA +
Preference number: 2 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHPKRWQ*RGQRSK
Trigger: TTTAGACCTTTGTCCCCGTCACTGCCAGCGCTTGGG...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR TCA 90 bp GGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGGAAGCCCCGGATTCGACAGAGCTaGAGCTCATTGTCACATTTC +
Preference number: 2 (lower is better)
Translates to: GCCLSSDTRMVGQGLRKPRIRQS*SSLSHF
Trigger: GAAATGTGACAATGAGCTTCAGCTCTGTCGAATCCG...GGGCTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR GCA 90 bp CAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGTGGGGCAGGAGTTGGCGATaGCACCTGGGGGTCACATTG +
Preference number: 2 (lower is better)
Translates to: QVREAAVSDAGFIISMRWGRSWR*HLGVTL
Trigger: CAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC...CCACCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR CCA 90 bp GGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTGTGTCACATTTCTCTCTaGGGAGCAGTGGGGTGGAAG +
Preference number: 2 (lower is better)
Translates to: GSACTDAVSGVPLPLFRLCHISL*GAVGWK
Trigger: CTTCCACCCCACTGCTCCCCAGAGAGAAATGTGACA...CAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR TCA 90 bp CAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGTGGACCTGGGGGTCACATTaGGTCTGGAGCTTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: QVREAAVSDAGFIISMRWTWGSH*VWSFLQ
Trigger: CTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGT...CCACCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
3UTR-3UTR TCA 90 bp TCAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGGAAGCTCAGCTCACAACTCTaGAATCGGTTGAGAAGCCAA +
Preference number: 2 (lower is better)
Translates to: SGCCLSSDTRMVGQGLRKLSSQL*NRLRSQ
Trigger: TTGGCTTCTCAACCGATTTCAGAGTTGTGAGCTGAG...CTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR GCA 90 bp TCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCTGTGGCCTCTCTCCTaGTGTTCTTTCTCAGCTCAC +
Preference number: 2 (lower is better)
Translates to: SHCPCSGCCLSSDTRMVGLWPLS*CSFSAH
Trigger: GTGAGCTGAGAAAGAACAGCAGGAGAGAGGCCACAG...ACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR-3UTR CCA 90 bp AGAAGCCAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTGAAGCTCCTCTCTGGGGAGCAGTaGGGTGGAAGGTATGGAAAC +
Preference number: 2 (lower is better)
Translates to: RSQPREVPCSPDSTELKLLSGEQ*GGRYGN
Trigger: GTTTCCATACCTTCCACCCCACTGCTCCCCAGAGAG...GAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR CCA 72 bp GCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGTaGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGG +
Preference number: 3 (lower is better)
Translates to: AVSDAGFIISMR*HEAGVGDATWG
Trigger: CCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR CCA 72 bp AAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTaGGGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCA +
Preference number: 3 (lower is better)
Translates to: KALGLRLYRCSL*GPIALVQAAVS
Trigger: TGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR GCA 72 bp TATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATaGCACCTGGGGGTCACATTGAGTCTGGAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: YKHEVARGRSWR*HLGVTLSLELP
Trigger: AGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
3UTR GCA 72 bp ATGCAGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTaGTGTCTCAGCAGTGACACCAGGATGGTTGGTCAG +
Preference number: 3 (lower is better)
Translates to: MQSLGSHCPCSG*CLSSDTRMVGQ
Trigger: CTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR TCA 72 bp CCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTaGAGCTCATTGTCACATTTCTCTCTGGGGAGCAGT +
Preference number: 3 (lower is better)
Translates to: PERFHVVRIRQS*SSLSHFSLGSS
Trigger: ACTGCTCCCCAGAGAGAAATGTGACAATGAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR TCA 72 bp TGCTGTTCTTTCTCAGCTCACAACTCTGAAATCGGTTaGGAAGCCAACCCAGAGAGGTTCCATGTAGTCCGG +
Preference number: 3 (lower is better)
Translates to: CCSFSAHNSEIG*EANPERFHVVR
Trigger: CCGGACTACATGGAACCTCTCTGGGTTGGCTTCTCAACCGATTTCAGAGTTGTGAGCTGAGAAAGAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR GCA 90 bp GGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGACCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGA +
Preference number: 4 (lower is better)
Translates to: GGTRQELAMPPGGHIESGPSWPQ*SGWHRR
Trigger: TCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGG...TCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGCTGGCCCCAGTGCAGTaGGTGGCACCGCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGHIESGASFSPSAGSDGLAPVQ*VAPPRL
Trigger: CAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAG...CCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp CGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTGGTCCACGTCCCCCTTaGGGCTGCCGCCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: RGRSWRCHLGVTLSLELPGPRPP*GCRPGT
Trigger: GGTACCTGGGCGGCAGCCCCAAGGGGGACGTGGACC...AGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CCA 90 bp CACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGCTGGCCCCAGTGCAGTaGGTGGCACCGCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLGVTLSLELPSAQALAVLAPVQ*VAPPRL
Trigger: CAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAG...CACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGCGTCCCCCTTGGGGCTaGCGCCCAGGTACCACCTGT +
Preference number: 4 (lower is better)
Translates to: HLGVTLSLELPSAQALAVRPPWG*RPGTTC
Trigger: ACAGGTGGTACCTGGGCGGCAGCCCCAAGGGGGACG...CACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR GCA 90 bp GCAAAGGGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCGTCCCCCTTGGGGCTaGCGCCCAGGTACCACCTGT +
Preference number: 4 (lower is better)
Translates to: AKGLKPWGSACTDAVSGVRPPWG*RPGTTC
Trigger: ACAGGTGGTACCTGGGCGGCAGCCCCAAGGGGGACG...GACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCCTTTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR GCA 90 bp GGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGACCAGAGGCAGGGCCATaGTTGGCTTCCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGTRQELAMPPGGHIESGPEAGP*LASQLA
Trigger: GGCCAGCTGGGAAGCCAAGCATGGCCCTGCCTCTGG...TCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAACCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGA +
Preference number: 4 (lower is better)
Translates to: HIESGASFSPSAGSDGDKPSWPQ*SGWHRR
Trigger: TCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGG...TTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp ACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAAGCCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGA +
Preference number: 4 (lower is better)
Translates to: TLSLELPSAQALAVTGTKPSWPQ*SGWHRR
Trigger: TCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGG...CTTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGCCAGAGGCAGGGCCATaGTTGGCTTCCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HLGVTLSLELPSAQALAVPEAGP*LASQLA
Trigger: GGCCAGCTGGGAAGCCAAGCATGGCCCTGCCTCTGG...CACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp GCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCAGAGGCAGGGCCATaGTTGGCTTCCCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ARGRSWRCHLGVTLSLELPEAGP*LASQLA
Trigger: GGCCAGCTGGGAAGCCAAGCATGGCCCTGCCTCTGG...AAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp GGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTGTGGTTGGTCAGGGGCTaGGGAAGCCCCCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: GLKPWGSACTDAVSGVPLWLVRG*GSPQQG
Trigger: GCCTTGCTGGGGGCTTCCGCAGCCCCTGACCAACCA...CAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp CACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAAGGTCCACGTCCCCCTTaGGGCTGCCGCCCAGGTACC +
Preference number: 4 (lower is better)
Translates to: HIESGASFSPSAGSDGDKGPRPP*GCRPGT
Trigger: GGTACCTGGGCGGCAGCCCCAAGGGGGACGTGGACC...TTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CCA 90 bp GACGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCCTGGCCCCAGTGCAGTaGGTGGCACCGCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: DAGFIISMRWHEAGVGDALAPVQ*VAPPRL
Trigger: CAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAG...GGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp CGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTGCTTGGCTTCCCAGCTaGCCCCAGTGCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RGRSWRCHLGVTLSLELPAWLPS*PQCSGW
Trigger: CCACCCACTGCACTGGGGCCAGCTGGGAAGCCAAGC...AGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp GGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGGCAGGAGTTGGCGATaGCACCTGGGGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: GGHIESGASFSPSAGSDGGRSWR*HLGVTL
Trigger: CAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC...CCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCACGAGGCAGGAGTTaGCGATGCCACCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GRSWRCHLGVTLSLELPSARGRS*RCHLGV
Trigger: GACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC...TGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GTCTCTGACGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGGTCCACGTCCCCCTTaGGGCTGCCGCCACCGTCCA +
Preference number: 4 (lower is better)
Translates to: VSDAGFIISMRWHEAGVGGPRPP*GCRHRP
Trigger: TGGACGGTGGCGGCAGCCCCAAGGGGGACGTGGACC...GCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTCAGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000292079.7
CDS-3UTR CCA 90 bp GGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACTGCTTGCCTGGGGCCTaGATGGAGAGTGGCACTCCC +
Preference number: 4 (lower is better)
Translates to: GHIESGASFSPSAGSDGDCLPGA*MESGTP
Trigger: GGGAGTGCCACTCTCCATCCAGGCCCCAGGCAAGCA...GTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS-3UTR TCA 90 bp GGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTCCCAAGCGCTGGCAGTaGCGGGGACAAAGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: GTRQELAMPPGGHIESGAPKRWQ*RGQRSK
Trigger: TTTAGACCTTTGTCCCCGTCACTGCCAGCGCTTGGG...AGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CCAAGCGCTGGCAGTGACGGGGACAAAGGTCTAAAGCCCAGGGAAGAAGGGGAGGGCAGGAGTTGGCGATaGCACCTGGGGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: PSAGSDGDKGLKPREEGEGRSWR*HLGVTL
Trigger: CAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC...CTCCCCTTCTTCCCTGGGCTTTAGACCTTTGTCCCCGTCACTGCCAGCGCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACGCTTGGCTTCCCAGCTaGCCCCAGTGCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHAWLPS*PQCSGW
Trigger: CCACCCACTGCACTGGGGCCAGCTGGGAAGCCAAGC...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACAGGCAGGGCCATGCTTaGCTTCCCAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHRQGHA*LPSWPQ
Trigger: CTGGGGCCAGCTGGGAAGCCAAGCATGGCCCTGCCT...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp ACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAAGAGGCAGGGCCATGCTTaGCTTCCCAGCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TLSLELPSAQALAVTGTKRQGHA*LPSWPQ
Trigger: CTGGGGCCAGCTGGGAAGCCAAGCATGGCCCTGCCT...CTTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACGCACGAGGCAGGAGTTaGCGATGCCACCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHARGRS*RCHLGV
Trigger: GACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GACGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCTGCCTGGGGCCTGGATaGAGAGTGGCACTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: DAGFIISMRWHEAGVGDACLGPG*RVALPL
Trigger: GAGGGGGAGTGCCACTCTCCATCCAGGCCCCAGGCA...GGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS-3UTR TCA 90 bp GGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTACCTGGGGGTCACATTaGGTCTGGAGCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GTRQELAMPPGGHIESGATWGSH*VWSFLQ
Trigger: CTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGT...AGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp GGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGACCTGGGGGTCACATTaGGTCTGGAGCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGHIESGASFSPSAGSDGTWGSH*VWSFLQ
Trigger: CTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGT...CCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp TCTGACGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATCGTCCCCCTTGGGGCTaGCGCCCAGGTACCACCTGT +
Preference number: 4 (lower is better)
Translates to: SDAGFIISMRWHEAGVGDRPPWG*RPGTTC
Trigger: ACAGGTGGTACCTGGGCGGCAGCCCCAAGGGGGACG...ATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CCA 90 bp GGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACCATGGCAGGAGCTGCTaGTTGTGTCCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GHIESGASFSPSAGSDGDHGRSC*LCPGVQ
Trigger: CTGCACTCCTGGACACAACCAGCAGCTCCTGCCATG...GTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CCA 90 bp CAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGTGGGCTTGGCTTCCCAGCTaGCCCCAGTGCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QVREAAVSDAGFIISMRWAWLPS*PQCSGW
Trigger: CCACCCACTGCACTGGGGCCAGCTGGGAAGCCAAGC...CCACCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGCACGAGGCAGGAGTTaGCGATGCCACCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: GFIISMRWHEAGVGDATWARGRS*RCHLGV
Trigger: GACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC...CCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp CCAAGCGCTGGCAGTGACGGGGACAAAGGTCTAAAGCCCAGGGAAGAAGGGGAGATTTCCCCAGGTGAATaGGCTGCCTCCACTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSAGSDGDKGLKPREEGEISPGE*AASTPL
Trigger: GAGGGGAGTGGAGGCAGCCCATTCACCTGGGGAAAT...CTCCCCTTCTTCCCTGGGCTTTAGACCTTTGTCCCCGTCACTGCCAGCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000292079.7
CDS-3UTR CCA 90 bp GGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGATGTCGTTCTGGCAGTTaGCAGAGAGATGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GGTRQELAMPPGGHIESGCRSGS*QRDGEQ
Trigger: CTGCTCCCCATCTCTCTGCCAACTGCCAGAACGACA...TCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS-3UTR CCA 90 bp GGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGGAAGCCCGTGGGGTGGAAGGTATaGAAACTGCTGTTACGGCTC +
Preference number: 4 (lower is better)
Translates to: GCCLSSDTRMVGQGLRKPVGWKV*KLLLRL
Trigger: GAGCCGTAACAGCAGTTTCCATACCTTCCACCCCAC...GGGCTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR TCA 90 bp GGCAGTGACGGGGACAAAGGTCTAAAGCCCAGGGAAGAAGGGGAGGCGCCAGAGGGAAGCAGCGGTCTCTaGCGCCGGCTTTATTATAAG +
Preference number: 4 (lower is better)
Translates to: GSDGDKGLKPREEGEAPEGSSGL*RRLYYK
Trigger: CTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCC...CTCTGGCGCCTCCCCTTCTTCCCTGGGCTTTAGACCTTTGTCCCCGTCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp ACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAAGGGCAGGAGTTGGCGATaGCACCTGGGGGTCACATTG +
Preference number: 4 (lower is better)
Translates to: TLSLELPSAQALAVTGTKGRSWR*HLGVTL
Trigger: CAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC...CTTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGGAAGCCTGTGGCCTCTCTCCTaGTGTTCTTTCTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: QAAVSAVTPGWLVRGCGSLWPLS*CSFSAH
Trigger: GTGAGCTGAGAAAGAACAGCAGGAGAGAGGCCACAG...GCTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR GCA 90 bp GGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTGCTCCGCCTGTACAGATaGAGTCTCTGGGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: GSACTDAVSGVPLPLFRLLRLYR*SLWGPI
Trigger: AATGGGACCCCAGAGACTGCATCTGTACAGGCGGAG...CAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp TCTCTGGGGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCAGGCATGGCAGGAGCTGCTaGTTGTGTCCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SLGSHCPCSGCCLSSDTRHGRSC*LCPGVQ
Trigger: CTGCACTCCTGGACACAACCAGCAGCTCCTGCCATG...CCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp GGGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTCTCTCTGGGGAGCAGTaGGGTGGAAGGTATGGAAAC +
Preference number: 4 (lower is better)
Translates to: GSKALGLRLYRCSLWGPILSGEQ*GGRYGN
Trigger: GTTTCCATACCTTCCACCCCACTGCTCCCCAGAGAG...AATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp AGGCAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGCAGTTGGCAGAGAGATaGGGAGCAGCTGCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQVREAAVSDAGFIISMRQLAER*GAAAGL
Trigger: CAGCCCCGCAGCTGCTCCCCATCTCTCTGCCAACTG...CCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS-3UTR CCA 90 bp GGGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTTGGGGAGCAGTGGGGTaGAAGGTATGGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: GSKALGLRLYRCSLWGPIWGAVG*KVWKLL
Trigger: CAGCAGTTTCCATACCTTCCACCCCACTGCTCCCCA...AATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR TCA 90 bp GGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACGGAAGCAGCGGTCTCTaGCGCCGGCTTTATTATAAG +
Preference number: 4 (lower is better)
Translates to: GHIESGASFSPSAGSDGDGSSGL*RRLYYK
Trigger: CTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCC...GTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp GGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTAGATCAGGCCCCCATTaGGAACGGTCTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: GTRQELAMPPGGHIESGARSGPH*ERSHSH
Trigger: ATGACTATGAGACCGTTCGCAATGGGGGCCTGATCT...AGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTGCCCTTGTTTACAGATGCAGTCTCTaGGGTCCCATTGCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: ALGLRLYRCSLWGPIALVYRCSL*GPIALV
Trigger: AACAAGGGCAATGGGACCCCAGAGACTGCATCTGTA...AACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp CGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGCTTCCTGTGTCGTTCTaGCAGTTGGCAGAGAGATGG +
Preference number: 4 (lower is better)
Translates to: RCHLGVTLSLELPSAQALLPVSF*QLAERW
Trigger: CCATCTCTCTGCCAACTGCCAGAACGACACAGGAAG...CAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS-3UTR CCA 90 bp CAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGTGGGGCCTGGATGGAGAGTaGCACTCCCCCTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: QVREAAVSDAGFIISMRWGLDGE*HSPSSH
Trigger: GTGTGAAGAGGGGGAGTGCCACTCTCCATCCAGGCC...CCACCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS-3UTR GCA 90 bp CGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTAGATCAGGCCCCCATTaGGAACGGTCTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: RGRSWRCHLGVTLSLELPRSGPH*ERSHSH
Trigger: ATGACTATGAGACCGTTCGCAATGGGGGCCTGATCT...AGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp GACGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCGCCTGCGCTTCTTATTaGCCCCACAGCGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: DAGFIISMRWHEAGVGDAACASY*PHSGIF
Trigger: GAAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGC...GGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACGCCTGCGCTTCTTATTaGCCCCACAGCGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHACASY*PHSGIF
Trigger: GAAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGC...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAAGCCTGCGCTTCTTATTaGCCCCACAGCGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: HIESGASFSPSAGSDGDKACASY*PHSGIF
Trigger: GAAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGC...TTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGCATGGCAGGAGCTGCTaGTTGTGTCCAGGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GFIISMRWHEAGVGDATWHGRSC*LCPGVQ
Trigger: CTGCACTCCTGGACACAACCAGCAGCTCCTGCCATG...CCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CCA 90 bp GGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAAGGTCTAAAGCCCATTATAAGCATGAGGTaGCACGAGGCAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GASFSPSAGSDGDKGLKPIISMR*HEAGVG
Trigger: GCCAACTCCTGCCTCGTGCCACCTCATGCTTATAAT...GGGCTTTAGACCTTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp CGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTATTATAAGCATGAGGTaGCACGAGGCAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RGRSWRCHLGVTLSLELPIISMR*HEAGVG
Trigger: GCCAACTCCTGCCTCGTGCCACCTCATGCTTATAAT...AGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CCA 90 bp GGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGAAGGGTCTAAAGCCCTaGGGCTCCGCCTGTACAGAT +
Preference number: 4 (lower is better)
Translates to: GPIALVQAAVSAVTPGWLKGLKP*GSACTD
Trigger: ATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCCTT...CAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR TCA 90 bp GGCAGTGACGGGGACAAAGGTCTAAAGCCCAGGGAAGAAGGGGAGGCGCCAGAGACGGCTCATCTTCATTaGTTTGCCTGCGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GSDGDKGLKPREEGEAPETAHLH*FACASY
Trigger: ATAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGT...CTCTGGCGCCTCCCCTTCTTCCCTGGGCTTTAGACCTTTGTCCCCGTCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp GGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTACGGCTCATCTTCATTaGTTTGCCTGCGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GTRQELAMPPGGHIESGATAHLH*FACASY
Trigger: ATAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGT...AGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACGGCTGTATTTGTACTTaGGCTTGGAGAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHGCICT*AWRGWW
Trigger: CCACCAGCCTCTCCAAGCTCAAGTACAAATACAGCC...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp GGGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTCGGATTCGACAGAGCTaGAGCTCATTGTCACATTTC +
Preference number: 4 (lower is better)
Translates to: GSKALGLRLYRCSLWGPIRIRQS*SSLSHF
Trigger: GAAATGTGACAATGAGCTTCAGCTCTGTCGAATCCG...AATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp AGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCATGTCACATTTCTCTCTaGGGAGCAGTGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLWGPIALVQAAVSAVTPCHISL*GAVGWK
Trigger: CTTCCACCCCACTGCTCCCCAGAGAGAAATGTGACA...TGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp AGCCAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTGAAGCTCATTGCAGTGACACCAGGATaGTTGGTCAGGGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: SQPREVPCSPDSTELKLIAVTPG*LVRGCG
Trigger: TCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGC...AATGAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR TCA 90 bp CGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTACGGCTCATCTTCATTaGTTTGCCTGCGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: RGRSWRCHLGVTLSLELPTAHLH*FACASY
Trigger: ATAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGT...AGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp AGGCAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGGGAAGCAGCGGTCTCTaGCGCCGGCTTTATTATAAG +
Preference number: 4 (lower is better)
Translates to: RQVREAAVSDAGFIISMRGSSGL*RRLYYK
Trigger: CTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCC...CCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp AGGCAGGTGAGGGAAGCAGCGGTCTCTGACGCCGGCTTTATTATAAGCATGAGGGGCTGTATTTGTACTTaGGCTTGGAGAGGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RQVREAAVSDAGFIISMRGCICT*AWRGWW
Trigger: CCACCAGCCTCTCCAAGCTCAAGTACAAATACAGCC...CCTCATGCTTATAATAAAGCCGGCGTCAGAGACCGCTGCTTCCCTCACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp AGAAGCCAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTGAAGCTCTGCCCTTGTTCAGGCTaGTGTCTCAGCAGTGACACC +
Preference number: 4 (lower is better)
Translates to: RSQPREVPCSPDSTELKLCPCSG*CLSSDT
Trigger: GGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCA...GAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTGGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CCA 90 bp ATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCAATTATAAGCATGAGGTaGCACGAGGCAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: IISMRWHEAGVGDATWGSIISMR*HEAGVG
Trigger: GCCAACTCCTGCCTCGTGCCACCTCATGCTTATAAT...TGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp CAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTGAAGCTCATTGTCAAGGCAGGAGTCCCCTaGATAACTGTGGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPREVPCSPDSTELKLIVKAGVP*ITVASL
Trigger: GAGAGAGGCCACAGTTATTCAGGGGACTCCTGCCTT...GACAATGAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR GCA 90 bp CTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGTCATCTTCATTGATTTaGCTGCGCTTCTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: LGVTLSLELPSAQALAVTSSSLI*LRFLLP
Trigger: GGGCAATAAGAAGCGCAGGCAAATCAATGAAGATGA...CGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp CGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGTCATCTTCATTGATTTaGCTGCGCTTCTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: RCHLGVTLSLELPSAQALSSSLI*LRFLLP
Trigger: GGGCAATAAGAAGCGCAGGCAAATCAATGAAGATGA...CAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR GCA 90 bp GGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCATCATCTTCATTGATTTaGCTGCGCTTCTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: GRSWRCHLGVTLSLELPSSSSLI*LRFLLP
Trigger: GGGCAATAAGAAGCGCAGGCAAATCAATGAAGATGA...TGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR TCA 90 bp AAAACAAATGAGACCCGGCTGTATTTGTACTTGAGCTTGGAGAGGCTGGTGGTGACCTGGGGGTCACATTaGGTCTGGAGCTTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KTNETRLYLYLSLERLVVTWGSH*VWSFLQ
Trigger: CTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGT...CACCACCAGCCTCTCCAAGCTCAAGTACAAATACAGCCGGGTCTCATTTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000292079.7
CDS-3UTR TCA 90 bp AGCCAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTGAAGCTCATTAACTCTGAAATCGGTTaGGAAGCCAACCCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQPREVPCSPDSTELKLINSEIG*EANPER
Trigger: CCTCTCTGGGTTGGCTTCTCAACCGATTTCAGAGTT...AATGAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR GCA 90 bp CTCTCTCCTGCTGTTCTTTCTCAGCTCACAACTCTGAAATCGGTTGAGAAGCCAGCCTGCGCTTCTTATTaGCCCCACAGCGGAATCTTC +
Preference number: 4 (lower is better)
Translates to: LSPAVLSQLTTLKSVEKPACASY*PHSGIF
Trigger: GAAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGC...TGGCTTCTCAACCGATTTCAGAGTTGTGAGCTGAGAAAGAACAGCAGGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
3UTR CAA 72 bp AAAACAAATGAGACCCGGCTGTATTTGTACTTGAGCTaGGAGAGGCTGGTGGTGACAGAGGAGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: KTNETRLYLYLS*ERLVVTEEGDR
Trigger: CCTGTCTCCCTCCTCTGTCACCACCAGCCTCTCCAAGCTCAAGTACAAATACAGCCGGGTCTCATTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000292079.7
CDS-3UTR TCA 90 bp TGTGGCCTCTCTCCTGCTGTTCTTTCTCAGCTCACAACTCTGAAATCGGTTGAGCTCAGCTCACAACTCTaGAATCGGTTGAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: CGLSPAVLSQLTTLKSVELSSQL*NRLRSQ
Trigger: TTGGCTTCTCAACCGATTTCAGAGTTGTGAGCTGAG...CTCAACCGATTTCAGAGTTGTGAGCTGAGAAAGAACAGCAGGAGAGAGGCCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR TCA 90 bp GGCCTCTCTCCTGCTGTTCTTTCTCAGCTCACAACTCTGAAATCGGTTGAGAAGACGGCTCATCTTCATTaGTTTGCCTGCGCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GLSPAVLSQLTTLKSVEKTAHLH*FACASY
Trigger: ATAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGT...CTTCTCAACCGATTTCAGAGTTGTGAGCTGAGAAAGAACAGCAGGAGAGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR GCA 90 bp TGTGGCCTCTCTCCTGCTGTTCTTTCTCAGCTCACAACTCTGAAATCGGTTGAGGGAAGGTATGGAAACTaGTGTTACGGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: CGLSPAVLSQLTTLKSVEGRYGN*CYGSSS
Trigger: TGAAGATGAGCCGTAACAGCAGTTTCCATACCTTCC...CTCAACCGATTTCAGAGTTGTGAGCTGAGAAAGAACAGCAGGAGAGAGGCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR GCA 90 bp CTCTCTCCTGCTGTTCTTTCTCAGCTCACAACTCTGAAATCGGTTGAGAAGCCATCATCTTCATTGATTTaGCTGCGCTTCTTATTGCCC +
Preference number: 4 (lower is better)
Translates to: LSPAVLSQLTTLKSVEKPSSSLI*LRFLLP
Trigger: GGGCAATAAGAAGCGCAGGCAAATCAATGAAGATGA...TGGCTTCTCAACCGATTTCAGAGTTGTGAGCTGAGAAAGAACAGCAGGAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CAA 90 bp CACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGGGGTCCACGTCCCCCTaGGGGCTGCCGCCACCGTCC +
Preference number: 5 (lower is better)
Translates to: HLGVTLSLELPSAQALAVGSTSP*GLPPPS
Trigger: GGACGGTGGCGGCAGCCCCAAGGGGGACGTGGACCC...CACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000292079.7
CDS TCA 90 bp CAAAGTGGAGCCCCTTGCTTAGGCCACCTGCCTCCTGTGCCTATGTaGTCAGCTGCCACCCGGCACTGCCCTCCGGGAGCTGCCACGGGC +
Preference number: 5 (lower is better)
Translates to: QSGAPCLGHLPPVPM*SAATRHCPPGAATG
Trigger: GCCCGTGGCAGCTCCCGGAGGGCAGTGCCGGGTGGCAGCTGATCACATAGGCACAGGAGGCAGGTGGCCTAAGCAAGGGGCTCCACTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS GCA 90 bp AGGCGCCAGAGGCAGGGCCATGCTTGGCTTCCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGAGGCTGCTGTTACGGCTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: RRQRQGHAWLPSWPQ*SGWHRRGCCYGSSS
Trigger: TGAAGATGAGCCGTAACAGCAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGGAAGCCAAGCATGGCCCTGCCTCTGGCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
ENST00000534383.5
CDS-3UTR CAA 90 bp CGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGGGTCCACGTCCCCCTaGGGGCTGCCGCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: RCHLGVTLSLELPSAQALGSTSP*GLPPRY
Trigger: GTACCTGGGCGGCAGCCCCAAGGGGGACGTGGACCC...CAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CAA 90 bp CTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGTCCACGTCCCCCTaGGGGCTGCCGCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LGVTLSLELPSAQALAVTGSTSP*GLPPRY
Trigger: GTACCTGGGCGGCAGCCCCAAGGGGGACGTGGACCC...CGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS TCA 90 bp GCTCTCACTTCTGCGGCTCCTCCCGGGCCCACTGGAGGGTGCACTTaGGCAAGCAGGAACCTCACACTGTGCTCCCAGCGAGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: ALTSAAPPGPTGGCT*ASRNLTLCSQRAWH
Trigger: GTGCCAGGCTCGCTGGGAGCACAGTGTGAGGTTCCTGCTTGCTCAAGTGCACCCTCCAGTGGGCCCGGGAGGAGCCGCAGAAGTGAGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS GCA 90 bp AGCCCCTTGCTTAGGCCACCTGCCTCCTGTGCCTATGTGATCAGCTaGCACCCGGCACTGCCCTCCGGGAGCTGCCACGGGCAACATGTG +
Preference number: 5 (lower is better)
Translates to: SPLLRPPASCAYVIS*HPALPSGSCHGQHV
Trigger: CACATGTTGCCCGTGGCAGCTCCCGGAGGGCAGTGCCGGGTGGCAGCTGATCACATAGGCACAGGAGGCAGGTGGCCTAAGCAAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CCA 90 bp TCCCGAAAGCCAGCCTGCTCAGCGGCCTTGAGAAGAGAGGTGCCCTaGTCAGCACCCCTTCCCTGGAGGCCACCCCACTTACTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SRKPACSAALRREVP*SAPLPWRPPHLLRR
Trigger: CCTCCTCAGTAAGTGGGGTGGCCTCCAGGGAAGGGGTGCTGACCAGGGCACCTCTCTTCTCAAGGCCGCTGAGCAGGCTGGCTTTCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS-3UTR CAA 90 bp CGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGGGAGGTGCTGCTaGCCTGGGGCCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: RCHLGVTLSLELPSAQALAGRCC*PGAWME
Trigger: CTCCATCCAGGCCCCAGGCAAGCAGCACCTCCCTGC...CAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CAA 90 bp CACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGGGCACGAGGCAGGAGTaGGCGATGCCACCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: HLGVTLSLELPSAQALAVGTRQE*AMPPGG
Trigger: ACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC...CACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS TCA 90 bp GCCGTCTGCCTCCCGCCCAAGTTCAGACGGTCTAGCAAGATGCATTaGACTCAGGGCGGGTGTGTGCCAGGAGGCCGAGGAGGAACGCTC +
Preference number: 5 (lower is better)
Translates to: AVCLPPKFRRSSKMH*TQGGCVPGGRGGTL
Trigger: GAGCGTTCCTCCTCGGCCTCCTGGCACACACCCGCCCTGAGTTCAATGCATCTTGCTAGACCGTCTGAACTTGGGCGGGAGGCAGACGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS CCA 90 bp GGTCTCATAGTCTCCGGAAAGAGAGGGCAAGAGGAGCGGGATGGGTaGTCTCTCCCAGCAGCTGTCTCTCTCCGCAGCCTGCCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: GLIVSGKRGQEERDG*SLPAAVSLRSLPAA
Trigger: TGCTGCGGGCAGGCTGCGGAGAGAGACAGCTGCTGGGAGAGACCACCCATCCCGCTCCTCTTGCCCTCTCTTTCCGGAGACTATGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS-3UTR CAA 90 bp GGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCAGGGAGGTGCTGCTaGCCTGGGGCCTGGATGGAG +
Preference number: 5 (lower is better)
Translates to: GRSWRCHLGVTLSLELPSAGRCC*PGAWME
Trigger: CTCCATCCAGGCCCCAGGCAAGCAGCACCTCCCTGC...TGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CAA 90 bp TCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTGGGTCCACGTCCCCCTaGGGGCTGCCGCCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SHCPCSGCCLSSDTRMVGGSTSP*GLPPRY
Trigger: GTACCTGGGCGGCAGCCCCAAGGGGGACGTGGACCC...ACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS GCA 90 bp TGGACGCCGTCTGCCTCCCGCCCAAGTTCAGACGGTCTAGCAAGATaGATTGAACTCAGGGCGGGTGTGTGCCAGGAGGCCGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: WTPSASRPSSDGLAR*IELRAGVCQEAEEE
Trigger: TTCCTCCTCGGCCTCCTGGCACACACCCGCCCTGAGTTCAATGCATCTTGCTAGACCGTCTGAACTTGGGCGGGAGGCAGACGGCGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS-3UTR CAA 90 bp GCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTGGCAGGAGCTGCTGGTaGTGTCCAGGAGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: ARGRSWRCHLGVTLSLELGRSCW*CPGVQE
Trigger: CTCCTGCACTCCTGGACACAACCAGCAGCTCCTGCC...AAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CAA 90 bp ATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCAGGCACGAGGCAGGAGTaGGCGATGCCACCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: IISMRWHEAGVGDATWGSGTRQE*AMPPGG
Trigger: ACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC...TGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACGGCACGAGGCAGGAGTaGGCGATGCCACCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHGTRQE*AMPPGG
Trigger: ACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS TCA 90 bp GCCAGGAGCCCCTCCTCCCGGCAAAGGCCCTTGGAAAGATTGAGTTaGAAACACACAGCTGGAGGGGATTCGGCGCAAGCCACGTGCTCC +
Preference number: 5 (lower is better)
Translates to: ARSPSSRQRPLERLS*KHTAGGDSAQATCS
Trigger: GGAGCACGTGGCTTGCGCCGAATCCCCTCCAGCTGTGTGTTTTCAACTCAATCTTTCCAAGGGCCTTTGCCGGGAGGAGGGGCTCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS-3UTR CAA 90 bp TCAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGGAAGGTCTCTGGGGTCCCATaGCCCTTGTTCAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SGCCLSSDTRMVGQGLRKVSGVP*PLFRLL
Trigger: CAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGAC...CTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS GCA 90 bp TTCACTCTCCAAACCCACAGGCAGTCAGTGGGTAGTCCACCTCCCTaGCCCACCAACCGCTTCCCGTCCTTTGGATGTTCGTGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: FTLQTHRQSVGSPPP*PTNRFPSFGCSCGG
Trigger: CCCACCACACGAACATCCAAAGGACGGGAAGCGGTTGGTGGGGCAGGGAGGTGGACTACCCACTGACTGCCTGTGGGTTTGGAGAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 90 bp GGGTGGGCCACAGGTCTGAATACCCCCTCTTCCTGTTTGCCTTGCTaGTGCATCCAAGAGGCTTTGGGAGCCTCCCTCCTCCTGAAAGCC +
Preference number: 5 (lower is better)
Translates to: GWATGLNTPSSCLPC*CIQEALGASLLLKA
Trigger: GGCTTTCAGGAGGAGGGAGGCTCCCAAAGCCTCTTGGATGCAGCAGCAAGGCAAACAGGAAGAGGGGGTATTCAGACCTGTGGCCCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 90 bp TCCCTGCCCCACCAACCGCTTCCCGTCCTTTGGATGTTCGTGTGGTaGGAAGAGCTCTGGAAGGGGAGCCAGAGACCTGCAGTTTACCTC +
Preference number: 5 (lower is better)
Translates to: SLPHQPLPVLWMFVW*EELWKGSQRPAVYL
Trigger: GAGGTAAACTGCAGGTCTCTGGCTCCCCTTCCAGAGCTCTTCCCACCACACGAACATCCAAAGGACGGGAAGCGGTTGGTGGGGCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 90 bp CACACAGCTGGAGGGGATTCGGCGCAAGCCACGTGCTCCCTCTGGTaGTCAGAAAGGGAATTGCGGCCTCAGACGAAGACTGTCATGGTC +
Preference number: 5 (lower is better)
Translates to: HTAGGDSAQATCSLW*SERELRPQTKTVMV
Trigger: GACCATGACAGTCTTCGTCTGAGGCCGCAATTCCCTTTCTGACCACCAGAGGGAGCACGTGGCTTGCGCCGAATCCCCTCCAGCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS-3UTR CAA 90 bp GCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCGGCAGGAGCTGCTGGTaGTGTCCAGGAGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: AGFIISMRWHEAGVGDATGRSCW*CPGVQE
Trigger: CTCCTGCACTCCTGGACACAACCAGCAGCTCCTGCC...GGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260287.2
ENST00000528014.5
CDS-3UTR CAA 90 bp GCCCTGGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTCCCATTGCCCTTGTTTGCCTGCGCTTCTTATaGCCCCCACAGCGGAATCTT +
Preference number: 5 (lower is better)
Translates to: ALGLRLYRCSLWGPIALVCLRFL*PPQRNL
Trigger: AAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGCA...AACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS TCA 90 bp GAAATGTTCACAAGAGTCCTGGTTAGGAAGCAGGTCCCAGGCCTCTaGACACCACCTGGGGCCATGGGGCTCGTTAAGCCTCCGCCTGCA +
Preference number: 5 (lower is better)
Translates to: EMFTRVLVRKQVPGL*TPPGAMGLVKPPPA
Trigger: TGCAGGCGGAGGCTTAACGAGCCCCATGGCCCCAGGTGGTGTTCAGAGGCCTGGGACCTGCTTCCTAACCAGGACTCTTGTGAACATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 90 bp CACTGGAGCAAAGGGTCTAAAGCCCTGGGGCTCCGCCTGTACAGATaGAGTCTCTGGGGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: HWSKGSKALGLRLYR*SLWGPIALVQAAVS
Trigger: TGAGACAGCAGCCTGAACAAGGGCAATGGGACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCCTTTGCTCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 90 bp TCCCTCAAAAGCTTGCAGGCCCAGATGAGGAAGCCAGACGCTAGGTaGTGCCAGAATCCCACAATCCCTCCAGCCTTCGAGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLKSLQAQMRKPDAR*CQNPTIPPAFEASE
Trigger: CTCAGAGGCCTCGAAGGCTGGAGGGATTGTGGGATTCTGGCACCACCTAGCGTCTGGCTTCCTCATCTGGGCCTGCAAGCTTTTGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 90 bp CAACCGCTTCCCGTCCTTTGGATGTTCGTGTGGTGGGAAGAGCTCTaGAAGGGGAGCCAGAGACCTGCAGTTTACCTCTGGCTCCGACTC +
Preference number: 5 (lower is better)
Translates to: QPLPVLWMFVWWEEL*KGSQRPAVYLWLRL
Trigger: GAGTCGGAGCCAGAGGTAAACTGCAGGTCTCTGGCTCCCCTTCCAGAGCTCTTCCCACCACACGAACATCCAAAGGACGGGAAGCGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS-3UTR CAA 90 bp CTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGTGCCTGCGCTTCTTATaGCCCCCACAGCGGAATCTT +
Preference number: 5 (lower is better)
Translates to: LGVTLSLELPSAQALAVTCLRFL*PPQRNL
Trigger: AAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGCA...CGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp CACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGTGCCTGCGCTTCTTATaGCCCCCACAGCGGAATCTT +
Preference number: 5 (lower is better)
Translates to: HLGVTLSLELPSAQALAVCLRFL*PPQRNL
Trigger: AAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGCA...CACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp GCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTTGCCTGCGCTTCTTATaGCCCCCACAGCGGAATCTT +
Preference number: 5 (lower is better)
Translates to: ARGRSWRCHLGVTLSLELCLRFL*PPQRNL
Trigger: AAGATTCCGCTGTGGGGGCAATAAGAAGCGCAGGCA...AAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp AGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCGTGTCGTTCTGGCAGTaGGCAGAGAGATGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: RQELAMPPGGHIESGASFVSFWQ*AERWGA
Trigger: TGCTCCCCATCTCTCTGCCAACTGCCAGAACGACAC...GAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS CCA 90 bp AAACACACAGCTGGAGGGGATTCGGCGCAAGCCACGTGCTCCCTCTaGTGGTCAGAAAGGGAATTGCGGCCTCAGACGAAGACTGTCATG +
Preference number: 5 (lower is better)
Translates to: KHTAGGDSAQATCSL*WSERELRPQTKTVM
Trigger: CATGACAGTCTTCGTCTGAGGCCGCAATTCCCTTTCTGACCACCAGAGGGAGCACGTGGCTTGCGCCGAATCCCCTCCAGCTGTGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 90 bp CTCCCGGCAAAGGCCCTTGGAAAGATTGAGTTGAAAACACACAGCTaGAGGGGATTCGGCGCAAGCCACGTGCTCCCTCTGGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: LPAKALGKIELKTHS*RGFGASHVLPLVVR
Trigger: TCTGACCACCAGAGGGAGCACGTGGCTTGCGCCGAATCCCCTCCAGCTGTGTGTTTTCAACTCAATCTTTCCAAGGGCCTTTGCCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS-3UTR CAA 90 bp AGAAGCCAACCCAGAGAGGTTCCATGTAGTCCGGATTCGACAGAGCTGAAGCTCGGCAGGAGCTGCTGGTaGTGTCCAGGAGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: RSQPREVPCSPDSTELKLGRSCW*CPGVQE
Trigger: CTCCTGCACTCCTGGACACAACCAGCAGCTCCTGCC...GAGCTTCAGCTCTGTCGAATCCGGACTACATGGAACCTCTCTGGGTTGGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CAA 90 bp GCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTGAGACCCGGCTGTATTaGTACTTGAGCTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ARGRSWRCHLGVTLSLELETRLY*YLSLER
Trigger: CCTCTCCAAGCTCAAGTACAAATACAGCCGGGTCTC...AAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS TCA 90 bp CCAATGAGTCCACATTTGGAGTGGGGTGTCACAAGGACTTGGTGCTaGGTTGTAAGTCACCTGGCCTTCCCCTGCCTGGCTCCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: PMSPHLEWGVTRTWC*VVSHLAFPCLAPGL
Trigger: GAGACCAGGAGCCAGGCAGGGGAAGGCCAGGTGACTTACAACTCAGCACCAAGTCCTTGTGACACCCCACTCCAAATGTGGACTCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 90 bp AGTTCAGACGGTCTAGCAAGATGCATTGAACTCAGGGCGGGTGTGTaGCAGGAGGCCGAGGAGGAACGCTCAGCTCTCCAGCTTCTATCT +
Preference number: 5 (lower is better)
Translates to: SSDGLARCIELRAGV*QEAEEERSALQLLS
Trigger: AGATAGAAGCTGGAGAGCTGAGCGTTCCTCCTCGGCCTCCTGGCACACACCCGCCCTGAGTTCAATGCATCTTGCTAGACCGTCTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS-3UTR CAA 90 bp GGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTATTTGTACTTGAGCTaGGAGAGGCTGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: GTRQELAMPPGGHIESGAYLYLS*ERLVVT
Trigger: TGTCACCACCAGCCTCTCCAAGCTCAAGTACAAATA...AGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp AGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCGAGACCCGGCTGTATTaGTACTTGAGCTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: RQELAMPPGGHIESGASFETRLY*YLSLER
Trigger: CCTCTCCAAGCTCAAGTACAAATACAGCCGGGTCTC...GAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS TCA 90 bp TCCAGGCCTGAGTCAGTTCCTGTGACAGGAAGCCTTTGGAGAGTGTaGCTTGAACTTGGCGGGCTCTCACCCCAAATCCAGCCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: SRPESVPVTGSLWRV*LELGGLSPQIQPRK
Trigger: CTTCCTAGGCTGGATTTGGGGTGAGAGCCCGCCAAGTTCAAGTCACACTCTCCAAAGGCTTCCTGTCACAGGAACTGACTCAGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS TCA 90 bp GTCAGCAAGTGCCCCTCTTGGTTTCCAGGCCTGAGTCAGTTCCTGTaGCAGGAAGCCTTTGGAGAGTGTGACTTGAACTTGGCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: VSKCPSWFPGLSQFL*QEAFGECDLNLAGS
Trigger: AGAGCCCGCCAAGTTCAAGTCACACTCTCCAAAGGCTTCCTGTCACAGGAACTGACTCAGGCCTGGAAACCAAGAGGGGCACTTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS-3UTR CAA 90 bp GGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTCTCATCTTCATTGATTaGCCTGCGCTTCTTATTGCC +
Preference number: 5 (lower is better)
Translates to: GTRQELAMPPGGHIESGALIFID*PALLIA
Trigger: GGCAATAAGAAGCGCAGGCAAATCAATGAAGATGAG...AGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp CAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGGTCAGGGGCTGCGGAAGCCTCATCTTCATTGATTaGCCTGCGCTTCTTATTGCC +
Preference number: 5 (lower is better)
Translates to: QAAVSAVTPGWLVRGCGSLIFID*PALLIA
Trigger: GGCAATAAGAAGCGCAGGCAAATCAATGAAGATGAG...GCTTCCGCAGCCCCTGACCAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS-3UTR CAA 90 bp GACGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCCGGCTGTATTTGTACTaGAGCTTGGAGAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: DAGFIISMRWHEAGVGDARLYLY*SLERLV
Trigger: CACCAGCCTCTCCAAGCTCAAGTACAAATACAGCCG...GGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp CACATTGAGTCTGGAGCTTCCTTCAGCCCAAGCGCTGGCAGTGACGGGGACAAACGGCTGTATTTGTACTaGAGCTTGGAGAGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: HIESGASFSPSAGSDGDKRLYLY*SLERLV
Trigger: CACCAGCCTCTCCAAGCTCAAGTACAAATACAGCCG...TTTGTCCCCGTCACTGCCAGCGCTTGGGCTGAAGGAAGCTCCAGACTCAATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp GCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTTACGGCTCATCTTCATaGATTTGCCTGCGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: ARGRSWRCHLGVTLSLELYGSSS*ICLRFL
Trigger: TAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGTA...AAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp TATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATATTTGTACTTGAGCTaGGAGAGGCTGGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: YKHEVARGRSWRCHLGVTYLYLS*ERLVVT
Trigger: TGTCACCACCAGCCTCTCCAAGCTCAAGTACAAATA...TGTGACCCCCAGGTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000292079.7
ENST00000528014.5
CDS GCA 90 bp CCGAGGAGGAACGCTCAGCTCTCCAGCTTCTATCTGCTGCCTTTCTaGCACTCAAGCTATCTTTCTTTGGGGTTAAAGCAGGGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PRRNAQLSSFYLLPF*HSSYLSLGLKQGPP
Trigger: AGGAGGACCCTGCTTTAACCCCAAAGAAAGATAGCTTGAGTGGCAGAAAGGCAGCAGATAGAAGCTGGAGAGCTGAGCGTTCCTCCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS-3UTR CAA 90 bp GGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCACTCATCTTCATTGATTaGCCTGCGCTTCTTATTGCC +
Preference number: 5 (lower is better)
Translates to: GRSWRCHLGVTLSLELPSLIFID*PALLIA
Trigger: GGCAATAAGAAGCGCAGGCAAATCAATGAAGATGAG...TGAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp AGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCCTCATCTTCATTGATTaGCCTGCGCTTCTTATTGCC +
Preference number: 5 (lower is better)
Translates to: RQELAMPPGGHIESGASFLIFID*PALLIA
Trigger: GGCAATAAGAAGCGCAGGCAAATCAATGAAGATGAG...GAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp AGGCAGGAGTTGGCGATGCCACCTGGGGGTCACATTGAGTCTGGAGCTTCCTTCTACGGCTCATCTTCATaGATTTGCCTGCGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: RQELAMPPGGHIESGASFYGSSS*ICLRFL
Trigger: TAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGTA...GAAGGAAGCTCCAGACTCAATGTGACCCCCAGGTGGCATCGCCAACTCCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp CGCCGGCTTTATTATAAGCATGAGGTGGCACGAGGCAGGAGTTGGCGATGCCACTACGGCTCATCTTCATaGATTTGCCTGCGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: RRLYYKHEVARGRSWRCHYGSSS*ICLRFL
Trigger: TAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGTA...GTGGCATCGCCAACTCCTGCCTCGTGCCACCTCATGCTTATAATAAAGCCGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
CDS-3UTR CAA 90 bp GGTCCCATTGCCCTTGTTCAGGCTGCTGTCTCAGCAGTGACACCAGGATGGTTGTACGGCTCATCTTCATaGATTTGCCTGCGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GPIALVQAAVSAVTPGWLYGSSS*ICLRFL
Trigger: TAAGAAGCGCAGGCAAATCAATGAAGATGAGCCGTA...CAACCATCCTGGTGTCACTGCTGAGACAGCAGCCTGAACAAGGGCAATGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS CCA 90 bp GTGCCTCTATCTCCTGCAAAGAAAACTGAATTCCATTTAAGGGTTTaGCCTACACCAATGAGTCCACATTTGGAGTGGGGTGTCACAAGG +
Preference number: 5 (lower is better)
Translates to: VPLSPAKKTEFHLRV*PTPMSPHLEWGVTR
Trigger: CCTTGTGACACCCCACTCCAAATGTGGACTCATTGGTGTAGGCCAAACCCTTAAATGGAATTCAGTTTTCTTTGCAGGAGATAGAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 72 bp AGGCAGGGCCATGCTTGGCTTCCCAGCTGGCCCCAGTaGAGTGGGTGGCACCGCCGAGGCTGCTGTTACGGC +
Preference number: 6 (lower is better)
Translates to: RQGHAWLPSWPQ*SGWHRRGCCYG
Trigger: GCCGTAACAGCAGCCTCGGCGGTGCCACCCACTGCACTGGGGCCAGCTGGGAAGCCAAGCATGGCCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260287.2
ENST00000292079.7
ENST00000528014.5
ENST00000534383.5
CDS TCA 72 bp GCCCCTTGCTTAGGCCACCTGCCTCCTGTGCCTATGTaGTCAGCTGCCACCCGGCACTGCCCTCCGGGAGCT +
Preference number: 6 (lower is better)
Translates to: APCLGHLPPVPM*SAATRHCPPGA
Trigger: AGCTCCCGGAGGGCAGTGCCGGGTGGCAGCTGATCACATAGGCACAGGAGGCAGGTGGCCTAAGCAAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS TCA 72 bp TCTGCGGCTCCTCCCGGGCCCACTGGAGGGTGCACTTaGGCAAGCAGGAACCTCACACTGTGCTCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: SAAPPGPTGGCT*ASRNLTLCSQR
Trigger: TCGCTGGGAGCACAGTGTGAGGTTCCTGCTTGCTCAAGTGCACCCTCCAGTGGGCCCGGGAGGAGCCGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS GCA 72 bp CCCCACAAAGGCAGGCCAATCAGAGCCACCCAGCATTaGACACGCCCGGGCACGCACACCAGCACACTCACC +
Preference number: 6 (lower is better)
Translates to: PHKGRPIRATQH*TRPGTHTSTLT
Trigger: GGTGAGTGTGCTGGTGTGCGTGCCCGGGCGTGTGCAATGCTGGGTGGCTCTGATTGGCCTGCCTTTGTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS CCA 72 bp CCAGCCTGCTCAGCGGCCTTGAGAAGAGAGGTGCCCTaGTCAGCACCCCTTCCCTGGAGGCCACCCCACTTA +
Preference number: 6 (lower is better)
Translates to: PACSAALRREVP*SAPLPWRPPHL
Trigger: TAAGTGGGGTGGCCTCCAGGGAAGGGGTGCTGACCAGGGCACCTCTCTTCTCAAGGCCGCTGAGCAGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CCA 72 bp GCAAGCAGGAACCTCACACTGTGCTCCCAGCGAGCCTaGCACCCCACCGGGCACCCATTCCCACATCCTGCA +
Preference number: 6 (lower is better)
Translates to: ASRNLTLCSQRA*HPTGHPFPHPA
Trigger: TGCAGGATGTGGGAATGGGTGCCCGGTGGGGTGCCAGGCTCGCTGGGAGCACAGTGTGAGGTTCCTGCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CCA 72 bp ACACTGAGGCACCGGCCCCAGCTTCCTGTGTCGTTCTaGCAGTTGGCAGAGAGATGGGGAGCAGCTGCGGGG +
Preference number: 6 (lower is better)
Translates to: TLRHRPQLPVSF*QLAERWGAAAG
Trigger: CCCCGCAGCTGCTCCCCATCTCTCTGCCAACTGCCAGAACGACACAGGAAGCTGGGGCCGGTGCCTCAGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528014.5
CDS CAA 90 bp TGCTCTCACTTCTGCGGCTCCTCCCGGGCCCACTGGAGGGTGCACTaGAGCAAGCAGGAACCTCACACTGTGCTCCCAGCGAGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: CSHFCGSSRAHWRVH*SKQEPHTVLPASLA
Trigger: TGCCAGGCTCGCTGGGAGCACAGTGTGAGGTTCCTGCTTGCTCAAGTGCACCCTCCAGTGGGCCCGGGAGGAGCCGCAGAAGTGAGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS GCA 72 bp GCTCACCCCTCCCTTGGCAACTCCCGAAAGCCAGCCTaGTCAGCGGCCTTGAGAAGAGAGGTGCCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: AHPSLGNSRKPA*SAALRREVPWS
Trigger: TGACCAGGGCACCTCTCTTCTCAAGGCCGCTGAGCAGGCTGGCTTTCGGGAGTTGCCAAGGGAGGGGTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CCA 72 bp GTCTCCGGAAAGAGAGGGCAAGAGGAGCGGGATGGGTaGTCTCTCCCAGCAGCTGTCTCTCTCCGCAGCCTG +
Preference number: 6 (lower is better)
Translates to: VSGKRGQEERDG*SLPAAVSLRSL
Trigger: CAGGCTGCGGAGAGAGACAGCTGCTGGGAGAGACCACCCATCCCGCTCCTCTTGCCCTCTCTTTCCGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CAA 72 bp CTTGGCAACTCCCGAAAGCCAGCCTGCTCAGCGGCCTaGAGAAGAGAGGTGCCCTGGTCAGCACCCCTTCCC +
Preference number: 6 (lower is better)
Translates to: LGNSRKPACSAA*RREVPWSAPLP
Trigger: GGGAAGGGGTGCTGACCAGGGCACCTCTCTTCTCAAGGCCGCTGAGCAGGCTGGCTTTCGGGAGTTGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS TCA 72 bp TTGGCAACTCCCGAAAGCCAGCCTGCTCAGCGGCCTTaGGAAGAGAGGTGCCCTGGTCAGCACCCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: LATPESQPAQRP*EERCPGQHPFP
Trigger: AGGGAAGGGGTGCTGACCAGGGCACCTCTCTTCTCAAGGCCGCTGAGCAGGCTGGCTTTCGGGAGTTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS TCA 72 bp GCTGAGGTGGCAGGAGAGGGAAGAGTAGGGTCCAGCTaGCCCCACAAAGGCAGGCCAATCAGAGCCACCCAG +
Preference number: 6 (lower is better)
Translates to: AEVAGEGRVGSS*PHKGRPIRATQ
Trigger: CTGGGTGGCTCTGATTGGCCTGCCTTTGTGGGGTCAGCTGGACCCTACTCTTCCCTCTCCTGCCACCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS CCA 72 bp GCTGGAGGGGATTCGGCGCAAGCCACGTGCTCCCTCTaGTGGTCAGAAAGGGAATTGCGGCCTCAGACGAAG +
Preference number: 6 (lower is better)
Translates to: AGGDSAQATCSL*WSERELRPQTK
Trigger: CTTCGTCTGAGGCCGCAATTCCCTTTCTGACCACCAGAGGGAGCACGTGGCTTGCGCCGAATCCCCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS TCA 72 bp CTCCCGCCCAAGTTCAGACGGTCTAGCAAGATGCATTaGACTCAGGGCGGGTGTGTGCCAGGAGGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: LPPKFRRSSKMH*TQGGCVPGGRG
Trigger: TCCTCGGCCTCCTGGCACACACCCGCCCTGAGTTCAATGCATCTTGCTAGACCGTCTGAACTTGGGCGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS GCA 72 bp GTGGTGGGAAGAGCTCTGGAAGGGGAGCCAGAGACCTaGAGTTTACCTCTGGCTCCGACTCAGGCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: VVGRALEGEPET*SLPLAPTQAGH
Trigger: ATGGCCAGCCTGAGTCGGAGCCAGAGGTAAACTGCAGGTCTCTGGCTCCCCTTCCAGAGCTCTTCCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 72 bp CAAACCCACAGGCAGTCAGTGGGTAGTCCACCTCCCTaGCCCACCAACCGCTTCCCGTCCTTTGGATGTTCG +
Preference number: 6 (lower is better)
Translates to: QTHRQSVGSPPP*PTNRFPSFGCS
Trigger: CGAACATCCAAAGGACGGGAAGCGGTTGGTGGGGCAGGGAGGTGGACTACCCACTGACTGCCTGTGGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 72 bp TCTGCCTCCCGCCCAAGTTCAGACGGTCTAGCAAGATaGATTGAACTCAGGGCGGGTGTGTGCCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: SASRPSSDGLAR*IELRAGVCQEA
Trigger: GGCCTCCTGGCACACACCCGCCCTGAGTTCAATGCATCTTGCTAGACCGTCTGAACTTGGGCGGGAGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS CCA 72 bp GTTTCCCCTTCACTCTCCAAACCCACAGGCAGTCAGTaGGTAGTCCACCTCCCTGCCCCACCAACCGCTTCC +
Preference number: 6 (lower is better)
Translates to: VSPSLSKPTGSQ*VVHLPAPPTAS
Trigger: GGAAGCGGTTGGTGGGGCAGGGAGGTGGACTACCCACTGACTGCCTGTGGGTTTGGAGAGTGAAGGGGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp GGAGGGGATTCGGCGCAAGCCACGTGCTCCCTCTGGTaGTCAGAAAGGGAATTGCGGCCTCAGACGAAGACT +
Preference number: 6 (lower is better)
Translates to: GGDSAQATCSLW*SERELRPQTKT
Trigger: AGTCTTCGTCTGAGGCCGCAATTCCCTTTCTGACCACCAGAGGGAGCACGTGGCTTGCGCCGAATCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CAA 90 bp CCTGGGGTGGGCCACAGGTCTGAATACCCCCTCTTCCTGTTTGCCTaGCTGCTGCATCCAAGAGGCTTTGGGAGCCTCCCTCCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: PGVGHRSEYPLFLFA*LLHPRGFGSLPPPE
Trigger: TTCAGGAGGAGGGAGGCTCCCAAAGCCTCTTGGATGCAGCAGCAAGGCAAACAGGAAGAGGGGGTATTCAGACCTGTGGCCCACCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CAA 90 bp CTTCTCCTGGGGTGGGCCACAGGTCTGAATACCCCCTCTTCCTGTTaGCCTTGCTGCTGCATCCAAGAGGCTTTGGGAGCCTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLLGWATGLNTPSSC*PCCCIQEALGASLL
Trigger: GAGGAGGGAGGCTCCCAAAGCCTCTTGGATGCAGCAGCAAGGCAAACAGGAAGAGGGGGTATTCAGACCTGTGGCCCACCCCAGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS TCA 72 bp ACAAGAGTCCTGGTTAGGAAGCAGGTCCCAGGCCTCTaGACACCACCTGGGGCCATGGGGCTCGTTAAGCCT +
Preference number: 6 (lower is better)
Translates to: TRVLVRKQVPGL*TPPGAMGLVKP
Trigger: AGGCTTAACGAGCCCCATGGCCCCAGGTGGTGTTCAGAGGCCTGGGACCTGCTTCCTAACCAGGACTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 72 bp AAACACACAGCTGGAGGGGATTCGGCGCAAGCCACGTaGTCCCTCTGGTGGTCAGAAAGGGAATTGCGGCCT +
Preference number: 6 (lower is better)
Translates to: KHTAGGDSAQAT*SLWWSERELRP
Trigger: AGGCCGCAATTCCCTTTCTGACCACCAGAGGGAGCACGTGGCTTGCGCCGAATCCCCTCCAGCTGTGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp ATGAACACCTGGAGAAGGATGGCAGCAACTCCAAAGTaGAGCCCCTTGCTTAGGCCACCTGCCTCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: MNTWRRMAATPK*SPLLRPPASCA
Trigger: GGCACAGGAGGCAGGTGGCCTAAGCAAGGGGCTCCACTTTGGAGTTGCTGCCATCCTTCTCCAGGTGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CCA 72 bp CTCTGGAAGGGGAGCCAGAGACCTGCAGTTTACCTCTaGCTCCGACTCAGGCTGGCCATGTCACTCTGGATA +
Preference number: 6 (lower is better)
Translates to: LWKGSQRPAVYL*LRLRLAMSLWI
Trigger: TATCCAGAGTGACATGGCCAGCCTGAGTCGGAGCCAGAGGTAAACTGCAGGTCTCTGGCTCCCCTTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp CCCGTCCTTTGGATGTTCGTGTGGTGGGAAGAGCTCTaGAAGGGGAGCCAGAGACCTGCAGTTTACCTCTGG +
Preference number: 6 (lower is better)
Translates to: PVLWMFVWWEEL*KGSQRPAVYLW
Trigger: CCAGAGGTAAACTGCAGGTCTCTGGCTCCCCTTCCAGAGCTCTTCCCACCACACGAACATCCAAAGGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp GGCTCTAAGATCACTGGAGCAAAGGGTCTAAAGCCCTaGGGCTCCGCCTGTACAGATGCAGTCTCTGGGGTC +
Preference number: 6 (lower is better)
Translates to: GSKITGAKGLKP*GSACTDAVSGV
Trigger: GACCCCAGAGACTGCATCTGTACAGGCGGAGCCCCAGGGCTTTAGACCCTTTGCTCCAGTGATCTTAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CAA 72 bp GGCCACAGGTCTGAATACCCCCTCTTCCTGTTTGCCTaGCTGCTGCATCCAAGAGGCTTTGGGAGCCTCCCT +
Preference number: 6 (lower is better)
Translates to: GHRSEYPLFLFA*LLHPRGFGSLP
Trigger: AGGGAGGCTCCCAAAGCCTCTTGGATGCAGCAGCAAGGCAAACAGGAAGAGGGGGTATTCAGACCTGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CAA 90 bp GCCTACACCAATGAGTCCACATTTGGAGTGGGGTGTCACAAGGACTaGGTGCTGAGTTGTAAGTCACCTGGCCTTCCCCTGCCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: AYTNESTFGVGCHKD*VLSCKSPGLPLPGS
Trigger: GGAGCCAGGCAGGGGAAGGCCAGGTGACTTACAACTCAGCACCAAGTCCTTGTGACACCCCACTCCAAATGTGGACTCATTGGTGTAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS TCA 72 bp CCACATTTGGAGTGGGGTGTCACAAGGACTTGGTGCTaGGTTGTAAGTCACCTGGCCTTCCCCTGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: PHLEWGVTRTWC*VVSHLAFPCLA
Trigger: AGCCAGGCAGGGGAAGGCCAGGTGACTTACAACTCAGCACCAAGTCCTTGTGACACCCCACTCCAAATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS GCA 72 bp ACAGGTCTGAATACCCCCTCTTCCTGTTTGCCTTGCTaGTGCATCCAAGAGGCTTTGGGAGCCTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: TGLNTPSSCLPC*CIQEALGASLL
Trigger: GAGGAGGGAGGCTCCCAAAGCCTCTTGGATGCAGCAGCAAGGCAAACAGGAAGAGGGGGTATTCAGACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp AATTTTCTTAGAGAGGAGGCCGACAGGAAGAGGGGCTaGGTACTCTGGAAGGCTGAGGTGGCAGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: NFLREEADRKRG*VLWKAEVAGEG
Trigger: TCCCTCTCCTGCCACCTCAGCCTTCCAGAGTACCCAGCCCCTCTTCCTGTCGGCCTCCTCTCTAAGAAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS TCA 72 bp CCTCTGTCAGCAAGTGCCCCTCTTGGTTTCCAGGCCTaGGTCAGTTCCTGTGACAGGAAGCCTTTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: PLSASAPLGFQA*VSSCDRKPLES
Trigger: ACTCTCCAAAGGCTTCCTGTCACAGGAACTGACTCAGGCCTGGAAACCAAGAGGGGCACTTGCTGACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS GCA 72 bp ATAACTCTCTTTGTCTCCCCCAGAACACTCCGAGTCTaGACTGGACCGTTCTCAGAGCGCTGTCCTGACTGC +
Preference number: 6 (lower is better)
Translates to: ITLFVSPRTLRV*TGPFSERCPDC
Trigger: GCAGTCAGGACAGCGCTCTGAGAACGGTCCAGTGCAGACTCGGAGTGTTCTGGGGGAGACAAAGAGAGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS TCA 72 bp GGAAGTGACTCATCCAGAGCAGGTGGAATTTCCCTCTaGGGGTGGCAGGCTGGATTGTCCTCTGTATGGAAC +
Preference number: 6 (lower is better)
Translates to: GSDSSRAGGISL*GWQAGLSSVWN
Trigger: GTTCCATACAGAGGACAATCCAGCCTGCCACCCTCAGAGGGAAATTCCACCTGCTCTGGATGAGTCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS TCA 72 bp GAGTCAGTTCCTGTGACAGGAAGCCTTTGGAGAGTGTaGCTTGAACTTGGCGGGCTCTCACCCCAAATCCAG +
Preference number: 6 (lower is better)
Translates to: ESVPVTGSLWRV*LELGGLSPQIQ
Trigger: CTGGATTTGGGGTGAGAGCCCGCCAAGTTCAAGTCACACTCTCCAAAGGCTTCCTGTCACAGGAACTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS CAA 72 bp CCTGATAAAGCCTCACATTTCACAAGGAGGGAGGCCTaGAGGCAGGGTCAGCGAAGGGAAGTGACTCATCCA +
Preference number: 6 (lower is better)
Translates to: PDKASHFTRREA*RQGQRREVTHP
Trigger: TGGATGAGTCACTTCCCTTCGCTGACCCTGCCTCAAGGCCTCCCTCCTTGTGAAATGTGAGGCTTTATCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS TCA 72 bp TGCCCCTCTTGGTTTCCAGGCCTGAGTCAGTTCCTGTaGCAGGAAGCCTTTGGAGAGTGTGACTTGAACTTG +
Preference number: 6 (lower is better)
Translates to: CPSWFPGLSQFL*QEAFGECDLNL
Trigger: CAAGTTCAAGTCACACTCTCCAAAGGCTTCCTGTCACAGGAACTGACTCAGGCCTGGAAACCAAGAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS CAA 72 bp AATGAGTCCACATTTGGAGTGGGGTGTCACAAGGACTaGGTGCTGAGTTGTAAGTCACCTGGCCTTCCCCTG +
Preference number: 6 (lower is better)
Translates to: NESTFGVGCHKD*VLSCKSPGLPL
Trigger: CAGGGGAAGGCCAGGTGACTTACAACTCAGCACCAAGTCCTTGTGACACCCCACTCCAAATGTGGACTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CAA 90 bp TCTAAGGACCCTTCCCTGCTCAAGCCTTCTGTGTTTCTAGGAGAGTaGGTGGTTATCAGGGACTGGGGGCAGTGGATTAAGACAAAGAGC +
Preference number: 6 (lower is better)
Translates to: SKDPSLLKPSVFLGE*VVIRDWGQWIKTKS
Trigger: GCTCTTTGTCTTAATCCACTGCCCCCAGTCCCTGATAACCACCAACTCTCCTAGAAACACAGAAGGCTTGAGCAGGGAAGGGTCCTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp GCAAATATTTACTGGAGCAGATCCACGGTGGTCTGTTaGCATATCGAGAGTAGCAGCAGAGACTGGGCCATC +
Preference number: 6 (lower is better)
Translates to: ANIYWSRSTVVC*HIESSSRDWAI
Trigger: GATGGCCCAGTCTCTGCTGCTACTCTCGATATGCCAACAGACCACCGTGGATCTGCTCCAGTAAATATTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CCA 72 bp GGGCAGTGGATTAAGACAAAGAGCTTAATTCCCAAGTaGAGTGAGGTCTATCCTGCCTCTGGCCCCCAAACA +
Preference number: 6 (lower is better)
Translates to: GQWIKTKSLIPK*SEVYPASGPQT
Trigger: TGTTTGGGGGCCAGAGGCAGGATAGACCTCACTCCACTTGGGAATTAAGCTCTTTGTCTTAATCCACTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp TTTCTGGAGAGAGAAGGGAAATGTTCACAAGAGTCCTaGTTAGGAAGCAGGTCCCAGGCCTCTGAACACCAC +
Preference number: 6 (lower is better)
Translates to: FLEREGKCSQES*LGSRSQASEHH
Trigger: GTGGTGTTCAGAGGCCTGGGACCTGCTTCCTAACCAGGACTCTTGTGAACATTTCCCTTCTCTCTCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CCA 72 bp GCTCATTGTCACATTTCTCTCTGGGGAGCAGTGGGGTaGAAGGTATGGAAACTGCTGTTACGGCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: AHCHISLWGAVG*KVWKLLLRLIF
Trigger: GAAGATGAGCCGTAACAGCAGTTTCCATACCTTCCACCCCACTGCTCCCCAGAGAGAAATGTGACAATGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532119.5
CDS CCA 72 bp CTCAGTTTCTTCACCATTGAGGTGAAAGAGCTGGGCTaGAATGATCACCAAGATCCCTTCCTAGGACCAAAC +
Preference number: 6 (lower is better)
Translates to: LSFFTIEVKELG*NDHQDPFLGPN
Trigger: GTTTGGTCCTAGGAAGGGATCTTGGTGATCATTCCAGCCCAGCTCTTTCACCTCAATGGTGAAGAAACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CAA 90 bp GGCAGTGGCACACGTGCATTAGAAGTCCAGAGCCCACAGGTGTGCTaGCTGTATCTTCTTTCCATGGGTTGTGTTTTCTGTGTATTTTTC +
Preference number: 6 (lower is better)
Translates to: GSGTRALEVQSPQVC*LYLLSMGCVFCVFF
Trigger: GAAAAATACACAGAAAACACAACCCATGGAAAGAAGATACAGCAAGCACACCTGTGGGCTCTGGACTTCTAATGCACGTGTGCCACTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000317594.6
CDS CCA 72 bp TCTGTGTTTCTAGGAGAGTTGGTGGTTATCAGGGACTaGGGGCAGTGGATTAAGACAAAGAGCTTAATTCCC +
Preference number: 6 (lower is better)
Translates to: SVFLGELVVIRD*GQWIKTKSLIP
Trigger: GGGAATTAAGCTCTTTGTCTTAATCCACTGCCCCCAGTCCCTGATAACCACCAACTCTCCTAGAAACACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514385.1
CDS CAA 72 bp TCTTTCTTTGGGGTTAAAGCAGGGTCCTCCTTTAAGTaGCAAATTTTCTTAGAGAGGAGGCCGACAGGAAGA +
Preference number: 6 (lower is better)
Translates to: SFFGVKAGSSFK*QIFLERRPTGR
Trigger: TCTTCCTGTCGGCCTCCTCTCTAAGAAAATTTGCAACTTAAAGGAGGACCCTGCTTTAACCCCAAAGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534383.5
CDS CAA 72 bp TATCTGCTGCCTTTCTGCCACTCAAGCTATCTTTCTTaGGGGTTAAAGCAGGGTCCTCCTTTAAGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: YLLPFCHSSYLS*GLKQGPPLSCK
Trigger: TTTGCAACTTAAAGGAGGACCCTGCTTTAACCCCAAAGAAAGATAGCTTGAGTGGCAGAAAGGCAGCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534383.5