Pregenerated sensors for FXYD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000266964Ensembl transcript IDs: ENST00000351325.9, ENST00000455515.6, ENST00000587056.1, ENST00000588081.5, ENST00000588607.5, ENST00000588715.5, ENST00000589121.1, ENST00000589209.5, ENST00000590462.1, ENST00000592818.5, ENST00000612146.4
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGTGGCGCTGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTaGTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAG | + |
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Preference number: 1 (lower is better) Translates to: PVALAFRAEGPRPTK*CREERTFYWKSWRQ Trigger: CTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCAGCGCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGTGGCGCTGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTGCTGTCGTGCCAGGGGAGTCCTaGCCGGATTCCATCGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AQWRWRFALRDRDRQSAVVPGES*PDSIAP Trigger: TGGAGCGATGGAATCCGGCCAGGACTCCCCTGGCAC...GACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCAGCGCCACTGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGGTGGGCGCGCAGGTaGAGCGTGGGAGATGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: WRFALRDRDRQSAVERNARWARR*SVGDVR Trigger: CCTGACATCTCCCACGCTCCACCTGCGCGCCCACCG...TGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCGGTGGGCGCGCAGGTaGAGCGTGGGAGATGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: ERNARFIGSLGGRGSLRGRWARR*SVGDVR Trigger: CCTGACATCTCCCACGCTCCACCTGCGCGCCCACCG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGTGGGAGATGTCAGGTaGCAGGGGAGTCCTGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: ERNARFIGSLGGRGSLRGVGDVR*QGSPGR Trigger: CCGGCCAGGACTCCCCTGGCACCTGACATCTCCCAC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| 3UTR-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGCGGTGGGCGCGCAGGTaGAGCGTGGGAGATGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VERNARFIGSLGGRGSLRRWARR*SVGDVR Trigger: CCTGACATCTCCCACGCTCCACCTGCGCGCCCACCG...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| 3UTR-3UTR GCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGTGGGAGATGTCAGGTaGCAGGGGAGTCCTGGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: VERNARFIGSLGGRGSLRVGDVR*QGSPGR Trigger: CCGGCCAGGACTCCCCTGGCACCTGACATCTCCCAC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGTGCCAGGGGAGTCCTaGCCGGATTCCATCGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ERNARFIGSLGGRGSLRGVPGES*PDSIAP Trigger: TGGAGCGATGGAATCCGGCCAGGACTCCCCTGGCAC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 5 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCAGAGCTGCAGCACCTaGCCGGATTCCATCGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ERNARFIGSLGGRGSLRGQSCST*PDSIAP Trigger: TGGAGCGATGGAATCCGGCCAGGTGCTGCAGCTCTG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| 3UTR-3UTR GCA 90 bp | GGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCGTGGGAGATGTCAGGTaGCAGGGGAGTCCTGGCCGG | + |
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Preference number: 2 (lower is better) Translates to: GTETDKVLSRGTHVLLEVVGDVR*QGSPGR Trigger: CCGGCCAGGACTCCCCTGGCACCTGACATCTCCCAC...GACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| 3UTR GCA 72 bp | CGGTGGGCGCGCAGGTGGAGCGTGGGAGATGTCAGGTaGCAGGGGAGTCCTGGCCGGATTCCATCGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RWARRWSVGDVR*QGSPGRIPSLQ Trigger: CTGGAGCGATGGAATCCGGCCAGGACTCCCCTGGCACCTGACATCTCCCACGCTCCACCTGCGCGCCCACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588607.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| 3UTR-3UTR CAA 90 bp | TGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCAGTTTTATTGGAAGTCTaGGCGGCAGGGGGAGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: WRFALRDRDRQSAVERNAVLLEV*AAGGVC Trigger: GCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAAC...TGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| 3UTR GCA 72 bp | CTGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTaGTGTCGAGAGGAACGCACGTTTTATTGGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LAFRAEGPRPTK*CREERTFYWKS Trigger: AGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR GCA 90 bp | CCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCCCGCCGTGTCAGAGCTaGAGCACCTGGCCGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: PPSLPPPCQSCSTWPDSIPPCQS*STWPDS Trigger: GGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGG...GATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCGCTCCGCCGCCCTTCAACTCTaGCACTTGGCCCCCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FPPTAVSELQHLAGFHRSAALQL*HLAPSL Trigger: GAGGGAGGGGGCCAAGTGCCAGAGTTGAAGGGCGGC...GGAGCGATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR TCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGACAGCCCTGCCGGGGTaGGGCCCAGCTGCCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGTALPG*GPAATS Trigger: CGATGTGGCAGCTGGGCCTCACCCCGGCAGGGCTGT...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCGCTCCGGTGTTTCTACCGCCTaGGGGTGGACAGACGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: FPPTAVSELQHLAGFHRSGVSTA*GWTDGG Trigger: TCCGCCGTCTGTCCACCCGCAGGCGGTAGAAACACC...GGAGCGATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGGTCACGCACAGCCCTaGCGGGGTGAGGCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGGHAQP*RGEAQL Trigger: CAGCTGGGCCTCACCCCGGCAGGGCTGTGCGTGACC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGGGGTGAGGCCCAGCTaGCACATCGCCACAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGGVRPS*HIATGC Trigger: GCAGCCTGTGGCGATGTGGCAGCTGGGCCTCACCCC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 64% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCCTCTGGGCCTCCGGTaGCCCCACGCAGTGACGCAA | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGPLGLR*PHAVTQ Trigger: TTGCGTCACTGCGTGGGGGCACCGGAGGCCCAGAGG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCGCTCCGTGGGAGATGTCAGGTaGCAGGGGAGTCCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPPTAVSELQHLAGFHRSVGDVR*QGSPVR Trigger: CCTCACAGGACTCCCCTGGCACCTGACATCTCCCAC...GGAGCGATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR TCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGAGAGGTAGGAGAAGCTaGGGCTCCCTCCCGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRRGRRS*GSLPAG Trigger: GCCCGCCGGGAGGGAGCCTCAGCTTCTCCTACCTCT...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589121.1 |
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| CDS-3UTR GCA 90 bp | CCCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: PSFPPTAVSELQHLAGFHDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...ATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCACACCCTGCCAGGGTaGACACGCACCAGCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGHTLPG*TRTSRA Trigger: TGCCCTGCTGGTGCGTGTGCACCCTGGCAGGGTGTG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | CCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCTGGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PPSLPPPCQSCSTWPDSIWTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCCA...GATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGTCTACCGCCTGCGGGTaGACAGACGGCGGATGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGSTACG*TDGGWS Trigger: GCTCCATCCGCCGTCTGTCCACCCGCAGGCGGTAGA...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR TCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGTGCCCCCACGCAGTaGCGCAACCAGCCCTACACA | + |
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Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRGAPTQ*RNQPYT Trigger: TGTGTAGGGCTGGTTGCGTCACTGCGTGGGGGCACC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR GCA 90 bp | CCCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATGGTTCCCCAGTCCTCTaGTGCTGGTTGAACTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSFPPTAVSELQHLAGFHGSPVL*CWLNLH Trigger: GTGCAAGTTCAACCAGCAGCAGAGGACTGGGGAACC...ATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR GCA 90 bp | TGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCAGGTGTTTCTACCGCCTaGGGGTGGACAGACGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: WRFALRDRDRQSAVERNAGVSTA*GWTDGG Trigger: TCCGCCGTCTGTCCACCCGCAGGCGGTAGAAACACC...TGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGGTGTTTCTACCGCCTaGGGGTGGACAGACGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGGVSTA*GWTDGG Trigger: TCCGCCGTCTGTCCACCCGCAGGCGGTAGAAACACC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCCCAACTCCACACCCTaGCAGGGTGCACACGCACCA | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGPNSTP*QGAHAP Trigger: TGGTGCGTGTGCACCCTGGCAGGGTGTGGAGTTGGG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | CCCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCCAGTCCTCTGCTGCTaGTTGAACTTGCACCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PSFPPTAVSELQHLAGFHPVLCC*LNLHRH Trigger: ATGCCGGTGCAAGTTCAACCAGCAGCAGAGGACTGG...ATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR CCA 90 bp | TGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCAGTGCCAGGGGAGTCCTaGCCGGATTCCATCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WRFALRDRDRQSAVERNAVPGES*PDSIAP Trigger: TGGAGCGATGGAATCCGGCCAGGACTCCCCTGGCAC...TGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCACAGGCTGCCCCTGTaGGAAAGGTCACCCCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGHRLPL*ERSPRL Trigger: GAGACGGGGTGACCTTTCCCACAGGGGCAGCCTGTG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGTCGCTCAGGCCACCATaGCAACAGCCTGCCTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGSLRPP*QQPAFP Trigger: GGGGAAGGCAGGCTGTTGCCATGGTGGCCTGAGCGA...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGCCAATACTCCTCCTCTaGGCCTCCGGTGCCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRPILLL*ASGAPT Trigger: CGTGGGGGCACCGGAGGCCCAGAGGAGGAGTATTGG...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGAGACGCCATTGTCCCTaGCAGGGCAGAGGAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGRRHCP*QGRGGA Trigger: AGCGCCTCCTCTGCCCTGCCAGGGACAATGGCGTCT...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000588715.5 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGTTCAACTCTGGCACTTaGCCCCCTCCCTCTCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGFNSGT*PPPSPA Trigger: GGCGGGAGAGGGAGGGGGCCAAGTGCCAGAGTTGAA...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCACATCGCCACAGGCTaGCCCTGTGGGAAAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGHIATG*PCGKGH Trigger: GTGACCTTTCCCACAGGGGCAGCCTGTGGCGATGTG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGTGCCAGGGGAGTCCTaGCCGGATTCCATCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRVPGES*PDSIAP Trigger: TGGAGCGATGGAATCCGGCCAGGACTCCCCTGGCAC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR GCA 90 bp | TTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCGCTCCTTCCTTTGGACTTTCTaGCTTGGCCATGGTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FPPTAVSELQHLAGFHRSFLWTF*LGHGEE Trigger: CTCCTCACCATGGCCAAGGCAGAAAGTCCAAAGGAA...GGAGCGATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR GCA 90 bp | TGGCGTTTCGCGCTGAGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCAGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: WRFALRDRDRQSAVERNADGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...TGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGTCCCTGGAGGAATTCTaGTCGCTCAGGCCACCATGG | + |
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Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGSLEEF*SLRPPW Trigger: CCATGGTGGCCTGAGCGAGCAGAATTCCTCCAGGGA...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGTCCTCTCCCCAAACTaGTGGTTGGAGCAGGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGVLSPN*WLEQDV Trigger: CACGTCCTGCTCCAACCAGCAGTTTGGGGAGAGGAC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000612146.4 |
||
| CDS-3UTR GCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGTGCACCGGCATCTTCTaGCTGTGGGCGTGGAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRCTGIF*LWAWRG Trigger: ACCTCTCCACGCCCACAGGCAGAAGATGCCGGTGCA...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589121.1 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGTGGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGWTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCCA...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | AGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTTCTACCGCCTGCGGGTaGACAGACGGCGGATGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVERNARFIGSLGGRGSSTACG*TDGGWS Trigger: GCTCCATCCGCCGTCTGTCCACCCGCAGGCGGTAGA...ACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR CCA 90 bp | AGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTGGGGCCCAGTGGCGCTaGCGTTTCGCGCTGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDRDRQSAVERNARFIGSGAQWR*RFALRD Trigger: GTCCCTCAGCGCGAAACGCCAGCGCCACTGGGCCCC...ACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGGTTGGAGCAGGACGTaGGGTGTAAACACCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGGWSRT*GVNTVR Trigger: CCTGACGGTGTTTACACCCCACGTCCTGCTCCAACC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000612146.4 |
||
| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGCTCTCCCCAAACTGCTaGTTGGAGCAGGACGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRLSPNC*LEQDVG Trigger: CCCCACGTCCTGCTCCAACCAGCAGTTTGGGGAGAG...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000612146.4 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCGGGCTGTCCCCTGCTaGAAGAAGGCCCCCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVERNARFIGSLGGRGSRAVPC*KKAPKR Trigger: ACGTTTGGGGGCCTTCTTTCAGCAGGGGACAGCCCG...ACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGTCCTCTGCTGCTGGTTaGACTTGCACCGGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGSSAAG*TCTGIF Trigger: GAAGATGCCGGTGCAAGTTCAACCAGCAGCAGAGGA...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
||
| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGGTTCCCCAGTCCTCTaGTGCTGGTTGAACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGGSPVL*CWLNLH Trigger: GTGCAAGTTCAACCAGCAGCAGAGGACTGGGGAACC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 59% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
||
| CDS-3UTR GCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRDGGWS*GKFPPL Trigger: AAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
||
| CDS-3UTR GCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGCCGAGACCGACAAAGTaGTGTCGAGAGGAACGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRPRPTK*CREERT Trigger: CGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGG...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR GCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGACCCACATCCCACCCTaGAGAACCCACTGCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRTHIPP*RTHCLN Trigger: GTTGAGGCAGTGGGTTCTGCAGGGTGGGATGTGGGT...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | CCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCCAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSLPPPCQSCSTWPDSIQKTKM*PRDAIV Trigger: GACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTG...GATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588081.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCCAGTCCTCTGCTGCTaGTTGAACTTGCACCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGPVLCC*LNLHRH Trigger: ATGCCGGTGCAAGTTCAACCAGCAGCAGAGGACTGG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGCCCCAAACTGCTGGTTaGAGCAGGACGTGGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRPQTAG*SRTWGV Trigger: TACACCCCACGTCCTGCTCCAACCAGCAGTTTGGGG...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGCATCTTCTGCCTGTaGGCGTGGAGAGGTAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRGIFCL*AWRGRR Trigger: TCTCCTACCTCTCCACGCCCACAGGCAGAAGATGCC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000589121.1 |
||
| CDS-3UTR TCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGTCCTCTGCTGCTGGTTaGACTTGCACCGGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRSSAAG*TCTGIF Trigger: GAAGATGCCGGTGCAAGTTCAACCAGCAGCAGAGGA...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR TCA 90 bp | GACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGCTGGCGTTTCGCGCTaGGGGACCGAGACCGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: DKVLSRGTHVLLEVLAAGAGVSR*GTETDK Trigger: TTTGTCGGTCTCGGTCCCTCAGCGCGAAACGCCAGC...CCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR GCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGTTCCCCAGTCCTCTaGTGCTGGTTGAACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRGSPVL*CWLNLH Trigger: GTGCAAGTTCAACCAGCAGCAGAGGACTGGGGAACC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGCCAGTCCTCTGCTGCTaGTTGAACTTGCACCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRPVLCC*LNLHRH Trigger: ATGCCGGTGCAAGTTCAACCAGCAGCAGAGGACTGG...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTCGGTGGGCGCGCAGGTaGAGCGTGGGAGATGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DRDRQSAVERNARFIGSLRWARR*SVGDVR Trigger: CCTGACATCTCCCACGCTCCACCTGCGCGCCCACCG...AAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGAACGCACGTTTTATTaGAAGTCTTGGCGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGERTFY*KSWRQG Trigger: CCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGAGACGCCATTGTCCCTaGAGGAATTCTGCTCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGRRHCP*RNSARS Trigger: TGAGCGAGCAGAATTCCTCCAGGGACAATGGCGTCT...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS-3UTR TCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGACTGGTAGTCGTAAGTaGACGGGTCGTGTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGTGSRK*TGRVPL Trigger: CAAAGGAACACGACCCGTTCACTTACGACTACCAGT...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR TCA 90 bp | CCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGAGAGGATCCCGGCGATaGCGAGGCCTCCGATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRPTKCCREERTFYWKSWRGSRR*RGLRSA Trigger: TGCAGATCGGAGGCCTCGTCATCGCCGGGATCCTCT...CCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR GCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGTTCCTTTGGACTTTCTaGCTTGGCCATGGTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGFLWTF*LGHGEE Trigger: CTCCTCACCATGGCCAAGGCAGAAAGTCCAAAGGAA...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGAACGCACGTTTTATTaGAAGTCTTGGCGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRERTFY*KSWRQG Trigger: CCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR TCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGACTGGTAGTCGTAAGTaGACGGGTCGTGTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRTGSRK*TGRVPL Trigger: CAAAGGAACACGACCCGTTCACTTACGACTACCAGT...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR GCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGTTCCTTTGGACTTTCTaGCTTGGCCATGGTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRFLWTF*LGHGEE Trigger: CTCCTCACCATGGCCAAGGCAGAAAGTCCAAAGGAA...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGCAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERNARFIGSLGGRGSLRGQKTKM*PRDAIV Trigger: GACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTG...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000612146.4 |
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| CDS-3UTR GCA 90 bp | CCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGTCCCCAGTCCTCTGCTaGTGGTTGAACTTGCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRPTKCCREERTFYWKSWSPVLC*WLNLHR Trigger: CCGGTGCAAGTTCAACCAGCAGCAGAGGACTGGGGA...CCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR CCA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGCAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VERNARFIGSLGGRGSLRQKTKM*PRDAIV Trigger: GACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTG...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000351325.9 ENST00000612146.4 |
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| CDS-3UTR CCA 90 bp | AGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCGGGTCGTGTTCCTTTaGACTTTCTGCCTTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVERNARFIGSLGGRGSRVVFL*TFCLGH Trigger: ATGGCCAAGGCAGAAAGTCCAAAGGAACACGACCCG...ACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR CCA 90 bp | GGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCCCAGTCCTCTGCTGCTaGTTGAACTTGCACCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTETDKVLSRGTHVLLEVPVLCC*LNLHRH Trigger: ATGCCGGTGCAAGTTCAACCAGCAGCAGAGGACTGG...GACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR CCA 90 bp | CCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGTGGACAGACGGCGGATaGAGCTGCGGAAAGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRPTKCCREERTFYWKSWWTDGG*SCGKFP Trigger: AGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCCA...CCAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR GCA 90 bp | AGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTGGTTCCCCAGTCCTCTaGTGCTGGTTGAACTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDRDRQSAVERNARFIGSGSPVL*CWLNLH Trigger: GTGCAAGTTCAACCAGCAGCAGAGGACTGGGGAACC...ACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR TCA 90 bp | GACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTTCCTCTGCTGCTGGTTaGACTTGCACCGGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DRDRQSAVERNARFIGSLSSAAG*TCTGIF Trigger: GAAGATGCCGGTGCAAGTTCAACCAGCAGCAGAGGA...AAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR CCA 90 bp | AGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTGAACGCACGTTTTATTaGAAGTCTTGGCGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDRDRQSAVERNARFIGSERTFY*KSWRQG Trigger: CCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTC...ACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR TCA 90 bp | AGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTACTGGTAGTCGTAAGTaGACGGGTCGTGTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDRDRQSAVERNARFIGSTGSRK*TGRVPL Trigger: CAAAGGAACACGACCCGTTCACTTACGACTACCAGT...ACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR GCA 90 bp | AGGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTTTCCTTTGGACTTTCTaGCTTGGCCATGGTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRDRQSAVERNARFIGSFLWTF*LGHGEE Trigger: CTCCTCACCATGGCCAAGGCAGAAAGTCCAAAGGAA...ACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS-3UTR CCA 90 bp | GGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCCAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTETDKVLSRGTHVLLEVQKTKM*PRDAIV Trigger: GACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTG...GACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000351325.9 |
||
| CDS TCA 90 bp | TGCACCGGCATCTTCTGCCTGTGGGCGTGGAGAGGTAGGAGAAGCTaGGGCTCCCTCCCGGCGGGCGCCAAGCGGCGCTGTAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTGIFCLWAWRGRRS*GSLPAGAKRRCSSS Trigger: GCTGGAGCTACAGCGCCGCTTGGCGCCCGCCGGGAGGGAGCCTCAGCTTCTCCTACCTCTCCACGCCCACAGGCAGAAGATGCCGGTGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589121.1 ENST00000592818.5 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCTTCAACTCTGGCACTaGGCCCCCTCCCTCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSFPPTAVSELQHLAGFHLQLWH*APSLSR Trigger: GCGGGAGAGGGAGGGGGCCAAGTGCCAGAGTTGAAG...ATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000588081.5 |
||
| CDS GCA 90 bp | CCAGCCCTACACACGTGTGTGTCCCAACTCCACACCCTGCCAGGGTaGACACGCACCAGCAGGGCAGGGAGGAGTCACCCACATCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PALHTCVSQLHTLPG*TRTSRAGRSHPHPT Trigger: GGTGGGATGTGGGTGACTCCTCCCTGCCCTGCTGGTGCGTGTGCACCCTGGCAGGGTGTGGAGTTGGGACACACACGTGTGTAGGGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS TCA 90 bp | AGGCATCCAATACTCCTCCTCTGGGCCTCCGGTGCCCCCACGCAGTaGCGCAACCAGCCCTACACACGTGTGTGTCCCAACTCCACACCC | + |
|
Preference number: 5 (lower is better) Translates to: RHPILLLWASGAPTQ*RNQPYTRVCPNSTP Trigger: GGGTGTGGAGTTGGGACACACACGTGTGTAGGGCTGGTTGCGTCACTGCGTGGGGGCACCGGAGGCCCAGAGGAGGAGTATTGGATGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGGCCAAGAGACGCCATaGTCCCTGGCAGGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERNARFIGSLGGRGSLRGGQETP*SLAGQR Trigger: CCTCTGCCCTGCCAGGGACAATGGCGTCTCTTGGCC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000588715.5 |
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| CDS-3UTR CAA 90 bp | CCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCACGGGTCGTGTTCCTTaGGACTTTCTGCCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPSLPPPCQSCSTWPDSITGRVP*DFLPWP Trigger: TGGCCAAGGCAGAAAGTCCAAAGGAACACGACCCGT...GATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS-3UTR CAA 90 bp | CCTCCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTGGCCGGATTCCATCGTTTTATTGGAAGTCTaGGCGGCAGGGGGAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSLPPPCQSCSTWPDSIVLLEV*AAGGVC Trigger: GCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAAC...GATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000588081.5 |
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| CDS GCA 90 bp | TGTAAACACCGTCAGGCATCCAATACTCCTCCTCTGGGCCTCCGGTaGCCCCACGCAGTGACGCAACCAGCCCTACACACGTGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CKHRQASNTPPLGLR*PHAVTQPALHTCVS Trigger: GGACACACACGTGTGTAGGGCTGGTTGCGTCACTGCGTGGGGGCACCGGAGGCCCAGAGGAGGAGTATTGGATGCCTGACGGTGTTTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGTCCCCAAACTGCTGGTaGGAGCAGGACGTGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VERNARFIGSLGGRGSLRSPNCW*EQDVGC Trigger: ACACCCCACGTCCTGCTCCAACCAGCAGTTTGGGGA...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGACGGGTCGTGTTCCTTaGGACTTTCTGCCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERNARFIGSLGGRGSLRGTGRVP*DFLPWP Trigger: TGGCCAAGGCAGAAAGTCCAAAGGAACACGACCCGT...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGTTTTATTGGAAGTCTaGGCGGCAGGGGGAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERNARFIGSLGGRGSLRGVLLEV*AAGGVC Trigger: GCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAAC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGGGGAACGCACGTTTTATaGGAAGTCTTGGCGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ERNARFIGSLGGRGSLRGGTHVL*EVLAAG Trigger: CCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCC...CCCCCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTC 59% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt. Matches the following 6 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588715.5 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGCCAAGAGACGCCATaGTCCTCTCCCCAAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VERNARFIGSLGGRGSLRGQETP*SSPQTA Trigger: AGCAGTTTGGGGAGAGGACAATGGCGTCTCTTGGCC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGACGGGTCGTGTTCCTTaGGACTTTCTGCCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VERNARFIGSLGGRGSLRTGRVP*DFLPWP Trigger: TGGCCAAGGCAGAAAGTCCAAAGGAACACGACCCGT...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGTTTTATTGGAAGTCTaGGCGGCAGGGGGAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VERNARFIGSLGGRGSLRVLLEV*AAGGVC Trigger: GCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAAC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGCGGCAGGGGGAGTCTGCGGGGAACGCACGTTTTATaGGAAGTCTTGGCGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VERNARFIGSLGGRGSLRGTHVL*EVLAAG Trigger: CCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCC...CCGCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAACGTGCGTTCCTCTCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000351325.9 ENST00000589121.1 ENST00000612146.4 |
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| CDS-3UTR CAA 90 bp | GGGACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCGTTTTATTGGAAGTCTaGGCGGCAGGGGGAGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GTETDKVLSRGTHVLLEVVLLEV*AAGGVC Trigger: GCAGACTCCCCCTGCCGCCAAGACTTCCAATAAAAC...GACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR CAA 90 bp | ACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGACGGGTCGTGTTCCTTaGGACTTTCTGCCTTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TETDKVLSRGTHVLLEVLTGRVP*DFLPWP Trigger: TGGCCAAGGCAGAAAGTCCAAAGGAACACGACCCGT...CAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS-3UTR CAA 90 bp | ACCGAGACCGACAAAGTGCTGTCGAGAGGAACGCACGTTTTATTGGAAGTCTTGGTCCTCTGCTGCTGGTaGAACTTGCACCGGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: TETDKVLSRGTHVLLEVLVLCCW*NLHRHL Trigger: AAGATGCCGGTGCAAGTTCAACCAGCAGCAGAGGAC...CAAGACTTCCAATAAAACGTGCGTTCCTCTCGACAGCACTTTGTCGGTCTCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000351325.9 |
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| CDS TCA 90 bp | ATAGGGCTTGAACCCAAGGGATTAAGTCAGAGACAGTCTGGGGACTaGATCACAGAAGTGTTTGTCCTCTATCTTGGTGGCTCCAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IGLEPKGLSQRQSGD*ITEVFVLYLGGSKL Trigger: TAGCTTGGAGCCACCAAGATAGAGGACAAACACTTCTGTGATTCAGTCCCCAGACTGTCTCTGACTTAATCCCTTGGGTTCAAGCCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587056.1 ENST00000588607.5 |
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| CDS TCA 72 bp | ATCTTCTGCCTGTGGGCGTGGAGAGGTAGGAGAAGCTaGGGCTCCCTCCCGGCGGGCGCCAAGCGGCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IFCLWAWRGRRS*GSLPAGAKRRC Trigger: ACAGCGCCGCTTGGCGCCCGCCGGGAGGGAGCCTCAGCTTCTCCTACCTCTCCACGCCCACAGGCAGAAGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000589121.1 ENST00000592818.5 |
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| CDS GCA 72 bp | GGAATTCTGCTCGCTCAGGCCACCATGGCAACAGCCTaGCTTCCCCCACTCAGGGGGTCACGCACAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GILLAQATMATA*LPPLRGSRTAL Trigger: CAGGGCTGTGCGTGACCCCCTGAGTGGGGGAAGGCAGGCTGTTGCCATGGTGGCCTGAGCGAGCAGAATTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS GCA 72 bp | CACACGTGTGTGTCCCAACTCCACACCCTGCCAGGGTaGACACGCACCAGCAGGGCAGGGAGGAGTCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: HTCVSQLHTLPG*TRTSRAGRSHP Trigger: TGGGTGACTCCTCCCTGCCCTGCTGGTGCGTGTGCACCCTGGCAGGGTGTGGAGTTGGGACACACACGTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS CCA 72 bp | CCTTCCCTCCCACCGCCGTGTCAGAGCTGCAGCACCTaGCCGGATTCCATCGCTCCAGGTGTTTCTACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSLPPPCQSCST*PDSIAPGVSTA Trigger: GGCGGTAGAAACACCTGGAGCGATGGAATCCGGCCAGGTGCTGCAGCTCTGACACGGCGGTGGGAGGGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588081.5 ENST00000592818.5 |
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| CDS TCA 72 bp | ATACTCCTCCTCTGGGCCTCCGGTGCCCCCACGCAGTaGCGCAACCAGCCCTACACACGTGTGTGTCCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILLLWASGAPTQ*RNQPYTRVCPN Trigger: GTTGGGACACACACGTGTGTAGGGCTGGTTGCGTCACTGCGTGGGGGCACCGGAGGCCCAGAGGAGGAGTAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612146.4 |
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| CDS GCA 72 bp | TCTACCGCCTGCGGGTGGACAGACGGCGGATGGAGCTaGGGAAAGTTCCCTCCTCTTCATCGGGTTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: STACGWTDGGWS*GKFPPLHRVPQ Trigger: CTGGGGAACCCGATGAAGAGGAGGGAACTTTCCGCAGCTCCATCCGCCGTCTGTCCACCCGCAGGCGGTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588607.5 ENST00000588715.5 ENST00000589121.1 ENST00000589209.5 ENST00000590462.1 ENST00000592818.5 ENST00000612146.4 |
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| CDS GCA 72 bp | TGGCCGGATTCCATCGCTCCAGGTGTTTCTACCGCCTaGGGGTGGACAGACGGCGGATGGAGCTGCGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WPDSIAPGVSTA*GWTDGGWSCGK Trigger: CTTTCCGCAGCTCCATCCGCCGTCTGTCCACCCGCAGGCGGTAGAAACACCTGGAGCGATGGAATCCGGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588607.5 ENST00000588715.5 ENST00000589121.1 ENST00000589209.5 ENST00000590462.1 ENST00000592818.5 ENST00000612146.4 |
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| CDS CCA 72 bp | TTGTCCCTGGAGGAATTCTGCTCGCTCAGGCCACCATaGCAACAGCCTGCCTTCCCCCACTCAGGGGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSLEEFCSLRPP*QQPAFPHSGGH Trigger: GTGACCCCCTGAGTGGGGGAAGGCAGGCTGTTGCCATGGTGGCCTGAGCGAGCAGAATTCCTCCAGGGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS CAA 72 bp | TCATCGGGTTCCCCAGTCCTCTGCTGCTGGTTGAACTaGCACCGGCATCTTCTGCCTGTGGGCGTGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGSPVLCCWLN*HRHLLPVGVER Trigger: CCTCTCCACGCCCACAGGCAGAAGATGCCGGTGCAAGTTCAACCAGCAGCAGAGGACTGGGGAACCCGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589121.1 ENST00000592818.5 |
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| CDS CCA 72 bp | TGGCCAAGAGACGCCATTGTCCTCTCCCCAAACTGCTaGTTGGAGCAGGACGTGGGGTGTAAACACCGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: WPRDAIVLSPNC*LEQDVGCKHRQ Trigger: CTGACGGTGTTTACACCCCACGTCCTGCTCCAACCAGCAGTTTGGGGAGAGGACAATGGCGTCTCTTGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589209.5 ENST00000612146.4 |
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| CDS CCA 72 bp | GCCATGGTGAGGAGACCCACACAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTCCCTGGCAGGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AMVRRPTQKTKM*PRDAIVPGRAE Trigger: CTCTGCCCTGCCAGGGACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTGTGTGGGTCTCCTCACCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000588715.5 |
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| CDS CCA 72 bp | GCCATGGTGAGGAGACCCACACAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTCCCCAATCGGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: AMVRRPTQKTKM*PRDAIVPNRAV Trigger: GACAGCCCGATTGGGGACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTGTGTGGGTCTCCTCACCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000351325.9 ENST00000592818.5 |
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| CDS CAA 72 bp | TCATCGGGTTCCCCAGTCCTCTGCTGCTGGTTGAACTaGCACCGGCATCTTCTGCTCAGCACGATGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SSGSPVLCCWLN*HRHLLLSTMRM Trigger: CATCCTCATCGTGCTGAGCAGAAGATGCCGGTGCAAGTTCAACCAGCAGCAGAGGACTGGGGAACCCGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000588081.5 ENST00000588607.5 ENST00000588715.5 ENST00000589209.5 ENST00000590462.1 ENST00000612146.4 |
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| CDS CCA 72 bp | TTGTCCTCTCCCCAAACTGCTGGTTGGAGCAGGACGTaGGGTGTAAACACCGTCAGGCATCCAATACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSPQTAGWSRT*GVNTVRHPILL Trigger: GAGGAGTATTGGATGCCTGACGGTGTTTACACCCCACGTCCTGCTCCAACCAGCAGTTTGGGGAGAGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000589209.5 ENST00000612146.4 |
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| CDS CCA 72 bp | GCCATGGTGAGGAGACCCACACAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTCCTCTCCCCAAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: AMVRRPTQKTKM*PRDAIVLSPNC Trigger: GCAGTTTGGGGAGAGGACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTGTGTGGGTCTCCTCACCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589209.5 ENST00000612146.4 |
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| CDS CCA 72 bp | GCCATGGTGAGGAGACCCACACAGAAAACCAAGATGTaGCCAAGAGACGCCATTGTCCCTGGAGGAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AMVRRPTQKTKM*PRDAIVPGGIL Trigger: CAGAATTCCTCCAGGGACAATGGCGTCTCTTGGCCACATCTTGGTTTTCTGTGTGGGTCTCCTCACCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455515.6 |
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| CDS TCA 72 bp | GGTCGTGTTCCTTTGGACTTTCTGCCTTGGCCATGGTaGGGAGACCCACACAGAAAACCAAGATGTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GRVPLDFLPWPW*GDPHRKPRCGQ Trigger: TTGGCCACATCTTGGTTTTCTGTGTGGGTCTCCTCACCATGGCCAAGGCAGAAAGTCCAAAGGAACACGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000351325.9 ENST00000455515.6 ENST00000587056.1 ENST00000588081.5 ENST00000588607.5 ENST00000588715.5 ENST00000589209.5 ENST00000592818.5 ENST00000612146.4 |
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| CDS TCA 72 bp | GAACCCAAGGGATTAAGTCAGAGACAGTCTGGGGACTaGATCACAGAAGTGTTTGTCCTCTATCTTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EPKGLSQRQSGD*ITEVFVLYLGG Trigger: GCCACCAAGATAGAGGACAAACACTTCTGTGATTCAGTCCCCAGACTGTCTCTGACTTAATCCCTTGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587056.1 ENST00000588607.5 |
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