Pregenerated sensors for FXR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000114416Ensembl transcript IDs: ENST00000305586.11, ENST00000357559.9, ENST00000461044.5, ENST00000461801.1, ENST00000465551.5, ENST00000469882.5, ENST00000475315.5, ENST00000476672.1, ENST00000479176.5, ENST00000480918.5, ENST00000481383.1, ENST00000482125.1, ENST00000484790.5, ENST00000491674.1
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGGCCCAGAACTGAGTTCAAATGATGCTCCCACCTCAGGCTCCTaGGTAGCTAGAACCAAAGACATAAGCTACTGTGCCAGGCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SGPELSSNDAPTSGS*VARTKDISYCARLQ Trigger: CTGGAGCCTGGCACAGTAGCTTATGTCTTTGGTTCTAGCTACTCAGGAGCCTGAGGTGGGAGCATCATTTGAACTCAGTTCTGGGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR TCA 90 bp | GGTTACAAAACGCTAGACACAGCTAACAGCAGCTACAAAAATACGTaGCTTAGCACAACAGCAATGGAACCCAGCATCATCTCAGGTAAG | + |
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Preference number: 1 (lower is better) Translates to: GYKTLDTANSSYKNT*LSTTAMEPSIISGK Trigger: CTTACCTGAGATGATGCTGGGTTCCATTGCTGTTGTGCTAAGTCACGTATTTTTGTAGCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CCA 90 bp | CAGCTAACAGCAGCTACAAAAATACGTGACTTAGCACAACAGCAATaGAACCCAGCATCATCTCAGGTAAGTTTCTGTGAACTCACCAGT | + |
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Preference number: 1 (lower is better) Translates to: QLTAATKIRDLAQQQ*NPASSQVSFCELTS Trigger: ACTGGTGAGTTCACAGAAACTTACCTGAGATGATGCTGGGTTCCATTGCTGTTGTGCTAAGTCACGTATTTTTGTAGCTGCTGTTAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR GCA 90 bp | GACCTCAATATCAGAGATTTTTGTGAGTCACTTAGCCTCTTCCCTTaGCTTTACTGGCCATCTGGGTTGACATTAGAAATGAGTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: DLNIRDFCESLSLFP*LYWPSGLTLEMSPK Trigger: CTTAGGACTCATTTCTAATGTCAACCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAGTGACTCACAAAAATCTCTGATATTGAGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CCA 90 bp | ATCAGAGATTTTTGTGAGTCACTTAGCCTCTTCCCTTGCCTTTACTaGCCATCTGGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: IRDFCESLSLFPCLY*PSGLTLEMSPKVLY Trigger: ATACAGCACCTTAGGACTCATTTCTAATGTCAACCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAGTGACTCACAAAAATCTCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR GCA 90 bp | TGGACTGCTGTACAGTGTGCTGTTTATCAGCTTAGAGCCAACTACTaGCTTAGCAACAAGATATATATAGGAAGAGCTTCTATCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: WTAVQCAVYQLRANY*LSNKIYIGRASILC Trigger: ACACAGGATAGAAGCTCTTCCTATATATATCTTGTTGCTAAGGCAGTAGTTGGCTCTAAGCTGATAAACAGCACACTGTACAGCAGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR GCA 90 bp | CATGAGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTaGAGAGGATACAAATGGTGCTGTTTCCCAGTCCAAGATTTAGTT | + |
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Preference number: 1 (lower is better) Translates to: HENTSWFEPQKRKSV*RGYKWCCFPVQDLV Trigger: AACTAAATCTTGGACTGGGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CCA 90 bp | TTCAGTGCAAACAACATACCCGTTTTAAGACAGGTGTTAAGACAATaGAAACCACTTAAAAATACCAAGGAGCACAGCAGAGCACATTTT | + |
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Preference number: 1 (lower is better) Translates to: FSANNIPVLRQVLRQ*KPLKNTKEHSRAHF Trigger: AAAATGTGCTCTGCTGTGCTCCTTGGTATTTTTAAGTGGTTTCCATTGTCTTAACACCTGTCTTAAAACGGGTATGTTGTTTGCACTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR GCA 90 bp | TTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTaGTGTTTCCCAGTCCAAGATTTAGTTAACATACCAACTTCTATA | + |
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Preference number: 1 (lower is better) Translates to: FEPQKRKSVCRGYKW*CFPVQDLVNIPTSI Trigger: TATAGAAGTTGGTATGTTAACTAAATCTTGGACTGGGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CCA 90 bp | GTCTTCTCCAATTTGCTGTTCATATTAGTCCTCATTAGAAGTTTGTaGGGAATTCCTATCTATAGCCTTCACATTAGACCTCAATATCAG | + |
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Preference number: 1 (lower is better) Translates to: VFSNLLFILVLIRSL*GIPIYSLHIRPQYQ Trigger: CTGATATTGAGGTCTAATGTGAAGGCTATAGATAGGAATTCCCCACAAACTTCTAATGAGGACTAATATGAACAGCAAATTGGAGAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR TCA 90 bp | TCTGACTTTAGCAGATTGCAGTTACTGCTTTATTGCAAAAGCTCCTaGAATAAAACCCAAATACTATCAGAGATTAACATGGGTTATGAG | + |
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Preference number: 1 (lower is better) Translates to: SDFSRLQLLLYCKSS*NKTQILSEINMGYE Trigger: CTCATAACCCATGTTAATCTCTGATAGTATTTGGGTTTTATTTCAGGAGCTTTTGCAATAAAGCAGTAACTGCAATCTGCTAAAGTCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGAGAACTGAGTTCAAATaGTGCTCCCACCTCAGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GRALKIPTRPALSGWIKLRTEFK*CSHLRL Trigger: GAGCCTGAGGTGGGAGCATCATTTGAACTCAGTTCT...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGCTTAGCCTCTTCCCTTaGCTTTACTGGCCATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VLRCESSTYLYRSSLGPLLSLFP*LYWPSG Trigger: CCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAG...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCCCAGAGACACCATTTTaGACAAGTTGTAGCCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TSIRPSLGYKTLDTANSSPETPF*TSCSPL Trigger: AAGGGGGCTACAACTTGTGCAAAATGGTGTCTCTGG...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 90 bp | TGTGAGTCACTTAGCCTCTTCCCTTGCCTTTACTGGCCATCTGGGTaGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: CESLSLFPCLYWPSG*TLEMSPKVLYKNCF Trigger: AAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAGTGACTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGCTGATTTTTGGTCACTaGTATGAGAGCCTTCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: GRALKIPTRPALSGWIKLLIFGH*YESLQN Trigger: ATTTTGAAGGCTCTCATATCAGTGACCAAAAATCAG...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCGTGAACTCACCAGTTTaGTGTGCTGCTTCTAATTCC | + |
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Preference number: 2 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSVNSPV*CAASNS Trigger: GGAATTAGAAGCAGCACATCAAACTGGTGAGTTCAC...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR TCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTCAGCATACTCCTTATaGGAATACTTGGGCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: VLRCESSTYLYRSSLGPLSAYSL*EYLGIW Trigger: CCAAATGCCCAAGTATTCTCATAAGGAGTATGCTGA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 90 bp | TGTTTATCTGTCCTTAGGCAACAGCCCATGAGAACACTAGTTGGTTaGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: CLSVLRQQPMRTLVG*SLKSVNLFAEDTNG Trigger: ACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCTCATGGGCTGTTGCCTAAGGACAGATAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCTCCAAATGGAGGAACTaGAAGTGCGATGTAAAGACT | + |
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Preference number: 2 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSSKWRN*KCDVKT Trigger: AGTCTTTACATCGCACTTTCAGTTCCTCCATTTGGA...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTTTAATGGCTACCCTTTaGGGAGTGGGGCTCTCTAAA | + |
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Preference number: 2 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGLMATL*GVGLSK Trigger: TTTAGAGAGCCCCACTCCCCAAAGGGTAGCCATTAA...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACATTAGCACAACAGCAATaGAACCCAGCATCATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTLAQQQ*NPASSQ Trigger: CTGAGATGATGCTGGGTTCCATTGCTGTTGTGCTAA...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTAGACATAAGCTACTGTaGCAGGCTCCAGAATACATC | + |
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Preference number: 2 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGRHKLL*QAPEYI Trigger: GATGTATTCTGGAGCCTGGCACAGTAGCTTATGTCT...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCATGCTGAAACATTGTTaGAACTGCACAAGATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPMLKHC*NCTRSS Trigger: GGAAGATCTTGTGCAGTTGCAACAATGTTTCAGCAT...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGCTGACTTTAGCAGATTaGAGTTACTGCTTTATTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLRCESSTYLYRSSLGPLLTLAD*SYCFIA Trigger: TGCAATAAAGCAGTAACTGCAATCTGCTAAAGTCAG...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGGCTAGAATGAAGAATTaGTTCAGCTATACTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: VLRCESSTYLYRSSLGPLARMKN*FSYTHS Trigger: AGAGTGAGTATAGCTGAACCAATTCTTCATTCTAGC...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTGAATACTTGGGCATTTaGTTAGGTGTTGCTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGEYLGI*LGVAQG Trigger: ACCCTGAGCAACACCTAACCAAATGCCCAAGTATTC...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 90 bp | CACAACACTTTTCATATGCCAAGTGATAACAAAGGGCTGTCATTCTaGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: HNTFHMPSDNKGLSF*FSGPYNIVEQSLPL Trigger: TAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAATGACAGCCCTTTGTTATCACTTGGCATATGAAAAGTGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 90 bp | AGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTaGTCTTTACTCATTGGTGCTTCCAGATATATTTTAAAGAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: RCESSTYLYRSSLGP*SLLIGASRYILKKA Trigger: CGCCTTCTTTAAAATATATCTGGAAGCACCAATGAGTAAAGACAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCACAACACTTTTCATATaGCAAGTGATAACAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPTTLFI*QVITKG Trigger: GCCCTTTGTTATCACTTGGCATATGAAAAGTGTTGT...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCAAAGCAGGTCATTTTTaGCACCATATAATCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPKAGHF*HHIISA Trigger: AGCTGAGATTATATGGTGGCAAAAATGACCTGCTTT...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTTAAGCAAGTTCTCCTaGCATCAAGTATTTTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VLRCESSTYLYRSSLGPLLSKFS*HQVFSK Trigger: TTTGGAAAATACTTGATGGCAGGAGAACTTGCTTAA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCGTCCATATAATATTGTaGAACAAAGCCTTCCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPVHIIL*NKAFPY Trigger: ATAGGGGAAGGCTTTGTTCCACAATATTATATGGAC...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 90 bp | GGTGTCTTCTCCAATTTGCTGTTCATATTAGTCCTCATTAGAAGTTaGTGGGGAATTCCTATCTATAGCCTTCACATTAGACCTCAATAT | + |
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Preference number: 2 (lower is better) Translates to: GVFSNLLFILVLIRS*WGIPIYSLHIRPQY Trigger: ATATTGAGGTCTAATGTGAAGGCTATAGATAGGAATTCCCCACAAACTTCTAATGAGGACTAATATGAACAGCAAATTGGAGAAGACACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR GCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAAACATTGTTGCAACTaGACAAGATCTTCCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTKHCCN*TRSSRI Trigger: TATTCTGGAAGATCTTGTGCAGTTGCAACAATGTTT...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 90 bp | TTGTACTATGGCCTTCACAATTCTGATAACCTAAGCATGTTTTCCTaGATAGTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCT | + |
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Preference number: 2 (lower is better) Translates to: LYYGLHNSDNLSMFS*IVLRCESSTYLYRS Trigger: AGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTACTATCAAGGAAAACATGCTTAGGTTATCAGAATTGTGAAGGCCATAGTACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTGAAGAAATAAGCAAATaGACTGTGGGAAATCATCTT | + |
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Preference number: 2 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGEEISK*TVGNHL Trigger: AAGATGATTTCCCACAGTCCATTTGCTTATTTCTTC...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTTGGGATAATCTGTTATaGTTAACATTTGCTAACACC | + |
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Preference number: 2 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGWDNLL*LTFANT Trigger: GGTGTTAGCAAATGTTAACCATAACAGATTATCCCA...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR TCA 72 bp | GAACTGAGTTCAAATGATGCTCCCACCTCAGGCTCCTaGGTAGCTAGAACCAAAGACATAAGCTACTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: ELSSNDAPTSGS*VARTKDISYCA Trigger: GGCACAGTAGCTTATGTCTTTGGTTCTAGCTACTCAGGAGCCTGAGGTGGGAGCATCATTTGAACTCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR TCA 72 bp | ACGCTAGACACAGCTAACAGCAGCTACAAAAATACGTaGCTTAGCACAACAGCAATGGAACCCAGCATCATC | + |
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Preference number: 3 (lower is better) Translates to: TLDTANSSYKNT*LSTTAMEPSII Trigger: GATGATGCTGGGTTCCATTGCTGTTGTGCTAAGTCACGTATTTTTGTAGCTGCTGTTAGCTGTGTCTAGCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CAA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCCCCTTCTATCCCCCATaGTCTTCCAAAGTTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSPFYPP*SSKVAF Trigger: AAAGGCAACTTTGGAAGACAATGGGGGATAGAAGGG...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CAA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGGTGGTCCATATAATATaGTGGAACAAAGCCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: VLRCESSTYLYRSSLGPLVVHII*WNKAFP Trigger: GGGGAAGGCTTTGTTCCACAATATTATATGGACCAC...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGAAAGGGCTGTCATTCTaGTTCAGTGGTCCATATAAT | + |
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Preference number: 3 (lower is better) Translates to: GRALKIPTRPALSGWIKLKGLSF*FSGPYN Trigger: ATTATATGGACCACTGAACAAGAATGACAGCCCTTT...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGAAAAGCAGGTCATTTTaGCCACCATATAATCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: GRALKIPTRPALSGWIKLKSRSF*PPYNLS Trigger: GCTGAGATTATATGGTGGCAAAAATGACCTGCTTTT...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CAA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTGTAGTAGGTTCACATaGAGTGCACAAGAACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VLRCESSTYLYRSSLGPLCSRFT*SAQEPP Trigger: TGGAGGTTCTTGTGCACTCAATGTGAACCTACTACA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR-3UTR CAA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTACTGGCCATCTGGGTaGACATTAGAAATGAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VLRCESSTYLYRSSLGPLYWPSG*TLEMSP Trigger: AGGACTCATTTCTAATGTCAACCCAGATGGCCAGTA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CCA 72 bp | TTTTGTGAGTCACTTAGCCTCTTCCCTTGCCTTTACTaGCCATCTGGGTTGACATTAGAAATGAGTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FCESLSLFPCLY*PSGLTLEMSPK Trigger: CTTAGGACTCATTTCTAATGTCAACCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAGTGACTCACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR GCA 72 bp | ACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTaGAGAGGATACAAATGGTGCTGTTTCCCAGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: TSWFEPQKRKSV*RGYKWCCFPVQ Trigger: TTGGACTGGGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR GCA 72 bp | ATCAGAGATTTTTGTGAGTCACTTAGCCTCTTCCCTTaGCTTTACTGGCCATCTGGGTTGACATTAGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: IRDFCESLSLFP*LYWPSGLTLEM Trigger: CATTTCTAATGTCAACCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAGTGACTCACAAAAATCTCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR-3UTR CAA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCTATAAAGGACAGGAGTaGCACTACTCACACCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPYKGQE*HYSHLT Trigger: AGTAAGGTGTGAGTAGTGCAACTCCTGTCCTTTATA...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTAGAATACTTGGGCATTaGGTTAGGTGTTGCTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGRILGH*VRCCSG Trigger: CCCTGAGCAACACCTAACCAAATGCCCAAGTATTCT...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CCA 72 bp | AAGGTCCCACGGCTAGTGAAACTAAAATTAGGTCCTTaGTGTCTTCTCCAATTTGCTGTTCATATTAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KVPRLVKLKLGP*CLLQFAVHISP Trigger: AGGACTAATATGAACAGCAAATTGGAGAAGACACCAAGGACCTAATTTTAGTTTCACTAGCCGTGGGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR-3UTR CAA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGATGATTAAACACACTTaGGGAATGAGAGGTAGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLRCESSTYLYRSSLGPLMIKHT*GMRGRL Trigger: TAACCTACCTCTCATTCCCAAAGTGTGTTTAATCAT...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR GCA 72 bp | GTACAGTGTGCTGTTTATCAGCTTAGAGCCAACTACTaGCTTAGCAACAAGATATATATAGGAAGAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VQCAVYQLRANY*LSNKIYIGRAS Trigger: AGAAGCTCTTCCTATATATATCTTGTTGCTAAGGCAGTAGTTGGCTCTAAGCTGATAAACAGCACACTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTAGAACACTAGTTGGTTaGAGCCTCAAAAGCGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGRTLVG*SLKSVN Trigger: ATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR TCA 72 bp | TTTGTGTATTCCTATTACACTTTTGCCAATTATTTCTaGAGTGTTACCAGAGACACCATTTTGCACAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: FVYSYYTFANYF*SVTRDTILHKL Trigger: CAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTGGCAAAAGTGTAATAGGAATACACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR GCA 72 bp | AAATTAACACAAACTATGCACACAACACTTTTCATATaGCAAGTGATAACAAAGGGCTGTCATTCTTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLTQTMHTTLFI*QVITKGCHSCS Trigger: TGAACAAGAATGACAGCCCTTTGTTATCACTTGGCATATGAAAAGTGTTGTGTGCATAGTTTGTGTTAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGGTGTTGCTCAGGGTCTaGCATGTGACTAGACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLVLLRV*HVTRLK Trigger: TTTGAGTCTAGTCACATGTCAGACCCTGAGCAACAC...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTACTAAACAGGGCTGGGATTaGGATCCCCCGCCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSELRFSLQFVSCRSYLTKQGWD*DPPPFT Trigger: GGTGAAGGGCGGGGGATCCCAATCCCAGCCCTGTTT...AGTAAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491674.1 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTACTTCAGCTCCGCCATGTTaGAACCGCAAAGGCCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSELRFSLQFVSCRSYLTSAPPC*NRKGRW Trigger: CCAGCGGCCTTTGCGGTTCCAACATGGCGGAGCTGA...AGTAAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491674.1 |
||
| CDS-3UTR TCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGGCCAAGGCAACATGCTaGGAATGGCTGATCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRCESSTYLYRSSLGPLAKATC*EWLIFL Trigger: GAGAAAGATCAGCCATTCTCAGCATGTTGCCTTGGC...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTATGTCTAGTCCCCGACGACCTCTaGCTCTTCCGCTATAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSGPYNIVEQSLPLCLVPDDL*LFRYKT Trigger: GGTCTTATAGCGGAAGAGGCAGAGGTCGTCGGGGAC...TAGACATAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGAGACATAAGCTACTGTaGCAGGCTCCAGAATACATC | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLRHKLL*QAPEYI Trigger: GATGTATTCTGGAGCCTGGCACAGTAGCTTATGTCT...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGAGCCAAAGTTTCCCTTaGGAGGTTTCTTTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLSQSFP*EVSLSA Trigger: AGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCT...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCTTCCCTTGCCTTTACTaGCCATCTGGGTTGACATTA | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPFPCLY*PSGLTL Trigger: TAATGTCAACCCAGATGGCCAGTAAAGGCAAGGGAA...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCTCCAAATGGAGGAACTaGAAGTGCGATGTAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPSKWRN*KCDVKT Trigger: AGTCTTTACATCGCACTTTCAGTTCCTCCATTTGGA...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCAGAACTGAGTTCAAATaGTGCTCCCACCTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSRTEFK*CSHLRL Trigger: GAGCCTGAGGTGGGAGCATCATTTGAACTCAGTTCT...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCTCAGCTGTTACTTCATaGTTCCGTTCAGGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPSAVTS*FRSGVI Trigger: TATGACACCTGAACGGAATCATGAAGTAACAGCTGA...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCTCAGCATACTCCTTATaGGAATACTTGGGCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPSAYSL*EYLGIW Trigger: CCAAATGCCCAAGTATTCTCATAAGGAGTATGCTGA...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGCCAGAGACACCATTTTaGACAAGTTGTAGCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLRCESSTYLYRSSLGPLPETPF*TSCSPL Trigger: AAGGGGGCTACAACTTGTGCAAAATGGTGTCTCTGG...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACACTTAGCCTCTTCCCTTaGCTTTACTGGCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTLSLFP*LYWPSG Trigger: CCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAG...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGCCACATTTTATGGCTTaGGAAACAAAAGTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLPHFMA*ETKVQS Trigger: GCTCTGGACTTTTGTTTCCCAAGCCATAAAATGTGG...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CAA 72 bp | GTCCTTAGGCAACAGCCCATGAGAACACTAGTTGGTTaGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLRQQPMRTLVG*SLKSVNLFAED Trigger: ATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCTCATGGGCTGTTGCCTAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCGTGAACTCACCAGTTTaGTGTGCTGCTTCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSIRPSLGYKTLDTANSSVNSPV*CAASNS Trigger: GGAATTAGAAGCAGCACATCAAACTGGTGAGTTCAC...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGAGCTACAAAAATACGTaGCTTAGCACAACAGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLSYKNT*LSTTAM Trigger: CATTGCTGTTGTGCTAAGTCACGTATTTTTGTAGCT...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGTTTGTTGGTAAGAAGTaGGCTATAATGGGTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLFVGKK*AIMGCP Trigger: AGGACAACCCATTATAGCTCACTTCTTACCAACAAA...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGTATGCCGACAGGCAATaGAGCATTAACTCTAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLYADRQ*SINSKK Trigger: CTTTTTAGAGTTAATGCTTCATTGCCTGTCGGCATA...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCGAATACTTGGGCATTTaGTTAGGTGTTGCTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSIRPSLGYKTLDTANSSEYLGI*LGVAQG Trigger: ACCCTGAGCAACACCTAACCAAATGCCCAAGTATTC...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CAA 72 bp | CTTAGCCTCTTCCCTTGCCTTTACTGGCCATCTGGGTaGACATTAGAAATGAGTCCTAAGGTGCTGTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLFPCLYWPSG*TLEMSPKVLYK Trigger: TTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCCAGATGGCCAGTAAAGGCAAGGGAAGAGGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAGACAGCCAAGTTAGCTaGAAAAGGAAGCCTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTDSQVS*KRKPRG Trigger: ACCTCTAGGCTTCCTTTTTCAGCTAACTTGGCTGTC...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGGAATCCGTGTTTCATTaGAGGCTATTAGGCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLRCESSTYLYRSSLGPLESVFH*RLLGKL Trigger: CAGTTTGCCTAATAGCCTTCAATGAAACACGGATTC...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCAAAGCAGGTCATTTTTaGCACCATATAATCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPKAGHF*HHIISA Trigger: AGCTGAGATTATATGGTGGCAAAAATGACCTGCTTT...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCAGAGGATACAAATGGTaGTGTTTCCCAGTCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSIRPSLGYKTLDTANSSRGYKW*CFPVQD Trigger: ATCTTGGACTGGGAAACAGCACCATTTGTATCCTCT...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCCTGACTTTAGCAGATTaGAGTTACTGCTTTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPLTLAD*SYCFIA Trigger: TGCAATAAAGCAGTAACTGCAATCTGCTAAAGTCAG...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGCTTAGAGCCAACTACTaGCTTAGCAACAAGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLLRANY*LSNKIY Trigger: ATATATCTTGTTGCTAAGGCAGTAGTTGGCTCTAAG...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGTACAAGTTAAACTTCTaGAGAAGCCAGGTAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRALKIPTRPALSGWIKLYKLNF*RSQVNR Trigger: TCTGTTTACCTGGCTTCTGCAGAAGTTTAACTTGTA...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTCACAGTTGCTTCACTaGCAGACAGTATCATTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRCESSTYLYRSSLGPLSQLLH*QTVSLA Trigger: AGCTAATGATACTGTCTGCCAGTGAAGCAACTGTGA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACATTAATGGCTACCCTTTaGGGAGTGGGGCTCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTLMATL*GVGLSK Trigger: TTTAGAGAGCCCCACTCCCCAAAGGGTAGCCATTAA...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCCTAAAATTAGGTCCTTaGTGTCTTCTCCAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPLKLGP*CLLQFA Trigger: AGCAAATTGGAGAAGACACCAAGGACCTAATTTTAG...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCTGCATTCAGCATAGTTaGAAATGTCTGGGATGGATA | + |
|
Preference number: 4 (lower is better) Translates to: TSIRPSLGYKTLDTANSSCIQHS*KCLGWI Trigger: TATCCATCCCAGACATTTTCAACTATGCTGAATGCA...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAGGAAGCCTAGAGGTTaGAATGTAAGCAACCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTRKPRG*NVSNQA Trigger: TGCTTGGTTGCTTACATTTCAACCTCTAGGCTTCCT...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTCATGCTGAGAATGGCTaGTCTTTCTCAGATCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGHAENG*SFSDPE Trigger: CTCAGGATCTGAGAAAGATCAGCCATTCTCAGCATG...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCCGAATACTTCGCAAATaGATGTCACTTAAGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFKEGLSGPELSSNDAPRILRK*MSLKMF Trigger: AAACATCTTAAGTGACATGCATTTGCGAAGTATTCG...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCATGCTGAAACATTGTTaGAACTGCACAAGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSIRPSLGYKTLDTANSSMLKHC*NCTRSS Trigger: GGAAGATCTTGTGCAGTTGCAACAATGTTTCAGCAT...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCCTTTTGAGGGTTCAGTaGAAACAACATACCCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSIRPSLGYKTLDTANSSLLRVQ*KQHTRF Trigger: AAAACGGGTATGTTGTTTGCACTGAACCCTCAAAAG...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTCTAACTTCATTAAATaGAACCTGGCGTTCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLRCESSTYLYRSSLGPLSNFIK*NLAFWL Trigger: CAACCAGAACGCCAGGTTCCATTTAATGAAGTTAGA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCTCTACAGATCTAGCTTaGGGCCTTTGTCTTTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSSTDLA*GLCLYS Trigger: TGAGTAAAGACAAAGGCCCCAAGCTAGATCTGTAGA...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTAGACGGGTGCTTAAATaGCCTTGTAGAAAGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICSELRFSLQFVSCRSYLRRVLK*PCRKPR Trigger: ACGGGGCTTTCTACAAGGCCATTTAAGCACCCGTCT...AAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491674.1 |
||
| CDS-3UTR TCA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGCTGATTTTTGGTCACTaGTATGAGAGCCTTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLRCESSTYLYRSSLGPLLIFGH*YESLQN Trigger: ATTTTGAAGGCTCTCATATCAGTGACCAAAAATCAG...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTATGTCTAGTAGTAGGTTCACATTaGGTGCACAAGAACCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSGPYNIVEQSLPLCLVVGSH*VHKNLQ Trigger: TTGGAGGTTCTTGTGCACTCAATGTGAACCTACTAC...TAGACATAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCAACACACTTTGGGAATaGGAGGTAGGTTACAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPNTLWE*EVGYKL Trigger: TAACTTGTAACCTACCTCTCATTCCCAAAGTGTGTT...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCAAGCGTAAATCTGTTTaGAGAGGATACAAATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPKRKSV*RGYKWC Trigger: GCACCATTTGTATCCTCTGCAAACAGATTTACGCTT...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTAACCGCAAAGGCCGCTaGGAAGAGATTCTAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ICSELRFSLQFVSCRSYLNRKGR*EEILET Trigger: AGTTTCTAGAATCTCTTCCCAGCGGCCTTTGCGGTT...AAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491674.1 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCTGGAACCTGGCGTTCTaGTTGCCAATTATTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSWNLAF*LPIIFK Trigger: TTTGAAAATAATTGGCAACCAGAACGCCAGGTTCCA...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACATCTCTCCGTAGATTCTaGATGTTCCAGTATCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTSLRRF*MFQYLH Trigger: ATGAAGATACTGGAACATTCAGAATCTACGGAGAGA...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACATTAAAGAAGGCGGCATaGTTAAACACACTTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTLKKAA*LNTLWE Trigger: TTCCCAAAGTGTGTTTAATCATGCCGCCTTCTTTAA...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCAGGTATAAATACTTTTaGGGGTTCAGTGCAAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSRYKYF*GFSANN Trigger: GTTGTTTGCACTGAACCCTCAAAAGTATTTATACCT...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCGTCCATATAATATTGTaGAACAAAGCCTTCCCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSVHIIL*NKAFPY Trigger: ATAGGGGAAGGCTTTGTTCCACAATATTATATGGAC...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTATGTCTACATGAGAACACTAGTTaGTTTGAGCCTCAAAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLFSGPYNIVEQSLPLCLHENTS*FEPQKR Trigger: ACGCTTTTGAGGCTCAAACCAACTAGTGTTCTCATG...TAGACATAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTATGTCTACCTTTACTGGCCATCTaGGTTGACATTAGAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSGPYNIVEQSLPLCLPLLAI*VDIRNE Trigger: CTCATTTCTAATGTCAACCCAGATGGCCAGTAAAGG...TAGACATAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCTTCTTCCACATTTTATaGCTTGGGAAACAAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPFFHIL*LGKQKS Trigger: GGACTTTTGTTTCCCAAGCCATAAAATGTGGAAGAA...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CAA 72 bp | TGTGGAACAAAGCCTTCCCCTATGTCTAACAATTACTaGACCTCACAATTAGCTGTACTAACTGTTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGTKPSPMSNNY*TSQLAVLTVVH Trigger: ATGGACAACAGTTAGTACAGCTAATTGTGAGGTCAAGTAATTGTTAGACATAGGGGAAGGCTTTGTTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CAA 72 bp | AGGTTTTGCAGTTCAGAAGCTTGTAGTAGGTTCACATaGAGTGCACAAGAACCTCCAAACATGTTAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RFCSSEACSRFT*SAQEPPNMLNL Trigger: CAGATTTAACATGTTTGGAGGTTCTTGTGCACTCAATGTGAACCTACTACAAGCTTCTGAACTGCAAAACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTATGTCTAGTAAGGGAGTCTTCATaGACATCTTTGATAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSGPYNIVEQSLPLCLVRESS*TSLINP Trigger: GGGATTTATCAAAGATGTTCATGAAGACTCCCTTAC...TAGACATAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCTTAAGCAAGTTCTCCTaGCATCAAGTATTTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPLSKFS*HQVFSK Trigger: TTTGGAAAATACTTGATGGCAGGAGAACTTGCTTAA...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTATGTCTACAGATAGTGATAATATaGCGACAGGCAATGAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLFSGPYNIVEQSLPLCLQIVII*RQAMKH Trigger: ATGCTTCATTGCCTGTCGGCATATTATCACTATCTG...TAGACATAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CCA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCTATCAGAGATTAACATaGGTTATGAGCAACTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSYQRLT*VMSNYS Trigger: ACTGTAGTTGCTCATAACCCATGTTAATCTCTGATA...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CCA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCGAAGAAATAAGCAAATaGACTGTGGGAAATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPEEISK*TVGNHL Trigger: AAGATGATTTCCCACAGTCCATTTGCTTATTTCTTC...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTACTTGCTACAATTTGTTCTaGACTTCGCTTTTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSELRFSLQFVSCRSYLTCYNLF*TSLFSS Trigger: TGAAGAGAAAAGCGAAGTTCAGAACAAATTGTAGCA...AGTAAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491674.1 |
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| CDS-3UTR GCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTACAACACTTTTCATATaGCAAGTGATAACAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGTTLFI*QVITKG Trigger: GCCCTTTGTTATCACTTGGCATATGAAAAGTGTTGT...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTGCTAGAATGAAGAATTaGTTCAGCTATACTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGARMKN*FSYTHS Trigger: AGAGTGAGTATAGCTGAACCAATTCTTCATTCTAGC...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTTATAATGGGTTGTCCTaGAAGTTAACTCTTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGYNGLS*KLTLSP Trigger: TGGAGAAAGAGTTAACTTCCAGGACAACCCATTATA...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CAA 72 bp | TTTCATATGCCAAGTGATAACAAAGGGCTGTCATTCTaGTTCAGTGGTCCATATAATATTGTGGAACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHMPSDNKGLSF*FSGPYNIVEQS Trigger: GCTTTGTTCCACAATATTATATGGACCACTGAACAAGAATGACAGCCCTTTGTTATCACTTGGCATATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 72 bp | TCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTaGTCTTTACTCATTGGTGCTTCCAGATATATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSTYLYRSSLGP*SLLIGASRYIL Trigger: TAAAATATATCTGGAAGCACCAATGAGTAAAGACAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTAAACATTGTTGCAACTaGACAAGATCTTCCAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGKHCCN*TRSSRI Trigger: TATTCTGGAAGATCTTGTGCAGTTGCAACAATGTTT...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| 3UTR CAA 72 bp | TCCAATTTGCTGTTCATATTAGTCCTCATTAGAAGTTaGTGGGGAATTCCTATCTATAGCCTTCACATTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SNLLFILVLIRS*WGIPIYSLHIR Trigger: TCTAATGTGAAGGCTATAGATAGGAATTCCCCACAAACTTCTAATGAGGACTAATATGAACAGCAAATTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| 3UTR CAA 72 bp | ATATATTTTAAAGAAGGCGGCATGATTAAACACACTTaGGGAATGAGAGGTAGGTTACAAGTTAAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYFKEGGMIKHT*GMRGRLQVKLL Trigger: CAGAAGTTTAACTTGTAACCTACCTCTCATTCCCAAAGTGTGTTTAATCATGCCGCCTTCTTTAAAATATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS TCA 90 bp | GTGTCCACAGGTCCACTCAAGTTACCTGGCTGTCTATCTTCTGCCTaGCCCCTGAAGCGACGCCTGCGGCTACGATTGCGTCGCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSTGPLKLPGCLSSA*PLKRRLRLRLRRWG Trigger: ACCCCAGCGACGCAATCGTAGCCGCAGGCGTCGCTTCAGGGGTCAGGCAGAAGATAGACAGCCAGGTAACTTGAGTGGACCTGTGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481383.1 |
||
| CDS GCA 90 bp | GATGGTGTCCACAGGTCCACTCAAGTTACCTGGCTGTCTATCTTCTaGCTGACCCCTGAAGCGACGCCTGCGGCTACGATTGCGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: DGVHRSTQVTWLSIF*LTPEATPAATIASL Trigger: CAGCGACGCAATCGTAGCCGCAGGCGTCGCTTCAGGGGTCAGGCAGAAGATAGACAGCCAGGTAACTTGAGTGGACCTGTGGACACCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481383.1 |
||
| CDS CCA 90 bp | GAACCTCCACCGTCAGCTCCGCCATGTTGGAACCGCAAAGGCCGCTaGGAAGAGATTCTAGAAACTTTCCAACCAGAGGGGAGGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPPPSAPPCWNRKGR*EEILETFQPEGRRG Trigger: CCCCCTCCTCCCCTCTGGTTGGAAAGTTTCTAGAATCTCTTCCCAGCGGCCTTTGCGGTTCCAACATGGCGGAGCTGACGGTGGAGGTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305586.11 ENST00000475315.5 ENST00000491674.1 |
||
| CDS GCA 90 bp | GATAAATCCCTTTCAATCCGTGTGGGTGACCTAATTCTTCCTGGATaGCAAACAAGAACTCAGGTGCCGAGAGGACAGGGGCTTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: DKSLSIRVGDLILPG*QTRTQVPRGQGLGC Trigger: GCATCCAAGCCCCTGTCCTCTCGGCACCTGAGTTCTTGTTTGGCATCCAGGAAGAATTAGGTCACCCACACGGATTGAAAGGGATTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484790.5 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTACTGTCAGCTCCGCCATGTaGGAACCGCAAAGGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSELRFSLQFVSCRSYLTVSSAM*EPQRPL Trigger: CAGCGGCCTTTGCGGTTCCAACATGGCGGAGCTGAC...AGTAAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491674.1 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGAGAATACTTGGGCATTaGGTTAGGTGTTGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRALKIPTRPALSGWIKLRILGH*VRCCSG Trigger: CCCTGAGCAACACCTAACCAAATGCCCAAGTATTCT...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCCTCTACAGATCTAGCTaGGGGCCTTTGTCTTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: LLFKEGLSGPELSSNDAPLYRSS*GPLSLL Trigger: GAGTAAAGACAAAGGCCCCAAGCTAGATCTGTAGAG...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS CCA 90 bp | ACAAGCATGAACCTTGGCGGTCCTTACATGCTTGAGGTGTACCTCTaGAGAGCAGCTTTGGTGTTTGCCAATACAGAACACAAACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSMNLGGPYMLEVYL*RAALVFANTEHKQK Trigger: TTTCTGTTTGTGTTCTGTATTGGCAAACACCAAAGCTGCTCTCCAGAGGTACACCTCAAGCATGTAAGGACCGCCAAGGTTCATGCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479176.5 |
||
| CDS-3UTR CAA 90 bp | ATTTGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTAAAACAGGGCTGGGATaGGGATCCCCCGCCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ICSELRFSLQFVSCRSYLKTGLG*GSPALH Trigger: GTGAAGGGCGGGGGATCCCAATCCCAGCCCTGTTTT...AAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000491674.1 |
||
| CDS-3UTR CAA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCCCTTGGGAGGTTTCTTaGTCTGCTCTGAGACTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPPWEVS*SALRLS Trigger: GCTGAGTCTCAGAGCAGACAAAGAAACCTCCCAAGG...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CAA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCTGTAGTAGGTTCACATaGAGTGCACAAGAACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLFKEGLSGPELSSNDAPCSRFT*SAQEPP Trigger: TGGAGGTTCTTGTGCACTCAATGTGAACCTACTACA...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS TCA 90 bp | ATTATAGGTTCTTACAAGCATGAACCTTGGCGGTCCTTACATGCTTaGGGTGTACCTCTGGAGAGCAGCTTTGGTGTTTGCCAATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: IIGSYKHEPWRSLHA*GVPLESSFGVCQYR Trigger: TCTGTATTGGCAAACACCAAAGCTGCTCTCCAGAGGTACACCTCAAGCATGTAAGGACCGCCAAGGTTCATGCTTGTAAGAACCTATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479176.5 |
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| CDS-3UTR CAA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTTGCTGTCTGGATCTTaGAGCACAGAACTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLRCESSTYLYRSSLGPLLLSGS*STELME Trigger: CTCCATCAGTTCTGTGCTCAAAGATCCAGACAGCAA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCTATAAAGGACAGGAGTaGCACTACTCACACCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: LLFKEGLSGPELSSNDAPYKGQE*HYSHLT Trigger: AGTAAGGTGTGAGTAGTGCAACTCCTGTCCTTTATA...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS GCA 90 bp | AATTCAGATATAGTAAGCAGGCACCATGCAAAAGCTGCCCAGTTTTaGCAATCAACCTTGATCACAATCTACAACACAGTCCCTCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSDIVSRHHAKAAQF*QSTLITIYNTVPRM Trigger: CATCCGAGGGACTGTGTTGTAGATTGTGATCAAGGTTGATTGGCAAAACTGGGCAGCTTTTGCATGGTGCCTGCTTACTATATCTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481383.1 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCAAAGGGCTGTCATTCTaGTTCAGTGGTCCATATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFKEGLSGPELSSNDAPKGLSF*FSGPYN Trigger: ATTATATGGACCACTGAACAAGAATGACAGCCCTTT...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCAGAACACTAGTTGGTTaGAGCCTCAAAAGCGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFKEGLSGPELSSNDAPRTLVG*SLKSVN Trigger: ATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCGCCAGCCCTCTCTGGTaGGATAAAATTGAAACCATA | + |
|
Preference number: 5 (lower is better) Translates to: TSIRPSLGYKTLDTANSSASPLW*DKIETI Trigger: TATGGTTTCAATTTTATCCAACCAGAGAGGGCTGGC...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | ACTTCTATAAGACCCTCCTTAGGTTACAAAACGCTAGACACAGCTAACAGCAGCTACTGGCCATCTGGGTaGACATTAGAAATGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TSIRPSLGYKTLDTANSSYWPSG*TLEMSP Trigger: AGGACTCATTTCTAATGTCAACCCAGATGGCCAGTA...GCTGCTGTTAGCTGTGTCTAGCGTTTTGTAACCTAAGGAGGGTCTTATAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTTAAAGAGGGTCTCAGTGGCCCAGAACTGAGTTCAAATGATGCTCCCGTCCTCATTAGAAGTTaGTGGGGAATTCCTATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFKEGLSGPELSSNDAPVLIRS*WGIPIY Trigger: ATAGATAGGAATTCCCCACAAACTTCTAATGAGGAC...GGGAGCATCATTTGAACTCAGTTCTGGGCCACTGAGACCCTCTTTAAAGAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACATCTAGCTTGGGGCCTTaGTCTTTACTCATTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTSSLGP*SLLIGA Trigger: AGCACCAATGAGTAAAGACAAAGGCCCCAAGCTAGA...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | GGAAGGGCCTTAAAGATACCAACTAGGCCAGCCCTCTCTGGTTGGATAAAATTGCGTTCTCTTAACTTTTaGTACTATGGCCTTCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRALKIPTRPALSGWIKLRSLNF*YYGLHN Trigger: ATTGTGAAGGCCATAGTACAAAAAGTTAAGAGAACG...CAATTTTATCCAACCAGAGAGGGCTGGCCTAGTTGGTATCTTTAAGGCCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAGTGGTCCATATAATATaGTGGAACAAAGCCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTVVHII*WNKAFP Trigger: GGGGAAGGCTTTGTTCCACAATATTATATGGACCAC...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CAA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGTATGCTGAAACATTGTaGCAACTGCACAAGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLRCESSTYLYRSSLGPLYAETL*QLHKIF Trigger: GAAGATCTTGTGCAGTTGCAACAATGTTTCAGCATA...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | CAATTATTTCTGAAGTGTTACCAGAGACACCATTTTGCACAAGTTGTAGCCCCCTTTCCAGGGGAATTTTaGTGTACCTTACCTCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QLFLKCYQRHHFAQVVAPFPGEF*CTLPQY Trigger: GTACTGAGGTAAGGTACACAAAAATTCCCCTGGAAA...GGGGGCTACAACTTGTGCAAAATGGTGTCTCTGGTAACACTTCAGAAATAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | GTACTGAGATGTGAGTCTAGTACTTATCTCTACAGATCTAGCTTGGGGCCTTTGACTAAAATTAGGTCCTaGGTGTCTTCTCCAATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLRCESSTYLYRSSLGPLTKIRS*VSSPIC Trigger: GCAAATTGGAGAAGACACCAAGGACCTAATTTTAGT...CAAAGGCCCCAAGCTAGATCTGTAGAGATAAGTACTAGACTCACATCTCAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000357559.9 |
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| CDS-3UTR CAA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCTCTGACTTTAGCAGATaGCAGTTACTGCTTTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSSDFSR*QLLLYC Trigger: GCAATAAAGCAGTAACTGCAATCTGCTAAAGTCAGA...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS TCA 90 bp | GAAACTTACTTCTCTTTCAGCACGCCTAAGGTTACTAACTGGGACTaGCAACAGTGCTCACATGTAAGGAATTCTCAAAATCTAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ETYFSFSTPKVTNWD*QQCSHVRNSQNLDF Trigger: AAAGTCTAGATTTTGAGAATTCCTTACATGTGAGCACTGTTGTCAGTCCCAGTTAGTAACCTTAGGCGTGCTGAAAGAGAAGTAAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461044.5 |
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| CDS-3UTR CAA 90 bp | AGAACACTAGTTGGTTTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAAAAGCAGGTCATTTTaGCCACCATATAATCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTLVGLSLKSVNLFAEDTKSRSF*PPYNLS Trigger: GCTGAGATTATATGGTGGCAAAAATGACCTGCTTTT...TGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAAACCAACTAGTGTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTGTTCAGTGGTCCATATAATATTGTGGAACAAAGCCTTCCCCTATGTCTAGGTGTCTTCTCCAATTaGCTGTTCATATTAGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLFSGPYNIVEQSLPLCLGVFSN*LFILVL Trigger: GAGGACTAATATGAACAGCAAATTGGAGAAGACACC...TAGACATAGGGGAAGGCTTTGTTCCACAATATTATATGGACCACTGAACAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGCCTCAAAAGCGTAAATCTGTTTGCAGAGGATACAAATGGTGCTGTTTCCATGATTAAACACACTTaGGGAATGAGAGGTAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSLKSVNLFAEDTNGAVSMIKHT*GMRGRL Trigger: TAACCTACCTCTCATTCCCAAAGTGTGTTTAATCAT...GGAAACAGCACCATTTGTATCCTCTGCAAACAGATTTACGCTTTTGAGGCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGAACTTCGCTTTTCTCTTCAGTTTGTGTCTTGTAGATCCTACCTTACTGCTTTTCTCTTCAGTTaGTGTCTTGTAGATCCTACC | + |
|
Preference number: 5 (lower is better) Translates to: CSELRFSLQFVSCRSYLTAFLFS*CLVDPT Trigger: GGTAGGATCTACAAGACACAAACTGAAGAGAAAAGC...AGTAAGGTAGGATCTACAAGACACAAACTGAAGAGAAAAGCGAAGTTCAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000491674.1 |
||
| CDS TCA 90 bp | GGGACAATAAAAGCACTAAGTACCTTGCCAGCTGAATATTTGTACTaGTTTAATGGCATCAAAGGGCACTTTAACCCTCCAAGTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GTIKALSTLPAEYLY*FNGIKGHFNPPSFK Trigger: TTTGAAACTTGGAGGGTTAAAGTGCCCTTTGATGCCATTAAATCAGTACAAATATTCAGCTGGCAAGGTACTTAGTGCTTTTATTGTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476672.1 |
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| CDS-3UTR CAA 90 bp | GGGTTGACATTAGAAATGAGTCCTAAGGTGCTGTATAAAAACTGCTTTGTTGGTAGAATCCGTGTTTCATaGAAGGCTATTAGGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GLTLEMSPKVLYKNCFVGRIRVS*KAIRQT Trigger: AGTTTGCCTAATAGCCTTCAATGAAACACGGATTCT...ACCAACAAAGCAGTTTTTATACAGCACCTTAGGACTCATTTCTAATGTCAACCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000357559.9 |
||
| CDS TCA 72 bp | TCAAGTTACCTGGCTGTCTATCTTCTGCCTGACCCCTaGAGCGACGCCTGCGGCTACGATTGCGTCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSYLAVYLLPDP*SDACGYDCVAG Trigger: CCCAGCGACGCAATCGTAGCCGCAGGCGTCGCTTCAGGGGTCAGGCAGAAGATAGACAGCCAGGTAACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481383.1 |
||
| CDS CCA 72 bp | AGCTCCAAACAGGCAGGCAGCCAGAGCCTCGGACTATaGCTCCCTTTCGCTGGGGATCCTTGGGTAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSKQAGSQSLGL*LPFAGDPWVDF Trigger: GAAGTCTACCCAAGGATCCCCAGCGAAAGGGAGCCATAGTCCGAGGCTCTGGCTGCCTGCCTGTTTGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465551.5 |
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| CDS TCA 72 bp | GGTCCACTCAAGTTACCTGGCTGTCTATCTTCTGCCTaGCCCCTGAAGCGACGCCTGCGGCTACGATTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GPLKLPGCLSSA*PLKRRLRLRLR Trigger: ACGCAATCGTAGCCGCAGGCGTCGCTTCAGGGGTCAGGCAGAAGATAGACAGCCAGGTAACTTGAGTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481383.1 |
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| CDS CAA 72 bp | TTAGAGCCGCGAACCTCCACCGTCAGCTCCGCCATGTaGGAACCGCAAAGGCCGCTGGGAAGAGATTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LEPRTSTVSSAM*EPQRPLGRDSR Trigger: TCTAGAATCTCTTCCCAGCGGCCTTTGCGGTTCCAACATGGCGGAGCTGACGGTGGAGGTTCGCGGCTCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305586.11 ENST00000475315.5 ENST00000491674.1 |
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| CDS CAA 90 bp | AAAGCCCCGTTAGAGCCGCGAACCTCCACCGTCAGCTCCGCCATGTaGGAACCGCAAAGGCCGCTGGGAAGAGATTCTAGAAACTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: KAPLEPRTSTVSSAM*EPQRPLGRDSRNFP Trigger: TGGAAAGTTTCTAGAATCTCTTCCCAGCGGCCTTTGCGGTTCCAACATGGCGGAGCTGACGGTGGAGGTTCGCGGCTCTAACGGGGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000305586.11 ENST00000475315.5 ENST00000491674.1 |
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| CDS GCA 72 bp | CACAGGTCCACTCAAGTTACCTGGCTGTCTATCTTCTaGCTGACCCCTGAAGCGACGCCTGCGGCTACGATT | + |
|
Preference number: 6 (lower is better) Translates to: HRSTQVTWLSIF*LTPEATPAATI Trigger: AATCGTAGCCGCAGGCGTCGCTTCAGGGGTCAGGCAGAAGATAGACAGCCAGGTAACTTGAGTGGACCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481383.1 |
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| CDS GCA 72 bp | CTTTCAATCCGTGTGGGTGACCTAATTCTTCCTGGATaGCAAACAAGAACTCAGGTGCCGAGAGGACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSIRVGDLILPG*QTRTQVPRGQG Trigger: CCCCTGTCCTCTCGGCACCTGAGTTCTTGTTTGGCATCCAGGAAGAATTAGGTCACCCACACGGATTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469882.5 ENST00000484790.5 |
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| CDS GCA 72 bp | AATATAATCTGCAACTGTGACTGGCTGTCTATCTTCTaGCTGACCCCTGAAGCGACGCCTGCGGCTACGATT | + |
|
Preference number: 6 (lower is better) Translates to: NIICNCDWLSIF*LTPEATPAATI Trigger: AATCGTAGCCGCAGGCGTCGCTTCAGGGGTCAGGCAGAAGATAGACAGCCAGTCACAGTTGCAGATTATATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482125.1 |
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| CDS TCA 72 bp | TCTTACAAGCATGAACCTTGGCGGTCCTTACATGCTTaGGGTGTACCTCTGGAGAGCAGCTTTGGTGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SYKHEPWRSLHA*GVPLESSFGVC Trigger: GCAAACACCAAAGCTGCTCTCCAGAGGTACACCTCAAGCATGTAAGGACCGCCAAGGTTCATGCTTGTAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479176.5 |
||
| CDS CCA 72 bp | AACCTTGGCGGTCCTTACATGCTTGAGGTGTACCTCTaGAGAGCAGCTTTGGTGTTTGCCAATACAGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: NLGGPYMLEVYL*RAALVFANTEH Trigger: GTGTTCTGTATTGGCAAACACCAAAGCTGCTCTCCAGAGGTACACCTCAAGCATGTAAGGACCGCCAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479176.5 |
||
| CDS TCA 72 bp | ACCATGCAAAAGCTGCCCAGTTTTGCCAATCAACCTTaGTCACAATCTACAACACAGTCCCTCGGATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TMQKLPSFANQP*SQSTTQSLGWQ Trigger: CTGCCATCCGAGGGACTGTGTTGTAGATTGTGATCAAGGTTGATTGGCAAAACTGGGCAGCTTTTGCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481383.1 |
||
| CDS CAA 72 bp | CACCATGCAAAAGCTGCCCAGTTTTGCCAATCAACCTaGATCACAATCTACAACACAGTCCCTCGGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HHAKAAQFCQST*ITIYNTVPRMA Trigger: TGCCATCCGAGGGACTGTGTTGTAGATTGTGATCAAGGTTGATTGGCAAAACTGGGCAGCTTTTGCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481383.1 |
||
| CDS CAA 90 bp | CTTGGCGGTCCTTACATGCTTGAGGTGTACCTCTGGAGAGCAGCTTaGGTGTTTGCCAATACAGAACACAAACAGAAATTAATGCTAATG | + |
|
Preference number: 6 (lower is better) Translates to: LGGPYMLEVYLWRAA*VFANTEHKQKLMLM Trigger: CATTAGCATTAATTTCTGTTTGTGTTCTGTATTGGCAAACACCAAAGCTGCTCTCCAGAGGTACACCTCAAGCATGTAAGGACCGCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479176.5 |
||
| CDS CAA 90 bp | GAATTCAGATATAGTAAGCAGGCACCATGCAAAAGCTGCCCAGTTTaGCCAATCAACCTTGATCACAATCTACAACACAGTCCCTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: EFRYSKQAPCKSCPV*PINLDHNLQHSPSD Trigger: ATCCGAGGGACTGTGTTGTAGATTGTGATCAAGGTTGATTGGCAAAACTGGGCAGCTTTTGCATGGTGCCTGCTTACTATATCTGAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481383.1 |
||
| CDS CAA 72 bp | CCTTACATGCTTGAGGTGTACCTCTGGAGAGCAGCTTaGGTGTTTGCCAATACAGAACACAAACAGAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: PYMLEVYLWRAA*VFANTEHKQKL Trigger: TAATTTCTGTTTGTGTTCTGTATTGGCAAACACCAAAGCTGCTCTCCAGAGGTACACCTCAAGCATGTAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479176.5 |
||
| CDS CAA 72 bp | TATAGTAAGCAGGCACCATGCAAAAGCTGCCCAGTTTaGCCAATCAACCTTGATCACAATCTACAACACAGT | + |
|
Preference number: 6 (lower is better) Translates to: YSKQAPCKSCPV*PINLDHNLQHS Trigger: ACTGTGTTGTAGATTGTGATCAAGGTTGATTGGCAAAACTGGGCAGCTTTTGCATGGTGCCTGCTTACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481383.1 |
||
| CDS TCA 72 bp | TTCTCTTTCAGCACGCCTAAGGTTACTAACTGGGACTaGCAACAGTGCTCACATGTAAGGAATTCTCAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FSFSTPKVTNWD*QQCSHVRNSQN Trigger: ATTTTGAGAATTCCTTACATGTGAGCACTGTTGTCAGTCCCAGTTAGTAACCTTAGGCGTGCTGAAAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461044.5 |
||
| CDS TCA 72 bp | CATTTGCTCTTGAATATACCTTTCAATCCGTGTGGGTaGCCTAATTCTTCCTGGATGCCAAACAAGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: HLLLNIPFNPCG*PNSSWMPNKNS Trigger: TGAGTTCTTGTTTGGCATCCAGGAAGAATTAGGTCACCCACACGGATTGAAAGGTATATTCAAGAGCAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469882.5 |
||
| CDS CAA 72 bp | CTTGTTTTTAGCCAAAGTTTCCCTTGGGAGGTTTCTTaGTCTGCTCTGAGACTCAGCTCTAGAAATATAATC | + |
|
Preference number: 6 (lower is better) Translates to: LVFSQSFPWEVS*SALRLSSRNII Trigger: GATTATATTTCTAGAGCTGAGTCTCAGAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAAAACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000305586.11 ENST00000357559.9 ENST00000475315.5 ENST00000480918.5 ENST00000482125.1 |
||
| CDS CAA 90 bp | CATTTCTTTCTTGTTTTTAGCCAAAGTTTCCCTTGGGAGGTTTCTTaGTCTGCTCTGAGACTCAGCTCTAGAAATATAATCTGCAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: HFFLVFSQSFPWEVS*SALRLSSRNIICNC Trigger: ACAGTTGCAGATTATATTTCTAGAGCTGAGTCTCAGAGCAGACAAAGAAACCTCCCAAGGGAAACTTTGGCTAAAAACAAGAAAGAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000305586.11 ENST00000357559.9 ENST00000475315.5 ENST00000480918.5 ENST00000482125.1 |
||
| CDS CAA 72 bp | GCTATTCTTTCAGTGTCAGCCCCAATTATTTGTAACTaGCTACTAAATTACAACCATCAAGTGAAGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AILSVSAPIICN*LLNYNHQVKLP Trigger: TGGGAGCTTCACTTGATGGTTGTAATTTAGTAGCAAGTTACAAATAATTGGGGCTGACACTGAAAGAATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461044.5 |
||
| CDS CAA 90 bp | CTCAATTCTGCTATTCTTTCAGTGTCAGCCCCAATTATTTGTAACTaGCTACTAAATTACAACCATCAAGTGAAGCTCCCATCTTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LNSAILSVSAPIICN*LLNYNHQVKLPSFY Trigger: GTAAAAAGATGGGAGCTTCACTTGATGGTTGTAATTTAGTAGCAAGTTACAAATAATTGGGGCTGACACTGAAAGAATAGCAGAATTGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461044.5 |
||
| CDS CAA 72 bp | TCAAAGATAATAGGGAGTACTAAAAGAACACAAGGTTaGGAATTAGGCAGATGTGAGTTTGATTTCCATCTA | + |
|
Preference number: 6 (lower is better) Translates to: SKIIGSTKRTQG*ELGRCEFDFHL Trigger: TAGATGGAAATCAAACTCACATCTGCCTAATTCCAAACCTTGTGTTCTTTTAGTACTCCCTATTATCTTTGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461801.1 |
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