RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FUT9 (Homo sapiens)

Ensembl gene IDs: ENSG00000172461

Ensembl transcript IDs: ENST00000302103.6, ENST00000483933.5

Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACGTGAATCATGCATACGGATTGAGACAGAGCCTGTGTGTGAGTaGCAGTGTAAATGTCCCCAAAGCTGCATGATTCACCAATTGCAT +
Preference number: 1 (lower is better)
Translates to: GRESCIRIETEPVCE*QCKCPQSCMIHQLH
Trigger: ATGCAATTGGTGAATCATGCAGCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTATGCATGATTCACGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 90 bp GTGCCTAGATCAATGTTAGCTGAATGTCACACACATACACTATCTTaGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCT +
Preference number: 1 (lower is better)
Translates to: VPRSMLAECHTHTLS*LVKSASTVLGLTTP
Trigger: AGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGATAGTGTATGTGTGTGACATTCAGCTAACATTGATCTAGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 90 bp TCCTCTATTCATTACAGGAATATTCCTCTGCTCAAATCTTTCTGGTaGTGGGGTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGG +
Preference number: 1 (lower is better)
Translates to: SSIHYRNIPLLKSFW*WGELILSQDSLDSW
Trigger: CCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAGAGGAATATTCCTGTAATGAATAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 90 bp CTCAAACTAAATAGATCAGCTCTCTGGAGGTGGGGTTTGGACATCTaGAATTTTAAAGCCTCTCCAGATGGTTCTAATGTGCATTCAGGT +
Preference number: 1 (lower is better)
Translates to: LKLNRSALWRWGLDI*NFKASPDGSNVHSG
Trigger: ACCTGAATGCACATTAGAACCATCTGGAGAGGCTTTAAAATTGCAGATGTCCAAACCCCACCTCCAGAGAGCTGATCTATTTAGTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR TCA 90 bp TTAGCCTTTGGATACTGCTTCTGCAGAGACTGCCTTTCTATTTCCTaGACCCTCATTAATCAAAATGGAATGCAGCCATGTGTGGAAAGT +
Preference number: 1 (lower is better)
Translates to: LAFGYCFCRDCLSIS*TLINQNGMQPCVES
Trigger: ACTTTCCACACATGGCTGCATTCCATTTTGATTAATGAGGGTTCAGGAAATAGAAAGGCAGTCTCTGCAGAAGCAGTATCCAAAGGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 90 bp ACTTTACCAAATGTTGAAAAGGGACTTTTGAAAGGACGTGAATCATaGATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAA +
Preference number: 1 (lower is better)
Translates to: TLPNVEKGLLKGRES*IRIETEPVCEWQCK
Trigger: TTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTATGCATGATTCACGTCCTTTCAAAAGTCCCTTTTCAACATTTGGTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 90 bp TCTATTCATTACAGGAATATTCCTCTGCTCAAATCTTTCTGGTGCTaGGGTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATC +
Preference number: 1 (lower is better)
Translates to: SIHYRNIPLLKSFWC*GELILSQDSLDSWI
Trigger: GATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAGAGGAATATTCCTGTAATGAATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 90 bp CAATCCTCTATTCATTACAGGAATATTCCTCTGCTCAAATCTTTCTaGTGCTGGGGTGAGCTTATTCTCTCACAAGATAGTCTGGATAGC +
Preference number: 1 (lower is better)
Translates to: QSSIHYRNIPLLKSF*CWGELILSQDSLDS
Trigger: GCTATCCAGACTATCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAGAGGAATATTCCTGTAATGAATAGAGGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR TCA 90 bp AACACTTCTGGTGATTCTAGGTCAGGTGACCTAGGAAGCATGCTTTaGGTAAAACTGACAGAAAGCAACTGGTGTTTGAGAGGTTATTTT +
Preference number: 1 (lower is better)
Translates to: NTSGDSRSGDLGSML*VKLTESNWCLRGYF
Trigger: AAAATAACCTCTCAAACACCAGTTGCTTTCTGTCAGTTTTACTCAAAGCATGCTTCCTAGGTCACCTGACCTAGAATCACCAGAAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR TCA 90 bp TTTATTTTCCTAATAGTTCCTCCAAGACGAGAACTGGTGATTTCCTaGGGTATGCCTGCATTAGTATTACCTGTGGAACATTTACACCTG +
Preference number: 1 (lower is better)
Translates to: FIFLIVPPRRELVIS*GMPALVLPVEHLHL
Trigger: CAGGTGTAAATGTTCCACAGGTAATACTAATGCAGGCATACCTCAGGAAATCACCAGTTCTCGTCTTGGAGGAACTATTAGGAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 90 bp GGAGAGAGACTATATTTCTCTCCATGTGGTTTGGTAATAGATATCTaGCCTTCACAGTGCTCGCACTTTATACTCTCCTTAAATACTAAT +
Preference number: 1 (lower is better)
Translates to: GERLYFSPCGLVIDI*PSQCSHFILSLNTN
Trigger: ATTAGTATTTAAGGAGAGTATAAAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAATATAGTCTCTCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 90 bp ATACAATGGAATGAAGTTAGGAGAGAGACTATATTTCTCTCCATGTaGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTTAT +
Preference number: 1 (lower is better)
Translates to: IQWNEVRRETIFLSM*FGNRYLPFTVLALY
Trigger: ATAAAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAATATAGTCTCTCTCCTAACTTCATTCCATTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR TCA 90 bp GTGCTAAATCAGCGAGGTACTTACACTGAATTTAGGAAATATGACTaGAGAGAGAGTTTCTTCTTACACATACAGGCTCAAATCCTTTAT +
Preference number: 1 (lower is better)
Translates to: VLNQRGTYTEFRKYD*RESFFLHIQAQILY
Trigger: ATAAAGGATTTGAGCCTGTATGTGTAAGAAGAAACTCTCTCTTCAGTCATATTTCCTAAATTCAGTGTAAGTACCTCGCTGATTTAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTGCAGTGAGCCGAGACTaGACCACTGCACTCCGGCCT +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFAVSRD*TTALRP
Trigger: AGGCCGGAGTGCAGTGGTGCAGTCTCGGCTCACTGC...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCTACAGGAGAATCACTTaGACCTGGGAGGCCGAGGTT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSYRRIT*TWEAEV
Trigger: AACCTCGGCCTCCCAGGTTCAAGTGATTCTCCTGTA...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCCAAGACGAGAACTGGTaGTTTCCTGAGGTATGCCTG +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSQDENW*FPEVCL
Trigger: CAGGCATACCTCAGGAAATCACCAGTTCTCGTCTTG...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAGTGTTGTGCAGACCTaGCCTCAGGTGACTGGCAGT +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFSVVQT*PQVTGS
Trigger: ACTGCCAGTCACCTGAGGTCAGGTCTGCACAACACT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAATAGATCAGCTCTCTaGAGGTGGGGTTTGGACATC +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSNRSAL*RWGLDI
Trigger: GATGTCCAAACCCCACCTCCAGAGAGCTGATCTATT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAAGTCACAAGACTGGTaGGTTCCACGCTCTTGTGTG +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFKSQDW*VPRSCV
Trigger: CACACAAGAGCGTGGAACTCACCAGTCTTGTGACTT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCCCTTATGGAGGAGAATaGTATAGGCAGCTGCAAGTT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSPYGGE*YRQLQV
Trigger: AACTTGCAGCTGCCTATAGCATTCTCCTCCATAAGG...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCCTCAAATCTTTCTGGTaGTGGGGTGAGCTTATTCTC +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSLKSFW*WGELIL
Trigger: GAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAG...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGGTTCTATAAAGCCCTaGACATCATGGTCATATGTG +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSGSIKP*TSWSYV
Trigger: CACATATGACCATGATGTTCAGGGCTTTATAGAACC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTTTCTGGTGCTGGGGTaGGCTTATTCTCTCACAAGA +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPFLVLG*AYSLTR
Trigger: TCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCTTGGGTCAAAAGAGTTaGCAAAGTTTGCAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSLGQKS*QSLQLR
Trigger: TCTGAGCTGCAAACTTTGTCAACTCTTTTGACCCAA...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCTGAGACTGGAGATGTaGTATTGTAACTCTGGCCCA +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFLRLEM*YCNSGP
Trigger: TGGGCCAGAGTTACAATATCACATCTCCAGTCTCAG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCCTAATGAGGCCAATCTaGGACTGGAGATGTGATATT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSLMRPI*DWRCDI
Trigger: AATATCACATCTCCAGTCTCAGATTGGCCTCATTAG...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCCTATTCACCACCACTaGCAGCTCCTCACACCCCTT +
Preference number: 2 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIPIHHH*QLLTPL
Trigger: AAGGGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACCCCTTGTAGTGACATaGCCACATGGAAATGCGCAG +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLPLVVT*PHGNAQ
Trigger: CTGCGCATTTCCATGTGGCCATGTCACTACAAGGGG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 90 bp GGGCTCTTCCTCAAACTAAATAGATCAGCTCTCTGGAGGTGGGGTTaGGACATCTGCAATTTTAAAGCCTCTCCAGATGGTTCTAATGTG +
Preference number: 2 (lower is better)
Translates to: GLFLKLNRSALWRWG*DICNFKASPDGSNV
Trigger: CACATTAGAACCATCTGGAGAGGCTTTAAAATTGCAGATGTCCAAACCCCACCTCCAGAGAGCTGATCTATTTAGTTTGAGGAAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCCCAGAAAATGATCTCTaGGAATCTTCTTGCTATCCT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSPENDL*ESSCYP
Trigger: AGGATAGCAAGAAGATTCTCAGAGATCATTTTCTGG...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCTGGAACTTGGGCTTTaGTCCTTAGTTTACTACTCC +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFLELGL*SLVYYS
Trigger: GGAGTAGTAAACTAAGGATCAAAGCCCAAGTTCCAG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAAGACCTGACCTCAGGTaGCTGGCAGTAGTACTGATT +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLRPDLR*LAVVLI
Trigger: AATCAGTACTACTGCCAGTCACCTGAGGTCAGGTCT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGATAGTCTGGATAGCTaGATCTATGCCCTTTTTACT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSDSLDS*IYALFT
Trigger: AGTAAAAAGGGCATAGATCCAGCTATCCAGACTATC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCACCTTGGACAAGGATaGCATCTTCAGGATTATCTC +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFHLGQG*HLQDYL
Trigger: GAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAGAGCCTGTGTGTGAGTaGCAGTGTAAATGTCCCCAA +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLEPVCE*QCKCPQ
Trigger: TTGGGGACATTTACACTGCCACTCACACACAGGCTC...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 90 bp CCTAGATCAATGTTAGCTGAATGTCACACACATACACTATCTTGGTaGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCAT +
Preference number: 2 (lower is better)
Translates to: PRSMLAECHTHTLSW*VKSASTVLGLTTPH
Trigger: ATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGATAGTGTATGTGTGTGACATTCAGCTAACATTGATCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCCGAAGTTCTTCTACATaGGGTGTACCATTCTATAGG +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPRSSST*GVPFYR
Trigger: CCTATAGAATGGTACACCTCATGTAGAAGAACTTCG...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTTAAAGGAGTGGCTGTaGACCATACACTTTCTTGAG +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPLKEWL*TIHFLE
Trigger: CTCAAGAAAGTGTATGGTTCACAGCCACTCCTTTAA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAATCTGCCCTTCACAGTaGTCGCACTTTATACTCTCC +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLICPSQ*SHFILS
Trigger: GGAGAGTATAAAGTGCGAGCACTGTGAAGGGCAGAT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTTTCCTGAGGTATGCCTaGATTAGTATTACCTGTGGA +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFFLRYA*ISITCG
Trigger: TCCACAGGTAATACTAATGCAGGCATACCTCAGGAA...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTGACCAGTTGCATTTCTaGAAGCACACATTACTTCCT +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFDQLHF*KHTLLP
Trigger: AGGAAGTAATGTGTGCTTGCAGAAATGCAACTGGTC...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGTAATTTTGACCAGTTaGATTTCTGCAAGCACACAT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSVILTS*ISASTH
Trigger: ATGTGTGCTTGCAGAAATGCAACTGGTCAAAATTAC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTCAGCTCTCTGGAGGTaGGGTTTGGACATCTGCAAT +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELSALWR*GLDICN
Trigger: ATTGCAGATGTCCAAACCCCACCTCCAGAGAGCTGA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCCACCTGTTAGACTTCTaGGCTCTTCCTCAAACTAAA +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPHLLDF*ALPQTK
Trigger: TTTAGTTTGAGGAAGAGCCCAGAAGTCTAACAGGTG...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAGTGGACCAGCTGAAGTaGTGGATTAAGTCAAACTGT +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLVDQLK*WIKSNC
Trigger: ACAGTTTGACTTAATCCATCACTTCAGCTGGTCCAC...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATTCACCTACGATCTCTaGTTATATCCAGCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLFTYDL*LYPALL
Trigger: GAGGAGAGCTGGATATAAGCAGAGATCGTAGGTGAA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCAGTACTGCCTCTACTTaGGTCATATTATCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPSTAST*VILSVC
Trigger: ACACACTGATAATATGACGCAAGTAGAGGCAGTACT...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAATTTCTCAGAAATATaGTACCTCTGCTTTACAGCT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSNFSEI*YLCFTA
Trigger: AGCTGTAAAGCAGAGGTAGCATATTTCTGAGAAATT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCTTTCTAAAGTATTATTaGGATTACTTCCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSFLKYY*DYFPGA
Trigger: AGCACCTGGGAAGTAATCCCAATAATACTTTAGAAA...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 90 bp GTCTATCCACTTAATTGTAAGCTCATTTTAGGCAGTGATAGTACCTaGTTCATCTTATCTCTGTGGGTGTTAAGGCAGTGCCTGACACTG +
Preference number: 2 (lower is better)
Translates to: VYPLNCKLILGSDST*FILSLWVLRQCLTL
Trigger: CAGTGTCAGGCACTGCCTTAACACCCACAGAGATAAGATGAACAAGGTACTATCACTGCCTAAAATGAGCTTACAATTAAGTGGATAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 90 bp ATGTATTCCATCCTAGATGAGCTCATATCCTCTGGCAATCTCACCTaGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: MYSILDELISSGNLT*DKDGIFRIISFKEL
Trigger: CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATTGCCAGAGGATATGAGCTCATCTAGGATGGAATACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAATGATTGCTCATGCTaGGCTTTTAAAAATCTCCAC +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFNDCSC*AFKNLH
Trigger: GTGGAGATTTTTAAAAGCTCAGCATGAGCAATCATT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAGAGCCAAGGCAGGTTaGAATAATATTGAATGCTTT +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFRAKAG*NNIECF
Trigger: AAAGCATTCAATATTATTTCAACCTGCCTTGGCTCT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCATCTACACAGAGAAATaGGAAGGAAATCTGTATGGA +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPIYTEK*EGNLYG
Trigger: TCCATACAGATTTCCTTCTCATTTCTCTGTGTAGAT...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACTAGGAAGCATGCTTTaGGTAAAACTGACAGAAAGC +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLLGSML*VKLTES
Trigger: GCTTTCTGTCAGTTTTACTCAAAGCATGCTTCCTAG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTTGGTAATAGATATCTaGCCTTCACAGTGCTCGCAC +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELLVIDI*PSQCSH
Trigger: GTGCGAGCACTGTGAAGGGCAGATATCTATTACCAA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATGGGGTTTGGACATCTaGAATTTTAAAGCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLWGLDI*NFKASP
Trigger: TGGAGAGGCTTTAAAATTGCAGATGTCCAAACCCCA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTCTCACAAGATAGTCTaGATAGCTGGATCTATGCCC +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELSHKIV*IAGSMP
Trigger: GGGCATAGATCCAGCTATCCAGACTATCTTGTGAGA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGCTGCTCAAATCTTTCTaGTGCTGGGGTGAGCTTATT +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELLLKSF*CWGELI
Trigger: AATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAG...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCCTGATTGCAATACAATaGAATGAAGTTAGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPLIAIQ*NEVRRE
Trigger: CTCTCTCCTAACTTCATTCCATTGTATTGCAATCAG...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATCTGGAGGTGGGGTTTaGACATCTGCAATTTTAAAG +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLSGGGV*TSAILK
Trigger: CTTTAAAATTGCAGATGTCCAAACCCCACCTCCAGA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGCAGACAAGGAGACTTTaGAACCCAAGAATGTGGTCT +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELQTRRL*NPRMWS
Trigger: AGACCACATTCTTGGGTTCCAAAGTCTCCTTGTCTG...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCGCAGCATTGTTTATTaGCTCATTAGCACTATGAAT +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFRSIVY*LISTMN
Trigger: ATTCATAGTGCTAATGAGCCAATAAACAATGCTGCG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGGAGGAATGTTTTCCTTaGAGAATCCTTAATGGCCCA +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELEECFP*RILNGP
Trigger: TGGGCCATTAAGGATTCTTCAAGGAAAACATTCCTC...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTAGTCTCAGGCTGAATTaGAAGGAAGCTTTTATATGT +
Preference number: 2 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALSLRLN*KEAFIC
Trigger: ACATATAAAAGCTTCCTTTCAATTCAGCCTGAGACT...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTGGCAAGTGGATCATTTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSGKWII*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAATGATCCACTTGCC...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTAGTTCTTTCAAATCATaGACATTCACTAGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALSSFKS*TFTRAK
Trigger: CTTGGCTCTAGTGAATGTTCATGATTTGAAAGAACT...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACCCATTTCCTTCTGCTaGACTCAACTCCTAAAATAT +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLPISFC*TQLLKY
Trigger: ATATTTTAGGAGTTGAGTTCAGCAGAAGGAAATGGG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATTATACAGCAGATTGTaGAAACTGGAACTTGGGCTT +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLLYSRL*KLELGL
Trigger: AAGCCCAAGTTCCAGTTTTCACAATCTGCTGTATAA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTCCTCTGTTATAGTATaGAAAGTTGGAACTAGACAT +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPSSVIV*KVGTRH
Trigger: ATGTCTAGTTCCAACTTTGCATACTATAACAGAGGA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTTTCATCCAACAAATGTaGATTGAGATCTTACTGTGT +
Preference number: 2 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFFIQQM*IEILLC
Trigger: ACACAGTAAGATCTCAATGCACATTTGTTGGATGAA...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCAATGGTAGGTTTATTTaGTTCTATAAAGCCCTGAAC +
Preference number: 2 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPNGRFI*FYKALN
Trigger: GTTCAGGGCTTTATAGAACCAAATAAACCTACCATT...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAACCCATCTAAACAGGTaGGATGAAAACCTCAAAACT +
Preference number: 2 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLTHLNR*DENLKT
Trigger: AGTTTTGAGGTTTTCATCCCACCTGTTTAGATGGGT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 90 bp AATGGAATGAAGTTAGGAGAGAGACTATATTTCTCTCCATGTGGTTaGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTTATACTC +
Preference number: 2 (lower is better)
Translates to: NGMKLGERLYFSPCG*VIDICPSQCSHFIL
Trigger: GAGTATAAAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAATATAGTCTCTCTCCTAACTTCATTCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 90 bp GTTTACTACTCCTCTTCTTGTTTCTTGTTGACACTTTTCTCCTTTTaGCCGCTTTGTGAACTTGAATCTAGGTACAGACTTGTTAGCTCC +
Preference number: 2 (lower is better)
Translates to: VYYSSSCFLLTLFSF*PLCELESRYRLVSS
Trigger: GGAGCTAACAAGTCTGTACCTAGATTCAAGTTCACAAAGCGGCAAAAAGGAGAAAAGTGTCAACAAGAAACAAGAAGAGGAGTAGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTTACTTCCCAGGTGCTaGAAATCACAACAAATTGGA +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELLLPRC*KSQQIG
Trigger: TCCAATTTGTTGTGATTTTCAGCACCTGGGAAGTAA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGGGAACTCAAAGATATaGTCAAACACAGTCATAAGG +
Preference number: 2 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIGNSKI*SNTVIR
Trigger: CCTTATGACTGTGTTTGATCATATCTTTGAGTTCCC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCAATTAAGATGTCAGTaGGCAGTGAGTTCAAAAGTC +
Preference number: 2 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIQLRCQ*AVSSKV
Trigger: GACTTTTGAACTCACTGCTCACTGACATCTTAATTG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCAGGGTGTAATACTCTaGATGTGGACAATTCAGTAT +
Preference number: 2 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIQGVIL*MWTIQY
Trigger: ATACTGAATTGTCCACATCCAGAGTATTACACCCTG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGCACATAGCTAGTGAATaGCAGACCTTGGATTCAATT +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELHIASE*QTLDSI
Trigger: AATTGAATCCAAGGTCTGCCATTCACTAGCTATGTG...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGAAATATGCTACCTCTaGTTTACAGCTGCAAAATCT +
Preference number: 2 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIEICYL*FTAAKS
Trigger: AGATTTTGCAGCTGTAAAGCAGAGGTAGCATATTTC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 90 bp ACTATGAATAACATTTTCACTTTACCAAATGTTGAAAAGGGACTTTaGAAAGGACGTGAATCATGCATACGGATTGAGACAGAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: TMNNIFTLPNVEKGL*KGRESCIRIETEPV
Trigger: CACAGGCTCTGTCTCAATCCGTATGCATGATTCACGTCCTTTCAAAAGTCCCTTTTCAACATTTGGTAAAGTGAAAATGTTATTCATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGGAACATTCTAATTTTTaGGTGGATTATTGGCCTGAA +
Preference number: 2 (lower is better)
Translates to: NLTLDKDGIFRIISFKELEHSNF*VDYWPE
Trigger: TTCAGGCCAATAATCCACCCAAAAATTAGAATGTTC...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTAAATCTTTCTGGTGCTaGGGTGAGCTTATTCTCTCA +
Preference number: 2 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSKSFWC*GELILS
Trigger: TGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR TCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCCATTAAATCAGCATTaGCCCATACAAACGTCATTC +
Preference number: 2 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSPLNQH*PIQTSF
Trigger: GAATGACGTTTGTATGGGTCAATGCTGATTTAATGG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR GCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTAGAGTTGACAAAGTTTaGAGCTCAGAAACATGTCAA +
Preference number: 2 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSRVDKV*SSETCQ
Trigger: TTGACATGTTTCTGAGCTGCAAACTTTGTCAACTCT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTACAAATAGACCCAAATaGATGTCTCAGAACATTCTA +
Preference number: 2 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSTNRPK*MSQNIL
Trigger: TAGAATGTTCTGAGACATCCATTTGGGTCTATTTGT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp TCATGCATACGGATTGAGACAGAGCCTGTGTGTGAGTaGCAGTGTAAATGTCCCCAAAGCTGCATGATTCAC +
Preference number: 3 (lower is better)
Translates to: SCIRIETEPVCE*QCKCPQSCMIH
Trigger: GTGAATCATGCAGCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTATGCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTTGCCGCTTTGTGAACTaGAATCTAGGTACAGACTTG +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFCRFVN*NLGTDL
Trigger: CAAGTCTGTACCTAGATTCAAGTTCACAAAGCGGCA...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp TCTGGGCTCTTCCTCAAACTAAATAGATCAGCTCTCTaGAGGTGGGGTTTGGACATCTGCAATTTTAAAGCC +
Preference number: 3 (lower is better)
Translates to: SGLFLKLNRSAL*RWGLDICNFKA
Trigger: GGCTTTAAAATTGCAGATGTCCAAACCCCACCTCCAGAGAGCTGATCTATTTAGTTTGAGGAAGAGCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTTTCTCTCCATGTGGTTaGGTAATAGATATCTGCCCT +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFFSPCG*VIDICP
Trigger: AGGGCAGATATCTATTACCAAACCACATGGAGAGAA...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCCCTAGGAAGCATGCTTaGAGTAAAACTGACAGAAAG +
Preference number: 3 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPPRKHA*SKTDRK
Trigger: CTTTCTGTCAGTTTTACTCAAAGCATGCTTCCTAGG...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTACTGGAACTTGGGCTTaGATCCTTAGTTTACTACTC +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFTGTWA*ILSLLL
Trigger: GAGTAGTAAACTAAGGATCAAAGCCCAAGTTCCAGT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 72 bp AATAGATCAGCTCTCTGGAGGTGGGGTTTGGACATCTaGAATTTTAAAGCCTCTCCAGATGGTTCTAATGTG +
Preference number: 3 (lower is better)
Translates to: NRSALWRWGLDI*NFKASPDGSNV
Trigger: CACATTAGAACCATCTGGAGAGGCTTTAAAATTGCAGATGTCCAAACCCCACCTCCAGAGAGCTGATCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 72 bp AATGTTGAAAAGGGACTTTTGAAAGGACGTGAATCATaGATACGGATTGAGACAGAGCCTGTGTGTGAGTGG +
Preference number: 3 (lower is better)
Translates to: NVEKGLLKGRES*IRIETEPVCEW
Trigger: CCACTCACACACAGGCTCTGTCTCAATCCGTATGCATGATTCACGTCCTTTCAAAAGTCCCTTTTCAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp GGTGCTGGGGTGAGCTTATTCTCTCACAAGATAGTCTaGATAGCTGGATCTATGCCCTTTTTACTGAATTCT +
Preference number: 3 (lower is better)
Translates to: GAGVSLFSHKIV*IAGSMPFLLNS
Trigger: AGAATTCAGTAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCACCCCAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp TCAATGTTAGCTGAATGTCACACACATACACTATCTTaGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTG +
Preference number: 3 (lower is better)
Translates to: SMLAECHTHTLS*LVKSASTVLGL
Trigger: CAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGATAGTGTATGTGTGTGACATTCAGCTAACATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTTCCAACAAATGTGCATaGAGATCTTACTGTGTGCTA +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFSNKCA*RSYCVL
Trigger: TAGCACACAGTAAGATCTCAATGCACATTTGTTGGA...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAGGCAGTGATAGTACCTaGTTCATCTTATCTCTGTGG +
Preference number: 3 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLGSDST*FILSLW
Trigger: CCACAGAGATAAGATGAACAAGGTACTATCACTGCC...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACTCTGGAGGTGGGGTTaGGACATCTGCAATTTTAAA +
Preference number: 3 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLLWRWG*DICNFK
Trigger: TTTAAAATTGCAGATGTCCAAACCCCACCTCCAGAG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTGACCAGTCTTTCCTGTaGCAAAATATAAACATGCAG +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFDQSFL*QNINMQ
Trigger: CTGCATGTTTATATTTTGCAACAGGAAAGACTGGTC...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTTCAGACAAGGAGACTTaGGAACCCAAGAATGTGGTC +
Preference number: 3 (lower is better)
Translates to: VTLAHISHIMSGSPGLLISDKET*EPKNVV
Trigger: GACCACATTCTTGGGTTCCAAAGTCTCCTTGTCTGA...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 72 bp CATTACAGGAATATTCCTCTGCTCAAATCTTTCTGGTaGTGGGGTGAGCTTATTCTCTCACAAGATAGTCTG +
Preference number: 3 (lower is better)
Translates to: HYRNIPLLKSFW*WGELILSQDSL
Trigger: CAGACTATCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAGAGGAATATTCCTGTAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp TACAGGAATATTCCTCTGCTCAAATCTTTCTGGTGCTaGGGTGAGCTTATTCTCTCACAAGATAGTCTGGAT +
Preference number: 3 (lower is better)
Translates to: YRNIPLLKSFWC*GELILSQDSLD
Trigger: ATCCAGACTATCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAGAGGAATATTCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAGAACTGTCACTTCCTaGAAACAATCATTTTTCTGG +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFRTVTS*KQSFFW
Trigger: CCAGAAAAATGATTGTTTCAAGGAAGTGACAGTTCT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGTTGGGTCAAAAGAGTaGACAAAGTTTGCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIVGSKE*TKFAAQ
Trigger: CTGAGCTGCAAACTTTGTCAACTCTTTTGACCCAAC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTGTGAAGCATACCCATTaGCAAAATGCTACAAAATCT +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFVKHTH*QNATKS
Trigger: AGATTTTGTAGCATTTTGCAAATGGGTATGCTTCAC...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGATTGTTAGCCTGGGATaGCCTCAGGTATTTCCAATG +
Preference number: 3 (lower is better)
Translates to: NLTLDKDGIFRIISFKELIVSLG*PQVFPM
Trigger: CATTGGAAATACCTGAGGCAATCCCAGGCTAACAAT...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCTTAAAATAACCCTATaGGGTCTGCATCGCAATAAT +
Preference number: 3 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFLKITL*GLHRNN
Trigger: ATTATTGCGATGCAGACCCAATAGGGTTATTTTAAG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR TCA 72 bp AAGGTGGCTAATGAGGCCAATCTGAGACTGGAGATGTaGTATTGTAACTCTGGCCCATATTTCTCACATAAT +
Preference number: 3 (lower is better)
Translates to: KVANEANLRLEM*YCNSGPYFSHN
Trigger: ATTATGTGAGAAATATGGGCCAGAGTTACAATATCACATCTCCAGTCTCAGATTGGCCTCATTAGCCACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCCCATTAAATCAGCATaGACCCATACAAACGTCATT +
Preference number: 3 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIPIKSA*THTNVI
Trigger: AATGACGTTTGTATGGGTCAATGCTGATTTAATGGG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGAGTGAATGGCAGACCTaGGATTCAATTCTAAATCTG +
Preference number: 3 (lower is better)
Translates to: NLTLDKDGIFRIISFKELSEWQT*DSILNL
Trigger: CAGATTTAGAATTGAATCCAAGGTCTGCCATTCACT...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 72 bp CTATATTTCTCTCCATGTGGTTTGGTAATAGATATCTaGCCTTCACAGTGCTCGCACTTTATACTCTCCTTA +
Preference number: 3 (lower is better)
Translates to: LYFSPCGLVIDI*PSQCSHFILSL
Trigger: TAAGGAGAGTATAAAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAATATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp ATTCATTACAGGAATATTCCTCTGCTCAAATCTTTCTaGTGCTGGGGTGAGCTTATTCTCTCACAAGATAGT +
Preference number: 3 (lower is better)
Translates to: IHYRNIPLLKSF*CWGELILSQDS
Trigger: ACTATCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAGAGGAATATTCCTGTAATGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp AATGAAGTTAGGAGAGAGACTATATTTCTCTCCATGTaGTTTGGTAATAGATATCTGCCCTTCACAGTGCTC +
Preference number: 3 (lower is better)
Translates to: NEVRRETIFLSM*FGNRYLPFTVL
Trigger: GAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAATATAGTCTCTCTCCTAACTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTTTTTCTAAAGTATTATaGGGATTACTTCCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIFSKVL*GLLPRC
Trigger: GCACCTGGGAAGTAATCCCAATAATACTTTAGAAAA...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR TCA 72 bp AATTGCAACCCACAGGATTTATTAAAGGAGTGGCTGTaGACCATACACTTTCTTGAGGGTTGTATTTCACTT +
Preference number: 3 (lower is better)
Translates to: NCNPQDLLKEWL*TIHFLEGCISL
Trigger: AAGTGAAATACAACCCTCAAGAAAGTGTATGGTTCACAGCCACTCCTTTAATAAATCCTGTGGGTTGCAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR TCA 72 bp AGACAATCAGATAATCTTCATTTGCTTAAGGACTCTTaGGGCAGAAAACCAGTAAATGAAAAGCCTGATCTC +
Preference number: 3 (lower is better)
Translates to: RQSDNLHLLKDS*GRKPVNEKPDL
Trigger: GAGATCAGGCTTTTCATTTACTGGTTTTCTGCCTCAAGAGTCCTTAAGCAAATGAAGATTATCTGATTGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR GCA 72 bp CCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTaGTCGCACTTTATACTCTCCTTAAATACTAATTTT +
Preference number: 3 (lower is better)
Translates to: PCGLVIDICPSQ*SHFILSLNTNF
Trigger: AAAATTAGTATTTAAGGAGAGTATAAAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp GTGGTTAGAAGAGATAATACGGAGAGAATAATATGTTaGGTCAAAAGAGTTGACAAAGTTTGCAGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: VVRRDNTERIIC*VKRVDKVCSSE
Trigger: TTCTGAGCTGCAAACTTTGTCAACTCTTTTGACCCAACATATTATTCTCTCCGTATTATCTCTTCTAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp TCTCAATTGCAAATTACCTATCAGACAAGGAGACTTTaGAACCCAAGAATGTGGTCTCTTAAACACATACAA +
Preference number: 3 (lower is better)
Translates to: SQLQITYQTRRL*NPRMWSLKHIQ
Trigger: TTGTATGTGTTTAAGAGACCACATTCTTGGGTTCCAAAGTCTCCTTGTCTGATAGGTAATTTGCAATTGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTAGGTGCTTTCTAAACTaGTTAGCAGTGTATCCTCTT +
Preference number: 3 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSRCFLN*LAVYPL
Trigger: AAGAGGATACACTGCTAACAAGTTTAGAAAGCACCT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTAATTATGCTATTTTATaGTTAGCCTGGGATTGCCTC +
Preference number: 3 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSNYAIL*LAWDCL
Trigger: GAGGCAATCCCAGGCTAACAATAAAATAGCATAATT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp GGCTCTCATGTCTTTCTTGTTCAGGGTGTAATACTCTaGATGTGGACAATTCAGTATATATTCTTATTAGTA +
Preference number: 3 (lower is better)
Translates to: GSHVFLVQGVIL*MWTIQYIFLLV
Trigger: TACTAATAAGAATATATACTGAATTGTCCACATCCAGAGTATTACACCCTGAACAAGAAAGACATGAGAGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CCA 72 bp CATGTCTTTCTTGTTCAGGGTGTAATACTCTGGATGTaGACAATTCAGTATATATTCTTATTAGTAAGGTCT +
Preference number: 3 (lower is better)
Translates to: HVFLVQGVILWM*TIQYIFLLVRS
Trigger: AGACCTTACTAATAAGAATATATACTGAATTGTCCACATCCAGAGTATTACACCCTGAACAAGAAAGACATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAGGGCCAGGCGGCGGTaGCGGCGCTGTCCTAAGAGC +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSRARRR*RRCPKS
Trigger: GCTCTTAGGACAGCGCCGCCACCGCCGCCTGGCCCT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGGCCGCGCGCGCTCTCTaGCCATCTCCGGCTTCGCTG +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELAARAL*PSPASL
Trigger: CAGCGAAGCCGGAGATGGGCAGAGAGCGCGCGCGGC...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGAGCGCGACTGGGGCTaGGGGACACCGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIERDWG*GTPRQR
Trigger: TCGCTGCCTCGGTGTCCCCCAGCCCCAGTCGCGCTC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAGTGTTGTGCAGACCTaGCCTCAGGTGACTGGCAGT +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSSVVQT*PQVTGS
Trigger: ACTGCCAGTCACCTGAGGTCAGGTCTGCACAACACT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGCTTTGCTCCCAGGATaGAGCAGGACTCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSALLPG*SRTQLH
Trigger: ATGCAGCTGAGTCCTGCTGCATCCTGGGAGCAAAGC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATGCAGGGGAGAGCAGTaGATCTGGAGCTGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLCRGEQ*IWSCCA
Trigger: GGCGCAGCAGCTCCAGATTCACTGCTCTCCCCTGCA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAGCAGTGAGCCGAGACTaGACCACTGCACTCCGGCCT +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLAVSRD*TTALRP
Trigger: AGGCCGGAGTGCAGTGGTGCAGTCTCGGCTCACTGC...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGGCAAGTGGATCATTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSGKWII*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAATGATCCACTTGCC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAAAGGTCTGCCCAAATaGCCACACCCACACCAGAAT +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSKGLPK*PHPHQN
Trigger: ATTCTGGTGTGGGTGTGGCCATTTGGGCAGACCTTT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCGTAAGGTCAAAGGTCTaGCCAAATGGCCACACCCAC +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPVRSKV*PNGHTH
Trigger: GTGGGTGTGGCCATTTGGGCAGACCTTTGACCTTAC...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCTACTTGACTCTGGCATaGTCAGGGTTCCAGTTACTC +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSYLTLA*SGFQLL
Trigger: GAGTAACTGGAACCCTGAGCATGCCAGAGTCAAGTA...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCCTCTTTTGGGGAGTGTaGGTTGGTGATTCCAAATTC +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSLFWGV*VGDSKF
Trigger: GAATTTGGAATCACCAACTCACACTCCCCAAAAGAG...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCCAAGACGAGAACTGGTaGTTTCCTGAGGTATGCCTG +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPQDENW*FPEVCL
Trigger: CAGGCATACCTCAGGAAATCACCAGTTCTCGTCTTG...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAGTGATTACACTGGTTaGCTGTCAAGACTGCCTAGA +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSSDYTG*LSRLPR
Trigger: TCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCTTCACCTACGATCTCTaGTTATATCCAGCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSFTYDL*LYPALL
Trigger: GAGGAGAGCTGGATATAAGCAGAGATCGTAGGTGAA...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCGAGCCTGTGTGTGAGTaGCAGTGTAAATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPEPVCE*QCKCPQ
Trigger: TTGGGGACATTTACACTGCCACTCACACACAGGCTC...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTTGTCAGATCCCAACTaGTGTCTCGGTGATGGATCA +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPLSDPN*CLGDGS
Trigger: TGATCCATCACCGAGACATCAGTTGGGATCTGACAA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTAGACCTGACCTCAGGTaGCTGGCAGTAGTACTGATT +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALRPDLR*LAVVLI
Trigger: AATCAGTACTACTGCCAGTCACCTGAGGTCAGGTCT...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCTGGCAATCTCACCTTaGACAAGGATGGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFLAISP*TRMASS
Trigger: TGAAGATGCCATCCTTGTCCAAGGTGAGATTGCCAG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCACACATACACTATCTTaGTTGGTAAAGTCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSTHTLS*LVKSAS
Trigger: AGACGCCGACTTTACCAACCAAGATAGTGTATGTGT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGTGAACGGTCCGTTGTaGGATGGCATCCTTGGATGT +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIVNGPL*DGILGC
Trigger: ACATCCAAGGATGCCATCTCACAACGGACCGTTCAC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAGGTGGCCTAGCTTGCTaGGGTAAATTTGTCAGATCC +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLGGLAC*GKFVRS
Trigger: GGATCTGACAAATTTACCTCAGCAAGCTAGGCCACC...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTGCTCATTGTAATACTTaGCTCTGGCATGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALAHCNT*LWHAQG
Trigger: ACCCTGAGCATGCCAGAGTCAAGTATTACAATGAGC...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAGCCAAACATGCATGTaGTTCCCAAAATCGTGGAAG +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFSQTCM*FPKSWK
Trigger: CTTCCACGATTTTGGGAATCACATGCATGTTTGGCT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTTACAGGAGAATCACTTaGACCTGGGAGGCCGAGGTT +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIYRRIT*TWEAEV
Trigger: AACCTCGGCCTCCCAGGTTCAAGTGATTCTCCTGTA...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGGGAACTCAAAGATATaGTCAAACACAGTCATAAGG +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSGNSKI*SNTVIR
Trigger: CCTTATGACTGTGTTTGATCATATCTTTGAGTTCCC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAAAGTCACAAGACTGGTaGGTTCCACGCTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLKSQDW*VPRSCV
Trigger: CACACAAGAGCGTGGAACTCACCAGTCTTGTGACTT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCGTATTCCATCCTAGATaGGCTCATATCCTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPVFHPR*AHILWQ
Trigger: TTGCCAGAGGATATGAGCTCATCTAGGATGGAATAC...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCACACGAAGGGATTTGTaGTTACCGTCAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPTRRDL*LPSRSH
Trigger: ATGGCTTCTTGACGGTAAGCACAAATCCCTTCGTGT...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCGTGAGATGGCATCCTTaGATGTTGAACATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPVRWHP*MLNIAW
Trigger: CCAAGCAATGTTCAACATCCAAGGATGCCATCTCAC...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGGCATCCTTGGATGTTaGACATTGCTTGGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIGILGC*TLLGRM
Trigger: CATCCTGCCAAGCAATGTTCAACATCCAAGGATGCC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTACAACTGATGTCTCGGTaGTGGATCAGAACTGCATGG +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLQLMSR*WIRTAW
Trigger: CCATGCAGTTCTGATCCATCACCGAGACATCAGTTG...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAAGGCACTTGGATATCTaGATCACGGCGGTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLRHLDI*ITAVSQ
Trigger: CTGACTTACCGCCGTGATTCAGATATCCAAGTGCCT...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAGTCTCAGGCTGAATTaGAAGGAAGCTTTTATATGT +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSSLRLN*KEAFIC
Trigger: ACATATAAAAGCTTCCTTTCAATTCAGCCTGAGACT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTTGGGTCAAAAGAGTTaGCAAAGTTTGCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPLGQKS*QSLQLR
Trigger: TCTGAGCTGCAAACTTTGTCAACTCTTTTGACCCAA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCGAAGTTCTTCTACATaGGGTGTACCATTCTATAGG +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFRSSST*GVPFYR
Trigger: CCTATAGAATGGTACACCTCATGTAGAAGAACTTCG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCATCTACACAGAGAAATaGGAAGGAAATCTGTATGGA +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSIYTEK*EGNLYG
Trigger: TCCATACAGATTTCCTTCTCATTTCTCTGTGTAGAT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCTAATGAGGCCAATCTaGGACTGGAGATGTGATATT +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFLMRPI*DWRCDI
Trigger: AATATCACATCTCCAGTCTCAGATTGGCCTCATTAG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTTCTCATTTAAGGAACTaGAGGTGGCTAATGAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALSHLRN*RWLMRP
Trigger: TGGCCTCATTAGCCACCTTCAGTTCCTTAAATGAGA...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTCATGGGAGGAGAGATaGTTGATCCACACATATTAC +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPSWEER*LIHTYY
Trigger: GTAATATGTGTGGATCAATCATCTCTCCTCCCATGA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTCCTTATGGAGGAGAATaGTATAGGCAGCTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALPYGGE*YRQLQV
Trigger: AACTTGCAGCTGCCTATAGCATTCTCCTCCATAAGG...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAGAGTTGACAAAGTTTaGAGCTCAGAAACATGTCAA +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSRVDKV*SSETCQ
Trigger: TTGACATGTTTCTGAGCTGCAAACTTTGTCAACTCT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGAAATATGCTACCTCTaGTTTACAGCTGCAAAATCT +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSEICYL*FTAAKS
Trigger: AGATTTTGCAGCTGTAAAGCAGAGGTAGCATATTTC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCAAAGGACGTGAATCATaGATACGGATTGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPKGRES*IRIETE
Trigger: CTCTGTCTCAATCCGTATGCATGATTCACGTCCTTT...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTTTTGAATTAATGCTTTaGTCCCAGGATGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFFELML*SQDAAG
Trigger: TCCTGCTGCATCCTGGGAGCAAAGCATTAATTCAAA...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTTCAGCTCTCTGGAGGTaGGGTTTGGACATCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLISALWR*GLDICN
Trigger: ATTGCAGATGTCCAAACCCCACCTCCAGAGAGCTGA...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTCACCTTGGACAAGGATaGCATCTTCAGGATTATCTC +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALHLGQG*HLQDYL
Trigger: GAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTG...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCGCTGTTAAATTGAACTaGAAGGAACCAATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSAVKLN*KEPIFC
Trigger: ACAGAAGATTGGTTCCTTCCAGTTCAATTTAACAGC...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCCTCCAGTTTAATTTGTaGAAAACACGAGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSLQFNL*KTRVLQ
Trigger: TTGGAGAACTCGTGTTTTCCACAAATTAAACTGGAG...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 72 bp ATGTTAGCTGAATGTCACACACATACACTATCTTGGTaGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACT +
Preference number: 4 (lower is better)
Translates to: MLAECHTHTLSW*VKSASTVLGLT
Trigger: AGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGATAGTGTATGTGTGTGACATTCAGCTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTGGTTCTATAAAGCCCTaGACATCATGGTCATATGTG +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALGSIKP*TSWSYV
Trigger: CACATATGACCATGATGTTCAGGGCTTTATAGAACC...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTGAGGAATGTTTTCCTTaGAGAATCCTTAATGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALEECFP*RILNGP
Trigger: TGGGCCATTAAGGATTCTTCAAGGAAAACATTCCTC...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTTTCTGGTGCTGGGGTaGGCTTATTCTCTCACAAGA +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELFLVLG*AYSLTR
Trigger: TCTTGTGAGAGAATAAGCTCACCCCAGCACCAGAAA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCCCATTAAATCAGCATTaGCCCATACAAACGTCATTC +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPPLNQH*PIQTSF
Trigger: GAATGACGTTTGTATGGGTCAATGCTGATTTAATGG...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATGCTATCCTATTCTGTaGCATGCGCTATACCAACTG +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLCYPIL*HALYQL
Trigger: CAGTTGGTATAGCGCATGTCACAGAATAGGATAGCA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACTGGAACTTGGGCTTTaGTCCTTAGTTTACTACTCC +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLLELGL*SLVYYS
Trigger: GGAGTAGTAAACTAAGGATCAAAGCCCAAGTTCCAG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTTTATACAGCAGATTGTaGAAACTGGAACTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFLYSRL*KLELGL
Trigger: AAGCCCAAGTTCCAGTTTTCACAATCTGCTGTATAA...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGGTCCCCAAAGCTGCATaGTTCACCAATTGCATGCAA +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELVPKAA*FTNCMQ
Trigger: TTGCATGCAATTGGTGAATCATGCAGCTTTGGGGAC...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCAGGACTCAGCTGCATaGTTTTCACTTGGAATAATA +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFQDSAA*FSLGII
Trigger: TATTATTCCAAGTGAAAATCATGCAGCTGAGTCCTG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTCTAGAAAGACATCCATaGGAAGGAATCCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALLERHP*EGIHVV
Trigger: CACAACATGGATTCCTTCTCATGGATGTCTTTCTAG...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTTTGGATGTTGAACATTaGTTGGCAGGATGTAAGGTC +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALLDVEH*LAGCKV
Trigger: GACCTTACATCCTGCCAAGCAATGTTCAACATCCAA...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACTCAAATCTTTCTGGTaGTGGGGTGAGCTTATTCTC +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLLKSFW*WGELIL
Trigger: GAGAATAAGCTCACCCCAGCACCAGAAAGATTTGAG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCCTATTCACCACCACTaGCAGCTCCTCACACCCCTT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSPIHHH*QLLTPL
Trigger: AAGGGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCAAATGTCCCCAAAGCTaGATGATTCACCAATTGCAT +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPKCPQS*MIHQLH
Trigger: ATGCAATTGGTGAATCATGCAGCTTTGGGGACATTT...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCACAAATAGACCCAAATaGATGTCTCAGAACATTCTA +
Preference number: 4 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSTNRPK*MSQNIL
Trigger: TAGAATGTTCTGAGACATCCATTTGGGTCTATTTGT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATCTCACAAGATAGTCTaGATAGCTGGATCTATGCCC +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLSHKIV*IAGSMP
Trigger: GGGCATAGATCCAGCTATCCAGACTATCTTGTGAGA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTAAATCTTTCTGGTGCTaGGGTGAGCTTATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALKSFWC*GELILS
Trigger: TGAGAGAATAAGCTCACCCCAGCACCAGAAAGATTT...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCACATAGCTAGTGAATaGCAGACCTTGGATTCAATT +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFHIASE*QTLDSI
Trigger: AATTGAATCCAAGGTCTGCCATTCACTAGCTATGTG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTGCAGATTGTGAAAACTaGAACTTGGGCTTTGATCCT +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALADCEN*NLGFDP
Trigger: AGGATCAAAGCCCAAGTTCCAGTTTTCACAATCTGC...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 72 bp AAGTTAGGAGAGAGACTATATTTCTCTCCATGTGGTTaGGTAATAGATATCTGCCCTTCACAGTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: KLGERLYFSPCG*VIDICPSQCSH
Trigger: GTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAATATAGTCTCTCTCCTAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 72 bp ATCCTAGATGAGCTCATATCCTCTGGCAATCTCACCTaGGACAAGGATGGCATCTTCAGGATTATCTCATTT +
Preference number: 4 (lower is better)
Translates to: ILDELISSGNLT*DKDGIFRIISF
Trigger: AAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATTGCCAGAGGATATGAGCTCATCTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAGGGAGTGTGAGTTGGTaGTTCCAAATTCATCCAAAT +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLGSVSW*FQIHPN
Trigger: ATTTGGATGAATTTGGAATCACCAACTCACACTCCC...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTTTACTTCCCAGGTGCTaGAAATCACAACAAATTGGA +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALLLPRC*KSQQIG
Trigger: TCCAATTTGTTGTGATTTTCAGCACCTGGGAAGTAA...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCGAGATCTTTACTTATTaGGGAGGACATCCACATAAA +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPEIFTY*GGHPHK
Trigger: TTTATGTGGATGTCCTCCTCAATAAGTAAAGATCTC...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATTGTTTCCGTTTTGCTaGATGTTGTTCCTTCGGCTT +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLLFPFC*MLFLRL
Trigger: AAGCCGAAGGAACAACATTCAGCAAAACGGAAACAA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTTTGAAAAGGGACTTTTaGAAGGACGTGAATCATGCA +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALLKRDF*KDVNHA
Trigger: TGCATGATTCACGTCCTTTCAAAAGTCCCTTTTCAA...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTCACTTTACCAAATGTTaGAAAGGGACTTTTGAAAGG +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFHFTKC*KGTFER
Trigger: CCTTTCAAAAGTCCCTTTTCAACATTTGGTAAAGTG...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTTACAGTTTCAATCAATaGAGGGAACAATGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALYSFNQ*REQCGS
Trigger: GCTACCACATTGTTCCCTTCATTGATTGAAACTGTA...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTAGTACTGCCTCTACTTaGGTCATATTATCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALSTAST*VILSVC
Trigger: ACACACTGATAATATGACGCAAGTAGAGGCAGTACT...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTCCTATTCTGTGACATaGGCTATACCAACTGATAAT +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPSYSVT*AIPTDN
Trigger: ATTATCAGTTGGTATAGCGCATGTCACAGAATAGGA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCTGCTCAAATCTTTCTaGTGCTGGGGTGAGCTTATT +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLILLKSF*CWGELI
Trigger: AATAAGCTCACCCCAGCACCAGAAAGATTTGAGCAG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTATCTGCACGAATATATaGCAGTTTGTGCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIICTNI*QFVHCA
Trigger: GGCACAGTGCACAAACTGCCATATATTCGTGCAGAT...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAAGTGACATGGCCACATaGAAATGCGCAGTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLSDMAT*KCAVRK
Trigger: TTTTCTTACTGCGCATTTCCATGTGGCCATGTCACT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCCCCTTGTAGTGACATaGCCACATGGAAATGCGCAG +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSPLVVT*PHGNAQ
Trigger: CTGCGCATTTCCATGTGGCCATGTCACTACAAGGGG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCCGCAGCATTGTTTATTaGCTCATTAGCACTATGAAT +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPRSIVY*LISTMN
Trigger: ATTCATAGTGCTAATGAGCCAATAAACAATGCTGCG...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 72 bp ATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATaGTTAACACTTCTGGTGATTCTAGGTCAGGTGACC +
Preference number: 4 (lower is better)
Translates to: ILISWLKAQKSV*LTLLVILGQVT
Trigger: GGTCACCTGACCTAGAATCACCAGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTAGAGCCAAGGCAGGTTaGAATAATATTGAATGCTTT +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALRAKAG*NNIECF
Trigger: AAAGCATTCAATATTATTTCAACCTGCCTTGGCTCT...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCTAGGAAGCATGCTTTaGGTAAAACTGACAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLILGSML*VKLTES
Trigger: GCTTTCTGTCAGTTTTACTCAAAGCATGCTTCCTAG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAGTAAATGAGAAGACATaGCATGAAACAGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLVNEKT*HETAQD
Trigger: ATCCTGGGCTGTTTCATGGCATGTCTTCTCATTTAC...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGGTGATGGATCAGAACTaGATGGGATTTGTTGTACAG +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELVMDQN*MGFVVQ
Trigger: CTGTACAACAAATCCCATGCAGTTCTGATCCATCAC...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAGACATATTCTCCAAATaGTTGCCCGTAGGTATGGAT +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLDIFSK*LPVGMD
Trigger: ATCCATACCTACGGGCAAGCATTTGGAGAATATGTC...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTGGGGTTTGGACATCTaGAATTTTAAAGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELWGLDI*NFKASP
Trigger: TGGAGAGGCTTTAAAATTGCAGATGTCCAAACCCCA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTTTCCTGAGGTATGCCTaGATTAGTATTACCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIFLRYA*ISITCG
Trigger: TCCACAGGTAATACTAATGCAGGCATACCTCAGGAA...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTATGATTCCTACAAACTaGCTGTTTAATGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFMIPTN*LFNVFR
Trigger: TCTGAAGACATTAAACAGGCAGTTTGTAGGAATCAT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAGACCAGTTGCATTTCTaGAAGCACACATTACTTCCT +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLDQLHF*KHTLLP
Trigger: AGGAAGTAATGTGTGCTTGCAGAAATGCAACTGGTC...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCGGTCCGTTGTGAGATaGCATCCTTGGATGTTGAAC +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSRSVVR*HPWMLN
Trigger: GTTCAACATCCAAGGATGCCATCTCACAACGGACCG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATGGATCAGAACTGCATaGGATTTGTTGTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLWIRTA*DLLYSE
Trigger: TTCACTGTACAACAAATCCCATGCAGTTCTGATCCA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAATGGTAGGTTTATTTaGTTCTATAAAGCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFNGRFI*FYKALN
Trigger: GTTCAGGGCTTTATAGAACCAAATAAACCTACCATT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCGAACATTCTAATTTTTaGGTGGATTATTGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPEHSNF*VDYWPE
Trigger: TTCAGGCCAATAATCCACCCAAAAATTAGAATGTTC...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTCTGATTGCAATACAATaGAATGAAGTTAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALLIAIQ*NEVRRE
Trigger: CTCTCTCCTAACTTCATTCCATTGTATTGCAATCAG...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCACCTGTTAGACTTCTaGGCTCTTCCTCAAACTAAA +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIHLLDF*ALPQTK
Trigger: TTTAGTTTGAGGAAGAGCCCAGAAGTCTAACAGGTG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTATCTCATTACAGTCCCTaGAGACATGTATTCCATCCT +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLSHYSP*RHVFHP
Trigger: AGGATGGAATACATGTCTCCAGGGACTGTAATGAGA...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTGTGAAAACTGGAACTTaGGCTTTGATCCTTAGTTTA +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALVKTGT*ALILSL
Trigger: TAAACTAAGGATCAAAGCCCAAGTTCCAGTTTTCAC...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTGGATTTGTTGTACAGTaGACGGTCCGTTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSGFVVQ*TVRCEM
Trigger: CATCTCACAACGGACCGTTCACTGTACAACAAATCC...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTATGTATAGCTTTTCCGTaGTGTAATCCTTGTGGATTG +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLCIAFP*CNPCGL
Trigger: CAATCCACAAGGATTACATCACGGAAAAGCTATACA...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGCCAGAAAATGATCTCTaGGAATCTTCTTGCTATCCT +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELPENDL*ESSCYP
Trigger: AGGATAGCAAGAAGATTCTCAGAGATCATTTTCTGG...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGGTACACTTGAACAACTaGGATTATTCACGTCAAAGC +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELVHLNN*DYSRQS
Trigger: GCTTTGACGTGAATAATCTCAGTTGTTCAAGTGTAC...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTAGGTATGGATTTCAATaGTTTTGCTTAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALRYGFQ*FCLAHC
Trigger: ACAATGAGCTAAGCAAAAGCATTGAAATCCATACCT...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTATCTGCCCTTCACAGTaGTCGCACTTTATACTCTCC +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSICPSQ*SHFILS
Trigger: GGAGAGTATAAAGTGCGAGCACTGTGAAGGGCAGAT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAATAGAGAACATATCATaGGAAGCACGTAGACAGTTG +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLIENIS*EARRQL
Trigger: CAACTGTCTACGTGCTTCCCATGATATGTTCTCTAT...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGATAGTCTGGATAGCTaGATCTATGCCCTTTTTACT +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIDSLDS*IYALFT
Trigger: AGTAAAAAGGGCATAGATCCAGCTATCCAGACTATC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAATTTTATTGTTAGCCTaGGATTGCCTCAGGTATTTC +
Preference number: 4 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLILLLA*DCLRYF
Trigger: GAAATACCTGAGGCAATCCCAGGCTAACAATAAAAT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGACCCATCTAAACAGGTaGGATGAAAACCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELTHLNR*DENLKT
Trigger: AGTTTTGAGGTTTTCATCCCACCTGTTTAGATGGGT...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
3UTR CAA 72 bp CTTAATTGTAAGCTCATTTTAGGCAGTGATAGTACCTaGTTCATCTTATCTCTGTGGGTGTTAAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LNCKLILGSDST*FILSLWVLRQC
Trigger: GCACTGCCTTAACACCCACAGAGATAAGATGAACAAGGTACTATCACTGCCTAAAATGAGCTTACAATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTAATGATTGCTCATGCTaGGCTTTTAAAAATCTCCAC +
Preference number: 4 (lower is better)
Translates to: VTLAHISHIMSGSPGLLINDCSC*AFKNLH
Trigger: GTGGAGATTTTTAAAAGCTCAGCATGAGCAATCATT...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTTTGGTAATAGATATCTaGCCTTCACAGTGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSLVIDI*PSQCSH
Trigger: GTGCGAGCACTGTGAAGGGCAGATATCTATTACCAA...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCAGACAAGGAGACTTTaGAACCCAAGAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSQTRRL*NPRMWS
Trigger: AGACCACATTCTTGGGTTCCAAAGTCTCCTTGTCTG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAAATTTCTCAGAAATATaGTACCTCTGCTTTACAGCT +
Preference number: 4 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLNFSEI*YLCFTA
Trigger: AGCTGTAAAGCAGAGGTAGCATATTTCTGAGAAATT...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTTTTCTCTGGCATCTTaGCTTTCATGGCTTATTAAA +
Preference number: 4 (lower is better)
Translates to: NLTLDKDGIFRIISFKELFSLAS*LSWLIK
Trigger: TTTAATAAGCCATGAAAGGCAAGATGCCAGAGAAAA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTATAGTTTTCCCTAGATaGTCCCAGAACAACAGGTAC +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSIVFPR*SQNNRY
Trigger: GTACCTGTTGTTCTGGGACCATCTAGGGAAAACTAT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCCCATTTCCTTCTGCTaGACTCAACTCCTAAAATAT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSPISFC*TQLLKY
Trigger: ATATTTTAGGAGTTGAGTTCAGCAGAAGGAAATGGG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR TCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCAATTAAGATGTCAGTaGGCAGTGAGTTCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSQLRCQ*AVSSKV
Trigger: GACTTTTGAACTCACTGCTCACTGACATCTTAATTG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTACAGGAATATTCCTCTaGTCAAATCTTTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSTGIFL*SNLSGA
Trigger: AGCACCAGAAAGATTTGAGCAGAGGAATATTCCTGT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTACTTTGCTAGCTCACTaGGAGAGTTATAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSTLLAH*ESYNLP
Trigger: TGGAAGATTATAACTCTCCCAGTGAGCTAGCAAAGT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCAGGGTGTAATACTCTaGATGTGGACAATTCAGTAT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSQGVIL*MWTIQY
Trigger: ATACTGAATTGTCCACATCCAGAGTATTACACCCTG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTGTTGACTGTCAAGACTaGCTAGATGTTCTATGTTAT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSVDCQD*LDVLCY
Trigger: ATAACATAGAACATCTAGGCAGTCTTGACAGTCAAC...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR GCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTTTAATCAAAATGGAATaGAGCCATGTGTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSLIKME*SHVWKV
Trigger: AACTTTCCACACATGGCTGCATTCCATTTTGATTAA...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CCA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTTTTCTAAAGTATTATTaGGATTACTTCCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSFLKYY*DYFPGA
Trigger: AGCACCTGGGAAGTAATCCCAATAATACTTTAGAAA...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCACTGCATGGGATTTGTaGTACAGTGAACGGTCCGTT +
Preference number: 5 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSTAWDL*YSERSV
Trigger: AACGGACCGTTCACTGTACAACAAATCCCATGCAGT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTATACAGGAGAATCACTaGAACCTGGGAGGCCGAGGT +
Preference number: 5 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFIQENH*NLGGRG
Trigger: ACCTCGGCCTCCCAGGTTCAAGTGATTCTCCTGTAT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCAATCATGCATACGGATaGAGACAGAGCCTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSNHAYG*RQSLCV
Trigger: CACACACAGGCTCTGTCTCAATCCGTATGCATGATT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CCA 90 bp AGGGTTCCAGTTACTCACAACCCAGCACACCAATTTCTCTTTGCTTaGCACTTCAAACACGAAGGGATTTGTGCTTACCGTCAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RVPVTHNPAHQFLFA*HFKHEGICAYRQEA
Trigger: GGCTTCTTGACGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTGCTGGGTTGTGAGTAACTGGAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTCTGGCAATCTCACCTaGGACAAGGATGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPSGNLT*DKDGIF
Trigger: GAAGATGCCATCCTTGTCCAAGGTGAGATTGCCAGA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 90 bp TCATCACTTCAGTTCTTGCCCCATAGGCCCTCAATAAAGAGAGGCTaGATTGCACTCCAAAGAAACTATGTCAGGGGAGCCTTAGAAGTG +
Preference number: 5 (lower is better)
Translates to: SSLQFLPHRPSIKRG*IALQRNYVRGALEV
Trigger: CACTTCTAAGGCTCCCCTGACATAGTTTCTTTGGAGTGCAATTCAGCCTCTCTTTATTGAGGGCCTATGGGGCAAGAACTGAAGTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483933.5
CDS-3UTR CAA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTGGCATCCTTGGATGTaGAACATTGCTTGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPWHPWM*NIAWQD
Trigger: ATCCTGCCAAGCAATGTTCAACATCCAAGGATGCCA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCTGTGAGATGGCATCCTaGGATGTTGAACATTGCTTG +
Preference number: 5 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPCEMAS*DVEHCL
Trigger: CAAGCAATGTTCAACATCCAAGGATGCCATCTCACA...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 90 bp CGTAGGTATGGATTTCAATGCTTTTGCTTAGCTCATTGTAATACTTaGCTCTGGCATGCTCAGGGTTCCAGTTACTCACAACCCAGCACA +
Preference number: 5 (lower is better)
Translates to: RRYGFQCFCLAHCNT*LWHAQGSSYSQPST
Trigger: TGTGCTGGGTTGTGAGTAACTGGAACCCTGAGCATGCCAGAGTCAAGTATTACAATGAGCTAAGCAAAAGCATTGAAATCCATACCTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACAAACACGAAGGGATTaGTGCTTACCGTCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLQTRRD*CLPSRS
Trigger: GCTTCTTGACGGTAAGCACAAATCCCTTCGTGTTTG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTCCAGCCAGAAAAGCATaGTATAGCTTTTCCGTGATG +
Preference number: 5 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALPARKA*YSFSVM
Trigger: CATCACGGAAAAGCTATACAATGCTTTTCTGGCTGG...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp ATACGGATTGAGACAGAGCCTGTGTGTGAGTGGCAGTGTAAATGTCCCCAAAGCACACATATTACCTGTTaGGGATTAAGCCCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: IRIETEPVCEWQCKCPQSTHITC*GLSPFK
Trigger: TTTGAAAGGGCTTAATCCCAAACAGGTAATATGTGT...GCTTTGGGGACATTTACACTGCCACTCACACACAGGCTCTGTCTCAATCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 90 bp AGAGTCAGGTTAAACAAGTGCTCAATGCCACTCTTTTGGGGAGTGTaGGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: RVRLNKCSMPLFWGV*VGDSKFIQIHFWKG
Trigger: ACCCTTCCAGAAATGGATTTGGATGAATTTGGAATCACCAACTCACACTCCCCAAAAGAGTGGCATTGAGCACTTGTTTAACCTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS GCA 90 bp ACACCAATTTCTCTTTGCTTGGCACTTCAAACACGAAGGGATTTGTaGTTACCGTCAAGAAGCCATAAGGCACTTGGATATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: TPISLCLALQTRRDL*LPSRSHKALGYLNH
Trigger: GTGATTCAGATATCCAAGTGCCTTATGGCTTCTTGACGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACCAATTTCTCTTTGCTaGGCACTTCAAACACGAAGG +
Preference number: 5 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLPISLC*ALQTRR
Trigger: CCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCTTCCTTCAGATACTTaGCTAGCTCACTGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLILPSDT*LAHWES
Trigger: ACTCTCCCAGTGAGCTAGCAAAGTATCTGAAGGAAG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAGGTGCTTTCTAAACTaGTTAGCAGTGTATCCTCTT +
Preference number: 5 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFRCFLN*LAVYPL
Trigger: AAGAGGATACACTGCTAACAAGTTTAGAAAGCACCT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTATCAGACAAGGAGACTTaGGAACCCAAGAATGTGGTC +
Preference number: 5 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLSDKET*EPKNVV
Trigger: GACCACATTCTTGGGTTCCAAAGTCTCCTTGTCTGA...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp ATCTTGGTTGGTAAAGTCGGCGTCTACAGTGCTAGGACTGACTACTCCTCATTTAGTGAATGGCAGACCTaGGATTCAATTCTAAATCTG +
Preference number: 5 (lower is better)
Translates to: ILVGKVGVYSARTDYSSFSEWQT*DSILNL
Trigger: CAGATTTAGAATTGAATCCAAGGTCTGCCATTCACT...AAATGAGGAGTAGTCAGTCCTAGCACTGTAGACGCCGACTTTACCAACCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TATTTAGTAATGCAAACAATGCCTATTCACCACCACTGCCAGCTCCTCACACCCAGTAATTTTGACCAGTaGCATTTCTGCAAGCACACA +
Preference number: 5 (lower is better)
Translates to: YLVMQTMPIHHHCQLLTPSNFDQ*HFCKHT
Trigger: TGTGTGCTTGCAGAAATGCAACTGGTCAAAATTACT...GGGTGTGAGGAGCTGGCAGTGGTGGTGAATAGGCATTGTTTGCATTACTAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTATGCCGCTTTGTGAACTaGAATCTAGGTACAGACTTG +
Preference number: 5 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLCRFVN*NLGTDL
Trigger: CAAGTCTGTACCTAGATTCAAGTTCACAAAGCGGCA...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCACACATACACTATCTaGGTTGGTAAAGTCGGCGTC +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIHTYTI*VGKVGV
Trigger: GACGCCGACTTTACCAACCAAGATAGTGTATGTGTG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTCTCCATGTGGTTTGGTAATAGATATCTGCCCTTCACAGTGCTCGCACTTGAAGCACGTAGACAGTaGTTATACTACTTCACTGTA +
Preference number: 5 (lower is better)
Translates to: FLSMWFGNRYLPFTVLALEARRQ*LYYFTV
Trigger: TACAGTGAAGTAGTATAACAACTGTCTACGTGCTTC...AAGTGCGAGCACTGTGAAGGGCAGATATCTATTACCAAACCACATGGAGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTATTTGGGGAGTGTGAGTaGGTGATTCCAAATTCATCC +
Preference number: 5 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLFGECE*VIPNSS
Trigger: GGATGAATTTGGAATCACCAACTCACACTCCCCAAA...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTACACACCAATTTCTCTTaGCTTGGCACTTCAAACACG +
Preference number: 5 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLHTNFS*LGTSNT
Trigger: CGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTG...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGGCAGTGATAGTACCTaGTTCATCTTATCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIGSDST*FILSLW
Trigger: CCACAGAGATAAGATGAACAAGGTACTATCACTGCC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTTTCTCTCCATGTGGTTaGGTAATAGATATCTGCCCT +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIFSPCG*VIDICP
Trigger: AGGGCAGATATCTATTACCAAACCACATGGAGAGAA...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTCCTAGGAAGCATGCTTaGAGTAAAACTGACAGAAAG +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIPRKHA*SKTDRK
Trigger: CTTTCTGTCAGTTTTACTCAAAGCATGCTTCCTAGG...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAGAGAAGTTGAGTAACTaGCACATAGCTAGTGAATGG +
Preference number: 5 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLEKLSN*HIASEW
Trigger: CCATTCACTAGCTATGTGCAAGTTACTCAACTTCTC...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTTTGCCCAATTTAGTGTaGTGCAGACCTGACCTCAGG +
Preference number: 5 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSLPNLV*CRPDLR
Trigger: CCTGAGGTCAGGTCTGCACAACACTAAATTGGGCAA...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAACTGAAGCTGTTAAATaGAACTGGAAGGAACCAATC +
Preference number: 5 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLTEAVK*NWKEPI
Trigger: GATTGGTTCCTTCCAGTTCAATTTAACAGCTTCAGT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTACATCTCCAGTTTAATTaGTGGAAAACACGAGTTCTC +
Preference number: 5 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLHLQFN*WKTRVL
Trigger: GAGAACTCGTGTTTTCCACAAATTAAACTGGAGATG...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 90 bp ATATTCTTGATGCCTTTTCACATGATCGCAAGCCAAACATGCATGTaGTTCCCAAAATCGTGGAAGATTTACAGTGAAATCCTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: IFLMPFHMIASQTCM*FPKSWKIYSEILPP
Trigger: TGGAGGAAGGATTTCACTGTAAATCTTCCACGATTTTGGGAATCACATGCATGTTTGGCTTGCGATCATGTGAAAAGGCATCAAGAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAGGGCGAAGAATTCCTTaGGATGTTGATGTCATAATT +
Preference number: 5 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLGRRIP*DVDVII
Trigger: AATTATGACATCAACATCCAAAGGAATTCTTCGCCC...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTAGAACTGCATGGGATTaGTTGTACAGTGAACGGTCC +
Preference number: 5 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSRTAWD*LYSERS
Trigger: GGACCGTTCACTGTACAACAAATCCCATGCAGTTCT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGTCCAACAAATGTGCATaGAGATCTTACTGTGTGCTA +
Preference number: 5 (lower is better)
Translates to: NLTLDKDGIFRIISFKELSNKCA*RSYCVL
Trigger: TAGCACACAGTAAGATCTCAATGCACATTTGTTGGA...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTGTGAGTTCCACGCTCTaGTGTGAAATAATTAGGTAT +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLIVSSTL*CEIIRY
Trigger: ATACCTAATTATTTCACACAAGAGCGTGGAACTCAC...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp TTTCTTCCCCTAGTGATTACACTGGTTGACTGTCAAGACTGCCTAGATGTTCTAAAAAGAAACGCAGCATaGTTTATTGGCTCATTAGCA +
Preference number: 5 (lower is better)
Translates to: FLPLVITLVDCQDCLDVLKRNAA*FIGSLA
Trigger: TGCTAATGAGCCAATAAACAATGCTGCGTTTCTTTT...TAGAACATCTAGGCAGTCTTGACAGTCAACCAGTGTAATCACTAGGGGAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTATTTTCTAAAGTATTATaGGGATTACTTCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLFSKVL*GLLPRC
Trigger: GCACCTGGGAAGTAATCCCAATAATACTTTAGAAAA...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGAGAACTGTCACTTCCTaGAAACAATCATTTTTCTGG +
Preference number: 5 (lower is better)
Translates to: NLTLDKDGIFRIISFKELRTVTS*KQSFFW
Trigger: CCAGAAAAATGATTGTTTCAAGGAAGTGACAGTTCT...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTGTTGGGTCAAAAGAGTaGACAAAGTTTGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSVGSKE*TKFAAQ
Trigger: CTGAGCTGCAAACTTTGTCAACTCTTTTGACCCAAC...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AATCTCACCTTGGACAAGGATGGCATCTTCAGGATTATCTCATTTAAGGAACTGGTGAAGCATACCCATTaGCAAAATGCTACAAAATCT +
Preference number: 5 (lower is better)
Translates to: NLTLDKDGIFRIISFKELVKHTH*QNATKS
Trigger: AGATTTTGTAGCATTTTGCAAATGGGTATGCTTCAC...CAGTTCCTTAAATGAGATAATCCTGAAGATGCCATCCTTGTCCAAGGTGAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTAATCTAGGTACAGACTaGTTAGCTCCTTACTTTTTC +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLINLGTD*LAPYFF
Trigger: GAAAAAGTAAGGAGCTAACAAGTCTGTACCTAGATT...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTAACTCTGGCCCATATTTCTCACATAATGAGTGGTAGTCCTGGGTTGTTAATTTGCATGATTCACCAATaGCATGCAATTTTTCACCTA +
Preference number: 5 (lower is better)
Translates to: VTLAHISHIMSGSPGLLICMIHQ*HAIFHL
Trigger: TAGGTGAAAAATTGCATGCAATTGGTGAATCATGCA...AATTAACAACCCAGGACTACCACTCATTATGTGAGAAATATGGGCCAGAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp GTGAGCTTATTCTCTCACAAGATAGTCTGGATAGCTGGATCTATGCCCTTTTTAAGATGTTCTATGTTATaGCCCAATTTAGTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: VSLFSHKIVWIAGSMPFLRCSML*PNLVLC
Trigger: GCACAACACTAAATTGGGCAATAACATAGAACATCT...TAAAAAGGGCATAGATCCAGCTATCCAGACTATCTTGTGAGAGAATAAGCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCATACACTATCTTGGTaGGTAAAGTCGGCGTCTACA +
Preference number: 5 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSHTLSW*VKSAST
Trigger: TGTAGACGCCGACTTTACCAACCAAGATAGTGTATG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTATATTCTCCAAATGCTaGCCCGTAGGTATGGATTTC +
Preference number: 5 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSIFSKC*PVGMDF
Trigger: GAAATCCATACCTACGGGCAAGCATTTGGAGAATAT...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS-3UTR CAA 90 bp AGAAATTCTAATTTCATGGCTCAAAGCCCAGAAATCGGTATTGTTAACACTTCTCTTAAAATAACCCTATaGGGTCTGCATCGCAATAAT +
Preference number: 5 (lower is better)
Translates to: RNSNFMAQSPEIGIVNTSLKITL*GLHRNN
Trigger: ATTATTGCGATGCAGACCCAATAGGGTTATTTTAAG...AGAAGTGTTAACAATACCGATTTCTGGGCTTTGAGCCATGAAATTAGAATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 72 bp CAGTTCTTGCCCCATAGGCCCTCAATAAAGAGAGGCTaGATTGCACTCCAAAGAAACTATGTCAGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: QFLPHRPSIKRG*IALQRNYVRGA
Trigger: GGCTCCCCTGACATAGTTTCTTTGGAGTGCAATTCAGCCTCTCTTTATTGAGGGCCTATGGGGCAAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483933.5
CDS CAA 90 bp CAGGGTTCCAGTTACTCACAACCCAGCACACCAATTTCTCTTTGCTaGGCACTTCAAACACGAAGGGATTTGTGCTTACCGTCAAGAAGC +
Preference number: 6 (lower is better)
Translates to: QGSSYSQPSTPISLC*ALQTRRDLCLPSRS
Trigger: GCTTCTTGACGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTGCTGGGTTGTGAGTAACTGGAACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 90 bp TGCTCAGGGTTCCAGTTACTCACAACCCAGCACACCAATTTCTCTTaGCTTGGCACTTCAAACACGAAGGGATTTGTGCTTACCGTCAAG +
Preference number: 6 (lower is better)
Translates to: CSGFQLLTTQHTNFS*LGTSNTKGFVLTVK
Trigger: CTTGACGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTGCTGGGTTGTGAGTAACTGGAACCCTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 90 bp TTGTTGTACAGTGAACGGTCCGTTGTGAGATGGCATCCTTGGATGTaGAACATTGCTTGGCAGGATGTAAGGTCAAAGGTCTGCCCAAAT +
Preference number: 6 (lower is better)
Translates to: LLYSERSVVRWHPWM*NIAWQDVRSKVCPN
Trigger: ATTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAACATCCAAGGATGCCATCTCACAACGGACCGTTCACTGTACAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 72 bp ATCCAAATCCATTTCTGGAAGGGTGGCCTAGCTTGCTaGGGTAAATTTGTCAGATCCCAACTGATGTCTCGG +
Preference number: 6 (lower is better)
Translates to: IQIHFWKGGLAC*GKFVRSQLMSR
Trigger: CCGAGACATCAGTTGGGATCTGACAAATTTACCTCAGCAAGCTAGGCCACCCTTCCAGAAATGGATTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS GCA 72 bp TTGAACATTGCTTGGCAGGATGTAAGGTCAAAGGTCTaGCCAAATGGCCACACCCACACCAGAATAGTAGTT +
Preference number: 6 (lower is better)
Translates to: LNIAWQDVRSKV*PNGHTHTRIVV
Trigger: AACTACTATTCTGGTGTGGGTGTGGCCATTTGGGCAGACCTTTGACCTTACATCCTGCCAAGCAATGTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 72 bp GCTTACCGTCAAGAAGCCATAAGGCACTTGGATATCTaGATCACGGCGGTAAGTCAGAGTCAGGTTAAACAA +
Preference number: 6 (lower is better)
Translates to: AYRQEAIRHLDI*ITAVSQSQVKQ
Trigger: TTGTTTAACCTGACTCTGACTTACCGCCGTGATTCAGATATCCAAGTGCCTTATGGCTTCTTGACGGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CCA 72 bp GTTACTCACAACCCAGCACACCAATTTCTCTTTGCTTaGCACTTCAAACACGAAGGGATTTGTGCTTACCGT +
Preference number: 6 (lower is better)
Translates to: VTHNPAHQFLFA*HFKHEGICAYR
Trigger: ACGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTGCTGGGTTGTGAGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 72 bp AGTTACTCACAACCCAGCACACCAATTTCTCTTTGCTaGGCACTTCAAACACGAAGGGATTTGTGCTTACCG +
Preference number: 6 (lower is better)
Translates to: SYSQPSTPISLC*ALQTRRDLCLP
Trigger: CGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTGCTGGGTTGTGAGTAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 72 bp ATTTCTCTTTGCTTGGCACTTCAAACACGAAGGGATTaGTGCTTACCGTCAAGAAGCCATAAGGCACTTGGA +
Preference number: 6 (lower is better)
Translates to: ISLCLALQTRRD*CLPSRSHKALG
Trigger: TCCAAGTGCCTTATGGCTTCTTGACGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 72 bp TTCCAGTTACTCACAACCCAGCACACCAATTTCTCTTaGCTTGGCACTTCAAACACGAAGGGATTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: FQLLTTQHTNFS*LGTSNTKGFVL
Trigger: AAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTGCTGGGTTGTGAGTAACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 90 bp AGCACACCAATTTCTCTTTGCTTGGCACTTCAAACACGAAGGGATTaGTGCTTACCGTCAAGAAGCCATAAGGCACTTGGATATCTGAAT +
Preference number: 6 (lower is better)
Translates to: STPISLCLALQTRRD*CLPSRSHKALGYLN
Trigger: ATTCAGATATCCAAGTGCCTTATGGCTTCTTGACGGTAAGCACAAATCCCTTCGTGTTTGAAGTGCCAAGCAAAGAGAAATTGGTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CCA 72 bp ATCTGCTGGAATATAATTCTCATAGTTTTCCCTAGATaGTCCCAGAACAACAGGTACAGAGCCAGCCAGAAA +
Preference number: 6 (lower is better)
Translates to: ICWNIILIVFPR*SQNNRYRASQK
Trigger: TTTCTGGCTGGCTCTGTACCTGTTGTTCTGGGACCATCTAGGGAAAACTATGAGAATTATATTCCAGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 72 bp GGATTTCAATGCTTTTGCTTAGCTCATTGTAATACTTaGCTCTGGCATGCTCAGGGTTCCAGTTACTCACAA +
Preference number: 6 (lower is better)
Translates to: GFQCFCLAHCNT*LWHAQGSSYSQ
Trigger: TTGTGAGTAACTGGAACCCTGAGCATGCCAGAGTCAAGTATTACAATGAGCTAAGCAAAAGCATTGAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 90 bp GGTGGGATGATTATTAAGATGGATTGGAGGTGCTTTCCTTTTCTTTaGTCTGCTTTGATACACCAAAATACAGACAAACCACAGCAATGG +
Preference number: 6 (lower is better)
Translates to: GGMIIKMDWRCFPFL*SALIHQNTDKPQQW
Trigger: CCATTGCTGTGGTTTGTCTGTATTTTGGTGTATCAAAGCAGACAAAAGAAAAGGAAAGCACCTCCAATCCATCTTAATAATCATCCCACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483933.5
CDS TCA 72 bp TTAAACAAGTGCTCAATGCCACTCTTTTGGGGAGTGTaGGTTGGTGATTCCAAATTCATCCAAATCCATTTC +
Preference number: 6 (lower is better)
Translates to: LNKCSMPLFWGV*VGDSKFIQIHF
Trigger: GAAATGGATTTGGATGAATTTGGAATCACCAACTCACACTCCCCAAAAGAGTGGCATTGAGCACTTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS TCA 72 bp ATGCCTTTTCACATGATCGCAAGCCAAACATGCATGTaGTTCCCAAAATCGTGGAAGATTTACAGTGAAATC +
Preference number: 6 (lower is better)
Translates to: MPFHMIASQTCM*FPKSWKIYSEI
Trigger: GATTTCACTGTAAATCTTCCACGATTTTGGGAATCACATGCATGTTTGGCTTGCGATCATGTGAAAAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 90 bp TGCTTGTCAAAGTGTGGTTTCCAGAGTAGGAGTTTACTTAAGAGTTaGTTAGAAATCTCCCATCCCAACCCAGATCTATTGAATAAGAAT +
Preference number: 6 (lower is better)
Translates to: CLSKCGFQSRSLLKS*LEISHPNPDLLNKN
Trigger: ATTCTTATTCAATAGATCTGGGTTGGGATGGGAGATTTCTAACAAACTCTTAAGTAAACTCCTACTCTGGAAACCACACTTTGACAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483933.5
CDS CAA 72 bp ATAACTTATTGTTTTTGTCGACTTCCTTCAGATACTTaGCTAGCTCACTGGGAGAGTTATAATCTTCCACAT +
Preference number: 6 (lower is better)
Translates to: ITYCFCRLPSDT*LAHWESYNLPH
Trigger: ATGTGGAAGATTATAACTCTCCCAGTGAGCTAGCAAAGTATCTGAAGGAAGTCGACAAAAACAATAAGTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302103.6
CDS CAA 72 bp ATTATTAAGATGGATTGGAGGTGCTTTCCTTTTCTTTaGTCTGCTTTGATACACCAAAATACAGACAAACCA +
Preference number: 6 (lower is better)
Translates to: IIKMDWRCFPFL*SALIHQNTDKP
Trigger: TGGTTTGTCTGTATTTTGGTGTATCAAAGCAGACAAAAGAAAAGGAAAGCACCTCCAATCCATCTTAATAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483933.5