RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FUT8 (Homo sapiens)

Ensembl gene IDs: ENSG00000033170

Ensembl transcript IDs: ENST00000342677.10, ENST00000358307.6, ENST00000360689.9, ENST00000394586.6, ENST00000549235.6, ENST00000553924.5, ENST00000554610.1, ENST00000554667.1, ENST00000554765.1, ENST00000555559.5, ENST00000556292.1, ENST00000556518.5, ENST00000557164.5, ENST00000557338.5, ENST00000557536.5, ENST00000673929.1, ENST00000674118.1

Found 686 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTATGAGGGCATTGCAGCCCTTGTTAAAGAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATC +
Preference number: 1 (lower is better)
Translates to: GMRALQPLLKRNSTN*SLCQFPAALGAESI
Trigger: GATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCTCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR GCA 90 bp TCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGC +
Preference number: 1 (lower is better)
Translates to: SSHTNDISRFHGNFI*SSGLVSINGNLIVG
Trigger: GCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR TCA 90 bp ACATGGAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTaGGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTG +
Preference number: 1 (lower is better)
Translates to: TWKNLEKIIPRLSPL*VSHWSRFSLGHQVL
Trigger: CAGAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR CCA 90 bp AAGACTCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTaGTCACCAAGTTCTGCACACTATGAGACATATACTTCTGAAACA +
Preference number: 1 (lower is better)
Translates to: KTQSIVSLPLVPLLT*SPSSAHYETYTSET
Trigger: TGTTTCAGAAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR TCA 90 bp TTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTaGCCGTTTCTATCTTCTCTCGAACTTTGTAGGAGGGATATAGGC +
Preference number: 1 (lower is better)
Translates to: FHLSFISQPQDMWGT*PFLSSLELCRRDIG
Trigger: GCCTATATCCCTCCTACAAAGTTCGAGAGAAGATAGAAACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR TCA 90 bp ACTGAAAGGGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTaGGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCC +
Preference number: 1 (lower is better)
Translates to: TERGKVENNLFACYM*VHYCTVHGYEGIAA
Trigger: GGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCCCTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR GCA 90 bp AAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTaGATGGGTATGAGGGCATTGCAGCCCTTGTTAAAGAGGAATTCC +
Preference number: 1 (lower is better)
Translates to: KTTCLHVICEYIIVL*MGMRALQPLLKRNS
Trigger: GGAATTCCTCTTTAACAAGGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR CCA 90 bp TATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATaGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTC +
Preference number: 1 (lower is better)
Translates to: YFVRSEPSSSTVWLK*FELSLVELSLVVYL
Trigger: GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR TCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 2 (lower is better)
Translates to: SVHCESPIGPASHLVTKFYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR GCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR CAA 90 bp AATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: NDISRFHGNFICSSG*VSINGNLIVGILAP
Trigger: GGGGGCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR CAA 90 bp TTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATaGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAG +
Preference number: 2 (lower is better)
Translates to: FGKDNPKTQSIVSLP*VPLLTWSPSSAHYE
Trigger: CTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTTCCAGCCACACCAATaGTATCTCCAGGTTCCATGG +
Preference number: 2 (lower is better)
Translates to: VICEYIIVLCMGMRALQPFQPHQ*YLQVPW
Trigger: CCATGGAACCTGGAGATATCATTGGTGTGGCTGGAA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR-3UTR TCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR GCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: VICEYIIVLCMGMRALQPHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR-3UTR CCA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTGCAGTGTTTGTCTTATaGGGACATACTGAAAGGGGC +
Preference number: 2 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILAVFVL*GHTERG
Trigger: GCCCCTTTCAGTATGTCCCCATAAGACAAACACTGC...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR CCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 2 (lower is better)
Translates to: SVHCESPIGPASHLVTKFSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR TCA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 2 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR TCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 2 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR CAA 90 bp GAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTTT +
Preference number: 2 (lower is better)
Translates to: EPSSSTVWLKWFELS*VELSLVVYLFHLSF
Trigger: AAAGCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 2 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342677.10
3UTR-3UTR CCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTGCAGTGTTTGTCTTATaGGGACATACTGAAAGGGGC +
Preference number: 2 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPAVFVL*GHTERG
Trigger: GCCCCTTTCAGTATGTCCCCATAAGACAAACACTGC...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CCA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCATCTGAATCTGTTGACTaGAGTGAATTCAGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: PNKPEMVLEMEVIASLGASESVD*SEFSGH
Trigger: GTGACCACTGAATTCACTCCAGTCAACAGATTCAGA...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR CCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGAATCCCAAAGATACCTaGTACTCTCAAAAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLNPKDT*YSQKQG
Trigger: GCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATT...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR CCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 2 (lower is better)
Translates to: LKWFELSLVELSLVVYLFYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 2 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR TCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 2 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342677.10
3UTR-3UTR TCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 2 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR TCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 2 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 2 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR TCA 72 bp GCATTGCAGCCCTTGTTAAAGAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCT +
Preference number: 3 (lower is better)
Translates to: ALQPLLKRNSTN*SLCQFPAALGA
Trigger: AGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAGGGCTGCAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCCTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 3 (lower is better)
Translates to: SVHCESPIGPASHLVTKFLILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR CCA 72 bp TCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTaGTCACCAAGTTCTGCACACTATGAGACATATACT +
Preference number: 3 (lower is better)
Translates to: SIVSLPLVPLLT*SPSSAHYETYT
Trigger: AGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR CAA 90 bp CCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACACCAATGATATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAAT +
Preference number: 3 (lower is better)
Translates to: PVDTFRIAIPMISSHTNDICSSG*VSINGN
Trigger: ATTGCCATTTATGCTCACCAACCCCGAACTGCAGAT...ATCATTGGTGTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR TCA 72 bp AATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTaGGTCTCCCATTGGTCCCGCTTCTCACTTGGTCAC +
Preference number: 3 (lower is better)
Translates to: NLEKIIPRLSPL*VSHWSRFSLGH
Trigger: GTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR CAA 90 bp ATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGCATAAATGGCAATTaGATTGTGGGCATTCTGGCC +
Preference number: 3 (lower is better)
Translates to: MISSHTNDISRFHGNFICSINGN*IVGILA
Trigger: GGCCAGAATGCCCACAATCAAATTGCCATTTATGCT...GCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR-3UTR CAA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACT +
Preference number: 3 (lower is better)
Translates to: SILILNLLTGVNSVVTIPSSQLL*VLRVST
Trigger: AGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR GCA 72 bp ACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGCATAAATGGCAATTTG +
Preference number: 3 (lower is better)
Translates to: TNDISRFHGNFI*SSGLVSINGNL
Trigger: CAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR CCA 72 bp AGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATaGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: RSEPSSSTVWLK*FELSLVELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSLVELS*VVYLFH
Trigger: ATGGAAGAGATAAACGACCAAACTCAGTTCGACCAA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTAGGGCATTGCAGCCCTaGTTAAAGAGGAATTCCACC +
Preference number: 3 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPRALQP*LKRNST
Trigger: GGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCT...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGAGGGCATTGCAGCCCTaGTTAAAGAGGAATTCCACC +
Preference number: 3 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRRALQP*LKRNST
Trigger: GGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCT...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR TCA 72 bp AGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTA +
Preference number: 3 (lower is better)
Translates to: RALFIYSLAEMV*TEFGRTEFGRL
Trigger: TAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 3 (lower is better)
Translates to: SILILNLLTGVNSVVTIPGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
3UTR-3UTR CAA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGGAGGAATTCCACCAATaGAAGCCTATGTCAGTTCCC +
Preference number: 3 (lower is better)
Translates to: IQWSQYHHQIRINFLRVREEFHQ*KPMSVP
Trigger: GGGAACTGACATAGGCTTCAATTGGTGGAATTCCTC...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCACTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 3 (lower is better)
Translates to: PNKPEMVLEMEVIASLGALILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
3UTR-3UTR CAA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCAT +
Preference number: 3 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPLVELS*VVYLFH
Trigger: ATGGAAGAGATAAACGACCAAACTCAGTTCGACCAA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR TCA 72 bp GGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTaGGTACATTATTGTACTGTGCATGGGTATGAGGGC +
Preference number: 3 (lower is better)
Translates to: GKVENNLFACYM*VHYCTVHGYEG
Trigger: GCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR CCA 72 bp AAACCAAACGTCCATTCTCATTCTGAATCTGTTGACTaGAGTGAATTCAGTGGTCACAATACCACCATCAAA +
Preference number: 3 (lower is better)
Translates to: KPNVHSHSESVD*SEFSGHNTTIK
Trigger: TTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGACGTTTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR-3UTR CAA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 3 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGGCCCAGACCGCCAGCTaGGCGGGAGGACCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: TNDISRFHGNFICSSGLVAQTAS*AGGPER
Trigger: GCGCTCCGGTCCTCCCGCTCAGCTGGCGGTCTGGGC...CACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342677.10
CDS-3UTR TCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCGCCCAGACCGCCAGCTaGGCGGGAGGACCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTAQTAS*AGGPER
Trigger: GCGCTCCGGTCCTCCCGCTCAGCTGGCGGTCTGGGC...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR TCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCGAGCTGCGCGCCGCGTaGGTGGAGTGCGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTELRAA*VECEPA
Trigger: GGCCGGCTCGCACTCCACTCACGCGGCGCGCAGCTC...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCCAGGGCGCGCGACCCTaGGCAGTGCCGGCCCCATTC +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTQGARP*AVPAPF
Trigger: GAATGGGGCCGGCACTGCTCAGGGTCGCGCGCCCTG...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR TCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCAGCCTTCGGCGCCACTaGCTGAGGCAGAGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFSLRRH*LRQSAR
Trigger: CCTCGCGCTCTGCCTCAGTCAGTGGCGCCGAAGGCT...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR GCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCCGCGACCCTGAGCAGTaGCGGCCCCATTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTRDPEQ*RPHSAG
Trigger: CCCCGCGGAATGGGGCCGGCACTGCTCAGGGTCGCG...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR GCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCAGTGGACCGAAGGGCTaGCCCAGAGCAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFSGPKG*PRAAQT
Trigger: GGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACT...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS-3UTR CCA 90 bp CTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCGCAGCTGCCCCACGATaGGGGAGTGGGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LQFGVGEHKWQFDCGHSGAAAPR*GSGKGG
Trigger: GCCACCCTTCCCACTCCCCCATCGTGGGGCAGCTGC...GCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTTTCGGCGCCACTGACTaGGGCAGAGCGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILFGATD*GRARGG
Trigger: GCCGCCTCGCGCTCTGCCTCAGTCAGTGGCGCCGAA...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR TCA 90 bp ACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGAGCCTTCGGCGCCACTaGCTGAGGCAGAGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: TPMISPGSMGISSAVRGWSLRRH*LRQSAR
Trigger: CCTCGCGCTCTGCCTCAGTCAGTGGCGCCGAAGGCT...CCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR GCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACGCCCTCAGCCGCAGCTaGCCCACGATGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNALSRS*PTMGEW
Trigger: CCACTCCCCCATCGTGGGGCAGCTGCGGCTGAGGGC...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCGCTCCCCGTCGCAGCTaGCAAAGCCACAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQFGVGEHKWQFDCGHSGAPRRS*QSHSPQ
Trigger: CTGAGGGCTGTGGCTTTGGCAGCTGCGACGGGGAGC...GCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGCGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLRDAEQ*TEGLPQ
Trigger: CTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCG...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR CCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCTGCGCGCCGCGTGAGTaGAGTGCGAGCCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTCAPRE*SASRPI
Trigger: GATTGGCCGGCTCGCACTCCACTCACGCGGCGCGCA...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACAGACCGAGAGCGAGCTaGGTCCAGGGCGCGCGACCC +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNRPRAS*VQGARP
Trigger: GGGTCGCGCGCCCTGGACCCAGCTCGCTCTCGGTCT...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR TCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCGCCCAGACCGCCAGCTaGGCGGGAGGACCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFAQTAS*AGGPER
Trigger: GCGCTCCGGTCCTCCCGCTCAGCTGGCGGTCTGGGC...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR TCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCGCGCCGGAGCGGCTCTaGCAACGAGCGCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFAPERL*QRAQAG
Trigger: CCCCGCCTGCGCTCGTTGTCAGAGCCGCTCCGGCGC...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGGCAGCTGCCCCACGATaGGGGAGTGGGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWAAAPR*GSGKGG
Trigger: GCCACCCTTCCCACTCCCCCATCGTGGGGCAGCTGC...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGGCCCAGACCGCCAGCTaGGCGGGAGGACCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRAQTAS*AGGPER
Trigger: GCGCTCCGGTCCTCCCGCTCAGCTGGCGGTCTGGGC...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR TCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTGAGCTGCGCGCCGCGTaGGTGGAGTGCGAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFELRAA*VECEPA
Trigger: GGCCGGCTCGCACTCCACTCACGCGGCGCGCAGCTC...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCGGCGCCACTGACTaGGGCAGAGCGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLFGATD*GRARGG
Trigger: GCCGCCTCGCGCTCTGCCTCAGTCAGTGGCGCCGAA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGTGGACCGAAGGGCTaGCCCAGAGCAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSGPKG*PRAAQT
Trigger: GGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR CCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNRDAEQ*TEGLPQ
Trigger: CTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGCGCGCCGCGTGAGTaGAGTGCGAGCCGGCCAATC +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSCAPRE*SASRPI
Trigger: GATTGGCCGGCTCGCACTCCACTCACGCGGCGCGCA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR GCA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTGAGGCCAATCAGAGCTaGGCGCCGCGTGAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILEANQS*APREWS
Trigger: ACTCCACTCACGCGGCGCGCAGCTCTGATTGGCCTC...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS-3UTR CCA 90 bp AGCCAGCTTCCCAATCCCAAAGATACCTGGTACTCTCAAAAGCAGGGCATGATAGGAAGGGTGGCTGAGTaGAGGATGCTACTCCCGACC +
Preference number: 4 (lower is better)
Translates to: SQLPNPKDTWYSQKQGMIGRVAE*RMLLPT
Trigger: GGTCGGGAGTAGCATCCTCCACTCAGCCACCCTTCC...TATCATGCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATTGGGAAGCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR CCA 90 bp ACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGGGAAGGGTGGCTGAGTaGAGGATGCTACTCCCGACC +
Preference number: 4 (lower is better)
Translates to: TPMISPGSMGISSAVRGWGRVAE*RMLLPT
Trigger: GGTCGGGAGTAGCATCCTCCACTCAGCCACCCTTCC...CCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCCCAGATCCCAAGCCTaGGGCGCTTTACGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNPRSQA*GALRWE
Trigger: CTCCCACCGTAAAGCGCCCCAGGCTTGGGATCTGGG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCGATGGGGAGGGGGCCTaGAGAGGAGGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLDGEGA*RGGNRL
Trigger: CAGCCGGTTCCCTCCTCTCCAGGCCCCCTCCCCATC...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLPIAGP*SIGPSG
Trigger: ACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGG...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGTGGGAAGGGTGGCTaGGTGGAGGATGCTACTCCC +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSGKGG*VEDATP
Trigger: GGGAGTAGCATCCTCCACTCAGCCACCCTTCCCACT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGAGTGGGAAGGGTGGCTaGGTGGAGGATGCTACTCCC +
Preference number: 4 (lower is better)
Translates to: DIFLLECSNTYQASVGGRSGKGG*VEDATP
Trigger: GGGAGTAGCATCCTCCACTCAGCCACCCTTCCCACT...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR GCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTGCCCTCAGCCGCAGCTaGCCCACGATGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPALSRS*PTMGEW
Trigger: CCACTCCCCCATCGTGGGGCAGCTGCGGCTGAGGGC...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGTTCCAGGCTGCAGTaGCACATCGTGCCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLSSRLQ*HIVPVS
Trigger: ACTGACAGGCACGATGTGGCACTGCAGCCTGGAACT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS-3UTR GCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCGAGGCCAATCAGAGCTaGGCGCCGCGTGAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPEANQS*APREWS
Trigger: ACTCCACTCACGCGGCGCGCAGCTCTGATTGGCCTC...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATCGCGGGACGAGGGGTaGCGCCGAGGCCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPSRDEG*RRGQSE
Trigger: CTCTGATTGGCCTCGGCGGCACCCCTCGTCCCGCGA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp ACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TNDISRFHGNFICSSGLVPIAGP*SIGPSG
Trigger: ACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGG...CACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp CCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACACCAATGATAGTGGGAAGGGTGGCTaGGTGGAGGATGCTACTCCC +
Preference number: 4 (lower is better)
Translates to: PVDTFRIAIPMISSHTNDSGKGG*VEDATP
Trigger: GGGAGTAGCATCCTCCACTCAGCCACCCTTCCCACT...ATCATTGGTGTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR TCA 90 bp CTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCGTCATGGATGTCCTCTaGGCAAAAGCAGCAACCCCA +
Preference number: 4 (lower is better)
Translates to: LQFGVGEHKWQFDCGHSGVMDVL*AKAATP
Trigger: TGGGGTTGCTGCTTTTGCTCAGAGGACATCCATGAC...GCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGGTCCTTCACTTCACCTaGCCAGTGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLVLHFT*PVSSGD
Trigger: ATCTCCACTGGACACTGGTCAGGTGAAGTGAAGGAC...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCAGAGGGCCGGAAGATaGGCTTCCCGTTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNQRAGR*ASRSKL
Trigger: GAGTTTGGAACGGGAAGCTCATCTTCCGGCCCTCTG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR GCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTTCCCGCCAATCACCTaGTCCATCTGTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLFPPIT*SICLTE
Trigger: CTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGGCTGAGTGGAGGATaGTACTCCCGACCGAACGGA +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWWLSGG*YSRPNG
Trigger: TCCGTTCGGTCGGGAGTAGCATCCTCCACTCAGCCA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAGCTCCCCGTCGCAGCTaGCAAAGCCACAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPAPRRS*QSHSPQ
Trigger: CTGAGGGCTGTGGCTTTGGCAGCTGCGACGGGGAGC...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCGAGGAGGGAACCGGCTaGTCGGGTCGGCCGGAGATA +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFEEGTG*SGRPEI
Trigger: TATCTCCGGCCGACCCGAGCAGCCGGTTCCCTCCTC...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR CCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPRDAEQ*TEGLPQ
Trigger: CTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCG...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCACGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPRDAEQ*TEGLPQ
Trigger: CTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCG...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR CCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGCTGACCAGTGTCCAGTaGAGATGCCAGATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLLTSVQ*RCQICL
Trigger: CAGACAGATCTGGCATCTCCACTGGACACTGGTCAG...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATGTCATGGATGTCCTCTaGGCAAAAGCAGCAACCCGC +
Preference number: 4 (lower is better)
Translates to: RFHGNFICSSGLVSINGNVMDVL*AKAATR
Trigger: GCGGGTTGCTGCTTTTGCTCAGAGGACATCCATGAC...ATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342677.10
CDS-3UTR TCA 90 bp GCCATCCCAATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: AIPMISSHTNDISRFHGNYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...ATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCATTGGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCAGCTTCCCAATCCCAAAGATACCTGGTACTCTCAAAAGCAGGGCATGATAGTCCTTCACTTCACCTaGCCAGTGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: SQLPNPKDTWYSQKQGMIVLHFT*PVSSGD
Trigger: ATCTCCACTGGACACTGGTCAGGTGAAGTGAAGGAC...TATCATGCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATTGGGAAGCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTATGGAGGACGGGGATaGAGACTGTCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLYGGRG*RLSTMG
Trigger: TCCCATTGTAGACAGTCTTCATCCCCGTCCTCCATA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGAGCCGGGCAGTCGCTaGCAGCGCGAGACCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYEPGSR*QRETES
Trigger: GCTCTCGGTCTCGCGCTGTCAGCGACTGCCCGGCTC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS-3UTR GCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGAGTGGACCGAAGGGCTaGCCCAGAGCAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRSGPKG*PRAAQT
Trigger: GGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACT...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR GCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCTTCCCGCCAATCACCTaGTCCATCTGTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTFPPIT*SICLTE
Trigger: CTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAA...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTCGCTGGGTGCCATATaGAATCATGAAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFSLGAI*NHEAVD
Trigger: GTCTACTGCTTCATGATTGCATATGGCACCCAGCGA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGCTGAGTGGAGGATaGTACTCCCGACCGAACGGA +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSWLSGG*YSRPNG
Trigger: TCCGTTCGGTCGGGAGTAGCATCCTCCACTCAGCCA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGCCCTCAGCCGCAGCTaGCCCACGATGGGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYALSRS*PTMGEW
Trigger: CCACTCCCCCATCGTGGGGCAGCTGCGGCTGAGGGC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTCGTACAAGTCGATCTaGGAGGTCTTCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLSYKSI*EVFWYS
Trigger: GCTGTACCAGAAGACCTCGCAGATCGACTTGTACGA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGACTGCAGGGTCACCATaGACTCGTACAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLTAGSP*TRTSRS
Trigger: AGATCGACTTGTACGAGTGCATGGTGACCCTGCAGT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTAGACACCCACCACACTaGAGGGTCACCATGCACTCG +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSRHPPH*RVTMHS
Trigger: CGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTAGACACCCACCACACTaGAGGGTCACCATGCACTCG +
Preference number: 4 (lower is better)
Translates to: VVYLFHLSFISQPQDMWGRHPPH*RVTMHS
Trigger: CGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCT...ACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR GCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTCGCGGGACGAGGGGTaGCGCCGAGGCCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMSRDEG*RRGQSE
Trigger: CTCTGATTGGCCTCGGCGGCACCCCTCGTCCCGCGA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTTCAACTCACTTCCCTaGAGTCCTGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFFNSLP*SPGAQR
Trigger: TCTTTGAGCTCCAGGACTCCAGGGAAGTGAGTTGAA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGATCAATAGGGCCTTCTaGTATCCGGAGAGATTCGGC +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLINRAF*YPERFG
Trigger: GCCGAATCTCTCCGGATACCAGAAGGCCCTATTGAT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCAGATCCCAAGCCTaGGGCGCTTTACGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQPRSQA*GALRWE
Trigger: CTCCCACCGTAAAGCGCCCCAGGCTTGGGATCTGGG...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
3UTR CAA 72 bp GGCATTGCAGCCCTTGTTAAAGAGGAATTCCACCAATaGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GIAALVKEEFHQ*KPMSVPSCSWC
Trigger: GCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAGGGCTGCAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR CAA 72 bp GATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATaGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: DNPKTQSIVSLP*VPLLTWSPSSA
Trigger: TGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPPIAGP*SIGPSG
Trigger: ACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGG...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACGTCCTTCACTTCACCTaGCCAGTGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNVLHFT*PVSSGD
Trigger: ATCTCCACTGGACACTGGTCAGGTGAAGTGAAGGAC...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTGTCCTTCACTTCACCTaGCCAGTGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: LPSELYFSASGYVGYLTVVLHFT*PVSSGD
Trigger: ATCTCCACTGGACACTGGTCAGGTGAAGTGAAGGAC...AACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR GCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTCCCGGCGCCCGCGATaGAGAGCAGTGGACCGAAGG +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYSRRPR*RAVDRR
Trigger: CCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR GCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCGCTTTTTGGCTTTGCTaGAGTCCTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFAFWLC*SPWDSE
Trigger: TTCAGAATCCCAAGGACTGCAGCAAAGCCAAAAAGC...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp GCCATCCCAATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: AIPMISSHTNDISRFHGNHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...ATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCATTGGGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR GCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCACTGCAGGGTCACCATaGACTCGTACAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTTAGSP*TRTSRS
Trigger: AGATCGACTTGTACGAGTGCATGGTGACCCTGCAGT...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCAGACACCCACCACACTaGAGGGTCACCATGCACTCG +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSRHPPH*RVTMHS
Trigger: CGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCT...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGCCAGGAACCAGTCCATaGCCGCATTTTCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLPGTSP*PHFQIF
Trigger: GAAAATCTGAAAATGCGGCCATGGACTGGTTCCTGG...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGCTGACCAGTGTCCAGTaGAGATGCCAGATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DIFLLECSNTYQASVGGRLTSVQ*RCQICL
Trigger: CAGACAGATCTGGCATCTCCACTGGACACTGGTCAG...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGCAGCTGCCCCACGATaGGGGAGTGGGAAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWAAAPR*GSGKGG
Trigger: GCCACCCTTCCCACTCCCCCATCGTGGGGCAGCTGC...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTACTCTTCAATGGGATaGAAGGCAGCTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLYSSMG*KAASVP
Trigger: GGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCCCATGTACTCTTCAATaGGATGGAAGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LQFGVGEHKWQFDCGHSGPCTLQ*DGRQLL
Trigger: CAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGG...GCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGGTCCCGCTTCTCACTTaGTCACCAAGTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWVPLLT*SPSSAH
Trigger: GTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGAC...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp CCGTTTCTATCTTCTCTCGAACTTTGTAGGAGGGATATAGGCCCGTCCTTCCCACTGGTAGTCCTGCAGTaGATCTTTCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: PFLSSLELCRRDIGPSFPLVVLQ*IFQRDP
Trigger: AGGATCTCTTTGAAAGATTCACTGCAGGACTACCAG...TGGGAAGGACGGGCCTATATCCCTCCTACAAAGTTCGAGAGAAGATAGAAACGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLPIAGP*SIGPSG
Trigger: ACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGG...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GGTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTCTGAGATTCCAAGATaGGTGTTCGCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GRLSLPSELYFSASGYVGSEIPR*VFAGCH
Trigger: ATGGCACCCAGCGAACACTCATCTTGGAATCTCAGA...CCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACTCTGAGATTCCAAGATaGGTGTTCGCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNSEIPR*VFAGCH
Trigger: ATGGCACCCAGCGAACACTCATCTTGGAATCTCAGA...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTCTGAGATTCCAAGATaGGTGTTCGCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSEIPR*VFAGCH
Trigger: ATGGCACCCAGCGAACACTCATCTTGGAATCTCAGA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCATAATTGGGGTACCTaGCCAGTGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNHNWGT*PVSSGD
Trigger: ATCTCCACTGGACACTGGTCAGGTACCCCAATTATG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342677.10
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGATTGTGCAGTCCAGCTaGCCAGGAAATAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLIVQSS*PGNRVI
Trigger: GATAACTCTATTTCCTGGTCAGCTGGACTGCACAAT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR TCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTTCCAGCCACACCAATaGTATCTCCAGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWFQPHQ*YLQVPW
Trigger: CCATGGAACCTGGAGATATCATTGGTGTGGCTGGAA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCGTCCTTCACTTCACCTaGCCAGTGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPVLHFT*PVSSGD
Trigger: ATCTCCACTGGACACTGGTCAGGTGAAGTGAAGGAC...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACTATGGAGGACGGGGATaGAGACTGTCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNYGGRG*RLSTMG
Trigger: TCCCATTGTAGACAGTCTTCATCCCCGTCCTCCATA...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTATGGAGGACGGGGATaGAGACTGTCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWYGGRG*RLSTMG
Trigger: TCCCATTGTAGACAGTCTTCATCCCCGTCCTCCATA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCCATTTGGTGAAGATATaGAGGCCAGGACTAATAGCT +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFHLVKI*RPGLIA
Trigger: AGCTATTAGTCCTGGCCTTCATATCTTCACCAAATG...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACAGTGGACCGAAGGGCTaGCCCAGAGCAGCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYSGPKG*PRAAQT
Trigger: GGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACT...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
CDS-3UTR GCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCCCAGCTTTTTGGCTTTaGTGCAGTCCTTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTPAFWL*CSPWDS
Trigger: AGAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGG...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGCCAGCTTCCCAATCCCAAAGATACCTGGTACTCTCAAAAGCAGGGCATGATACCAGCTTTTTGGCTTTaGTGCAGTCCTTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: SQLPNPKDTWYSQKQGMIPAFWL*CSPWDS
Trigger: AGAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGG...TATCATGCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATTGGGAAGCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGTGTCCAGTGGAGATaGCAGATCTGTCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSVQWR*QICLCM
Trigger: CATGCACAGACAGATCTGGCATCTCCACTGGACACT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GCCATCCCAATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTCTGTGTATCGATTGTaGAGTCCAGCTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: AIPMISSHTNDISRFHGNSVYRL*SPADQE
Trigger: TTCCTGGTCAGCTGGACTGCACAATCGATACACAGA...ATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCATTGGGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342677.10
CDS-3UTR GCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCTCTGTGTATCGATTGTaGAGTCCAGCTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTSVYRL*SPADQE
Trigger: TTCCTGGTCAGCTGGACTGCACAATCGATACACAGA...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR GCA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: DIFLLECSNTYQASVGGRHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGCTCCCCGTCGCAGCTaGCAAAGCCACAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYAPRRS*QSHSPQ
Trigger: CTGAGGGCTGTGGCTTTGGCAGCTGCGACGGGGAGC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACACTGCAGGGTCACCATaGACTCGTACAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNTAGSP*TRTSRS
Trigger: AGATCGACTTGTACGAGTGCATGGTGACCCTGCAGT...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTACTGCAGGGTCACCATaGACTCGTACAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: LPSELYFSASGYVGYLTVTAGSP*TRTSRS
Trigger: AGATCGACTTGTACGAGTGCATGGTGACCCTGCAGT...AACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR GCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGTCCACTTGCATTCTaGGTGCAAGAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFCPLAF*VQEAEN
Trigger: ATTTTCAGCTTCTTGCACGCAGAATGCAAGTGGACA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp CTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCAGACCATTAGGGTCATaGATGTCCTCTGAGCAAAAG +
Preference number: 4 (lower is better)
Translates to: LQFGVGEHKWQFDCGHSGRPLGS*MSSEQK
Trigger: CTTTTGCTCAGAGGACATCCATGACCCTAATGGTCT...GCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp ACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGCCAGGAACCAGTCCATaGCCGCATTTTCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: TNDISRFHGNFICSSGLVPGTSP*PHFQIF
Trigger: GAAAATCTGAAAATGCGGCCATGGACTGGTTCCTGG...CACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGATCAATAGGGCCTTCTaGTATCCGGAGAGATTCGGC +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWINRAF*YPERFG
Trigger: GCCGAATCTCTCCGGATACCAGAAGGCCCTATTGAT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTTACTCTTCCTATAGCTaGCCCCTGATCAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSELYFSASGYVGYLTVYSSYS*PLINRA
Trigger: GGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTA...AACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCTACACACCAGCTTTTTaGCTTTGCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTYTPAF*LCCSPW
Trigger: CCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTA...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGCCAGCTTCCCAATCCCAAAGATACCTGGTACTCTCAAAAGCAGGGCATGATATACACACCAGCTTTTTaGCTTTGCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SQLPNPKDTWYSQKQGMIYTPAF*LCCSPW
Trigger: CCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTA...TATCATGCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATTGGGAAGCTGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTCTGACCAGTGTCCAGTaGAGATGCCAGATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSLTSVQ*RCQICL
Trigger: CAGACAGATCTGGCATCTCCACTGGACACTGGTCAG...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCGCAGTGTTTGTCTTATaGGGACATACTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTAVFVL*GHTERG
Trigger: GCCCCTTTCAGTATGTCCCCATAAGACAAACACTGC...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTGGAAGGGTGGCTGAGTaGAGGATGCTACTCCCGACC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFGRVAE*RMLLPT
Trigger: GGTCGGGAGTAGCATCCTCCACTCAGCCACCCTTCC...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTGGGGCGCTTTACGGTaGGAGAGCGAAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFWGALR*ESEMVP
Trigger: GGGCACCATTTCGCTCTCCCACCGTAAAGCGCCCCA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp AGCCAGCTTCCCAATCCCAAAGATACCTGGTACTCTCAAAAGCAGGGCATGATAAGTTCTCGGCTAGAGTaGTCAGGATGGTCATTATCT +
Preference number: 4 (lower is better)
Translates to: SQLPNPKDTWYSQKQGMISSRLE*SGWSLS
Trigger: AGATAATGACCATCCTGATCACTCTAGCCGAGAACT...TATCATGCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATTGGGAAGCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GCCATCCCAATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATAGTTCTCGGCTAGAGTaGTCAGGATGGTCATTATCT +
Preference number: 4 (lower is better)
Translates to: AIPMISSHTNDISRFHGNSSRLE*SGWSLS
Trigger: AGATAATGACCATCCTGATCACTCTAGCCGAGAACT...ATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCATTGGGATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPPIAGP*SIGPSG
Trigger: ACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGG...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLSHSLC*YYTPAF
Trigger: AAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTTCCAGCCACACCAATaGTATCTCCAGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSFQPHQ*YLQVPW
Trigger: CCATGGAACCTGGAGATATCATTGGTGTGGCTGGAA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: LQFGVGEHKWQFDCGHSGLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...GCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCGTCATGGATGTCCTCTaGGCAAAAGCAGCAACCCCA +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLVMDVL*AKAATP
Trigger: TGGGGTTGCTGCTTTTGCTCAGAGGACATCCATGAC...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCGTCCTTCACTTCACCTaGCCAGTGTCCAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSVLHFT*PVSSGD
Trigger: ATCTCCACTGGACACTGGTCAGGTGAAGTGAAGGAC...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCTATGGAGGACGGGGATaGAGACTGTCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: MISSHTNDISRFHGNFICYGGRG*RLSTMG
Trigger: TCCCATTGTAGACAGTCTTCATCCCCGTCCTCCATA...GCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCGGCGGATCAAGTATTTaGCAAACTGAGACACCCACC +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPGGSSI*QTETPT
Trigger: GGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCC...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCCAATTTCCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACGGCGGATCAAGTATTTaGCAAACTGAGACACCCACC +
Preference number: 4 (lower is better)
Translates to: SQFPVDTFRIAIPMISSHGGSSI*QTETPT
Trigger: GGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCC...GTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGGAAATTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGGGCTTTCCTAGACCTTaGGACTCGTATTTATTGTCA +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLGFPRP*DSYLLS
Trigger: TGACAATAAATACGAGTCTCAAGGTCTAGGAAAGCC...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGGGCCGGAAGATaGGCTTCCCGTTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPQRAGR*ASRSKL
Trigger: GAGTTTGGAACGGGAAGCTCATCTTCCGGCCCTCTG...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGAGACTCAGTCCATTGTaGGTCTCCCATTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQRLSPL*VSHWSR
Trigger: GCGGGACCAATGGGAGACTCACAATGGACTGAGTCT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGAGACTCAGTCCATTGTaGGTCTCCCATTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLRLSPL*VSHWSR
Trigger: GCGGGACCAATGGGAGACTCACAATGGACTGAGTCT...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp TTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGTTCCCGCCAATCACCTaGTCCATCTGTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: LSLPSELYFSASGYVGYLFPPIT*SICLTE
Trigger: CTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAA...CAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR GCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCCAGCTTTTTGGCTTTaGTGCAGTCCTTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNPAFWL*CSPWDS
Trigger: AGAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACACCAATGATAGTGTCCAGTGGAGATaGCAGATCTGTCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: PVDTFRIAIPMISSHTNDSVQWR*QICLCM
Trigger: CATGCACAGACAGATCTGGCATCTCCACTGGACACT...ATCATTGGTGTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR GCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TCCCAATTTCCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SQFPVDTFRIAIPMISSHHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...GTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGGAAATTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGTGGCTGAGTGGAGGATaGTACTCCCGACCGAACGGA +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRWLSGG*YSRPNG
Trigger: TCCGTTCGGTCGGGAGTAGCATCCTCCACTCAGCCA...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358307.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTCAACTCACTTCCCTaGAGTCCTGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RFHGNFICSSGLVSINGNFNSLP*SPGAQR
Trigger: TCTTTGAGCTCCAGGACTCCAGGGAAGTGAGTTGAA...ATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTTCAACTCACTTCCCTaGAGTCCTGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWFNSLP*SPGAQR
Trigger: TCTTTGAGCTCCAGGACTCCAGGGAAGTGAGTTGAA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTATCAATAGGGCCTTCTaGTATCCGGAGAGATTCGGC +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSINRAF*YPERFG
Trigger: GCCGAATCTCTCCGGATACCAGAAGGCCCTATTGAT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTTACACACCAGCTTTTTaGCTTTGCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILYTPAF*LCCSPW
Trigger: CCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTA...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp ACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGAAGATGAGTGTTCGCTaGGTGCCATATGCAATCATG +
Preference number: 4 (lower is better)
Translates to: TPMISPGSMGISSAVRGWKMSVR*VPYAIM
Trigger: CATGATTGCATATGGCACCCAGCGAACACTCATCTT...CCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTACTCTTCAATGGGATaGAAGGCAGCTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWYSSMG*KAASVP
Trigger: GGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCGTCCCGCTTCTCACTTaGTCACCAAGTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSVPLLT*SPSSAH
Trigger: GTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGAC...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGATGCGCTCTACATGCTaGATTTGTCCAGTTAATCAA +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLMRSTC*ICPVNQ
Trigger: TTGATTAACTGGACAAATTCAGCATGTAGAGCGCAT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFPIAGP*SIGPSG
Trigger: ACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGG...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTCTCCATCTGTCTGACTaGGGTAGTATAGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLLHLSD*GSIDPS
Trigger: TGACGGATCTATACTACCTCAGTCAGACAGATGGAG...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCCTCCATCTGTCTGACTaGGGTAGTATAGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: MISSHTNDISRFHGNFICLHLSD*GSIDPS
Trigger: TGACGGATCTATACTACCTCAGTCAGACAGATGGAG...GCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCAGCTTCCCAATCCCAAAGATACCTGGTACTCTCAAAAGCAGGGCATGATATATGTTATTCTCCGCTaGACCAGTTCTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: SQLPNPKDTWYSQKQGMIYVILR*TSSVRS
Trigger: AGATCTGACAGAACTGGTTCAGCGGAGAATAACATA...TATCATGCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATTGGGAAGCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTSHSLC*YYTPAF
Trigger: AAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCT...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTCTGAGATTCCAAGATaGGTGTTCGCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSSEIPR*VFAGCH
Trigger: ATGGCACCCAGCGAACACTCATCTTGGAATCTCAGA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTCTGAGATTCCAAGATaGGTGTTCGCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLSEIPR*VFAGCH
Trigger: ATGGCACCCAGCGAACACTCATCTTGGAATCTCAGA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACATTGTGCAGTCCAGCTaGCCAGGAAATAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNIVQSS*PGNRVI
Trigger: GATAACTCTATTTCCTGGTCAGCTGGACTGCACAAT...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGGATCACTCCACGAAGTaGATTTTCTGTGTATCGATT +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLDHSTK*IFCVSI
Trigger: AATCGATACACAGAAAATTCACTTCGTGGAGTGATC...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LPSELYFSASGYVGYLTVRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...AACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: DIFLLECSNTYQASVGGRRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp AGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATGGAAGCTCGACCACTTaGACATTTTTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: RFHGNFICSSGLVSINGNGSSTT*TFLSFT
Trigger: AGTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCC...ATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR TCA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCATATGGAGGACGGGGATaGAGACTGTCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: PNKPEMVLEMEVIASLGAYGGRG*RLSTMG
Trigger: TCCCATTGTAGACAGTCTTCATCCCCGTCCTCCATA...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTATGGAGGACGGGGATaGAGACTGTCTACAATGGGA +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSYGGRG*RLSTMG
Trigger: TCCCATTGTAGACAGTCTTCATCCCCGTCCTCCATA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCACAAAAAGCACTCTATaGAGTGCTGTACTTTACAGT +
Preference number: 4 (lower is better)
Translates to: SVHCESPIGPASHLVTKFTKSTL*SAVLYS
Trigger: ACTGTAAAGTACAGCACTTCATAGAGTGCTTTTTGT...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS-3UTR GCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCATTCCCGCCAATCACCTaGTCCATCTGTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPFPPIT*SICLTE
Trigger: CTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAA...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACGCTTTTTGGCTTTGCTaGAGTCCTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNAFWLC*SPWDSE
Trigger: TTCAGAATCCCAAGGACTGCAGCAAAGCCAAAAAGC...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTCGCTGGGTGCCATATaGAATCATGAAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPSLGAI*NHEAVD
Trigger: GTCTACTGCTTCATGATTGCATATGGCACCCAGCGA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTCTGTGTATCGATTGTaGAGTCCAGCTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSSVYRL*SPADQE
Trigger: TTCCTGGTCAGCTGGACTGCACAATCGATACACAGA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR GCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTCTGTGTATCGATTGTaGAGTCCAGCTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPSVYRL*SPADQE
Trigger: TTCCTGGTCAGCTGGACTGCACAATCGATACACAGA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR GCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCACTGCAGGGTCACCATaGACTCGTACAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLTAGSP*TRTSRS
Trigger: AGATCGACTTGTACGAGTGCATGGTGACCCTGCAGT...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGACACCCACCACACTaGAGGGTCACCATGCACTCG +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMRHPPH*RVTMHS
Trigger: CGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCT...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCCACTTGCATTCTGCGTaGAAGAAGCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTHLHSA*KKLKMF
Trigger: GAACATTTTCAGCTTCTTGCACGCAGAATGCAAGTG...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATTGTCCTGTACTTCATaGGCTCTACATGCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPLSCTS*ALHAAR
Trigger: CCGAGCGGCATGTAGAGCGCATGAAGTACAGGACAA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394586.6
CDS-3UTR CCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTTCAACTCACTTCCCTaGAGTCCTGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPFNSLP*SPGAQR
Trigger: TCTTTGAGCTCCAGGACTCCAGGGAAGTGAGTTGAA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTCCAGGAACCAGTCCATaGCCGCATTTTCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSPGTSP*PHFQIF
Trigger: GAAAATCTGAAAATGCGGCCATGGACTGGTTCCTGG...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTACTCTTCCTATAGCTaGCCCCTGATCAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLYSSYS*PLINRA
Trigger: GGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTACTCTTCCTATAGCTaGCCCCTGATCAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSYSSYS*PLINRA
Trigger: GGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTACACACCAGCTTTTTaGCTTTGCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSYTPAF*LCCSPW
Trigger: CCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTACACACCAGCTTTTTaGCTTTGCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPYTPAF*LCCSPW
Trigger: CCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGAAGATGAGTGTTCGCTaGGTGCCATATGCAATCATG +
Preference number: 4 (lower is better)
Translates to: GRLSLPSELYFSASGYVGKMSVR*VPYAIM
Trigger: CATGATTGCATATGGCACCCAGCGAACACTCATCTT...CCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACTGACCAGTGTCCAGTaGAGATGCCAGATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPLTSVQ*RCQICL
Trigger: CAGACAGATCTGGCATCTCCACTGGACACTGGTCAG...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: RFHGNFICSSGLVSINGNATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...ATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp ACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TPMISPGSMGISSAVRGWYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...CCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp GTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTGCAGTGTTTGTCTTATaGGGACATACTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: VVYLFHLSFISQPQDMWGAVFVL*GHTERG
Trigger: GCCCCTTTCAGTATGTCCCCATAAGACAAACACTGC...ACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACGAAGACTGTCTACAATaGGAAGCTCGACCACTTGAA +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNEDCLQ*EARPLE
Trigger: TTCAAGTGGTCGAGCTTCCCATTGTAGACAGTCTTC...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGGAAGACTGTCTACAATaGGAAGCTCGACCACTTGAA +
Preference number: 4 (lower is better)
Translates to: GRLSLPSELYFSASGYVGEDCLQ*EARPLE
Trigger: TTCAAGTGGTCGAGCTTCCCATTGTAGACAGTCTTC...CCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTCTGTGCGTCTGACATaGACTCCAATAACTGGATGT +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSVRLT*TPITGC
Trigger: ACATCCAGTTATTGGAGTCCATGTCAGACGCACAGA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTACTCTTCAATGGGATaGAAGGCAGCTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSYSSMG*KAASVP
Trigger: GGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACACCAATGATTACTCTTCAATGGGATaGAAGGCAGCTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: PVDTFRIAIPMISSHTNDYSSMG*KAASVP
Trigger: GGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTA...ATCATTGGTGTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTGGGGCGCTTTACGGTaGGAGAGCGAAATGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWWGALR*ESEMVP
Trigger: GGGCACCATTTCGCTCTCCCACCGTAAAGCGCCCCA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp TCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTTCTATCCTGGTAGTCCTGCAGTaGATCTTTCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: SELYFSASGYVGYLTVSILVVLQ*IFQRDP
Trigger: AGGATCTCTTTGAAAGATTCACTGCAGGACTACCAG...GATAGAAACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp GAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGAGTTCTCGGCTAGAGTaGTCAGGATGGTCATTATCT +
Preference number: 4 (lower is better)
Translates to: EFHLQFGVGEHKWQFDCGSSRLE*SGWSLS
Trigger: AGATAATGACCATCCTGATCACTCTAGCCGAGAACT...CCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCCTCCATCTGTCTGACTaGGGTAGTATAGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLLHLSD*GSIDPS
Trigger: TGACGGATCTATACTACCTCAGTCAGACAGATGGAG...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCCTCCATCTGTCTGACTaGGGTAGTATAGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSLHLSD*GSIDPS
Trigger: TGACGGATCTATACTACCTCAGTCAGACAGATGGAG...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTATGTTATTCTCCGCTaGACCAGTTCTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWYVILR*TSSVRS
Trigger: AGATCTGACAGAACTGGTTCAGCGGAGAATAACATA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTTATGTTATTCTCCGCTaGACCAGTTCTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILYVILR*TSSVRS
Trigger: AGATCTGACAGAACTGGTTCAGCGGAGAATAACATA...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSHSLC*YYTPAF
Trigger: AAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTATTGTGCAGTCCAGCTaGCCAGGAAATAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSIVQSS*PGNRVI
Trigger: GATAACTCTATTTCCTGGTCAGCTGGACTGCACAAT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCATTGTGCAGTCCAGCTaGCCAGGAAATAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPIVQSS*PGNRVI
Trigger: GATAACTCTATTTCCTGGTCAGCTGGACTGCACAAT...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR TCA 90 bp GGTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 4 (lower is better)
Translates to: GRLSLPSELYFSASGYVGTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...CCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATTCCAGCCACACCAATaGTATCTCCAGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPFQPHQ*YLQVPW
Trigger: CCATGGAACCTGGAGATATCATTGGTGTGGCTGGAA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCATTCCAGCCACACCAATaGTATCTCCAGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPFQPHQ*YLQVPW
Trigger: CCATGGAACCTGGAGATATCATTGGTGTGGCTGGAA...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTGATATGTGGGGTACTTaGCCGTTTCTATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSDMWGT*PFLSSL
Trigger: GAGAGAAGATAGAAACGGTCAAGTACCCCACATATC...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTGATATGTGGGGTACTTaGCCGTTTCTATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VVYLFHLSFISQPQDMWGDMWGT*PFLSSL
Trigger: GAGAGAAGATAGAAACGGTCAAGTACCCCACATATC...ACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp GGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GNFICSSGLVSINGNLIVRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...CACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTGGAAGCTCGACCACTTaGACATTTTTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSGSSTT*TFLSFT
Trigger: AGTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCC...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTGGAAGCTCGACCACTTaGACATTTTTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLGSSTT*TFLSFT
Trigger: AGTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCC...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTAAGTATTTGACAAACTaGGACACCCACCACACTGCA +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLKYLTN*DTHHTA
Trigger: TGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTT...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAGGCGGATCAAGTATTTaGCAAACTGAGACACCCACC +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPGGSSI*QTETPT
Trigger: GGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCC...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGGGCGGATCAAGTATTTaGCAAACTGAGACACCCACC +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLGGSSI*QTETPT
Trigger: GGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCC...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGCACTGTATAATACTTTaGGATACCCAAGTACAAAGC +
Preference number: 4 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLHCIIL*DTQVQS
Trigger: GCTTTGTACTTGGGTATCTCAAAGTATTATACAGTG...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS-3UTR GCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACTTGGCCTTAACAAGCTaGTCTTCTAAAACGCGTACT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNLALTS*SSKTRT
Trigger: AGTACGCGTTTTAGAAGAGCAGCTTGTTAAGGCCAA...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGTTGGCCTTAACAAGCTaGTCTTCTAAAACGCGTACT +
Preference number: 4 (lower is better)
Translates to: DIFLLECSNTYQASVGGRLALTS*SSKTRT
Trigger: AGTACGCGTTTTAGAAGAGCAGCTTGTTAAGGCCAA...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTTTCCCGCCAATCACCTaGTCCATCTGTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPFPPIT*SICLTE
Trigger: CTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAA...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTGCTTTTTGGCTTTGCTaGAGTCCTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VVYLFHLSFISQPQDMWGAFWLC*SPWDSE
Trigger: TTCAGAATCCCAAGGACTGCAGCAAAGCCAAAAAGC...ACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR GCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTCGCTGGGTGCCATATaGAATCATGAAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSSLGAI*NHEAVD
Trigger: GTCTACTGCTTCATGATTGCATATGGCACCCAGCGA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTCGCTGGGTGCCATATaGAATCATGAAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLSLGAI*NHEAVD
Trigger: GTCTACTGCTTCATGATTGCATATGGCACCCAGCGA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCAGTGTCCAGTGGAGATaGCAGATCTGTCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFSVQWR*QICLCM
Trigger: CATGCACAGACAGATCTGGCATCTCCACTGGACACT...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGAGTGTCCAGTGGAGATaGCAGATCTGTCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLSVQWR*QICLCM
Trigger: CATGCACAGACAGATCTGGCATCTCCACTGGACACT...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAAGTGTCCAGTGGAGATaGCAGATCTGTCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPSVQWR*QICLCM
Trigger: CATGCACAGACAGATCTGGCATCTCCACTGGACACT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGAGTGTCCAGTGGAGATaGCAGATCTGTCTGTGCATG +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQSVQWR*QICLCM
Trigger: CATGCACAGACAGATCTGGCATCTCCACTGGACACT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTCTGTGTATCGATTGTaGAGTCCAGCTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSSVYRL*SPADQE
Trigger: TTCCTGGTCAGCTGGACTGCACAATCGATACACAGA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR GCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGTCGTACAAGTCGATCTaGGAGGTCTTCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQSYKSI*EVFWYS
Trigger: GCTGTACCAGAAGACCTCGCAGATCGACTTGTACGA...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTCGTACAAGTCGATCTaGGAGGTCTTCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFSYKSI*EVFWYS
Trigger: GCTGTACCAGAAGACCTCGCAGATCGACTTGTACGA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATCGTACAAGTCGATCTaGGAGGTCTTCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPSYKSI*EVFWYS
Trigger: GCTGTACCAGAAGACCTCGCAGATCGACTTGTACGA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCACTGCAGGGTCACCATaGACTCGTACAAGTCGATCT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFTAGSP*TRTSRS
Trigger: AGATCGACTTGTACGAGTGCATGGTGACCCTGCAGT...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGAGACACCCACCACACTaGAGGGTCACCATGCACTCG +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWRHPPH*RVTMHS
Trigger: CGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCT...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCACTTGCATTCTGCGTaGAAGAAGCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNHLHSA*KKLKMF
Trigger: GAACATTTTCAGCTTCTTGCACGCAGAATGCAAGTG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGATCAATAGGGCCTTCTaGTATCCGGAGAGATTCGGC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQINRAF*YPERFG
Trigger: GCCGAATCTCTCCGGATACCAGAAGGCCCTATTGAT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAATCAATAGGGCCTTCTaGTATCCGGAGAGATTCGGC +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPINRAF*YPERFG
Trigger: GCCGAATCTCTCCGGATACCAGAAGGCCCTATTGAT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCATACTCTTCCTATAGCTaGCCCCTGATCAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPYSSYS*PLINRA
Trigger: GGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTA...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCCTTTGCTGCAGTCCTTaGGATTCTGAAGATATGTTA +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTLCCSP*DSEDML
Trigger: TAACATATCTTCAGAATCCCAAGGACTGCAGCAAAG...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTACACACCAGCTTTTTaGCTTTGCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLYTPAF*LCCSPW
Trigger: CCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCAAGATGAGTGTTCGCTaGGTGCCATATGCAATCATG +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPKMSVR*VPYAIM
Trigger: CATGATTGCATATGGCACCCAGCGAACACTCATCTT...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTAAGATGAGTGTTCGCTaGGTGCCATATGCAATCATG +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLKMSVR*VPYAIM
Trigger: CATGATTGCATATGGCACCCAGCGAACACTCATCTT...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCTGACCAGTGTCCAGTaGAGATGCCAGATCTGTCTG +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPLTSVQ*RCQICL
Trigger: CAGACAGATCTGGCATCTCCACTGGACACTGGTCAG...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACTATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: RFHGNFICSSGLVSINGNYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...ATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp CTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGCATTCTGGCTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LQFGVGEHKWQFDCGHSGSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...GCCAGAATGCCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTTCTGAATCTGTTGACTaGAGTGAATTCAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: LPSELYFSASGYVGYLTVSESVD*SEFSGH
Trigger: GTGACCACTGAATTCACTCCAGTCAACAGATTCAGA...AACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTGAAGACTGTCTACAATaGGAAGCTCGACCACTTGAA +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLEDCLQ*EARPLE
Trigger: TTCAAGTGGTCGAGCTTCCCATTGTAGACAGTCTTC...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTGAAGACTGTCTACAATaGGAAGCTCGACCACTTGAA +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSEDCLQ*EARPLE
Trigger: TTCAAGTGGTCGAGCTTCCCATTGTAGACAGTCTTC...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTCTGTGCGTCTGACATaGACTCCAATAACTGGATGT +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPSVRLT*TPITGC
Trigger: ACATCCAGTTATTGGAGTCCATGTCAGACGCACAGA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTACTCTTCAATGGGATaGAAGGCAGCTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLYSSMG*KAASVP
Trigger: GGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCACCATGTACTCTTCAATaGGATGGAAGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PNKPEMVLEMEVIASLGAPCTLQ*DGRQLL
Trigger: CAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGG...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGGCAGAAATTGGTTCCTaGATAAAACAGGACCCTACT +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWAEIGS*IKQDPT
Trigger: AGTAGGGTCCTGTTTTATCCAGGAACCAATTTCTGC...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTAATCCCAAAGATACCTaGTACTCTCAAAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLNPKDT*YSQKQG
Trigger: GCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATT...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp CTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTATGCGCTCTACATGCTaGATTTGTCCAGTTAATCAA +
Preference number: 4 (lower is better)
Translates to: LPSELYFSASGYVGYLTVMRSTC*ICPVNQ
Trigger: TTGATTAACTGGACAAATTCAGCATGTAGAGCGCAT...AACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCAAGTTCTCGGCTAGAGTaGTCAGGATGGTCATTATCT +
Preference number: 4 (lower is better)
Translates to: PNKPEMVLEMEVIASLGASSRLE*SGWSLS
Trigger: AGATAATGACCATCCTGATCACTCTAGCCGAGAACT...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCTCCATCTGTCTGACTaGGGTAGTATAGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFLHLSD*GSIDPS
Trigger: TGACGGATCTATACTACCTCAGTCAGACAGATGGAG...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTGCCATATGCAATCATaGAGCAGTAGACCACATGAT +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPCHMQS*SSRPHD
Trigger: ATCATGTGGTCTACTGCTTCATGATTGCATATGGCA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTTCTGAGATTCCAAGATaGGTGTTCGCTGGGTGCCAT +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPSEIPR*VFAGCH
Trigger: ATGGCACCCAGCGAACACTCATCTTGGAATCTCAGA...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTTTCCAGCCACACCAATaGTATCTCCAGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPFQPHQ*YLQVPW
Trigger: CCATGGAACCTGGAGATATCATTGGTGTGGCTGGAA...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCGATATGTGGGGTACTTaGCCGTTTCTATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSDMWGT*PFLSSL
Trigger: GAGAGAAGATAGAAACGGTCAAGTACCCCACATATC...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CGTCCTTCCCAATTTCCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: RPSQFPVDTFRIAIPMISLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...GGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGGAAATTGGGAAGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCCAATTTCCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACCTTATGGGGACATACTaGAAGGGGCAAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: SQFPVDTFRIAIPMISSHLMGTY*KGQSRK
Trigger: TTTTCTACTTTGCCCCTTTCAGTATGTCCCCATAAG...GTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGGAAATTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCAAGTATTTGACAAACTaGGACACCCACCACACTGCA +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLKYLTN*DTHHTA
Trigger: TGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTT...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCAAGTATTTGACAAACTaGGACACCCACCACACTGCA +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSKYLTN*DTHHTA
Trigger: TGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTT...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTGGCGGATCAAGTATTTaGCAAACTGAGACACCCACC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFGGSSI*QTETPT
Trigger: GGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCC...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTGGCTTTCCTAGACCTTaGGACTCGTATTTATTGTCA +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLGFPRP*DSYLLS
Trigger: TGACAATAAATACGAGTCTCAAGGTCTAGGAAAGCC...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR GCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTTGGCCTTAACAAGCTaGTCTTCTAAAACGCGTACT +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSLALTS*SSKTRT
Trigger: AGTACGCGTTTTAGAAGAGCAGCTTGTTAAGGCCAA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTTCCCGCCAATCACCTaGTCCATCTGTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMFPPIT*SICLTE
Trigger: CTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCAGCTTTTTGGCTTTaGTGCAGTCCTTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQPAFWL*CSPWDS
Trigger: AGAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGG...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCACCAGCTTTTTGGCTTTaGTGCAGTCCTTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPPAFWL*CSPWDS
Trigger: AGAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGG...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCATCGCTGGGTGCCATATaGAATCATGAAGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPSLGAI*NHEAVD
Trigger: GTCTACTGCTTCATGATTGCATATGGCACCCAGCGA...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTCTGTGTATCGATTGTaGAGTCCAGCTGACCAGGAA +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFSVYRL*SPADQE
Trigger: TTCCTGGTCAGCTGGACTGCACAATCGATACACAGA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR GCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGCATGGGAATTTCATCTaGAGTTCGGGGTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRHGNFI*SSGLVS
Trigger: GCTCACCAACCCCGAACTGCAGATGAAATTCCCATG...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTCGTACAAGTCGATCTaGGAGGTCTTCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFSYKSI*EVFWYS
Trigger: GCTGTACCAGAAGACCTCGCAGATCGACTTGTACGA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTTCGTACAAGTCGATCTaGGAGGTCTTCTGGTACAGC +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPSYKSI*EVFWYS
Trigger: GCTGTACCAGAAGACCTCGCAGATCGACTTGTACGA...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCCACTTGCATTCTGCGTaGAAGAAGCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPHLHSA*KKLKMF
Trigger: GAACATTTTCAGCTTCTTGCACGCAGAATGCAAGTG...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTGTGGCCTGTCAAGGTTaGAATCTGCCTAATATTCAT +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSVACQG*NLPNIH
Trigger: ATGAATATTAGGCAGATTGCAACCTTGACAGGCCAC...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGTACTCTTCCTATAGCTaGCCCCTGATCAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRYSSYS*PLINRA
Trigger: GGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTA...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCTCATCTGCATGTCTTTaGAGTTCATTTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTSSACL*SSFPSK
Trigger: CTTAGAAGGAAATGAACTCCAAAGACATGCAGATGA...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTTGCTGCAGTCCTTaGGATTCTGAAGATATGTTA +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNLCCSP*DSEDML
Trigger: TAACATATCTTCAGAATCCCAAGGACTGCAGCAAAG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGCTTTGCTGCAGTCCTTaGGATTCTGAAGATATGTTA +
Preference number: 4 (lower is better)
Translates to: DIFLLECSNTYQASVGGRLCCSP*DSEDML
Trigger: TAACATATCTTCAGAATCCCAAGGACTGCAGCAAAG...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTACACACCAGCTTTTTaGCTTTGCTGCAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFYTPAF*LCCSPW
Trigger: CCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGGCAGTGTTTGTCTTATaGGGACATACTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQAVFVL*GHTERG
Trigger: GCCCCTTTCAGTATGTCCCCATAAGACAAACACTGC...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAGCAGTGTTTGTCTTATaGGGACATACTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPAVFVL*GHTERG
Trigger: GCCCCTTTCAGTATGTCCCCATAAGACAAACACTGC...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTTCTATCTCTGAATCTGTTGACTaGAGTGAATTCAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SELYFSASGYVGYLTVSISESVD*SEFSGH
Trigger: GTGACCACTGAATTCACTCCAGTCAACAGATTCAGA...GATAGAAACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGATGGACTCCAATAACTaGATGTTTGAAGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWMDSNN*MFEAKL
Trigger: AAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCAT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACATGGACTCCAATAACTaGATGTTTGAAGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNMDSNN*MFEAKL
Trigger: AAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCAT...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGTACTCTTCAATGGGATaGAAGGCAGCTTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQYSSMG*KAASVP
Trigger: GGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTA...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCACCATGTACTCTTCAATaGGATGGAAGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPPCTLQ*DGRQLL
Trigger: CAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGG...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGCCATGTACTCTTCAATaGGATGGAAGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLPCTLQ*DGRQLL
Trigger: CAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGG...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCCATGTACTCTTCAATaGGATGGAAGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFPCTLQ*DGRQLL
Trigger: CAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGG...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
3UTR CAA 72 bp CCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACTCATATAACCTTATTT +
Preference number: 4 (lower is better)
Translates to: PPIEAYVSSQLL*VLRVSTHITLF
Trigger: AAATAAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTATGCGCTCTACATGCTaGATTTGTCCAGTTAATCAA +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSMRSTC*ICPVNQ
Trigger: TTGATTAACTGGACAAATTCAGCATGTAGAGCGCAT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGGGATGCGCTCTACATGCTaGATTTGTCCAGTTAATCAA +
Preference number: 4 (lower is better)
Translates to: EFHLQFGVGEHKWQFDCGMRSTC*ICPVNQ
Trigger: TTGATTAACTGGACAAATTCAGCATGTAGAGCGCAT...CCCACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCTCCATCTGTCTGACTaGGGTAGTATAGATCCGTCA +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPLHLSD*GSIDPS
Trigger: TGACGGATCTATACTACCTCAGTCAGACAGATGGAG...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGTATGTTATTCTCCGCTaGACCAGTTCTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: LSLPSELYFSASGYVGYLYVILR*TSSVRS
Trigger: AGATCTGACAGAACTGGTTCAGCGGAGAATAACATA...CAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTGCCATATGCAATCATaGAGCAGTAGACCACATGAT +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSCHMQS*SSRPHD
Trigger: ATCATGTGGTCTACTGCTTCATGATTGCATATGGCA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGATTGTGCAGTCCAGCTaGCCAGGAAATAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQIVQSS*PGNRVI
Trigger: GATAACTCTATTTCCTGGTCAGCTGGACTGCACAAT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR TCA 90 bp ATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCGATCACTCCACGAAGTaGATTTTCTGTGTATCGATT +
Preference number: 4 (lower is better)
Translates to: MISSHTNDISRFHGNFICDHSTK*IFCVSI
Trigger: AATCGATACACAGAAAATTCACTTCGTGGAGTGATC...GCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCGATCACTCCACGAAGTaGATTTTCTGTGTATCGATT +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPDHSTK*IFCVSI
Trigger: AATCGATACACAGAAAATTCACTTCGTGGAGTGATC...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTTCCAGCCACACCAATaGTATCTCCAGGTTCCATGG +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMFQPHQ*YLQVPW
Trigger: CCATGGAACCTGGAGATATCATTGGTGTGGCTGGAA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTACTGTGCATGGGTATaGGGGCATTGCAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYYCAWV*GHCSPC
Trigger: ACAAGGGCTGCAATGCCCTCATACCCATGCACAGTA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCCTTATGGGGACATACTaGAAGGGGCAAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSLMGTY*KGQSRK
Trigger: TTTTCTACTTTGCCCCTTTCAGTATGTCCCCATAAG...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCCTTATGGGGACATACTaGAAGGGGCAAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLLMGTY*KGQSRK
Trigger: TTTTCTACTTTGCCCCTTTCAGTATGTCCCCATAAG...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAAAGTATTTGACAAACTaGGACACCCACCACACTGCA +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPKYLTN*DTHHTA
Trigger: TGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCAAGTATTTGACAAACTaGGACACCCACCACACTGCA +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFKYLTN*DTHHTA
Trigger: TGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTT...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACACAAAAAGCACTCTATaGAGTGCTGTACTTTACAGT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNTKSTL*SAVLYS
Trigger: ACTGTAAAGTACAGCACTTCATAGAGTGCTTTTTGT...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR GCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTTTGTCCTGTACTTCATaGGCTCTACATGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLLSCTS*ALHAEF
Trigger: AAATTCAGCATGTAGAGCGCATGAAGTACAGGACAA...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTTCCCGCCAATCACCTaGTCCATCTGTCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYFPPIT*SICLTE
Trigger: CTCAGTCAGACAGATGGAGCAGGTGATTGGCGGGAA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAGCTTTTTGGCTTTGCTaGAGTCCTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPAFWLC*SPWDSE
Trigger: TTCAGAATCCCAAGGACTGCAGCAAAGCCAAAAAGC...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGCCAGCTTTTTGGCTTTaGTGCAGTCCTTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRPAFWL*CSPWDS
Trigger: AGAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGG...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCATGTCCACTTGCATTCTaGGTGCAAGAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PNKPEMVLEMEVIASLGACPLAF*VQEAEN
Trigger: ATTTTCAGCTTCTTGCACGCAGAATGCAAGTGGACA...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACAAGCACTCTATGAAGTaGTGTACTTTACAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: SLCQFPAALGAESIYSYNKHSMK*CTLQSF
Trigger: AAACGACTGTAAAGTACAGCACTTCATAGAGTGCTT...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTCCAGGAACCAGTCCATaGCCGCATTTTCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFPGTSP*PHFQIF
Trigger: GAAAATCTGAAAATGCGGCCATGGACTGGTTCCTGG...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCCTTTGCTGCAGTCCTTaGGATTCTGAAGATATGTTA +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPLCCSP*DSEDML
Trigger: TAACATATCTTCAGAATCCCAAGGACTGCAGCAAAG...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACACCAATGATCTTTGCTGCAGTCCTTaGGATTCTGAAGATATGTTA +
Preference number: 4 (lower is better)
Translates to: PVDTFRIAIPMISSHTNDLCCSP*DSEDML
Trigger: TAACATATCTTCAGAATCCCAAGGACTGCAGCAAAG...ATCATTGGTGTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAAAGATGAGTGTTCGCTaGGTGCCATATGCAATCATG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPKMSVR*VPYAIM
Trigger: CATGATTGCATATGGCACCCAGCGAACACTCATCTT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCATATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: PNKPEMVLEMEVIASLGAYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGGCAGTGTTTGTCTTATaGGGACATACTGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRAVFVL*GHTERG
Trigger: GCCCCTTTCAGTATGTCCCCATAAGACAAACACTGC...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTCTGAATCTGTTGACTaGAGTGAATTCAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLSESVD*SEFSGH
Trigger: GTGACCACTGAATTCACTCCAGTCAACAGATTCAGA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCATCAATAGGGCCTTCTaGTATCCTGAATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLINRAF*YPEFVQ
Trigger: CTGGACAAATTCAGGATACCAGAAGGCCCTATTGAT...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358307.6
ENST00000557164.5
CDS-3UTR CCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCGAAGACTGTCTACAATaGGAAGCTCGACCACTTGAA +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFEDCLQ*EARPLE
Trigger: TTCAAGTGGTCGAGCTTCCCATTGTAGACAGTCTTC...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTATGGACTCCAATAACTaGATGTTTGAAGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSMDSNN*MFEAKL
Trigger: AAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCAT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGTCTGTGCGTCTGACATaGACTCCAATAACTGGATGT +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQSVRLT*TPITGC
Trigger: ACATCCAGTTATTGGAGTCCATGTCAGACGCACAGA...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCCATGTACTCTTCAATaGGATGGAAGGCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPPCTLQ*DGRQLL
Trigger: CAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGG...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAAATCCCAAAGATACCTaGTACTCTCAAAAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPNPKDT*YSQKQG
Trigger: GCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTCTGGTAGTCCTGCAGTaGATCTTTCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFLVVLQ*IFQRDP
Trigger: AGGATCTCTTTGAAAGATTCACTGCAGGACTACCAG...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCTGGTAGTCCTGCAGTaGATCTTTCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPLVVLQ*IFQRDP
Trigger: AGGATCTCTTTGAAAGATTCACTGCAGGACTACCAG...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTAGTTCTCGGCTAGAGTaGTCAGGATGGTCATTATCT +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPSSRLE*SGWSLS
Trigger: AGATAATGACCATCCTGATCACTCTAGCCGAGAACT...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPSHSLC*YYTPAF
Trigger: AAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQSHSLC*YYTPAF
Trigger: AAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGTGCCATATGCAATCATaGAGCAGTAGACCACATGAT +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQCHMQS*SSRPHD
Trigger: ATCATGTGGTCTACTGCTTCATGATTGCATATGGCA...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTATTGTGCAGTCCAGCTaGCCAGGAAATAGAGTTATC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFIVQSS*PGNRVI
Trigger: GATAACTCTATTTCCTGGTCAGCTGGACTGCACAAT...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR TCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGGATATGTGGGGTACTTaGCCGTTTCTATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRDMWGT*PFLSSL
Trigger: GAGAGAAGATAGAAACGGTCAAGTACCCCACATATC...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCATTGGCTGAAATGGTTTaGACTGAGTTTGGTCGAACT +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPLAEMV*TEFGRT
Trigger: AGTTCGACCAAACTCAGTTCAAACCATTTCAGCCAA...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCTTATGGGGACATACTaGAAGGGGCAAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFLMGTY*KGQSRK
Trigger: TTTTCTACTTTGCCCCTTTCAGTATGTCCCCATAAG...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCATTTGGTGAAGATATaGAGGCCAGGACTAATAGCT +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQHLVKI*RPGLIA
Trigger: AGCTATTAGTCCTGGCCTTCATATCTTCACCAAATG...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTGGAAAATTGCTTGCTaGCACTGTAGGAAGTTAATT +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPWKIAC*HCRKLI
Trigger: AATTAACTTCCTACAGTGTCAGCAAGCAATTTTCCA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTTGTCCTGTACTTCATaGGCTCTACATGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSLSCTS*ALHAEF
Trigger: AAATTCAGCATGTAGAGCGCATGAAGTACAGGACAA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTTGGCCTTAACAAGCTaGTCTTCTAAAACGCGTACT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFLALTS*SSKTRT
Trigger: AGTACGCGTTTTAGAAGAGCAGCTTGTTAAGGCCAA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTGCTTTTTGGCTTTGCTaGAGTCCTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFAFWLC*SPWDSE
Trigger: TTCAGAATCCCAAGGACTGCAGCAAAGCCAAAAAGC...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTGCTTTTTGGCTTTGCTaGAGTCCTTGGGATTCTGAA +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPAFWLC*SPWDSE
Trigger: TTCAGAATCCCAAGGACTGCAGCAAAGCCAAAAAGC...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCACACTTGCATTCTGCGTaGAAGAAGCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPHLHSA*KKLKMF
Trigger: GAACATTTTCAGCTTCTTGCACGCAGAATGCAAGTG...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGTGTCCACTTGCATTCTaGGTGCAAGAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQCPLAF*VQEAEN
Trigger: ATTTTCAGCTTCTTGCACGCAGAATGCAAGTGGACA...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTGTCCACTTGCATTCTaGGTGCAAGAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFCPLAF*VQEAEN
Trigger: ATTTTCAGCTTCTTGCACGCAGAATGCAAGTGGACA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGGTGGCCTGTCAAGGTTaGAATCTGCCTAATATTCAT +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQVACQG*NLPNIH
Trigger: ATGAATATTAGGCAGATTGCAACCTTGACAGGCCAC...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTTCAACTCACTTCCCTaGAGTCCTGGAGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMFNSLP*SPGAQR
Trigger: TCTTTGAGCTCCAGGACTCCAGGGAAGTGAGTTGAA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTACTCTTCCTATAGCTaGCCCCTGATCAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWYSSYS*PLINRA
Trigger: GGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTACTCTTCCTATAGCTaGCCCCTGATCAATAGGGCC +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYYSSYS*PLINRA
Trigger: GGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTTCATCTGCATGTCTTTaGAGTTCATTTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLSSACL*SSFPSK
Trigger: CTTAGAAGGAAATGAACTCCAAAGACATGCAGATGA...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATATCTCCAGGTTCCATaGGAATTTCATCTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPYLQVP*EFHLQF
Trigger: GAACTGCAGATGAAATTCCCATGGAACCTGGAGATA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCATCTGAATCTGTTGACTaGAGTGAATTCAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPSESVD*SEFSGH
Trigger: GTGACCACTGAATTCACTCCAGTCAACAGATTCAGA...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCATCAATAGGGCCTTCTaGTATCCTGAATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFINRAF*YPEFVQ
Trigger: CTGGACAAATTCAGGATACCAGAAGGCCCTATTGAT...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358307.6
ENST00000557164.5
CDS-3UTR CCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTCTGTGCGTCTGACATaGACTCCAATAACTGGATGT +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFSVRLT*TPITGC
Trigger: ACATCCAGTTATTGGAGTCCATGTCAGACGCACAGA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTATGTTATTCTCCGCTaGACCAGTTCTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFYVILR*TSSVRS
Trigger: AGATCTGACAGAACTGGTTCAGCGGAGAATAACATA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGTATGTTATTCTCCGCTaGACCAGTTCTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRYVILR*TSSVRS
Trigger: AGATCTGACAGAACTGGTTCAGCGGAGAATAACATA...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPSHSLC*YYTPAF
Trigger: AAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCT...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTTGCCATATGCAATCATaGAGCAGTAGACCACATGAT +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPCHMQS*SSRPHD
Trigger: ATCATGTGGTCTACTGCTTCATGATTGCATATGGCA...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCGATCACTCCACGAAGTaGATTTTCTGTGTATCGATT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFDHSTK*IFCVSI
Trigger: AATCGATACACAGAAAATTCACTTCGTGGAGTGATC...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCC +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPTRKSA*ERKCIS
Trigger: GGATATACATTTTCTCTCTCAGGCAGACTTCCTAGT...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCTTATGGGGACATACTaGAAGGGGCAAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPLMGTY*KGQSRK
Trigger: TTTTCTACTTTGCCCCTTTCAGTATGTCCCCATAAG...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGAGTATTTTCATTTGGTaGAGATATGAAGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HVICEYIIVLCMGMRALQSIFIW*RYEGQD
Trigger: GTCCTGGCCTTCATATCTTCACCAAATGAAAATACT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTTGTCCTGTACTTCATaGGCTCTACATGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFLSCTS*ALHAEF
Trigger: AAATTCAGCATGTAGAGCGCATGAAGTACAGGACAA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACCCAGCTTTTTGGCTTTaGTGCAGTCCTTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYPAFWL*CSPWDS
Trigger: AGAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGG...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCAAATGTTCTTCAACATaGACCATGTACTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: VICEYIIVLCMGMRALQPKCSST*TMYSSM
Trigger: CATTGAAGAGTACATGGTGCATGTTGAAGAACATTT...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGCACTTGCATTCTGCGTaGAAGAAGCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRHLHSA*KKLKMF
Trigger: GAACATTTTCAGCTTCTTGCACGCAGAATGCAAGTG...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTGTCCACTTGCATTCTaGGTGCAAGAAGCTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFCPLAF*VQEAEN
Trigger: ATTTTCAGCTTCTTGCACGCAGAATGCAAGTGGACA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGCCAGGAACCAGTCCATaGCCGCATTTTCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWPGTSP*PHFQIF
Trigger: GAAAATCTGAAAATGCGGCCATGGACTGGTTCCTGG...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTCATCTGCATGTCTTTaGAGTTCATTTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSSSACL*SSFPSK
Trigger: CTTAGAAGGAAATGAACTCCAAAGACATGCAGATGA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACTTTGCTGCAGTCCTTaGGATTCTGAAGATATGTTA +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPLCCSP*DSEDML
Trigger: TAACATATCTTCAGAATCCCAAGGACTGCAGCAAAG...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGGCAACTCGACAGACCTaGGATGAAAAAGTACACACT +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMATRQT*DEKVHT
Trigger: AGTGTGTACTTTTTCATCCCAGGTCTGTCGAGTTGC...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGTCTGAATCTGTTGACTaGAGTGAATTCAGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRSESVD*SEFSGH
Trigger: GTGACCACTGAATTCACTCCAGTCAACAGATTCAGA...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCATGGACTCCAATAACTaGATGTTTGAAGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFMDSNN*MFEAKL
Trigger: AAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCAT...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTTGTTCTAGCTCAGTTTaGGTGTCATCATTCAATAAA +
Preference number: 4 (lower is better)
Translates to: LCQFPAALGAESIYSYNLCSSSV*VSSFNK
Trigger: TTTATTGAATGATGACACCCAAACTGAGCTAGAACA...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACCTGGTAGTCCTGCAGTaGATCTTTCAAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYLVVLQ*IFQRDP
Trigger: AGGATCTCTTTGAAAGATTCACTGCAGGACTACCAG...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGATATGTGGGGTACTTaGCCGTTTCTATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWDMWGT*PFLSSL
Trigger: GAGAGAAGATAGAAACGGTCAAGTACCCCACATATC...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGATATGTGGGGTACTTaGCCGTTTCTATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYDMWGT*PFLSSL
Trigger: GAGAGAAGATAGAAACGGTCAAGTACCCCACATATC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGAGGAATTCCACCAATTaGAGCCTATGTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWRNSTN*SLCQFP
Trigger: TGGGAACTGACATAGGCTTCAATTGGTGGAATTCCT...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGGGCCTTCTGGTATCCTaGATTTGTCCAGTTAATCAA +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMGLLVS*ICPVNQ
Trigger: TTGATTAACTGGACAAATTCAGGATACCAGAAGGCC...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358307.6
ENST00000557164.5
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGGAAGCTCGACCACTTaGACATTTTTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYGSSTT*TFLSFT
Trigger: AGTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCAAATGTTCTTCAACATaGACCATGTACTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: FELSLVELSLVVYLFHLSKCSST*TMYSSM
Trigger: CATTGAAGAGTACATGGTGCATGTTGAAGAACATTT...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCATAACAATTTGTAAATaGATGGATGCTCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: WLKWFELSLVELSLVVYLITICK*MDALSH
Trigger: ATGGGAGAGAGCATCCATGCATTTACAAATTGTTAT...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR GCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAAAGCACTCTATGAAGTaGTGTACTTTACAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPKHSMK*CTLQSF
Trigger: AAACGACTGTAAAGTACAGCACTTCATAGAGTGCTT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR GCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTCTGTGTATCGATTGTaGAGTCCAGTTTGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFSVYRL*SPVCFC
Trigger: GCAAAAACAAACTGGACTGCACAATCGATACACAGA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCATCATCTGCATGTCTTTaGAGTTCATTTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPSSACL*SSFPSK
Trigger: CTTAGAAGGAAATGAACTCCAAAGACATGCAGATGA...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATCATCTGCATGTCTTTaGAGTTCATTTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPSSACL*SSFPSK
Trigger: CTTAGAAGGAAATGAACTCCAAAGACATGCAGATGA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGCTTTGCTGCAGTCCTTaGGATTCTGAAGATATGTTA +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRLCCSP*DSEDML
Trigger: TAACATATCTTCAGAATCCCAAGGACTGCAGCAAAG...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACAAGATGAGTGTTCGCTaGGTGCCATATGCAATCATG +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYKMSVR*VPYAIM
Trigger: CATGATTGCATATGGCACCCAGCGAACACTCATCTT...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCATCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELSLVVYLFSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGAAGACTGTCTACAATaGGAAGCTCGACCACTTGAA +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYEDCLQ*EARPLE
Trigger: TTCAAGTGGTCGAGCTTCCCATTGTAGACAGTCTTC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGATGGACTCCAATAACTaGATGTTTGAAGCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRMDSNN*MFEAKL
Trigger: AAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCAT...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTCTGTGCGTCTGACATaGACTCCAATAACTGGATGT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYSVRLT*TPITGC
Trigger: ACATCCAGTTATTGGAGTCCATGTCAGACGCACAGA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGTTTAGAAGTCAGAGGTaGGGTGGATATTTACTTCTT +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLFRSQR*GGYLLL
Trigger: AAGAAGTAAATATCCACCCCACCTCTGACTTCTAAA...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360689.9
3UTR CAA 72 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCATCTGAGCTTTATTTCT +
Preference number: 4 (lower is better)
Translates to: LKWFELSLVELS*VVYLFHLSFIS
Trigger: AGAAATAAAGCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYSHSLC*YYTPAF
Trigger: AAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCT...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACCTTATGGGGACATACTaGAAGGGGCAAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYLMGTY*KGQSRK
Trigger: TTTTCTACTTTGCCCCTTTCAGTATGTCCCCATAAG...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGGCCTTCTGGTATCCTaGATTTGTCCAGTTAATCAA +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWGLLVS*ICPVNQ
Trigger: TTGATTAACTGGACAAATTCAGGATACCAGAAGGCC...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358307.6
ENST00000557164.5
CDS-3UTR TCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGTATTTTCATTTGGTaGAGATATGAAGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMSIFIW*RYEGQD
Trigger: GTCCTGGCCTTCATATCTTCACCAAATGAAAATACT...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTTGTCCTGTACTTCATaGGCTCTACATGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMLSCTS*ALHAEF
Trigger: AAATTCAGCATGTAGAGCGCATGAAGTACAGGACAA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTTGGCCTTAACAAGCTaGTCTTCTAAAACGCGTACT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYLALTS*SSKTRT
Trigger: AGTACGCGTTTTAGAAGAGCAGCTTGTTAAGGCCAA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTTGGCCTTAACAAGCTaGTCTTCTAAAACGCGTACT +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWLALTS*SSKTRT
Trigger: AGTACGCGTTTTAGAAGAGCAGCTTGTTAAGGCCAA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAAAATGTTCTTCAACATaGACCATGTACTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPKCSST*TMYSSM
Trigger: CATTGAAGAGTACATGGTGCATGTTGAAGAACATTT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp GAAGAATTTGGAAAAGATAATCCCAAGACTCAGTCCATTGTGAGTCTCCCATTGAAATGTTCTTCAACATaGACCATGTACTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: EEFGKDNPKTQSIVSLPLKCSST*TMYSSM
Trigger: CATTGAAGAGTACATGGTGCATGTTGAAGAACATTT...CAATGGGAGACTCACAATGGACTGAGTCTTGGGATTATCTTTTCCAAATTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGCACTTGCATTCTGCGTaGAAGAAGCTGAAAATGTTC +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWHLHSA*KKLKMF
Trigger: GAACATTTTCAGCTTCTTGCACGCAGAATGCAAGTG...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAATAACAATTTGTAAATaGATGGATGCTCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SILILNLLTGVNSVVTIPITICK*MDALSH
Trigger: ATGGGAGAGAGCATCCATGCATTTACAAATTGTTAT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CCA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTCATCTGCATGTCTTTaGAGTTCATTTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFSSACL*SSFPSK
Trigger: CTTAGAAGGAAATGAACTCCAAAGACATGCAGATGA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTTCTTCATCTACAGTTTaGCTGAAATGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPSSSTV*LKWFEL
Trigger: CAGTTCAAACCATTTCAGCCAAACTGTAGATGAAGA...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAAAAAGTGACACACTTTaGTTGTTGGAAATGAACACA +
Preference number: 4 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPKSDTL*LLEMNT
Trigger: TGTGTTCATTTCCAACAACCAAAGTGTGTCACTTTT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS-3UTR CCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGCAGAAATTGGTTCCTaGATAAAACAGGACCCTACT +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWAEIGS*IKQDPT
Trigger: AGTAGGGTCCTGTTTTATCCAGGAACCAATTTCTGC...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR TCA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGATCACTCCACGAAGTaGATTTTCTGTGTATCGATT +
Preference number: 4 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYDHSTK*IFCVSI
Trigger: AATCGATACACAGAAAATTCACTTCGTGGAGTGATC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGATCACTCCACGAAGTaGATTTTCTGTGTATCGATT +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWDHSTK*IFCVSI
Trigger: AATCGATACACAGAAAATTCACTTCGTGGAGTGATC...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR GCA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTAAATGTTCTTCAACATaGACCATGTACTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPKCSST*TMYSSM
Trigger: CATTGAAGAGTACATGGTGCATGTTGAAGAACATTT...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CCA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTCATCTGCATGTCTTTaGAGTTCATTTCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMSSACL*SSFPSK
Trigger: CTTAGAAGGAAATGAACTCCAAAGACATGCAGATGA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR TCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTGGAAAATTGCTTGCTaGCACTGTAGGAAGTTAATT +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWWKIAC*HCRKLI
Trigger: AATTAACTTCCTACAGTGTCAGCAAGCAATTTTCCA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR GCA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGAAATGTTCTTCAACATaGACCATGTACTCTTCAATG +
Preference number: 4 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWKCSST*TMYSSM
Trigger: CATTGAAGAGTACATGGTGCATGTTGAAGAACATTT...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS GCA 90 bp CGAGACCGAGAGCGAGCTGGGTCCAGGGCGCGCGACCCTGAGCAGTaGCGGCCCCATTCCGCGGGGAGACGAAGGGACGGGTCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RDRERAGSRARDPEQ*RPHSAGRRRDGSAG
Trigger: CCCAGCCGACCCGTCCCTTCGTCTCCCCGCGGAATGGGGCCGGCACTGCTCAGGGTCGCGCGCCCTGGACCCAGCTCGCTCTCGGTCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS TCA 90 bp GACAGCGCGAGACCGAGAGCGAGCTGGGTCCAGGGCGCGCGACCCTaGGCAGTGCCGGCCCCATTCCGCGGGGAGACGAAGGGACGGGTC +
Preference number: 5 (lower is better)
Translates to: DSARPRASWVQGARP*AVPAPFRGETKGRV
Trigger: GACCCGTCCCTTCGTCTCCCCGCGGAATGGGGCCGGCACTGCTCAGGGTCGCGCGCCCTGGACCCAGCTCGCTCTCGGTCTCGCGCTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS TCA 90 bp CAGGAACCGCCGCCGCCGCTTAACGGAGCCTTCGGCGCCACTGACTaGGGCAGAGCGCGAGGCGGCGCGAGCCGGGCAGTCGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: QEPPPPLNGAFGATD*GRARGGASRAVADS
Trigger: GCTGTCAGCGACTGCCCGGCTCGCGCCGCCTCGCGCTCTGCCTCAGTCAGTGGCGCCGAAGGCTCCGTTAAGCGGCGGCGGCGGTTCCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS TCA 90 bp AGCAGTGGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCGCCAGCTaGGCGGGAGGACCGGAGCGCGCCGCCCCAGCACACAAAGTAGTC +
Preference number: 5 (lower is better)
Translates to: SSGPKGCPRAAQTAS*AGGPERAAPAHKVV
Trigger: GACTACTTTGTGTGCTGGGGCGGCGCGCTCCGGTCCTCCCGCTCAGCTGGCGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000556518.5
CDS GCA 90 bp CAAAGTAGTCGCGGGACGAGGGGTGCCGCCGAGGCCAATCAGAGCTaGGCGCCGCGTGAGTGGAGTGCGAGCCGGCCAATCAGAGGGCCG +
Preference number: 5 (lower is better)
Translates to: QSSRGTRGAAEANQS*APREWSASRPIRGP
Trigger: CGGCCCTCTGATTGGCCGGCTCGCACTCCACTCACGCGGCGCGCAGCTCTGATTGGCCTCGGCGGCACCCCTCGTCCCGCGACTACTTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS CCA 90 bp CCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCGCCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PARTRKIPGARDAEQ*TEGLPQSSPDRQLS
Trigger: GCTCAGCTGGCGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000549235.6
ENST00000557164.5
CDS CCA 90 bp GCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCGCCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: AARTRKIPGARDAEQ*TEGLPQSSPDRQLS
Trigger: GCTCAGCTGGCGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394586.6
CDS CCA 90 bp ACGAGGGGTGCCGCCGAGGCCAATCAGAGCTGCGCGCCGCGTGAGTaGAGTGCGAGCCGGCCAATCAGAGGGCCGGAAGATGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: TRGAAEANQSCAPRE*SASRPIRGPEDELP
Trigger: GGGAAGCTCATCTTCCGGCCCTCTGATTGGCCGGCTCGCACTCCACTCACGCGGCGCGCAGCTCTGATTGGCCTCGGCGGCACCCCTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS CCA 90 bp TCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCGCCAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SARTRKIPGARDAEQ*TEGLPQSSPDRQLS
Trigger: GCTCAGCTGGCGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556518.5
CDS GCA 90 bp CGCTCTACATGCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATaGAGAGCAGTGGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCG +
Preference number: 5 (lower is better)
Translates to: RSTCRSDSENSRRPR*RAVDRRAAPEQPRP
Trigger: CGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGCATGTAGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394586.6
CDS GCA 90 bp AAAGCAGCAACCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATaGAGAGCAGTGGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCG +
Preference number: 5 (lower is better)
Translates to: KAATRSDSENSRRPR*RAVDRRAAPEQPRP
Trigger: CGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGGTTGCTGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000549235.6
ENST00000557164.5
CDS GCA 90 bp AAACCCTGTCTCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATaGAGAGCAGTGGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCG +
Preference number: 5 (lower is better)
Translates to: KPCLRSDSENSRRPR*RAVDRRAAPEQPRP
Trigger: CGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGAGACAGGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556518.5
CDS CCA 90 bp CAGCCGCAGCTGCCCCACGATGGGGGAGTGGGAAGGGTGGCTGAGTaGAGGATGCTACTCCCGACCGAACGGAGAGGAAGAAACGGAAAC +
Preference number: 5 (lower is better)
Translates to: QPQLPHDGGVGRVAE*RMLLPTERRGRNGN
Trigger: GTTTCCGTTTCTTCCTCTCCGTTCGGTCGGGAGTAGCATCCTCCACTCAGCCACCCTTCCCACTCCCCCATCGTGGGGCAGCTGCGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000553924.5
ENST00000554610.1
ENST00000557338.5
ENST00000673929.1
ENST00000674118.1
CDS GCA 90 bp AGCTGCCCCACGATGGGGGAGTGGGAAGGGTGGCTGAGTGGAGGATaGTACTCCCGACCGAACGGAGAGGAAGAAACGGAAACAGGAACC +
Preference number: 5 (lower is better)
Translates to: SCPTMGEWEGWLSGG*YSRPNGEEETETGT
Trigger: GGTTCCTGTTTCCGTTTCTTCCTCTCCGTTCGGTCGGGAGTAGCATCCTCCACTCAGCCACCCTTCCCACTCCCCCATCGTGGGGCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000553924.5
ENST00000554610.1
ENST00000557338.5
ENST00000673929.1
ENST00000674118.1
CDS CCA 90 bp CGTTCCAAACTCTTCCCTGTAGCCTTGGGACCCAGATCCCAAGCCTaGGGCGCTTTACGGTGGGAGAGCGAAATGGTGCCCTTAAGACAA +
Preference number: 5 (lower is better)
Translates to: RSKLFPVALGPRSQA*GALRWESEMVPLRQ
Trigger: TTGTCTTAAGGGCACCATTTCGCTCTCCCACCGTAAAGCGCCCCAGGCTTGGGATCTGGGTCCCAAGGCTACAGGGAAGAGTTTGGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS GCA 90 bp GATAGAAGAAGCAGGAAGGATCACTTAAGCCCAAGAGTTCCAGGCTaGAGTGCCACATCGTGCCTGTCAGTAGCCACTTCAGCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DRRSRKDHLSPRVPG*SATSCLSVATSAWA
Trigger: TGCCCAGGCTGAAGTGGCTACTGACAGGCACGATGTGGCACTGCAGCCTGGAACTCTTGGGCTTAAGTGATCCTTCCTGCTTCTTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS GCA 90 bp CTGTGGGCGGATCAAGTATTTGACAAACTGAGACACCCACCACACTaGAGGGTCACCATGCACTCGTACAAGTCGATCTGCGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LWADQVFDKLRHPPH*RVTMHSYKSICEVF
Trigger: GAAGACCTCGCAGATCGACTTGTACGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS GCA 90 bp AAGAAGCAGGAAGGATCACTTAAGCCCAAGAGTTCCAGGCTGCAGTaGCACATCGTGCCTGTCAGTAGCCACTTCAGCCTGGGCAACATA +
Preference number: 5 (lower is better)
Translates to: KKQEGSLKPKSSRLQ*HIVPVSSHFSLGNI
Trigger: TATGTTGCCCAGGCTGAAGTGGCTACTGACAGGCACGATGTGGCACTGCAGCCTGGAACTCTTGGGCTTAAGTGATCCTTCCTGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS TCA 90 bp ACAAGCTGCTCTTCTAAAACGCGTACTCTTCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGTATCCGGAGAGATTCGGCCATTCGC +
Preference number: 5 (lower is better)
Translates to: TSCSSKTRTLPIAGP*SIGPSGIRRDSAIR
Trigger: GCGAATGGCCGAATCTCTCCGGATACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTACGCGTTTTAGAAGAGCAGCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGCTCTTCCCTGTAGCCTaGGGACCCAGATCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWLFPVA*GPRSQA
Trigger: GGCTTGGGATCTGGGTCCCAAGGCTACAGGGAAGAG...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGGCTTCTGTTCCCACTTaGTCTGTGCGTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLASVPT*SVRLTW
Trigger: CCATGTCAGACGCACAGACAAAGTGGGAACAGAAGC...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTCTCTTCCCTGTAGCCTaGGGACCCAGATCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSLFPVA*GPRSQA
Trigger: GGCTTGGGATCTGGGTCCCAAGGCTACAGGGAAGAG...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS TCA 90 bp TCTTTTTCTAGCCAAGGCTGTGGGCGGATCAAGTATTTGACAAACTaGGACACCCACCACACTGCAGGGTCACCATGCACTCGTACAAGT +
Preference number: 5 (lower is better)
Translates to: SFSSQGCGRIKYLTN*DTHHTAGSPCTRTS
Trigger: ACTTGTACGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCCCACAGCCTTGGCTAGAAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGCTTTGCCAGAATCTaGGACAGTTCTCGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLSFARI*DSSRLE
Trigger: CTCTAGCCGAGAACTGTCCAAGATTCTGGCAAAGCT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTC +
Preference number: 5 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLTSFLA*LQSLGF
Trigger: GAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCGAGGAATTCCACCAATaGAAGCCTATGTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SVHCESPIGPASHLVTKFEEFHQ*KPMSVP
Trigger: GGGAACTGACATAGGCTTCAATTGGTGGAATTCCTC...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS TCA 90 bp CTTCTATTTCTTTTTCTAGCCAAGGCTGTGGGCGGATCAAGTATTTaGCAAACTGAGACACCCACCACACTGCAGGGTCACCATGCACTC +
Preference number: 5 (lower is better)
Translates to: LLFLFLAKAVGGSSI*QTETPTTLQGHHAL
Trigger: GAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCCCACAGCCTTGGCTAGAAAAAGAAATAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS GCA 90 bp GCGCCAATTCTGAGATTCCAAGATGAGTGTTCGCTGGGTGCCATATaGAATCATGAAGCAGTAGACCACATGATGGAGCTGACAGCCATA +
Preference number: 5 (lower is better)
Translates to: APILRFQDECSLGAI*NHEAVDHMMELTAI
Trigger: TATGGCTGTCAGCTCCATCATGTGGTCTACTGCTTCATGATTGCATATGGCACCCAGCGAACACTCATCTTGGAATCTCAGAATTGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000554765.1
ENST00000557164.5
ENST00000557536.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCAGCTTTGCCAGAATCTaGGACAGTTCTCGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTSFARI*DSSRLE
Trigger: CTCTAGCCGAGAACTGTCCAAGATTCTGGCAAAGCT...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGTTCTGTCAGATCTTaGGCCTCTTTTTCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLSSVRS*ASFSRQ
Trigger: TTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTC +
Preference number: 5 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTTSFLA*LQSLGF
Trigger: GAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGT...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTTACACACCAGCTTTTaGGCTTTGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLLHTSF*ALLQSL
Trigger: CAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTATTGTGAGTCTCCCATaGGTCCCGCTTCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILIVSLP*VPLLTW
Trigger: CCAAGTGAGAAGCGGGACCAATGGGAGACTCACAAT...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS TCA 90 bp AGTAGACCACATGATGGAGCTGACAGCCATAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTTTGGCTTTGCTGCAGTCCTTGGGAT +
Preference number: 5 (lower is better)
Translates to: SRPHDGADSHSHSLC*YYTPAFWLCCSPWD
Trigger: ATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCTATGGCTGTCAGCTCCATCATGTGGTCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000554765.1
ENST00000557164.5
ENST00000557536.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGCTTTGCCAGAATCTaGGACAGTTCTCGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSFARI*DSSRLE
Trigger: CTCTAGCCGAGAACTGTCCAAGATTCTGGCAAAGCT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGAGCTTTGCCAGAATCTaGGACAGTTCTCGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: GRLSLPSELYFSASGYVGSFARI*DSSRLE
Trigger: CTCTAGCCGAGAACTGTCCAAGATTCTGGCAAAGCT...CCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTC +
Preference number: 5 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWTSFLA*LQSLGF
Trigger: GAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGTTTTCTGTGTATCGATaGTGCAGTCCAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: TNDISRFHGNFICSSGLVFSVYR*CSPADQ
Trigger: CTGGTCAGCTGGACTGCACAATCGATACACAGAAAA...CACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342677.10
CDS-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGCATAAATGGCAATTaGATTGTGGGCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLSINGN*IVGILA
Trigger: GGCCAGAATGCCCACAATCAAATTGCCATTTATGCT...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SVHCESPIGPASHLVTKFLVELS*VVYLFH
Trigger: ATGGAAGAGATAAACGACCAAACTCAGTTCGACCAA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACT +
Preference number: 5 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSSQLL*VLRVST
Trigger: AGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGGGCATTGCAGCCCTaGTTAAAGAGGAATTCCACC +
Preference number: 5 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWRALQP*LKRNST
Trigger: GGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGGGGAAGCTCGACCACTaGAACATTTTTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: TPMISPGSMGISSAVRGWGKLDH*NIFVLH
Trigger: GTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCCC...CCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CAA 90 bp CGTCCTTCCCAATTTCCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCGCTTCTGTTCCCACTTaGTCTGTGCGTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: RPSQFPVDTFRIAIPMISASVPT*SVRLTW
Trigger: CCATGTCAGACGCACAGACAAAGTGGGAACAGAAGC...GGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGGAAATTGGGAAGGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS TCA 90 bp CTTTCAGTCACAAAACTGAGCTCCCTGAAAAGCACAGGCAGTCTTTaGAAGGTTGGGTGCATACACCGAAGCCTGCAAACCAACTATCAA +
Preference number: 5 (lower is better)
Translates to: LSVTKLSSLKSTGSL*KVGCIHRSLQTNYQ
Trigger: TTGATAGTTGGTTTGCAGGCTTCGGTGTATGCACCCAACCTTTCAAAGACTGCCTGTGCTTTTCAGGGAGCTCAGTTTTGTGACTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554667.1
CDS-3UTR CAA 90 bp ATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGCTTTGCCAGAATCTaGGACAGTTCTCGGCTAGAG +
Preference number: 5 (lower is better)
Translates to: MISSHTNDISRFHGNFICSFARI*DSSRLE
Trigger: CTCTAGCCGAGAACTGTCCAAGATTCTGGCAAAGCT...GCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGAGTTCTGTCAGATCTTaGGCCTCTTTTTCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWSSVRS*ASFSRQ
Trigger: TTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACT...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATAGTTCTGTCAGATCTTaGGCCTCTTTTTCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: RFHGNFICSSGLVSINGNSSVRS*ASFSRQ
Trigger: TTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACT...ATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTTTACACACCAGCTTTTaGGCTTTGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILLHTSF*ALLQSL
Trigger: CAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAA...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp ACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTaGATTGTGGGCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: TNDISRFHGNFICSSGLVSINGN*IVGILA
Trigger: GGCCAGAATGCCCACAATCAAATTGCCATTTATGCT...CACCAACCCCGAACTGCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: SLCQFPAALGAESIYSYNICSSG*VSINGN
Trigger: ATTGCCATTTATGCTCACCAACCCCGAACTGCAGAT...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGCCAGCTTCCCAATCCCAAAGATACCTGGTACTCTCAAAAGCAGGGCATGATAGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SQLPNPKDTWYSQKQGMIGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...TATCATGCCCTGCTTTTGAGAGTACCAGGTATCTTTGGGATTGGGAAGCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACT +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSSSQLL*VLRVST
Trigger: AGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACGAGGAATTCCACCAATaGAAGCCTATGTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: SLCQFPAALGAESIYSYNEEFHQ*KPMSVP
Trigger: GGGAACTGACATAGGCTTCAATTGGTGGAATTCCTC...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGACCGTTGAGGAATTCCACCAATaGAAGCCTATGTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LPSELYFSASGYVGYLTVEEFHQ*KPMSVP
Trigger: GGGAACTGACATAGGCTTCAATTGGTGGAATTCCTC...AACGGTCAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTAGGGCATTGCAGCCCTaGTTAAAGAGGAATTCCACC +
Preference number: 5 (lower is better)
Translates to: LCQFPAALGAESIYSYNLRALQP*LKRNST
Trigger: GGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCT...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCAGCTTCTGTTCCCACTTaGTCTGTGCGTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: PNKPEMVLEMEVIASLGAASVPT*SVRLTW
Trigger: CCATGTCAGACGCACAGACAAAGTGGGAACAGAAGC...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCAATTGTGAGTCTCCCATaGGTCCCGCTTCTCACTTGG +
Preference number: 5 (lower is better)
Translates to: PNKPEMVLEMEVIASLGAIVSLP*VPLLTW
Trigger: CCAAGTGAGAAGCGGGACCAATGGGAGACTCACAAT...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp AGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGTTTTCAATCTGTTCTTaGGCCTTAACAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RGIPPIEAYVSSQLLLVLFSICS*ALTSCS
Trigger: AGAGCAGCTTGTTAAGGCCAAAGAACAGATTGAAAA...CAGCACCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTAGTTCTGTCAGATCTTaGGCCTCTTTTTCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSSSVRS*ASFSRQ
Trigger: TTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCAGTTCTGTCAGATCTTaGGCCTCTTTTTCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPSSVRS*ASFSRQ
Trigger: TTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACT...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACACCAATGATTTACACACCAGCTTTTaGGCTTTGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: PVDTFRIAIPMISSHTNDLHTSF*ALLQSL
Trigger: CAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAA...ATCATTGGTGTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTTACACACCAGCTTTTaGGCTTTGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPLHTSF*ALLQSL
Trigger: CAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTTTTCTGTGTATCGATaGTGCAGTCCAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSFSVYR*CSPADQ
Trigger: CTGGTCAGCTGGACTGCACAATCGATACACAGAAAA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR CAA 90 bp TGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGCACACTATGAGACATATACTTAGCATAAATGGCAATTaGATTGTGGGCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: WSRFSLGHQVLHTMRHILSINGN*IVGILA
Trigger: GGCCAGAATGCCCACAATCAAATTGCCATTTATGCT...AAGTATATGTCTCATAGTGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSICSSG*VSINGN
Trigger: ATTGCCATTTATGCTCACCAACCCCGAACTGCAGAT...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: LCQFPAALGAESIYSYNLICSSG*VSINGN
Trigger: ATTGCCATTTATGCTCACCAACCCCGAACTGCAGAT...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: GNFICSSGLVSINGNLIVICSSG*VSINGN
Trigger: ATTGCCATTTATGCTCACCAACCCCGAACTGCAGAT...CACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLCQFPAALGAESIYSYNGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCTTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTLVELS*VVYLFH
Trigger: ATGGAAGAGATAAACGACCAAACTCAGTTCGACCAA...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTGGTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: VKEEFHQLKPMSVPSCSWWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...CCAAGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACT +
Preference number: 5 (lower is better)
Translates to: WLKWFELSLVELSLVVYLSSQLL*VLRVST
Trigger: AGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACT...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACT +
Preference number: 5 (lower is better)
Translates to: LSLPSELYFSASGYVGYLSSQLL*VLRVST
Trigger: AGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACT...CAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCGAGGAATTCCACCAATaGAAGCCTATGTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPEEFHQ*KPMSVP
Trigger: GGGAACTGACATAGGCTTCAATTGGTGGAATTCCTC...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCAGGGCATTGCAGCCCTaGTTAAAGAGGAATTCCACC +
Preference number: 5 (lower is better)
Translates to: FELSLVELSLVVYLFHLSRALQP*LKRNST
Trigger: GGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCT...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCAAGGGCATTGCAGCCCTaGTTAAAGAGGAATTCCACC +
Preference number: 5 (lower is better)
Translates to: PNKPEMVLEMEVIASLGARALQP*LKRNST
Trigger: GGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCT...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCGGGAAGCTCGACCACTaGAACATTTTTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPGKLDH*NIFVLH
Trigger: GTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCCC...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTGGGAAGCTCGACCACTaGAACATTTTTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LCQFPAALGAESIYSYNLGKLDH*NIFVLH
Trigger: GTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCCC...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGCCAATAACTGGATGTTaGAAGCCAAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: DIFLLECSNTYQASVGGRPITGC*KPSFLV
Trigger: CACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGG...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGGCTTCTGTTCCCACTTaGTCTGTGCGTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: HVICEYIIVLCMGMRALQASVPT*SVRLTW
Trigger: CCATGTCAGACGCACAGACAAAGTGGGAACAGAAGC...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCGCTTCTGTTCCCACTTaGTCTGTGCGTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: LKWFELSLVELSLVVYLFASVPT*SVRLTW
Trigger: CCATGTCAGACGCACAGACAAAGTGGGAACAGAAGC...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TCAGTCCATTGTGAGTCTCCCATTGGTCCCGCTTCTCACTTGGTCACCAAGTTCTGGGGTACTTTGTTTTaGCCTCCTTTAATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: SVHCESPIGPASHLVTKFWGTLF*PPLIKK
Trigger: CTTCTTTATTAAAGGAGGCAAAAACAAAGTACCCCA...GAACTTGGTGACCAAGTGAGAAGCGGGACCAATGGGAGACTCACAATGGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTGGTCCCGCTTCTCACTaGGTCACCAAGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFGPASH*VTKFCT
Trigger: TGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACC...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACTTAAGCGTTCAAGCTTaGCCAGAATCTTGGACAGTT +
Preference number: 5 (lower is better)
Translates to: SLCQFPAALGAESIYSYNLSVQA*PESWTV
Trigger: AACTGTCCAAGATTCTGGCAAAGCTTGAACGCTTAA...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCAGTTCTGTCAGATCTTaGGCCTCTTTTTCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: FELSLVELSLVVYLFHLSSSVRS*ASFSRQ
Trigger: TTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACT...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTC +
Preference number: 5 (lower is better)
Translates to: HVICEYIIVLCMGMRALQTSFLA*LQSLGF
Trigger: GAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTTACACACCAGCTTTTaGGCTTTGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FELSLVELSLVVYLFHLSLHTSF*ALLQSL
Trigger: CAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTACTTGTTACACACCAGCTTTTaGGCTTTGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSLPSELYFSASGYVGYLLHTSF*ALLQSL
Trigger: CAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAA...CAAGTACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTTTTCTGTGTATCGATaGTGCAGTCCAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: FELSLVELSLVVYLFHLSFSVYR*CSPADQ
Trigger: CTGGTCAGCTGGACTGCACAATCGATACACAGAAAA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR CAA 90 bp CCAAACAAACCTGAAATGGTTTTAGAAATGGAGGTGATAGCTTCTCTGGGAGCATTTTCTGTGTATCGATaGTGCAGTCCAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: PNKPEMVLEMEVIASLGAFSVYR*CSPADQ
Trigger: CTGGTCAGCTGGACTGCACAATCGATACACAGAAAA...TGCTCCCAGAGAAGCTATCACCTCCATTTCTAAAACCATTTCAGGTTTGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp TCCCAATTTCCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACAGCATAAATGGCAATTaGATTGTGGGCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SQFPVDTFRIAIPMISSHSINGN*IVGILA
Trigger: GGCCAGAATGCCCACAATCAAATTGCCATTTATGCT...GTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGGAAATTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: WLKWFELSLVELSLVVYLICSSG*VSINGN
Trigger: ATTGCCATTTATGCTCACCAACCCCGAACTGCAGAT...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ATGATTTCCAGCCACACCAATGATATCTCCAGGTTCCATGGGAATTTCATCTGCGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: MISSHTNDISRFHGNFICGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...GCAGATGAAATTCCCATGGAACCTGGAGATATCATTGGTGTGGCTGGAAATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACT +
Preference number: 5 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPSSQLL*VLRVST
Trigger: AGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACT...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCAGTTCCCAGCTGCTCTaGGTGCTGAGAGTATCTACT +
Preference number: 5 (lower is better)
Translates to: LKWFELSLVELSLVVYLFSSQLL*VLRVST
Trigger: AGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACT...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCGAGGAATTCCACCAATaGAAGCCTATGTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: FELSLVELSLVVYLFHLSEEFHQ*KPMSVP
Trigger: GGGAACTGACATAGGCTTCAATTGGTGGAATTCCTC...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCAGGGCATTGCAGCCCTaGTTAAAGAGGAATTCCACC +
Preference number: 5 (lower is better)
Translates to: LKWFELSLVELSLVVYLFRALQP*LKRNST
Trigger: GGTGGAATTCCTCTTTAACAAGGGCTGCAATGCCCT...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: SLCQFPAALGAESIYSYNLILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACTTGAAGCCAAGCTTCTaGGTGGCTTCTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: SLCQFPAALGAESIYSYNLKPSF*VASSIS
Trigger: AGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAA...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GACATTTTTCTTTTAGAATGCAGTAACACCTACCAGGCCTCTGTAGGAGGCAGGTTGAAGCCAAGCTTCTaGGTGGCTTCTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: DIFLLECSNTYQASVGGRLKPSF*VASSIS
Trigger: AGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAA...CCTGCCTCCTACAGAGGCCTGGTAGGTGTTACTGCATTCTAAAAGAAAAATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTCCAATAACTGGATGTTaGAAGCCAAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSPITGC*KPSFLV
Trigger: CACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGG...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTGCTTCTGTTCCCACTTaGTCTGTGCGTCTGACATGG +
Preference number: 5 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPASVPT*SVRLTW
Trigger: CCATGTCAGACGCACAGACAAAGTGGGAACAGAAGC...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTTCAAAAGAAAATCCCTaGTCCTCAAGCAGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: LCQFPAALGAESIYSYNLSKENP*SSSSSG
Trigger: ACCTGAGCTGCTTGAGGACAAGGGATTTTCTTTTGA...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CAA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGGGTCCCGCTTCTCACTaGGTCACCAAGTTCTGCACA +
Preference number: 5 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMGPASH*VTKFCT
Trigger: TGTGCAGAACTTGGTGACCAAGTGAGAAGCGGGACC...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000673929.1
CDS TCA 90 bp ACTCGACAGACCTGGGATGAAAAAGTACACACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCCAGGATCACTCCACGAAGTGAATTT +
Preference number: 5 (lower is better)
Translates to: TRQTWDEKVHTRKSA*ERKCISRITPRSEF
Trigger: AAATTCACTTCGTGGAGTGATCCTGGATATACATTTTCTCTCTCAGGCAGACTTCCTAGTGTGTACTTTTTCATCCCAGGTCTGTCGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTTAAGCGTTCAAGCTTaGCCAGAATCTTGGACAGTT +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSLSVQA*PESWTV
Trigger: AACTGTCCAAGATTCTGGCAAAGCTTGAACGCTTAA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTTTTCAATCTGTTCTTaGGCCTTAACAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GRLSLPSELYFSASGYVGFSICS*ALTSCS
Trigger: AGAGCAGCTTGTTAAGGCCAAAGAACAGATTGAAAA...CCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGAGTTCTGTCAGATCTTaGGCCTCTTTTTCCCGCCAA +
Preference number: 5 (lower is better)
Translates to: HVICEYIIVLCMGMRALQSSVRS*ASFSRQ
Trigger: TTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCAGAGTAAGGACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTC +
Preference number: 5 (lower is better)
Translates to: IQWSQYHHQIRINFLRVRTSFLA*LQSLGF
Trigger: GAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGT...CCTTACTCTGAGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTC +
Preference number: 5 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFTSFLA*LQSLGF
Trigger: GAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGT...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCAATCTGCAGTTCGGGGTaGGTGAGCATAAATGGCAAT +
Preference number: 5 (lower is better)
Translates to: SILILNLLTGVNSVVTIPICSSG*VSINGN
Trigger: ATTGCCATTTATGCTCACCAACCCCGAACTGCAGAT...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTTTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: VVYLFHLSFISQPQDMWGLVELS*VVYLFH
Trigger: ATGGAAGAGATAAACGACCAAACTCAGTTCGACCAA...ACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: WLKWFELSLVELSLVVYLWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCCTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPLILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGGAATTTCATCTGCAGTTCGGGGTTGGTGAGCATAAATGGCAATTTGATTGTGCTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: GNFICSSGLVSINGNLIVLILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...CACAATCAAATTGCCATTTATGCTCACCAACCCCGAACTGCAGATGAAATTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTTTGAAGCCAAGCTTCTaGGTGGCTTCTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: LCQFPAALGAESIYSYNLLKPSF*VASSIS
Trigger: AGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAA...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGTTTGAAGCCAAGCTTCTaGGTGGCTTCTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: VVYLFHLSFISQPQDMWGLKPSF*VASSIS
Trigger: AGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAA...ACCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CAA 90 bp GGAGCTGTTCCGATCTTCTCAATAGTTCACACAGGTCTCTCAGATATAGGCACCAGTGACACACTTTGGTaGTTGGAAATGAACACAAAT +
Preference number: 5 (lower is better)
Translates to: GAVPIFSIVHTGLSDIGTSDTLW*LEMNTN
Trigger: ATTTGTGTTCATTTCCAACAACCAAAGTGTGTCACT...GGTGCCTATATCTGAGAGACCTGTGTGAACTATTGAGAAGATCGGAACAGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS-3UTR CAA 90 bp AGCCTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACGTGAATAGACTTCTGTaGTTTCAACACATGATGCTT +
Preference number: 5 (lower is better)
Translates to: SLCQFPAALGAESIYSYNVNRLL*FQHMML
Trigger: AAGCATCATGTGTTGAAACAACAGAAGTCTATTCAC...GTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTAAGCGTTCAAGCTTaGCCAGAATCTTGGACAGTT +
Preference number: 5 (lower is better)
Translates to: WLKWFELSLVELSLVVYLLSVQA*PESWTV
Trigger: AACTGTCCAAGATTCTGGCAAAGCTTGAACGCTTAA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTTAAGCGTTCAAGCTTaGCCAGAATCTTGGACAGTT +
Preference number: 5 (lower is better)
Translates to: FELSLVELSLVVYLFHLSLSVQA*PESWTV
Trigger: AACTGTCCAAGATTCTGGCAAAGCTTGAACGCTTAA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTATGTCAGTTCCCAGCTGCTCTTGGTGCTGAGAGTATCTACTCATATAACCTTTTTTCAATCTGTTCTTaGGCCTTAACAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LCQFPAALGAESIYSYNLFSICS*ALTSCS
Trigger: AGAGCAGCTTGTTAAGGCCAAAGAACAGATTGAAAA...AAGGTTATATGAGTAGATACTCTCAGCACCAAGAGCAGCTGGGAACTGACATAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTTTTCTGTGTATCGATaGTGCAGTCCAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFFSVYR*CSPADQ
Trigger: CTGGTCAGCTGGACTGCACAATCGATACACAGAAAA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR CAA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGAGCATAAATGGCAATTaGATTGTGGGCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: HVICEYIIVLCMGMRALQSINGN*IVGILA
Trigger: GGCCAGAATGCCCACAATCAAATTGCCATTTATGCT...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACCAGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ILILNLLTGVNSVVTIPPGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...TGGTGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCATCTGAGCTTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FELSLVELSLVVYLFHLSLVELS*VVYLFH
Trigger: ATGGAAGAGATAAACGACCAAACTCAGTTCGACCAA...GCTCAGATGGAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTTCCCAATAACTGGATGTTaGAAGCCAAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LKWFELSLVELSLVVYLFPITGC*KPSFLV
Trigger: CACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGG...GAAGAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGTCGTTTATCTCTTCCATCTGAGCTTTATTTCTCAGCCTCAGGATATGTGGGGATTGTGCAGTCCAGTTaGTTTTTGCCTCCTTTAATA +
Preference number: 5 (lower is better)
Translates to: GRLSLPSELYFSASGYVGIVQSS*FLPPLI
Trigger: TATTAAAGGAGGCAAAAACAAACTGGACTGCACAAT...CCCCACATATCCTGAGGCTGAGAAATAAAGCTCAGATGGAAGAGATAAACGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CAA 90 bp TCCCAATTTCCTGTTGACACCTTTAGAATAGCCATCCCAATGATTTCCAGCCACGTGAATAGACTTCTGTaGTTTCAACACATGATGCTT +
Preference number: 5 (lower is better)
Translates to: SQFPVDTFRIAIPMISSHVNRLL*FQHMML
Trigger: AAGCATCATGTGTTGAAACAACAGAAGTCTATTCAC...GTGGCTGGAAATCATTGGGATGGCTATTCTAAAGGTGTCAACAGGAAATTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342677.10
ENST00000674118.1
CDS-3UTR CAA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTC +
Preference number: 5 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYTSFLA*LQSLGF
Trigger: GAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGT...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTTACACACCAGCTTTTaGGCTTTGCTGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMLHTSF*ALLQSL
Trigger: CAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTGGATATGTGGGGTACTaGACCGTTTCTATCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPGYVGY*TVSIFS
Trigger: AGAGAAGATAGAAACGGTCAAGTACCCCACATATCC...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TCCATTCTCATTCTGAATCTGTTGACTGGAGTGAATTCAGTGGTCACAATACCACTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: SILILNLLTGVNSVVTIPLILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...TGGTATTGTGACCACTGAATTCACTCCAGTCAACAGATTCAGAATGAGAATGGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ACTGGAGTGAATTCAGTGGTCACAATACCACCATCAAATAAGAATCAACTTCCTCCAATAACTGGATGTTaGAAGCCAAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: TGVNSVVTIPPSNKNQLPPITGC*KPSFLV
Trigger: CACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGG...AGGAAGTTGATTCTTATTTGATGGTGGTATTGTGACCACTGAATTCACTCCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTCCAATAACTGGATGTTaGAAGCCAAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFPITGC*KPSFLV
Trigger: CACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGG...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGCCCTGGGGTACTTTGTTTTaGCCTCCTTTAATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: VICEYIIVLCMGMRALQPWGTLF*PPLIKK
Trigger: CTTCTTTATTAAAGGAGGCAAAAACAAAGTACCCCA...GGGCTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR CAA 90 bp CTTGTTAAAGAGGAATTCCACCAATTGAAGCCTATGTCAGTTCCCAGCTGCTCTTTTTCTGTGTATCGATaGTGCAGTCCAGTTTGTTTT +
Preference number: 5 (lower is better)
Translates to: LVKEEFHQLKPMSVPSCSFSVYR*CSPVCF
Trigger: AAAACAAACTGGACTGCACAATCGATACACAGAAAA...AGAGCAGCTGGGAACTGACATAGGCTTCAATTGGTGGAATTCCTCTTTAACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCGTGAATAGACTTCTGTaGTTTCAACACATGATGCTT +
Preference number: 5 (lower is better)
Translates to: WLKWFELSLVELSLVVYLVNRLL*FQHMML
Trigger: AAGCATCATGTGTTGAAACAACAGAAGTCTATTCAC...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGTTTTCAATCTGTTCTTaGGCCTTAACAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HVICEYIIVLCMGMRALQFSICS*ALTSCS
Trigger: AGAGCAGCTTGTTAAGGCCAAAGAACAGATTGAAAA...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTTTTCTGTGTATCGATaGTGCAGTCCAGCTGACCAG +
Preference number: 5 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYFSVYR*CSPADQ
Trigger: CTGGTCAGCTGGACTGCACAATCGATACACAGAAAA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR CAA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTCTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFLILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGGGAAGCTCGACCACTaGAACATTTTTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYGKLDH*NIFVLH
Trigger: GTGAAGGACAAAAATGTTCAAGTGGTCGAGCTTCCC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CCTTATTTTGTTAGATCAGAGCCCTCTTCATCTACAGTTTGGCTGAAATGGTTTTTGAAGCCAAGCTTCTaGGTGGCTTCTTCTATTTCT +
Preference number: 5 (lower is better)
Translates to: PYFVRSEPSSSTVWLKWFLKPSF*VASSIS
Trigger: AGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAA...AAACCATTTCAGCCAAACTGTAGATGAAGAGGGCTCTGATCTAACAAAATAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp TGGCTGAAATGGTTTGAACTGAGTTTGGTCGAACTGAGTTTGGTCGTTTATCTCTGGGGTACTTTGTTTTaGCCTCCTTTAATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: WLKWFELSLVELSLVVYLWGTLF*PPLIKK
Trigger: CTTCTTTATTAAAGGAGGCAAAAACAAAGTACCCCA...GAGATAAACGACCAAACTCAGTTCGACCAAACTCAGTTCAAACCATTTCAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGAGCATAAATGGCAATTaGATTGTGGGCATTCTGGCC +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWSINGN*IVGILA
Trigger: GGCCAGAATGCCCACAATCAAATTGCCATTTATGCT...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTGGTTTGAACTGAGTTaGGTCGAACTGAGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWWFELS*VELSLV
Trigger: GACCAAACTCAGTTCGACCAAACTCAGTTCAAACCA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACCCAATAACTGGATGTTaGAAGCCAAGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYPITGC*KPSFLV
Trigger: CACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGG...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp CATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGAGGGCATTGCAGTGGGGTACTTTGTTTTaGCCTCCTTTAATAAAGAAG +
Preference number: 5 (lower is better)
Translates to: HVICEYIIVLCMGMRALQWGTLF*PPLIKK
Trigger: CTTCTTTATTAAAGGAGGCAAAAACAAAGTACCCCA...CTGCAATGCCCTCATACCCATGCACAGTACAATAATGTACTCACATATAACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS-3UTR CAA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTCAAAAGAAAATCCCTaGTCCTCAAGCAGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYSKENP*SSSSSG
Trigger: ACCTGAGCTGCTTGAGGACAAGGGATTTTCTTTTGA...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTTAAGCGTTCAAGCTTaGCCAGAATCTTGGACAGTT +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWLSVQA*PESWTV
Trigger: AACTGTCCAAGATTCTGGCAAAGCTTGAACGCTTAA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp ACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTATGTTTTCAATCTGTTCTTaGGCCTTAACAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: TTCLHVICEYIIVLCMGMFSICS*ALTSCS
Trigger: AGAGCAGCTTGTTAAGGCCAAAGAACAGATTGAAAA...CATACCCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTTGGTCGAACTGAGTTaGGTCGTTTATCTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWLVELS*VVYLFH
Trigger: ATGGAAGAGATAAACGACCAAACTCAGTTCGACCAA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGCTCATTCTGAATCTGTaGACTGGAGTGAATTCAGTG +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWLILNL*TGVNSV
Trigger: CACTGAATTCACTCCAGTCAACAGATTCAGAATGAG...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTTTTCAATCTGTTCTTaGGCCTTAACAAGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWFSICS*ALTSCS
Trigger: AGAGCAGCTTGTTAAGGCCAAAGAACAGATTGAAAA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp GGGCAAAGTAGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACGTGAATAGACTTCTGTaGTTTCAACACATGATGCTT +
Preference number: 5 (lower is better)
Translates to: GQSRKQPVCMLYVSTLLYVNRLL*FQHMML
Trigger: AAGCATCATGTGTTGAAACAACAGAAGTCTATTCAC...GTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCTACTTTGCCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGGTGAATAGACTTCTGTaGTTTCAACACATGATGCTT +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWVNRLL*FQHMML
Trigger: AAGCATCATGTGTTGAAACAACAGAAGTCTATTCAC...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS-3UTR CAA 90 bp AGAAAACAACCTGTTTGCATGTTATATGTGAGTACATTATTGTACTGTGCATGGTCCGTCATTATAGACTaGTATGGGGTAATTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RKQPVCMLYVSTLLYCAWSVIID*YGVILF
Trigger: GAAAAGAATTACCCCATACAAGTCTATAATGACGGA...CCATGCACAGTACAATAATGTACTCACATATAACATGCAAACAGGTTGTTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358307.6
CDS TCA 72 bp AGGCAGAGCGCGAGGCGGCGCGAGCCGGGCAGTCGCTaGCAGCGCGAGACCGAGAGCGAGCTGGGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RQSARRREPGSR*QRETESELGPG
Trigger: CCCTGGACCCAGCTCGCTCTCGGTCTCGCGCTGTCAGCGACTGCCCGGCTCGCGCCGCCTCGCGCTCTGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS TCA 72 bp CCGCCGCCGCTTAACGGAGCCTTCGGCGCCACTGACTaGGGCAGAGCGCGAGGCGGCGCGAGCCGGGCAGTC +
Preference number: 6 (lower is better)
Translates to: PPPLNGAFGATD*GRARGGASRAV
Trigger: GACTGCCCGGCTCGCGCCGCCTCGCGCTCTGCCTCAGTCAGTGGCGCCGAAGGCTCCGTTAAGCGGCGGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673929.1
ENST00000674118.1
CDS GCA 72 bp GAGCGAGCTGGGTCCAGGGCGCGCGACCCTGAGCAGTaGCGGCCCCATTCCGCGGGGAGACGAAGGGACGGG +
Preference number: 6 (lower is better)
Translates to: ERAGSRARDPEQ*RPHSAGRRRDG
Trigger: CCCGTCCCTTCGTCTCCCCGCGGAATGGGGCCGGCACTGCTCAGGGTCGCGCGCCCTGGACCCAGCTCGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS GCA 72 bp GGAGCAGAGGCGGTCTCCGCCGCTCCCCGTCGCAGCTaGCAAAGCCACAGCCCTCAGCCGCAGCTGCCCCAC +
Preference number: 6 (lower is better)
Translates to: GAEAVSAAPRRS*QSHSPQPQLPH
Trigger: GTGGGGCAGCTGCGGCTGAGGGCTGTGGCTTTGGCAGCTGCGACGGGGAGCGGCGGAGACCGCCTCTGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358307.6
ENST00000553924.5
ENST00000554610.1
ENST00000556292.1
ENST00000557338.5
ENST00000673929.1
ENST00000674118.1
CDS GCA 72 bp CGCGGGACGAGGGGTGCCGCCGAGGCCAATCAGAGCTaGGCGCCGCGTGAGTGGAGTGCGAGCCGGCCAATC +
Preference number: 6 (lower is better)
Translates to: RGTRGAAEANQS*APREWSASRPI
Trigger: GATTGGCCGGCTCGCACTCCACTCACGCGGCGCGCAGCTCTGATTGGCCTCGGCGGCACCCCTCGTCCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS TCA 72 bp AGACCGAGAGCGAGCTGGGTCCAGGGCGCGCGACCCTaGGCAGTGCCGGCCCCATTCCGCGGGGAGACGAAG +
Preference number: 6 (lower is better)
Translates to: RPRASWVQGARP*AVPAPFRGETK
Trigger: CTTCGTCTCCCCGCGGAATGGGGCCGGCACTGCTCAGGGTCGCGCGCCCTGGACCCAGCTCGCTCTCGGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673929.1
CDS GCA 72 bp ACCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATaGAGAGCAGTGGACCGAAGGGCTGCCCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: TRSDSENSRRPR*RAVDRRAAPEQ
Trigger: CTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000549235.6
ENST00000557164.5
CDS GCA 72 bp TGCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATaGAGAGCAGTGGACCGAAGGGCTGCCCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: CRSDSENSRRPR*RAVDRRAAPEQ
Trigger: CTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394586.6
CDS GCA 72 bp CTCCGCTCGGACTCGGAAAATTCCCGGCGCCCGCGATaGAGAGCAGTGGACCGAAGGGCTGCCCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: LRSDSENSRRPR*RAVDRRAAPEQ
Trigger: CTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGTCCGAGCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556518.5
CDS CCA 72 bp ACTCGGAAAATTCCCGGCGCCCGCGATGCAGAGCAGTaGACCGAAGGGCTGCCCCAGAGCAGCCCAGACCGC +
Preference number: 6 (lower is better)
Translates to: TRKIPGARDAEQ*TEGLPQSSPDR
Trigger: GCGGTCTGGGCTGCTCTGGGGCAGCCCTTCGGTCCACTGCTCTGCATCGCGGGCGCCGGGAATTTTCCGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000549235.6
ENST00000556518.5
ENST00000557164.5
CDS TCA 72 bp GCAGCTGCCCCACGATGGGGGAGTGGGAAGGGTGGCTaGGTGGAGGATGCTACTCCCGACCGAACGGAGAGG +
Preference number: 6 (lower is better)
Translates to: AAAPRWGSGKGG*VEDATPDRTER
Trigger: CCTCTCCGTTCGGTCGGGAGTAGCATCCTCCACTCAGCCACCCTTCCCACTCCCCCATCGTGGGGCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358307.6
ENST00000553924.5
ENST00000554610.1
ENST00000556292.1
ENST00000557338.5
ENST00000673929.1
ENST00000674118.1
CDS CCA 72 bp CTGCCCCACGATGGGGGAGTGGGAAGGGTGGCTGAGTaGAGGATGCTACTCCCGACCGAACGGAGAGGAAGA +
Preference number: 6 (lower is better)
Translates to: LPHDGGVGRVAE*RMLLPTERRGR
Trigger: TCTTCCTCTCCGTTCGGTCGGGAGTAGCATCCTCCACTCAGCCACCCTTCCCACTCCCCCATCGTGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000358307.6
ENST00000553924.5
ENST00000554610.1
ENST00000556292.1
ENST00000557338.5
ENST00000673929.1
ENST00000674118.1
CDS CCA 72 bp CTCTTCCCTGTAGCCTTGGGACCCAGATCCCAAGCCTaGGGCGCTTTACGGTGGGAGAGCGAAATGGTGCCC +
Preference number: 6 (lower is better)
Translates to: LFPVALGPRSQA*GALRWESEMVP
Trigger: GGGCACCATTTCGCTCTCCCACCGTAAAGCGCCCCAGGCTTGGGATCTGGGTCCCAAGGCTACAGGGAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS CAA 72 bp TCCCAACATTTTGGGTGGCCGAGGTGGGCAGGTCGCTaGAGCTCAGAGTTCGAGACCAGCCTGGGCAACACA +
Preference number: 6 (lower is better)
Translates to: SQHFGWPRWAGR*SSEFETSLGNT
Trigger: TGTGTTGCCCAGGCTGGTCTCGAACTCTGAGCTCAAGCGACCTGCCCACCTCGGCCACCCAAAATGTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556518.5
CDS GCA 72 bp GAAGGATCACTTAAGCCCAAGAGTTCCAGGCTGCAGTaGCACATCGTGCCTGTCAGTAGCCACTTCAGCCTG +
Preference number: 6 (lower is better)
Translates to: EGSLKPKSSRLQ*HIVPVSSHFSL
Trigger: CAGGCTGAAGTGGCTACTGACAGGCACGATGTGGCACTGCAGCCTGGAACTCTTGGGCTTAAGTGATCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360689.9
CDS CCA 72 bp TTGGGACCCAGATCCCAAGCCTGGGGCGCTTTACGGTaGGAGAGCGAAATGGTGCCCTTAAGACAAGAATCA +
Preference number: 6 (lower is better)
Translates to: LGPRSQAWGALR*ESEMVPLRQES
Trigger: TGATTCTTGTCTTAAGGGCACCATTTCGCTCTCCCACCGTAAAGCGCCCCAGGCTTGGGATCTGGGTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS TCA 72 bp CTTTTTCTAGCCAAGGCTGTGGGCGGATCAAGTATTTaGCAAACTGAGACACCCACCACACTGCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: LFLAKAVGGSSI*QTETPTTLQGH
Trigger: GTGACCCTGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTTGATCCGCCCACAGCCTTGGCTAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS TCA 72 bp TCTTCTAAAACGCGTACTCTTCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGTATCCGGAGAGATTCG +
Preference number: 6 (lower is better)
Translates to: SSKTRTLPIAGP*SIGPSGIRRDS
Trigger: CGAATCTCTCCGGATACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTACGCGTTTTAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000673929.1
ENST00000674118.1
CDS TCA 72 bp ACAAAACTGAGCTCCCTGAAAAGCACAGGCAGTCTTTaGAAGGTTGGGTGCATACACCGAAGCCTGCAAACC +
Preference number: 6 (lower is better)
Translates to: TKLSSLKSTGSL*KVGCIHRSLQT
Trigger: GGTTTGCAGGCTTCGGTGTATGCACCCAACCTTTCAAAGACTGCCTGTGCTTTTCAGGGAGCTCAGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554667.1
CDS GCA 72 bp GATCAAGTATTTGACAAACTGAGACACCCACCACACTaGAGGGTCACCATGCACTCGTACAAGTCGATCTGC +
Preference number: 6 (lower is better)
Translates to: DQVFDKLRHPPH*RVTMHSYKSIC
Trigger: GCAGATCGACTTGTACGAGTGCATGGTGACCCTGCAGTGTGGTGGGTGTCTCAGTTTGTCAAATACTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS CAA 72 bp CACAAAACTGAGCTCCCTGAAAAGCACAGGCAGTCTTaGAAAGGTTGGGTGCATACACCGAAGCCTGCAAAC +
Preference number: 6 (lower is better)
Translates to: HKTELPEKHRQS*KGWVHTPKPAN
Trigger: GTTTGCAGGCTTCGGTGTATGCACCCAACCTTTCAAAGACTGCCTGTGCTTTTCAGGGAGCTCAGTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554667.1
CDS CCA 72 bp ATGTTATTCTCCGCTGAACCAGTTCTGTCAGATCTTTaGCCTCTTTTTCCCGCCAATCACCTGCTCCATCTG +
Preference number: 6 (lower is better)
Translates to: MLFSAEPVLSDL*PLFPANHLLHL
Trigger: CAGATGGAGCAGGTGATTGGCGGGAAAAAGAGGCCAAAGATCTGACAGAACTGGTTCAGCGGAGAATAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS CAA 90 bp CCTTTCAGTCACAAAACTGAGCTCCCTGAAAAGCACAGGCAGTCTTaGAAAGGTTGGGTGCATACACCGAAGCCTGCAAACCAACTATCA +
Preference number: 6 (lower is better)
Translates to: PFSHKTELPEKHRQS*KGWVHTPKPANQLS
Trigger: TGATAGTTGGTTTGCAGGCTTCGGTGTATGCACCCAACCTTTCAAAGACTGCCTGTGCTTTTCAGGGAGCTCAGTTTTGTGACTGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554667.1
CDS TCA 72 bp CATGATGGAGCTGACAGCCATAGCCACAGCCTTTGTTaGTATTACACACCAGCTTTTTGGCTTTGCTGCAGT +
Preference number: 6 (lower is better)
Translates to: HDGADSHSHSLC*YYTPAFWLCCS
Trigger: ACTGCAGCAAAGCCAAAAAGCTGGTGTGTAATATCAACAAAGGCTGTGGCTATGGCTGTCAGCTCCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000554765.1
ENST00000557164.5
ENST00000557536.5
ENST00000673929.1
ENST00000674118.1
CDS TCA 72 bp TCTTCTAAAACGCGTACTCTTCCTATAGCTGGCCCCTaGTCAATAGGGCCTTCTGGTATCCTGAATTTGTCC +
Preference number: 6 (lower is better)
Translates to: SSKTRTLPIAGP*SIGPSGILNLS
Trigger: GGACAAATTCAGGATACCAGAAGGCCCTATTGATCAGGGGCCAGCTATAGGAAGAGTACGCGTTTTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358307.6
ENST00000557164.5
CDS CCA 72 bp TGTTCTTCAACATGCACCATGTACTCTTCAATGGGATaGAAGGCAGCTTCTGTTCCCACTTTGTCTGTGCGT +
Preference number: 6 (lower is better)
Translates to: CSSTCTMYSSMG*KAASVPTLSVR
Trigger: ACGCACAGACAAAGTGGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGGTGCATGTTGAAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS TCA 72 bp ACCTGGGATGAAAAAGTACACACTAGGAAGTCTGCCTaGGAGAGAAAATGTATATCCAGGATCACTCCACGA +
Preference number: 6 (lower is better)
Translates to: TWDEKVHTRKSA*ERKCISRITPR
Trigger: TCGTGGAGTGATCCTGGATATACATTTTCTCTCTCAGGCAGACTTCCTAGTGTGTACTTTTTCATCCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS CCA 72 bp GAAAATGTTCTTCAACATGCACCATGTACTCTTCAATaGGATGGAAGGCAGCTTCTGTTCCCACTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: ENVLQHAPCTLQ*DGRQLLFPLCL
Trigger: CAGACAAAGTGGGAACAGAAGCTGCCTTCCATCCCATTGAAGAGTACATGGTGCATGTTGAAGAACATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS CAA 72 bp TCTGTGCGTCTGACATGGACTCCAATAACTGGATGTTaGAAGCCAAGCTTCTTGGTGGCTTCTTCTATTTCT +
Preference number: 6 (lower is better)
Translates to: SVRLTWTPITGC*KPSFLVASSIS
Trigger: AGAAATAGAAGAAGCCACCAAGAAGCTTGGCTTCAAACATCCAGTTATTGGAGTCCATGTCAGACGCACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
ENST00000674118.1
CDS CAA 72 bp CAGCCTTTGTTGATATTACACACCAGCTTTTTGGCTTaGCTGCAGTCCTTGGGATTACAAAGGTTCTTGGCA +
Preference number: 6 (lower is better)
Translates to: QPLLILHTSFLA*LQSLGLQRFLA
Trigger: TGCCAAGAACCTTTGTAATCCCAAGGACTGCAGCAAAGCCAAAAAGCTGGTGTGTAATATCAACAAAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554765.1
ENST00000557536.5
CDS CAA 90 bp GGAGAGCGAAATGGTGCCCTTAAGACAAGAATCATTTCTCTAGGCTaGGGCATTTTAAAGTACATACCGGGGATACTTATCCCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: GERNGALKTRIISLG*GILKYIPGILIPKQ
Trigger: TTGCTTTGGGATAAGTATCCCCGGTATGTACTTTAAAATGCCCAAGCCTAGAGAAATGATTCTTGTCTTAAGGGCACCATTTCGCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS TCA 72 bp ATAAAGTGGCCATCTGCATTTCTGGGATCCTGCTCCTaGATGATCACTGGGTCAAAAACAAAATCAACATGG +
Preference number: 6 (lower is better)
Translates to: IKWPSAFLGSCS*MITGSKTKSTW
Trigger: CCATGTTGATTTTGTTTTTGACCCAGTGATCATTCAGGAGCAGGATCCCAGAAATGCAGATGGCCACTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554765.1
CDS CAA 72 bp AGGATCACTCCACGAAGTGAATTTTCTGTGTATCGATaGTGCAGTCCAGCTGACCAGGAAATAGAGTTATCA +
Preference number: 6 (lower is better)
Translates to: RITPRSEFSVYR*CSPADQEIELS
Trigger: TGATAACTCTATTTCCTGGTCAGCTGGACTGCACAATCGATACACAGAAAATTCACTTCGTGGAGTGATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS GCA 72 bp ATCACTCCACGAAGTGAATTTTCTGTGTATCGATTGTaGAGTCCAGCTGACCAGGAAATAGAGTTATCACTA +
Preference number: 6 (lower is better)
Translates to: ITPRSEFSVYRL*SPADQEIELSL
Trigger: TAGTGATAACTCTATTTCCTGGTCAGCTGGACTGCACAATCGATACACAGAAAATTCACTTCGTGGAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342677.10
ENST00000358307.6
ENST00000360689.9
ENST00000394586.6
ENST00000557164.5
ENST00000673929.1
CDS TCA 72 bp AGGAACTCTATCACAGATACACAAATAAGGTACTGCTaGTTCAAAAGAAAATCCCTTGTCCTCAAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: RNSITDTQIRYC*FKRKSLVLKQL
Trigger: GAGCTGCTTGAGGACAAGGGATTTTCTTTTGAATCAGCAGTACCTTATTTGTGTATCTGTGATAGAGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS TCA 72 bp AGAGAGAAAATGTATATCCAGGATCACTCCACGAAGTaGATTTTCTGTGTATCGATTGTGCAGTCCAGTTTG +
Preference number: 6 (lower is better)
Translates to: REKMYIQDHSTK*IFCVSIVQSSL
Trigger: CAAACTGGACTGCACAATCGATACACAGAAAATTCACTTCGTGGAGTGATCCTGGATATACATTTTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674118.1
CDS GCA 72 bp TTAAATAAGTTAAGATATCTGTCTCTCAGGATTCGGTaGCATCTCAGTTTTCCAGCGTCGGTATTAGTGTTG +
Preference number: 6 (lower is better)
Translates to: LNKLRYLSLRIR*HLSFPASVLVL
Trigger: CAACACTAATACCGACGCTGGAAAACTGAGATGGCACCGAATCCTGAGAGACAGATATCTTAACTTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554765.1
CDS CAA 72 bp AATGGTGCCCTTAAGACAAGAATCATTTCTCTAGGCTaGGGCATTTTAAAGTACATACCGGGGATACTTATC +
Preference number: 6 (lower is better)
Translates to: NGALKTRIISLG*GILKYIPGILI
Trigger: GATAAGTATCCCCGGTATGTACTTTAAAATGCCCAAGCCTAGAGAAATGATTCTTGTCTTAAGGGCACCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360689.9
ENST00000394586.6
CDS GCA 72 bp TTGATACACAATTGTAGGCTGGTCAATCTGAGAAAGTaGTGCAGGCTCTGGATGTGTTTTTGTAAAATTTCA +
Preference number: 6 (lower is better)
Translates to: LIHNCRLVNLRK*CRLWMCFCKIS
Trigger: TGAAATTTTACAAAAACACATCCAGAGCCTGCAGCACTTTCTCAGATTGACCAGCCTACAATTGTGTATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554765.1
CDS CAA 72 bp CTGTTTCTAGTTAGTGCACAGGTGAATAGACTTCTGTaGTTTCAACACATGATGCTTCAGACAAATTATTCT +
Preference number: 6 (lower is better)
Translates to: LFLVSAQVNRLL*FQHMMLQTNYS
Trigger: AGAATAATTTGTCTGAAGCATCATGTGTTGAAACAACAGAAGTCTATTCACCTGTGCACTAACTAGAAACAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000342677.10
ENST00000360689.9
ENST00000394586.6
ENST00000553924.5
ENST00000554610.1
ENST00000554667.1
ENST00000555559.5
ENST00000556518.5
ENST00000557338.5
ENST00000673929.1
ENST00000674118.1
CDS CCA 72 bp GATTTCTGTACTAAACGTATAAGCAGGACAAAATTCTaGTATAAAAGTGACACACTTTGGTTGTTGGAAATG +
Preference number: 6 (lower is better)
Translates to: DFCTKRISRTKF*YKSDTLWLLEM
Trigger: CATTTCCAACAACCAAAGTGTGTCACTTTTATACCAGAATTTTGTCCTGCTTATACGTTTAGTACAGAAATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360689.9