RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FUT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000176920

Ensembl transcript IDs: ENST00000391876.5, ENST00000425340.3, ENST00000522283.1, ENST00000522966.2

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATaGCCGGGCACTCATCTTGAGGGAGGCAGAGAAGGAGAAAAGGTC +
Preference number: 1 (lower is better)
Translates to: HRREMGPAHGTMCFS*PGTHLEGGREGEKV
Trigger: GACCTTTTCTCCTTCTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
3UTR GCA 90 bp ACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTaGTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGAAGGA +
Preference number: 1 (lower is better)
Translates to: THLHRREMGPAHGTM*FSCPGTHLEGGREG
Trigger: TCCTTCTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
3UTR TCA 90 bp GGGTTTCACTGCCTGACATGTAACACATGTGCTGCAAACATTTACTaGAAGAATGAACGGAACGCCCTGAAGTTCACTGAGCCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: GFHCLTCNTCAANIY*KNERNALKFTEPGW
Trigger: CCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTCATTCTTTCAGTAAATGTTTGCAGCACATGTGTTACATGTCAGGCAGTGAAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR GCA 90 bp ACACCTGGTTTGATGAGTAGACTGTGGGTCTGTTTAAACCCCACTTaGCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAA +
Preference number: 1 (lower is better)
Translates to: TPGLMSRLWVCLNPT*LLNQGTSCSEQPTQ
Trigger: TTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGGGGTTTAAACAGACCCACAGTCTACTCATCAAACCAGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR GCA 90 bp CCAGGATTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCACCTGGCCTCACAAAGTaGGAGCATTACAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: PGLKRQDLWTWMHASYKPPGLTK*EHYRHE
Trigger: CTCATGCCTGTAATGCTCGCACTTTGTGAGGCCAGG...TGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR GCA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATACCATCTTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHTILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATGGT...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR TCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATAGTTTGAGACCAGCCTaGCCTCAAGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: EAGPMDLDACQLQANMAHSLRPA*PQVIHP
Trigger: TGGGTGGATCACTTGAGGTCAGGCTGGTCTCAAACT...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391876.5
3UTR-3UTR TCA 90 bp CGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCTAGAAAGCCAGGATTaGAGAGGCAGGACCTATGGA +
Preference number: 2 (lower is better)
Translates to: RNALKFTEPGWSLSSSNDLESQD*RGRTYG
Trigger: TCCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAG...ATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR TCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTCCTTCAGAGGTGGCTaGTCAACTTCTCAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: EAGPMDLDACQLQANMAHSFRGG*STSQLQ
Trigger: CTGCAGCTGAGAAGTTGATCAGCCACCTCTGAAGGA...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR GCA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATGCTCATGGAACCATGTaGTTCTCATGCCCGGGCACT +
Preference number: 2 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHAHGTM*FSCPGT
Trigger: AGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGC...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR CAA 90 bp CTCTCAGTTCTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATaGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAG +
Preference number: 2 (lower is better)
Translates to: LSVLAMIIPGPRKPG*KRQDLWTWMHASYK
Trigger: CTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAGAACTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR GCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGACCATGTGCTTCTCATaGCCGGGCACTCATCTTGAG +
Preference number: 2 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWTMCFS*PGTHLE
Trigger: CTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGT...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR GCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCCTGGCCTCACAAAGTaGGAGCATTACAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWPGLTK*EHYRHE
Trigger: CTCATGCCTGTAATGCTCGCACTTTGTGAGGCCAGG...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR CCA 90 bp AGGGGACTTCCTGCAGTGAACAACCTACACAACCCCTCAGGGCATCTCTGTTGTTCTGCATGTGATGGCTaGATGTGTAGCAGCCCTTTT +
Preference number: 2 (lower is better)
Translates to: RGLPAVNNLHNPSGHLCCSACDG*MCSSPF
Trigger: AAAAGGGCTGCTACACATCCAGCCATCACATGCAGA...ACAACAGAGATGCCCTGAGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR TCA 90 bp CAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTATGAGGTCAGGAGTTTaGGACCAGCCTGACCTCAAG +
Preference number: 2 (lower is better)
Translates to: QDLWTWMHASYKPIWHICMRSGV*DQPDLK
Trigger: CTTGAGGTCAGGCTGGTCTCAAACTCCTGACCTCAT...ACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391876.5
3UTR-3UTR TCA 90 bp CTAATTTTCTGCAAGCTGCATGTCCTTCAGAGGTGGCTGATCAACTTCTCAGCTGAGGAAGGCGGATCATaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LIFCKLHVLQRWLINFSAEEGGS*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCATGATCCGCCTTCCTC...AGCTGAGAAGTTGATCAGCCACCTCTGAAGGACATGCAGCTTGCAGAAAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR TCA 90 bp ACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAACTAACTAGAAAACAGTaGGCTCTAGGGCCGGGCGCA +
Preference number: 2 (lower is better)
Translates to: TYGLGCMPATSQYGTFVQLTRKQ*ALGPGA
Trigger: TGCGCCCGGCCCTAGAGCTCACTGTTTTCTAGTTAG...TTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR TCA 90 bp CTAATTTTCTGCAAGCTGCATGTCCTTCAGAGGTGGCTGATCAACTTCTCAGCTATGAACGGAACGCCCTaGAGTTCACTGAGCCAGGCT +
Preference number: 2 (lower is better)
Translates to: LIFCKLHVLQRWLINFSAMNGTP*SSLSQA
Trigger: AGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTCAT...AGCTGAGAAGTTGATCAGCCACCTCTGAAGGACATGCAGCTTGCAGAAAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR GCA 90 bp AGGGGACTTCCTGCAGTGAACAACCTACACAACCCCTCAGGGCATCTCTGTTGTATGGACTTGGATGCATaGCAGCTACAAGCCAATATG +
Preference number: 2 (lower is better)
Translates to: RGLPAVNNLHNPSGHLCCMDLDA*QLQANM
Trigger: CATATTGGCTTGTAGCTGGCATGCATCCAAGTCCAT...ACAACAGAGATGCCCTGAGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR CCA 90 bp GGTCTCTCAGTTCTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATTGAAGCAGGACCTATGGACTTaGATGCATGCCAGCTACAAG +
Preference number: 2 (lower is better)
Translates to: GLSVLAMIIPGPRKPGLKQDLWT*MHASYK
Trigger: CTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG...CTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAGAACTGAGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR GCA 90 bp ACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAACCATGTGCTTCTCATaGCCGGGCACTCATCTTGAG +
Preference number: 2 (lower is better)
Translates to: TYGLGCMPATSQYGTFVQTMCFS*PGTHLE
Trigger: CTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGT...TTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR GCA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATAAGAGAGATGGGTCCTaGTCATGGAACCATGTGCTT +
Preference number: 2 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHKRDGS*SWNHVL
Trigger: AAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR GCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATATGGACTTGGATGCATaGCAGCTACAAGCCAATATG +
Preference number: 2 (lower is better)
Translates to: EAGPMDLDACQLQANMAHMDLDA*QLQANM
Trigger: CATATTGGCTTGTAGCTGGCATGCATCCAAGTCCAT...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR-3UTR GCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCAATATGGCACATTTGTaGAAACTGGAAAAAGGCTCC +
Preference number: 2 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPNMAHL*KLEKGS
Trigger: GGAGCCTTTTTCCAGTTTGCACAAATGTGCCATATT...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR GCA 90 bp TGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAACTGGAAAAAGGCTCAAGAGAGATGGGTCCTaGTCATGGAACCATGTGCTT +
Preference number: 2 (lower is better)
Translates to: CMPATSQYGTFVQTGKRLKRDGS*SWNHVL
Trigger: AAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT...GAGCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR CAA 90 bp GCTGCAGAATCTGAGGCTAAACTAATCCCAGAAGTCTCATTTCTTTaGCCTCCTATCGGGTCACATGGGTATGTGACAATTCCTACCCAT +
Preference number: 2 (lower is better)
Translates to: AAESEAKLIPEVSFL*PPIGSHGYVTIPTH
Trigger: ATGGGTAGGAATTGTCACATACCCATGTGACCCGATAGGAGGCAAAAGAAATGAGACTTCTGGGATTAGTTTAGCCTCAGATTCTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR-3UTR GCA 90 bp TGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAACTGGAAAAAGGCTCAATATGGCACATTTGTaGAAACTGGAAAAAGGCTCC +
Preference number: 2 (lower is better)
Translates to: CMPATSQYGTFVQTGKRLNMAHL*KLEKGS
Trigger: GGAGCCTTTTTCCAGTTTGCACAAATGTGCCATATT...GAGCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR GCA 72 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTaGTTCTCATGCCCGGGCACTCATCTTGAGGGAGGC +
Preference number: 3 (lower is better)
Translates to: HRREMGPAHGTM*FSCPGTHLEGG
Trigger: GCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
3UTR GCA 72 bp CAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTaGTCATGGAACCATGTGCTTCTCATGCCCGGGCAC +
Preference number: 3 (lower is better)
Translates to: QPNASSQKRDGS*SWNHVLLMPGH
Trigger: GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
3UTR CCA 72 bp AATGAACGGAACGCCCTGAAGTTCACTGAGCCAGGCTaGTCTCTCAGTTCTAGCAATGATCATCCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: NERNALKFTEPG*SLSSSNDHPRP
Trigger: GGGCCTGGGATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR CCA 72 bp GGCCCTAGAAAGCCAGGATTGAAGAGGCAGGACCTATaGACTTGGATGCATGCCAGCTACAAGCCAATATGG +
Preference number: 3 (lower is better)
Translates to: GPRKPGLKRQDL*TWMHASYKPIW
Trigger: CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
3UTR CCA 72 bp TCAGGGTATCACTACGTCGTCCAGGCCGCAGTGCAGTaGCTATTCGCAAGTCCAATCACGGTGCACTATATT +
Preference number: 3 (lower is better)
Translates to: SGYHYVVQAAVQ*LFASPITVHYI
Trigger: AATATAGTGCACCGTGATTGGACTTGCGAATAGCCACTGCACTGCGGCCTGGACGACGTAGTGATACCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR CCA 72 bp TTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATaGGTCCTGCTCATGGAACCATGTGCTTCTCATGCC +
Preference number: 3 (lower is better)
Translates to: LLAAQRIFTEER*VLLMEPCASHA
Trigger: GGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
3UTR-3UTR CAA 90 bp CTAATTTTCTGCAAGCTGCATGTCCTTCAGAGGTGGCTGATCAACTTCTCAGCTCCTAGAAAGCCAGGATaGAAGAGGCAGGACCTATGG +
Preference number: 3 (lower is better)
Translates to: LIFCKLHVLQRWLINFSAPRKPG*KRQDLW
Trigger: CCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAGG...AGCTGAGAAGTTGATCAGCCACCTCTGAAGGACATGCAGCTTGCAGAAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR CCA 72 bp TCACATGGGTATGTGACAATTCCTACCCATCGGAGTTaGGGGGAAATTGCTGGAAGGCTTAGGAAGGTTTCA +
Preference number: 3 (lower is better)
Translates to: SHGYVTIPTHRS*GEIAGRLRKVS
Trigger: TGAAACCTTCCTAAGCCTTCCAGCAATTTCCCCCCAACTCCGATGGGTAGGAATTGTCACATACCCATGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR GCA 72 bp AGGATTGAAGAGGCAGGACCTATGGACTTGGATGCATaGCAGCTACAAGCCAATATGGCACATTTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: RIEEAGPMDLDA*QLQANMAHLCK
Trigger: TTTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACAGCAGGGGTAGCCGGTaGAGCGGACGTACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHSRGSR*SGRTPP
Trigger: CGGGGGAGTACGTCCGCTTCACCGGCTACCCCTGCT...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp GAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCAGCAGGGGTAGCCGGTaGAGCGGACGTACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: EERWVLLMEPCASHARALSRGSR*SGRTPP
Trigger: CGGGGGAGTACGTCCGCTTCACCGGCTACCCCTGCT...GAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCGTCCACATCCCCCTaGGCTGGCTGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHSSTSP*AGWVPV
Trigger: CACTGGGACCCAGCCAGCTCAGGGGGATGTGGACGA...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACCGGCTCCCGTTCACCTaGAGGCCCCGCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHRLPFT*RPRRNF
Trigger: GAAGTTCCTGCGGGGCCTGCAGGTGAACGGGAGCCG...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp GAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCGGACCCCTACAAAGGTaGCCGGCCGGCTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: EERWVLLMEPCASHARALGPLQR*PAGSRS
Trigger: TGAACGGGAGCCGGCCGGGCACCTTTGTAGGGGTCC...GAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp AAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCGTCCACATCCCCCTaGGCTGGCTGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: KRDGSCSWNHVLLMPGHSSSTSP*AGWVPV
Trigger: CACTGGGACCCAGCCAGCTCAGGGGGATGTGGACGA...TGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp GGGACTTCCTGCAGTGAACAACCTACACAACCCCTCAGGGCATCTCTGTTGTCTAGCAGGGGTAGCCGGTaGAGCGGACGTACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GTSCSEQPTQPLRASLLSSRGSR*SGRTPP
Trigger: CGGGGGAGTACGTCCGCTTCACCGGCTACCCCTGCT...AGACAACAGAGATGCCCTGAGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCATGGTGTCTCCGCCCGTaGGGTATGCGGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: TEERWVLLMEPCASHARAWCLRP*GMRPRS
Trigger: GGATCTGGGCCGCATACCTCACGGGCGGAGACACCA...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATTGGTGTCTCCGCCCGTaGGGTATGCGGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHWCLRP*GMRPRS
Trigger: GGATCTGGGCCGCATACCTCACGGGCGGAGACACCA...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACGGCTCCCGTTCACCTaGAGGCCCCGCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: TEERWVLLMEPCASHARARLPFT*RPRRNF
Trigger: GAAGTTCCTGCGGGGCCTGCAGGTGAACGGGAGCCG...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCTCCGCCCGTGAGGTATaGGGCCCAGATCCCGAACGT +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGSAREV*GPDPER
Trigger: ACGTTCGGGATCTGGGCCGCATACCTCACGGGCGGA...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCCGCCCGTGAGGTATaGGGCCCAGATCCCGAACGT +
Preference number: 4 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHSAREV*GPDPER
Trigger: ACGTTCGGGATCTGGGCCGCATACCTCACGGGCGGA...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp GGGACTTCCTGCAGTGAACAACCTACACAACCCCTCAGGGCATCTCTGTTGTCTTCGTCCACATCCCCCTaGGCTGGCTGGGTCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GTSCSEQPTQPLRASLLSSSTSP*AGWVPV
Trigger: CACTGGGACCCAGCCAGCTCAGGGGGATGTGGACGA...AGACAACAGAGATGCCCTGAGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCCGCCCTGAAGTTCACTaGGCCAGGCTGGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALIRPEVH*ARLVSQ
Trigger: CTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCG...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTCCCCTCGGCGAACATaGACCCCTACAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALISPRRT*TPTKVP
Trigger: GGGCACCTTTGTAGGGGTCCATGTTCGCCGAGGGGA...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGCCGGGACAGAGTGGTTaGGCAGGCACCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEPGQSG*AGTSVF
Trigger: GAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGG...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp GAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCGAGGGAAGGCTGCTGTaGGGGGTTTCACTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: EERWVLLMEPCASHARALEGRLL*GVSLPD
Trigger: GTCAGGCAGTGAAACCCCCCACAGCAGCCTTCCCTC...GAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCCATGGCTGGTCCTGCTaGAGGAAACCGGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGHGWSC*RKPGQS
Trigger: ACTCTGTCCCGGTTTCCTTCAGCAGGACCAGCCATG...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000522966.2
CDS-3UTR TCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCGCCCTGAAGTTCACTaGGCCAGGCTGGTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHRPEVH*ARLVSQ
Trigger: CTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCG...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGCCCCAGGCGGCCTATTaGATTGATCGTCCACATCCC +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEPQAAY*IDRPHP
Trigger: GGGATGTGGACGATCAATGCAATAGGCCGCCTGGGG...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTGGGAGGCGGAGGCTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: TEERWVLLMEPCASHARALGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAGCCTCCGCCTCCCAG...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCCGGGACAGAGTGGTTaGGCAGGCACCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHPGQSG*AGTSVF
Trigger: GAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGG...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCGAAACCGGGACAGAGTaGTTGGGCAGGCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGETGTE*LGRHLS
Trigger: ACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTC...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGAACTCCCACATGGCTTaGATCTTCGCTAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAENSHMA*IFASRC
Trigger: GCAGCGGCTAGCGAAGATTCAAGCCATGTGGGAGTT...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp GGTCTCTCAGTTCTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATTGAAGTGGTGTCTCCGCCCGTaGGGTATGCGGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: GLSVLAMIIPGPRKPGLKWCLRP*GMRPRS
Trigger: GGATCTGGGCCGCATACCTCACGGGCGGAGACACCA...CTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAGAACTGAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp GGTCTCTCAGTTCTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATTGAAGCGGCTCCCGTTCACCTaGAGGCCCCGCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: GLSVLAMIIPGPRKPGLKRLPFT*RPRRNF
Trigger: GAAGTTCCTGCGGGGCCTGCAGGTGAACGGGAGCCG...CTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAGAACTGAGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp GGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGGACCCCTACAAAGGTaGCCGGCCGGCTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: GRTYGLGCMPATSQYGTFGPLQR*PAGSRS
Trigger: TGAACGGGAGCCGGCCGGGCACCTTTGTAGGGGTCC...AAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCCAGGTGAGCCCTCAATaGCATCGCCAGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALIQVSPQ*HRQQTP
Trigger: TGGTGTTTGCTGGCGATGGCATTGAGGGCTCACCTG...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGGCTCATGGAACCATGTaGTTCTCATGCCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEAHGTM*FSCPGT
Trigger: AGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGC...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCTCCCCTCGGCGAACATaGACCCCTACAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPSPRRT*TPTKVP
Trigger: GGGCACCTTTGTAGGGGTCCATGTTCGCCGAGGGGA...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCCGGGGAGGGTGTAATTaGCCAGGTAGATGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGRGGCN*PGRWCL
Trigger: GAGACACCATCTACCTGGCCAATTACACCCTCCCCG...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCCCTCAGTGTTCCCTCTaGGTCTCTCTTCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALIPQCSL*VSLHSG
Trigger: CCCTGAGTGAAGAGAGACCCAGAGGGAACACTGAGG...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCCCTACCCATCGGAGTTaGGGGGAAATTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALIPTHRS*GEIAGR
Trigger: CCTTCCAGCAATTTCCCCCCAACTCCGATGGGTAGG...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp GAACGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATCATGGCTGGTCCTGCTaGAGGAAACCGGGACAGAGT +
Preference number: 4 (lower is better)
Translates to: ERNALKFTEPGWSLSSSNHGWSC*RKPGQS
Trigger: ACTCTGTCCCGGTTTCCTTCAGCAGGACCAGCCATG...ATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391876.5
CDS-3UTR TCA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCAAACTCCCACATGGCTTaGATCTTCGCTAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TEERWVLLMEPCASHARANSHMA*IFASRC
Trigger: GCAGCGGCTAGCGAAGATTCAAGCCATGTGGGAGTT...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGAAAATCTTTGGCAGGTaGGCCCTCAATGCCATCGCC +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEKIFGR*ALNAIA
Trigger: GGCGATGGCATTGAGGGCTCACCTGCCAAAGATTTT...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCAAAATCTTTGGCAGGTaGGCCCTCAATGCCATCGCC +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALIKIFGR*ALNAIA
Trigger: GGCGATGGCATTGAGGGCTCACCTGCCAAAGATTTT...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCAGCCAGCATTAGTGCTTaGGTAAGGGGGACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TEERWVLLMEPCASHARAASISA*VRGTGL
Trigger: CAGACCTGTCCCCCTTACTCAAGCACTAATGCTGGC...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGAGTTTGAGACCAGCCTaGCCTCAAGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAESLRPA*PQVIHP
Trigger: TGGGTGGATCACTTGAGGTCAGGCTGGTCTCAAACT...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391876.5
CDS-3UTR TCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCATGAGGTCAGGAGTTTaGGACCAGCCTGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGMRSGV*DQPDLK
Trigger: CTTGAGGTCAGGCTGGTCTCAAACTCCTGACCTCAT...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391876.5
CDS-3UTR TCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATGAGGAAGGCGGATCATaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHEEGGS*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCATGATCCGCCTTCCTC...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp GAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCTCCTTCAGAGGTGGCTaGTCAACTTCTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EERWVLLMEPCASHARALSFRGG*STSQLQ
Trigger: CTGCAGCTGAGAAGTTGATCAGCCACCTCTGAAGGA...GAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATAGGCGGAGGCTGCAGTaGGCCAAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: EAGPMDLDACQLQANMAHRRRLQ*AKIMPL
Trigger: CAGTGGCATGATCTTGGCTCACTGCAGCCTCCGCCT...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR GCA 90 bp GAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCGCTAGCACTGGTATCTaGACCGGTAACTCCCACATG +
Preference number: 4 (lower is better)
Translates to: EERWVLLMEPCASHARALASTGI*TGNSHM
Trigger: CATGTGGGAGTTACCGGTGCAGATACCAGTGCTAGC...GAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGACCATGTGCTTCTCATaGCCGGGCACTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAETMCFS*PGTHLE
Trigger: CTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGT...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCCCTGGCCTCACAAAGTaGGAGCATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALIPGLTK*EHYRHE
Trigger: CTCATGCCTGTAATGCTCGCACTTTGTGAGGCCAGG...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGCCTGGCCTCACAAAGTaGGAGCATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEPGLTK*EHYRHE
Trigger: CTCATGCCTGTAATGCTCGCACTTTGTGAGGCCAGG...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp AGGGGACTTCCTGCAGTGAACAACCTACACAACCCCTCAGGGCATCTCTGTTGTACCATCTTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RGLPAVNNLHNPSGHLCCTILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAAGATGGT...ACAACAGAGATGCCCTGAGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCTCTGAACGACCAGCATaGCTGGTCCTGCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGSERPA*LVLLKE
Trigger: TTCCTTCAGCAGGACCAGCCATGCTGGTCGTTCAGA...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000522966.2
CDS-3UTR CCA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACCCGGTAACTCCCACATaGCTTGAATCTTCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHPVTPT*LESSLA
Trigger: GGCTAGCGAAGATTCAAGCCATGTGGGAGTTACCGG...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGCACATCCCCCTGAGCTaGCTGGGTCCCAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMHIPLS*LGPSAF
Trigger: AAAGGCACTGGGACCCAGCCAGCTCAGGGGGATGTG...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCGGGGAGGGTGTAATTaGCCAGGTAGATGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHRGGCN*PGRWCL
Trigger: GAGACACCATCTACCTGGCCAATTACACCCTCCCCG...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp CCAGGATTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCACTAACTAGAAAACAGTaGGCTCTAGGGCCGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PGLKRQDLWTWMHASYKPLTRKQ*ALGPGA
Trigger: TGCGCCCGGCCCTAGAGCTCACTGTTTTCTAGTTAG...TGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGCTAGAAAGCCAGGATTaGAGAGGCAGGACCTATGGA +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAELESQD*RGRTYG
Trigger: TCCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAG...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp CGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATATGAACGGAACGCCCTaGAGTTCACTGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RNALKFTEPGWSLSSSNDMNGTP*SSLSQA
Trigger: AGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTCAT...ATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp AAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCAGCTAGCACTGGTATCTaGACCGGTAACTCCCACATG +
Preference number: 4 (lower is better)
Translates to: KRDGSCSWNHVLLMPGHSASTGI*TGNSHM
Trigger: CATGTGGGAGTTACCGGTGCAGATACCAGTGCTAGC...TGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp AAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCAACCATGTGCTTCTCATaGCCGGGCACTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: KRDGSCSWNHVLLMPGHSTMCFS*PGTHLE
Trigger: CTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGT...TGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp AAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCACCGGTAACTCCCACATaGCTTGAATCTTCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: KRDGSCSWNHVLLMPGHSPVTPT*LESSLA
Trigger: GGCTAGCGAAGATTCAAGCCATGTGGGAGTTACCGG...TGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp GAACGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATCGGGGAGGGTGTAATTaGCCAGGTAGATGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ERNALKFTEPGWSLSSSNRGGCN*PGRWCL
Trigger: GAGACACCATCTACCTGGCCAATTACACCCTCCCCG...ATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCCAGGACCTATGGACTTaGATGCATGCCAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: ERWVLLMEPCASHARALIQDLWT*MHASYK
Trigger: CTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATAAGAGGCAGGACCTATaGACTTGGATGCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHKRQDL*TWMHAS
Trigger: GCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTT...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCCAGGCCGCAGTGCAGTaGCTATTCGCAAGTCCAATC +
Preference number: 4 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPQAAVQ*LFASPI
Trigger: GATTGGACTTGCGAATAGCCACTGCACTGCGGCCTG...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGGCCAGCATTAGTGCTTaGGTAAGGGGGACAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMASISA*VRGTGL
Trigger: CAGACCTGTCCCCCTTACTCAAGCACTAATGCTGGC...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGCAGGTGAGCCCTCAATaGCATCGCCAGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMQVSPQ*HRQQTP
Trigger: TGGTGTTTGCTGGCGATGGCATTGAGGGCTCACCTG...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGAAGAGAGATGGGTCCTaGTCATGGAACCATGTGCTT +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEKRDGS*SWNHVL
Trigger: AAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTCACATCCCCCTGAGCTaGCTGGGTCCCAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QDLWTWMHASYKPIWHICHIPLS*LGPSAF
Trigger: AAAGGCACTGGGACCCAGCCAGCTCAGGGGGATGTG...ACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGCCCCTTCCACACTTTTaGCATGACATGGACATAGTC +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEPLPHF*HDMDIV
Trigger: GACTATGTCCATGTCATGCCAAAAGTGTGGAAGGGG...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp AAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCAAACACCACATCACCGTaGGAGGTGTCAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KRDGSCSWNHVLLMPGHSNTTSP*EVSMFS
Trigger: GGAGAACATTGACACCTCCCACGGTGATGTGGTGTT...TGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp GAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCGTAGAGCAAAATCTTTaGCAGGTGAGCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: EERWVLLMEPCASHARALVEQNL*QVSPQC
Trigger: GCATTGAGGGCTCACCTGCCAAAGATTTTGCTCTAC...GAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATGATGGGTCCTGCTCATaGAACCATGTGCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHDGSCS*NHVLLM
Trigger: CATGAGAAGCACATGGTTCCATGAGCAGGACCCATC...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGTTCACAGAAGAGAGATaGGTCCTGCTCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAEFTEER*VLLMEP
Trigger: TGGTTCCATGAGCAGGACCCATCTCTCTTCTGTGAA...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCAAGAGGCAGGACCTATaGACTTGGATGCATGCCAGC +
Preference number: 4 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPKRQDL*TWMHAS
Trigger: GCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTT...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCTCTGAACGACCAGCATaGCTTCTCTCACCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPSERPA*LLSPGP
Trigger: AGGACCAGGTGAGAGAAGCCATGCTGGTCGTTCAGA...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR CAA 72 bp CTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATaGAAGAGGCAGGACCTATGGACTTGGATGCATGCC +
Preference number: 4 (lower is better)
Translates to: LAMIIPGPRKPG*KRQDLWTWMHA
Trigger: GGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp GGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTAACTCCCACATGGCTTaGATCTTCGCTAGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GRTYGLGCMPATSQYGTFNSHMA*IFASRC
Trigger: GCAGCGGCTAGCGAAGATTCAAGCCATGTGGGAGTT...AAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCTCCACACTTTTGGCATaGCATGGACATAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPSTLLA*HGHSPL
Trigger: GAGGGGACTATGTCCATGTCATGCCAAAAGTGTGGA...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGAAAATCTTTGGCAGGTaGGCCCTCAATGCCATCGCC +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMKIFGR*ALNAIA
Trigger: GGCGATGGCATTGAGGGCTCACCTGCCAAAGATTTT...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATGAGGAAGGCGGATCATaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHEEGGS*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCATGATCCGCCTTCCTC...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp GGTCTCTCAGTTCTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATTGAAGATGAACGGAACGCCCTaGAGTTCACTGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLSVLAMIIPGPRKPGLKMNGTP*SSLSQA
Trigger: AGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTCAT...CTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAGAACTGAGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGGCTAGCACTGGTATCTaGACCGGTAACTCCCACATG +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMASTGI*TGNSHM
Trigger: CATGTGGGAGTTACCGGTGCAGATACCAGTGCTAGC...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR GCA 90 bp CAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTCCCCAGGCGGCCTATTaGATTGATCGTCCACATCCC +
Preference number: 4 (lower is better)
Translates to: QDLWTWMHASYKPIWHICPQAAY*IDRPHP
Trigger: GGGATGTGGACGATCAATGCAATAGGCCGCCTGGGG...ACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATCAGGTGAGCCCTCAATaGCATCGCCAGCAAACACCA +
Preference number: 4 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHQVSPQ*HRQQTP
Trigger: TGGTGTTTGCTGGCGATGGCATTGAGGGCTCACCTG...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGGCTCATGGAACCATGTaGTTCTCATGCCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWAHGTM*FSCPGT
Trigger: AGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGC...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATCCTGGCCTCACAAAGTaGGAGCATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: EAGPMDLDACQLQANMAHPGLTK*EHYRHE
Trigger: CTCATGCCTGTAATGCTCGCACTTTGTGAGGCCAGG...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACAAAGAGGATGAAGTaGGCCATGGGAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGTKRMK*AMGKEK
Trigger: TTTCTCCTTTCCCATGGCCCACTTCATCCTCTTTGT...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATCCGGTAACTCCCACATaGCTTGAATCTTCGCTAGCC +
Preference number: 4 (lower is better)
Translates to: EAGPMDLDACQLQANMAHPVTPT*LESSLA
Trigger: GGCTAGCGAAGATTCAAGCCATGTGGGAGTTACCGG...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp ACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAATCCCCTCGGCGAACATaGACCCCTACAAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: TYGLGCMPATSQYGTFVQSPRRT*TPTKVP
Trigger: GGGCACCTTTGTAGGGGTCCATGTTCGCCGAGGGGA...TTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCAGTAGAGCAAAATCTTTaGCAGGTGAGCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: TEERWVLLMEPCASHARAVEQNL*QVSPQC
Trigger: GCATTGAGGGCTCACCTGCCAAAGATTTTGCTCTAC...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCCTCAGTGTTCCCTCTaGGTCTCTCTTCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWPQCSL*VSLHSG
Trigger: CCCTGAGTGAAGAGAGACCCAGAGGGAACACTGAGG...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGTCCACACTTTTGGCATaGCATGGACATAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMSTLLA*HGHSPL
Trigger: GAGGGGACTATGTCCATGTCATGCCAAAAGTGTGGA...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTGTGGTTACACTGTGTaGGTAGAGCAAAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHCGYTV*VEQNLW
Trigger: CCAAAGATTTTGCTCTACTCACACAGTGTAACCACA...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGTGTGGTTACACTGTGTaGGTAGAGCAAAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: LMEPCASHARALILREAECGYTV*VEQNLW
Trigger: CCAAAGATTTTGCTCTACTCACACAGTGTAACCACA...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATCTAGAAAGCCAGGATTaGAGAGGCAGGACCTATGGA +
Preference number: 4 (lower is better)
Translates to: EAGPMDLDACQLQANMAHLESQD*RGRTYG
Trigger: TCCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAG...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp AAGGTTTCATTCATTCTTCAAAAGGGACCAAGACAAGAACGAGCCTCTTTCTGCTCCGCCCGTGAGGTATaGGGCCCAGATCCCGAACGT +
Preference number: 4 (lower is better)
Translates to: KVSFILQKGPRQERASFCSAREV*GPDPER
Trigger: ACGTTCGGGATCTGGGCCGCATACCTCACGGGCGGA...GCAGAAAGAGGCTCGTTCTTGTCTTGGTCCCTTTTGAAGAATGAATGAAACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR GCA 90 bp CAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCTCATGGAACCATGTaGTTCTCATGCCCGGGCACT +
Preference number: 4 (lower is better)
Translates to: QDLWTWMHASYKPIWHICAHGTM*FSCPGT
Trigger: AGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGC...ACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCAAGAGAGATGGGTCCTaGTCATGGAACCATGTGCTT +
Preference number: 4 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPKRDGS*SWNHVL
Trigger: AAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR GCA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATATGGACTTGGATGCATaGCAGCTACAAGCCAATATG +
Preference number: 4 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHMDLDA*QLQANM
Trigger: CATATTGGCTTGTAGCTGGCATGCATCCAAGTCCAT...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGTCTGAACGACCAGCATaGCTGGTCCTGCTGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWSERPA*LVLLKE
Trigger: TTCCTTCAGCAGGACCAGCCATGCTGGTCGTTCAGA...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391876.5
CDS-3UTR CCA 90 bp GAACGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGTAGAGCAAAATCTTTaGCAGGTGAGCCCTCAATGC +
Preference number: 4 (lower is better)
Translates to: ERNALKFTEPGWSLSSSNVEQNL*QVSPQC
Trigger: GCATTGAGGGCTCACCTGCCAAAGATTTTGCTCTAC...ATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGGATGGGTCCTGCTCATaGAACCATGTGCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMDGSCS*NHVLLM
Trigger: CATGAGAAGCACATGGTTCCATGAGCAGGACCCATC...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CCA 90 bp CGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATTTCACAGAAGAGAGATaGGTCCTGCTCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: RNALKFTEPGWSLSSSNDFTEER*VLLMEP
Trigger: TGGTTCCATGAGCAGGACCCATCTCTCTTCTGTGAA...ATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATCAGGACCTATGGACTTaGATGCATGCCAGCTACAAG +
Preference number: 4 (lower is better)
Translates to: EAGPMDLDACQLQANMAHQDLWT*MHASYK
Trigger: CTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CTAATTTTCTGCAAGCTGCATGTCCTTCAGAGGTGGCTGATCAACTTCTCAGCTGAAACCGGGACAGAGTaGTTGGGCAGGCACCTCAGT +
Preference number: 4 (lower is better)
Translates to: LIFCKLHVLQRWLINFSAETGTE*LGRHLS
Trigger: ACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTC...AGCTGAGAAGTTGATCAGCCACCTCTGAAGGACATGCAGCTTGCAGAAAATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATTCCACACTTTTGGCATaGCATGGACATAGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHSTLLA*HGHSPL
Trigger: GAGGGGACTATGTCCATGTCATGCCAAAAGTGTGGA...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp ACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAGGGGACTTCCTGCAGTaGACAACCTACACAACCCCT +
Preference number: 4 (lower is better)
Translates to: TYGLGCMPATSQYGTFVQGDFLQ*TTYTTP
Trigger: AGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCC...TTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR GCA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCAATATGGCACATTTGTaGAAACTGGAAAAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGNMAHL*KLEKGS
Trigger: GGAGCCTTTTTCCAGTTTGCACAAATGTGCCATATT...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp CGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATATGGACTTGGATGCATaGCAGCTACAAGCCAATATG +
Preference number: 4 (lower is better)
Translates to: RNALKFTEPGWSLSSSNDMDLDA*QLQANM
Trigger: CATATTGGCTTGTAGCTGGCATGCATCCAAGTCCAT...ATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp CCACTTGCCTTCTTAACCAGGGGACTTCCTGCAGTGAACAACCTACACAACCCCACCACCCTAATTTTCTaGAAGCTGCATGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PLAFLTRGLPAVNNLHNPTTLIF*KLHVLQ
Trigger: CTGAAGGACATGCAGCTTGCAGAAAATTAGGGTGGT...GGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTTAAGAAGGCAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp GGGACTTCCTGCAGTGAACAACCTACACAACCCCTCAGGGCATCTCTGTTGTCTACAAAGAGGATGAAGTaGGCCATGGGAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GTSCSEQPTQPLRASLLSTKRMK*AMGKEK
Trigger: TTTCTCCTTTCCCATGGCCCACTTCATCCTCTTTGT...AGACAACAGAGATGCCCTGAGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp GAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATCCCCTTCCACACTTTTaGCATGACATGGACATAGTC +
Preference number: 4 (lower is better)
Translates to: EAGPMDLDACQLQANMAHPLPHF*HDMDIV
Trigger: GACTATGTCCATGTCATGCCAAAAGTGTGGAAGGGG...ATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGAACACCACATCACCGTaGGAGGTGTCAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWNTTSP*EVSMFS
Trigger: GGAGAACATTGACACCTCCCACGGTGATGTGGTGTT...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp GGTCTCTCAGTTCTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATTGAAGAACACCACATCACCGTaGGAGGTGTCAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLSVLAMIIPGPRKPGLKNTTSP*EVSMFS
Trigger: GGAGAACATTGACACCTCCCACGGTGATGTGGTGTT...CTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAGAACTGAGAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATATATTCCCTAACTCCTaGCATCAAGCAATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RNALKFTEPGWSLSSSNDIFPNS*HQAILP
Trigger: TGGGAGGATTGCTTGATGCCAGGAGTTAGGGAATAT...ATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp CTAATTTTCTGCAAGCTGCATGTCCTTCAGAGGTGGCTGATCAACTTCTCAGCTTGGATGGAGCTCAGGTaGCTGATGACTTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: LIFCKLHVLQRWLINFSAWMELR*LMTLWS
Trigger: GCTCCACAAAGTCATCAGTCACCTGAGCTCCATCCA...AGCTGAGAAGTTGATCAGCCACCTCTGAAGGACATGCAGCTTGCAGAAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR GCA 90 bp TGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAACTGGAAAAAGGCTCACCATGTGCTTCTCATaGCCGGGCACTCATCTTGAG +
Preference number: 4 (lower is better)
Translates to: CMPATSQYGTFVQTGKRLTMCFS*PGTHLE
Trigger: CTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGT...GAGCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGAAGAGAGATGGGTCCTaGTCATGGAACCATGTGCTT +
Preference number: 4 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWKRDGS*SWNHVL
Trigger: AAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CTGTTACTTGCAGCCCAACGCATCTTCACAGAAGAGAGATGGGTCCTGCTCATGACAAAGAGGATGAAGTaGGCCATGGGAAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LLLAAQRIFTEERWVLLMTKRMK*AMGKEK
Trigger: TTTCTCCTTTCCCATGGCCCACTTCATCCTCTTTGT...CATGAGCAGGACCCATCTCTCTTCTGTGAAGATGCGTTGGGCTGCAAGTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR TCA 90 bp TGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAACTGGAAAAAGGCTCTACAAATGTATCCTCTaGGAGGGAAGGCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: CMPATSQYGTFVQTGKRLYKCIL*EGRLLW
Trigger: CCACAGCAGCCTTCCCTCTCAGAGGATACATTTGTA...GAGCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp ATACAGCTAAGAAATGGTAGCACAGCATGTGAAGATGGATGGAGCTCAGGTGACGATGGGTCCTGCTCATaGAACCATGTGCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: IQLRNGSTACEDGWSSGDDGSCS*NHVLLM
Trigger: CATGAGAAGCACATGGTTCCATGAGCAGGACCCATC...GTCACCTGAGCTCCATCCATCTTCACATGCTGTGCTACCATTTCTTAGCTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp CAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTTTCACTGAGCCAGGCTaGTCTCTCAGTTCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: QDLWTWMHASYKPIWHICFTEPG*SLSSSN
Trigger: ATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAA...ACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR TCA 90 bp TTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGTGTGGTTACACTGTGTaGGTAGAGCAAAATCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKRQDLWTWMHASYKPIWCGYTV*VEQNLW
Trigger: CCAAAGATTTTGCTCTACTCACACAGTGTAACCACA...CCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR GCA 90 bp ACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAAACCAGGGGACTTCCTaGAGTGAACAACCTACACAA +
Preference number: 4 (lower is better)
Translates to: TYGLGCMPATSQYGTFVQNQGTS*SEQPTQ
Trigger: TTGTGTAGGTTGTTCACTGCAGGAAGTCCCCTGGTT...TTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp TGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAACTGGAAAAAGGCTCCCCCTTCCACACTTTTaGCATGACATGGACATAGTC +
Preference number: 4 (lower is better)
Translates to: CMPATSQYGTFVQTGKRLPLPHF*HDMDIV
Trigger: GACTATGTCCATGTCATGCCAAAAGTGTGGAAGGGG...GAGCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp ATACAGCTAAGAAATGGTAGCACAGCATGTGAAGATGGATGGAGCTCAGGTGACTTCACAGAAGAGAGATaGGTCCTGCTCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: IQLRNGSTACEDGWSSGDFTEER*VLLMEP
Trigger: TGGTTCCATGAGCAGGACCCATCTCTCTTCTGTGAA...GTCACCTGAGCTCCATCCATCTTCACATGCTGTGCTACCATTTCTTAGCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp CAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTCATTTACTGAAAGAATaGACGGAACGCCCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: QDLWTWMHASYKPIWHICHLLKE*TERPEV
Trigger: AACTTCAGGGCGTTCCGTTCATTCTTTCAGTAAATG...ACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR GCA 90 bp GGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTAATATGGCACATTTGTaGAAACTGGAAAAAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GRTYGLGCMPATSQYGTFNMAHL*KLEKGS
Trigger: GGAGCCTTTTTCCAGTTTGCACAAATGTGCCATATT...AAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp ACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAAGCTACAAGCCAATATaGCACATTTGTGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: TYGLGCMPATSQYGTFVQSYKPI*HICANW
Trigger: CCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCT...TTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CCA 90 bp CTAATTTTCTGCAAGCTGCATGTCCTTCAGAGGTGGCTGATCAACTTCTCAGCTAGCTACAAGCCAATATaGCACATTTGTGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: LIFCKLHVLQRWLINFSASYKPI*HICANW
Trigger: CCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCT...AGCTGAGAAGTTGATCAGCCACCTCTGAAGGACATGCAGCTTGCAGAAAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CCA 90 bp AAGGTTTCATTCATTCTTCAAAAGGGACCAAGACAAGAACGAGCCTCTTTCTGCTTCACTGAGCCAGGCTaGTCTCTCAGTTCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: KVSFILQKGPRQERASFCFTEPG*SLSSSN
Trigger: ATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAA...GCAGAAAGAGGCTCGTTCTTGTCTTGGTCCCTTTTGAAGAATGAATGAAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR TCA 90 bp GAGCCTCTTTCTGCTGTTTTTGAAAGGAATTATCTGCATGTGATGGCTGGATGTGCTGCAAACATTTACTaGAAGAATGAACGGAACGCC +
Preference number: 4 (lower is better)
Translates to: EPLSAVFERNYLHVMAGCAANIY*KNERNA
Trigger: GGCGTTCCGTTCATTCTTTCAGTAAATGTTTGCAGC...ACATCCAGCCATCACATGCAGATAATTCCTTTCAAAAACAGCAGAAAGAGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425340.3
3UTR CAA 72 bp TCTGAGGCTAAACTAATCCCAGAAGTCTCATTTCTTTaGCCTCCTATCGGGTCACATGGGTATGTGACAATT +
Preference number: 4 (lower is better)
Translates to: SEAKLIPEVSFL*PPIGSHGYVTI
Trigger: AATTGTCACATACCCATGTGACCCGATAGGAGGCAAAAGAAATGAGACTTCTGGGATTAGTTTAGCCTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS TCA 90 bp GGAGGGACGGAGCCGCCCTCCCTGGGCGACGGCAGGGCTCGGAGGTaGGACCAGCAGTTTGGGTTCCATGAAGCCTCTGAGGAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GGTEPPSLGDGRARR*DQQFGFHEASEEPQ
Trigger: CTGGGGCTCCTCAGAGGCTTCATGGAACCCAAACTGCTGGTCTCACCTCCGAGCCCTGCCGTCGCCCAGGGAGGGCGGCTCCGTCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522283.1
CDS GCA 90 bp CTCCGACCCAGAACAGAAGCGGTGATTCAGAGCGGGATTAGGGAGTaGAGGAGGGACGGAGCCGCCCTCCCTGGGCGACGGCAGGGCTCG +
Preference number: 5 (lower is better)
Translates to: LRPRTEAVIQSGIRE*RRDGAALPGRRQGS
Trigger: CGAGCCCTGCCGTCGCCCAGGGAGGGCGGCTCCGTCCCTCCTGCACTCCCTAATCCCGCTCTGAATCACCGCTTCTGTTCTGGGTCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522283.1
CDS CCA 90 bp GGAAACCGGGACAGAGTGGTTGGGCAGGCACCTCAGTGTTCCCTCTaGGTCTCTCTTCACTCAGGGCCAAAGAAACCCTTCCAGCATCGG +
Preference number: 5 (lower is better)
Translates to: GNRDRVVGQAPQCSL*VSLHSGPKKPFQHR
Trigger: CCGATGCTGGAAGGGTTTCTTTGGCCCTGAGTGAAGAGAGACCCAGAGGGAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp CTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCTTGAGGGAGGCAGAGACCGGGACAGAGTGGTaGGGCAGGCACCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LMEPCASHARALILREAETGTEW*GRHLSV
Trigger: AACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGT...CTCTGCCTCCCTCAAGATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425340.3
ENST00000522966.2
CDS CCA 90 bp TTCCCCAGGCGGCCTATTGCATTGATCGTCCACATCCCCCTGAGCTaGCTGGGTCCCAGTGCCTTTGATGTTGAGGCTAGCACTGGTATC +
Preference number: 5 (lower is better)
Translates to: FPRRPIALIVHIPLS*LGPSAFDVEASTGI
Trigger: GATACCAGTGCTAGCCTCAACATCAAAGGCACTGGGACCCAGCCAGCTCAGGGGGATGTGGACGATCAATGCAATAGGCCGCCTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp GAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCAGGCGGCCTATTGCATaGATCGTCCACATCCCCCTG +
Preference number: 5 (lower is better)
Translates to: EERWVLLMEPCASHARALRRPIA*IVHIPL
Trigger: CAGGGGGATGTGGACGATCAATGCAATAGGCCGCCT...GAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTGGGTCCCAGTGCCTTaGATGTTGAGGCTAGCACTG +
Preference number: 5 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHWVPVP*MLRLAL
Trigger: CAGTGCTAGCCTCAACATCAAAGGCACTGGGACCCA...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATAGGCGGCCTATTGCATaGATCGTCCACATCCCCCTG +
Preference number: 5 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHRRPIA*IVHIPL
Trigger: CAGGGGGATGTGGACGATCAATGCAATAGGCCGCCT...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCAAGGCGGCCTATTGCATaGATCGTCCACATCCCCCTG +
Preference number: 5 (lower is better)
Translates to: TEERWVLLMEPCASHARARRPIA*IVHIPL
Trigger: CAGGGGGATGTGGACGATCAATGCAATAGGCCGCCT...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp AGGGGACTTCCTGCAGTGAACAACCTACACAACCCCTCAGGGCATCTCTGTTGTACCGGGACAGAGTGGTaGGGCAGGCACCTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: RGLPAVNNLHNPSGHLCCTGTEW*GRHLSV
Trigger: AACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGT...ACAACAGAGATGCCCTGAGGGGTTGTGTAGGTTGTTCACTGCAGGAAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CAA 90 bp CGGAACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATTGGGTCCCAGTGCCTTaGATGTTGAGGCTAGCACTG +
Preference number: 5 (lower is better)
Translates to: RNALKFTEPGWSLSSSNDWVPVP*MLRLAL
Trigger: CAGTGCTAGCCTCAACATCAAAGGCACTGGGACCCA...ATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CAA 90 bp CAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCTGGCTTAAAGATTTaGAGGAAAGGGGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: QKRDGSCSWNHVLLMPGHSGLKI*RKGESG
Trigger: CCCCGACTCCCCTTTCCTCAAAATCTTTAAGCCAGA...GTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp ACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACCAGTGCCTTTGATGTaGAGGCTAGCACTGGTATCT +
Preference number: 5 (lower is better)
Translates to: TEERWVLLMEPCASHARAPVPLM*RLALVS
Trigger: AGATACCAGTGCTAGCCTCAACATCAAAGGCACTGG...TGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp CACAGAAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCAGTAGAGCAAAATCTTaGGCAGGTGAGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: HRREMGPAHGTMCFSCPGSRAKS*AGEPSM
Trigger: CATTGAGGGCTCACCTGCCAAAGATTTTGCTCTACT...GCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp AGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATTCTGGCTTAAAGATTTaGAGGAAAGGGGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: REMGPAHGTMCFSCPGTHSGLKI*RKGESG
Trigger: CCCCGACTCCCCTTTCCTCAAAATCTTTAAGCCAGA...ATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp AAGAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCAAGTAGAGCAAAATCTTaGGCAGGTGAGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: KRDGSCSWNHVLLMPGHSSRAKS*AGEPSM
Trigger: CATTGAGGGCTCACCTGCCAAAGATTTTGCTCTACT...TGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS-3UTR CAA 90 bp CCAGGATTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCATCTGGCTTAAAGATTTaGAGGAAAGGGGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: PGLKRQDLWTWMHASYKPSGLKI*RKGESG
Trigger: CCCCGACTCCCCTTTCCTCAAAATCTTTAAGCCAGA...TGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CAA 90 bp GAGAGATGGGTCCTGCTCATGGAACCATGTGCTTCTCATGCCCGGGCACTCATCGAAGTCTCATTTCTTTaGCCTCCTATCGGGTCACAT +
Preference number: 5 (lower is better)
Translates to: ERWVLLMEPCASHARALIEVSFL*PPIGSH
Trigger: ATGTGACCCGATAGGAGGCAAAAGAAATGAGACTTC...GATGAGTGCCCGGGCATGAGAAGCACATGGTTCCATGAGCAGGACCCATCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CAA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATCCTAGAAAGCCAGGATaGAAGAGGCAGGACCTATGG +
Preference number: 5 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHPRKPG*KRQDLW
Trigger: CCATAGGTCCTGCCTCTTCAATCCTGGCTTTCTAGG...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CAA 90 bp AACGCCCTGAAGTTCACTGAGCCAGGCTGGTCTCTCAGTTCTAGCAATGATCATCCAGTGCCTTTGATGTaGAGGCTAGCACTGGTATCT +
Preference number: 5 (lower is better)
Translates to: NALKFTEPGWSLSSSNDHPVPLM*RLALVS
Trigger: AGATACCAGTGCTAGCCTCAACATCAAAGGCACTGG...ATGATCATTGCTAGAACTGAGAGACCAGCCTGGCTCAGTGAACTTCAGGGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CAA 90 bp CCAGGATTGAAGAGGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAGCCAATATGGCACATTaGTGCAAACTGGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: PGLKRQDLWTWMHASYKPANMAH*CKLEKG
Trigger: GCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGC...TGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCCTCTTCAATCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CAA 90 bp TGCATGCCAGCTACAAGCCAATATGGCACATTTGTGCAAACTGGAAAAAGGCTCGCAGGACCTATGGACTaGGATGCATGCCAGCTACAA +
Preference number: 5 (lower is better)
Translates to: CMPATSQYGTFVQTGKRLAGPMD*DACQLQ
Trigger: TTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGC...GAGCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGCTTGTAGCTGGCATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CAA 90 bp CAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTGTAGTAGAGCAAAATCTTaGGCAGGTGAGCCCTCAATG +
Preference number: 5 (lower is better)
Translates to: QDLWTWMHASYKPIWHICSRAKS*AGEPSM
Trigger: CATTGAGGGCTCACCTGCCAAAGATTTTGCTCTACT...ACAAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391876.5
ENST00000425340.3
CDS-3UTR CAA 90 bp GGCAGGACCTATGGACTTGGATGCATGCCAGCTACAAGCCAATATGGCACATTTCTCAGGGCATCTCTGTaGTCTACTCTAAAGCCATTT +
Preference number: 5 (lower is better)
Translates to: GRTYGLGCMPATSQYGTFLRASL*STLKPF
Trigger: AAATGGCTTTAGAGTAGACAACAGAGATGCCCTGAG...AAATGTGCCATATTGGCTTGTAGCTGGCATGCATCCAAGTCCATAGGTCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CAA 90 bp AAGGTTTCATTCATTCTTCAAAAGGGACCAAGACAAGAACGAGCCTCTTTCTGCCCAAGGACACCTGGTTaGATGAGTAGACTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: KVSFILQKGPRQERASFCPRTPG*MSRLWV
Trigger: GACCCACAGTCTACTCATCAAACCAGGTGTCCTTGG...GCAGAAAGAGGCTCGTTCTTGTCTTGGTCCCTTTTGAAGAATGAATGAAACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CAA 90 bp AAGGTTTCATTCATTCTTCAAAAGGGACCAAGACAAGAACGAGCCTCTTTCTGCCCAGTGCCTTTGATGTaGAGGCTAGCACTGGTATCT +
Preference number: 5 (lower is better)
Translates to: KVSFILQKGPRQERASFCPVPLM*RLALVS
Trigger: AGATACCAGTGCTAGCCTCAACATCAAAGGCACTGG...GCAGAAAGAGGCTCGTTCTTGTCTTGGTCCCTTTTGAAGAATGAATGAAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CAA 90 bp ATACAGCTAAGAAATGGTAGCACAGCATGTGAAGATGGATGGAGCTCAGGTGACGCCAATATGGCACATTaGTGCAAACTGGAAAAAGGC +
Preference number: 5 (lower is better)
Translates to: IQLRNGSTACEDGWSSGDANMAH*CKLEKG
Trigger: GCCTTTTTCCAGTTTGCACAAATGTGCCATATTGGC...GTCACCTGAGCTCCATCCATCTTCACATGCTGTGCTACCATTTCTTAGCTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS-3UTR CAA 90 bp GGTCTCTCAGTTCTAGCAATGATCATCCCAGGCCCTAGAAAGCCAGGATTGAAGCTCTTTCTGCTGTTTTaGAAAGGAATTATCTGCATG +
Preference number: 5 (lower is better)
Translates to: GLSVLAMIIPGPRKPGLKLFLLF*KGIICM
Trigger: CATGCAGATAATTCCTTTCAAAAACAGCAGAAAGAG...CTTCAATCCTGGCTTTCTAGGGCCTGGGATGATCATTGCTAGAACTGAGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS TCA 72 bp GAGCCGCCCTCCCTGGGCGACGGCAGGGCTCGGAGGTaGGACCAGCAGTTTGGGTTCCATGAAGCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: EPPSLGDGRARR*DQQFGFHEASE
Trigger: CTCAGAGGCTTCATGGAACCCAAACTGCTGGTCTCACCTCCGAGCCCTGCCGTCGCCCAGGGAGGGCGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522283.1
CDS GCA 72 bp AGAACAGAAGCGGTGATTCAGAGCGGGATTAGGGAGTaGAGGAGGGACGGAGCCGCCCTCCCTGGGCGACGG +
Preference number: 6 (lower is better)
Translates to: RTEAVIQSGIRE*RRDGAALPGRR
Trigger: CCGTCGCCCAGGGAGGGCGGCTCCGTCCCTCCTGCACTCCCTAATCCCGCTCTGAATCACCGCTTCTGTTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522283.1
CDS GCA 72 bp AGGGTGGAGGCAGGAAAGTCGGGTCACCACCAGCTGTaGGCGAGCCATCTGCACCATTACTGCCAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: RVEAGKSGHHQL*ASHLHHYCQGG
Trigger: ACCACCCTGGCAGTAATGGTGCAGATGGCTCGCGCACAGCTGGTGGTGACCCGACTTTCCTGCCTCCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522283.1
CDS CCA 72 bp GCATGGCTGGTCCTGCTGAAGGAAACCGGGACAGAGTaGTTGGGCAGGCACCTCAGTGTTCCCTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: AWLVLLKETGTE*LGRHLSVPSGS
Trigger: AGACCCAGAGGGAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTCCTTCAGCAGGACCAGCCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522966.2
CDS CAA 72 bp CACCTGGTCCTGCTGAAGGAAACCGGGACAGAGTGGTaGGGCAGGCACCTCAGTGTTCCCTCTGGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: HLVLLKETGTEW*GRHLSVPSGSL
Trigger: GAGAGACCCAGAGGGAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTCCTTCAGCAGGACCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS CAA 72 bp TGGCTGGTCCTGCTGAAGGAAACCGGGACAGAGTGGTaGGGCAGGCACCTCAGTGTTCCCTCTGGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: WLVLLKETGTEW*GRHLSVPSGSL
Trigger: GAGAGACCCAGAGGGAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTCCTTCAGCAGGACCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522966.2
CDS CAA 90 bp CGACCAGCATGGCTGGTCCTGCTGAAGGAAACCGGGACAGAGTGGTaGGGCAGGCACCTCAGTGTTCCCTCTGGGTCTCTCTTCACTCAG +
Preference number: 6 (lower is better)
Translates to: RPAWLVLLKETGTEW*GRHLSVPSGSLFTQ
Trigger: CTGAGTGAAGAGAGACCCAGAGGGAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTCCTTCAGCAGGACCAGCCATGCTGGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522966.2
CDS CCA 72 bp TCTCACCTGGTCCTGCTGAAGGAAACCGGGACAGAGTaGTTGGGCAGGCACCTCAGTGTTCCCTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: SHLVLLKETGTE*LGRHLSVPSGS
Trigger: AGACCCAGAGGGAACACTGAGGTGCCTGCCCAACCACTCTGTCCCGGTTTCCTTCAGCAGGACCAGGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425340.3
CDS CCA 72 bp CGGCCTATTGCATTGATCGTCCACATCCCCCTGAGCTaGCTGGGTCCCAGTGCCTTTGATGTTGAGGCTAGC +
Preference number: 6 (lower is better)
Translates to: RPIALIVHIPLS*LGPSAFDVEAS
Trigger: GCTAGCCTCAACATCAAAGGCACTGGGACCCAGCCAGCTCAGGGGGATGTGGACGATCAATGCAATAGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS TCA 72 bp ACCCCACCTTTATTCTCCGACCCAGAACAGAAGCGGTaGTTCAGAGCGGGATTAGGGAGTGCAGGAGGGACG +
Preference number: 6 (lower is better)
Translates to: TPPLFSDPEQKR*FRAGLGSAGGT
Trigger: CGTCCCTCCTGCACTCCCTAATCCCGCTCTGAATCACCGCTTCTGTTCTGGGTCGGAGAATAAAGGTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522283.1
CDS CCA 72 bp GACAGAGTGGTTGGGCAGGCACCTCAGTGTTCCCTCTaGGTCTCTCTTCACTCAGGGCCAAAGAAACCCTTC +
Preference number: 6 (lower is better)
Translates to: DRVVGQAPQCSL*VSLHSGPKKPF
Trigger: GAAGGGTTTCTTTGGCCCTGAGTGAAGAGAGACCCAGAGGGAACACTGAGGTGCCTGCCCAACCACTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425340.3
ENST00000522966.2
CDS CCA 72 bp AGGCTAGCACTGGTATCTGCACCGGTAACTCCCACATaGCTTGAATCTTCGCTAGCCGCTGCTGAACGTGAA +
Preference number: 6 (lower is better)
Translates to: RLALVSAPVTPT*LESSLAAAERE
Trigger: TTCACGTTCAGCAGCGGCTAGCGAAGATTCAAGCCATGTGGGAGTTACCGGTGCAGATACCAGTGCTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2
CDS TCA 72 bp AGAAAAGGTCTCAAAGAATGGGCCAGCATTAGTGCTTaGGTAAGGGGGACAGGTCTGCGGCAATCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: RKGLKEWASISA*VRGTGLRQSLS
Trigger: GGACAGGGATTGCCGCAGACCTGTCCCCCTTACTCAAGCACTAATGCTGGCCCATTCTTTGAGACCTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000391876.5
ENST00000425340.3
ENST00000522966.2