RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FUT10 (Homo sapiens)

Ensembl gene IDs: ENSG00000172728

Ensembl transcript IDs: ENST00000327671.10, ENST00000416169.5, ENST00000517891.1, ENST00000517942.1, ENST00000518076.1, ENST00000518672.5, ENST00000519440.5, ENST00000520503.1, ENST00000520767.5, ENST00000520935.1, ENST00000524021.1

Found 343 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTTGTCTTCTGAGGTGCTCCAGTAGATGCCCCAGACAGGAGAGCTaGACCTTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCAC +
Preference number: 1 (lower is better)
Translates to: PCLLRCSSRCPRQES*TFPIAGSEMTGNAH
Trigger: GTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAAGGTTCAGCTCTCCTGTCTGGGGCATCTACTGGAGCACCTCAGAAGACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 90 bp CGCTGCTCACTGCTAAGCACACCAAGGGCACAGCCTTCAATACAATaGGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCC +
Preference number: 1 (lower is better)
Translates to: RCSLLSTPRAQPSIQ*ELMLSKHSSIPPHA
Trigger: GGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCTCATTGTATTGAAGGCTGTGCCCTTGGTGTGCTTAGCAGTGAGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 90 bp AATGACAGGAAATGCCCACAAACTGAATGCCTGTGGCTGCCACTGTaGCAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGC +
Preference number: 1 (lower is better)
Translates to: NDRKCPQTECLWLPL*QAAHHPTNRQISFS
Trigger: GCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATTCAGTTTGTGGGCATTTCCTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR GCA 90 bp GGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTGGCTaGCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCA +
Preference number: 1 (lower is better)
Translates to: GSEMTGNAHKLNACG*HCDRLHIILRTDKS
Trigger: TGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 90 bp GCTTCTATAAGGAGGTATTGGTTTTGGTTCTCCTTTCTCACACGCTaGCTGACAAAGCCCAGCCAGAGCTACCTAATGAAGACGCTGCTC +
Preference number: 1 (lower is better)
Translates to: ASIRRYWFWFSFLTR*LTKPSQSYLMKTLL
Trigger: GAGCAGCGTCTTCATTAGGTAGCTCTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTTATAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 90 bp TCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTaGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: SSYEQTNQLQHNWSS*GYSLLLSRCSKCPG
Trigger: GCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 90 bp TCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATTGGTTTTaGTTCTCCTTTCTCACACGCTGGCTGACAAAGCCCAGCCAGAGC +
Preference number: 1 (lower is better)
Translates to: SSNVILLASIRRYWF*FSFLTRWLTKPSQS
Trigger: GCTCTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 90 bp CTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTaGATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGG +
Preference number: 1 (lower is better)
Translates to: LDRLPPLHKESTHSR*ISTKGSKYVGPQTR
Trigger: CCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAGACGATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 90 bp CTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATTaGTTTTGGTTCTCCTTTCTCACACGCTGGCTGACAAAGCCCAGC +
Preference number: 1 (lower is better)
Translates to: LLSSNVILLASIRRY*FWFSFLTRWLTKPS
Trigger: GCTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 90 bp TCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTaGATCATAAGCATAGCAATTCTTAATATTATTCTGCGCAGCAGA +
Preference number: 1 (lower is better)
Translates to: SLLLSRCSKCPGCPA*IISIAILNIILRSR
Trigger: TCTGCTGCGCAGAATAATATTAAGAATTGCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR GCA 90 bp ATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTaGAGGATACCAGGTTTGCCAAATACCAATAAGCTGTTGAGAGTG +
Preference number: 1 (lower is better)
Translates to: ISHCQVLMYFMFMLG*RIPGLPNTNKLLRV
Trigger: CACTCTCAACAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR GCA 90 bp ATTACTCACTTACATCCCTGGAAACCAACAGATGGGATCTCTCATTaGCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATA +
Preference number: 1 (lower is better)
Translates to: ITHLHPWKPTDGISH*QVLMYFMFMLGCRI
Trigger: TATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGGTTTCCAGGGATGTAAGTGAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 90 bp ATAGTGGATAAACTTGAAACAGCTTTTATTACTCACTTACATCCCTaGAAACCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTAT +
Preference number: 1 (lower is better)
Translates to: IVDKLETAFITHLHP*KPTDGISHCQVLMY
Trigger: ATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGGTTTCCAGGGATGTAAGTGAGTAATAAAAGCTGTTTCAAGTTTATCCACTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp GCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGCCCAGACAGGAGAGCTaGACCTTCCCTATAGCAGGA +
Preference number: 2 (lower is better)
Translates to: ADAKQALVNSPSCHDTDMPRQES*TFPIAG
Trigger: TCCTGCTATAGGGAAGGTTCAGCTCTCCTGTCTGGG...CATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp ACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATAAGCATAGCAAGGCAGTAAGTATGTaGGTCCACAGACACGGACAT +
Preference number: 2 (lower is better)
Translates to: TLALLKMSRLSSLNHKHSKAVSM*VHRHGH
Trigger: ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTT...GCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp GATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGAGCCAGCTTCAGCACAATTaGAGTTCCTGGGGGTATTCA +
Preference number: 2 (lower is better)
Translates to: DAKQALVNSPSCHDTDMSQLQHN*SSWGYS
Trigger: TGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTG...GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CAA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATaGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: RLHIILRTDKSASAQ*EFLGVFTSTLALLK
Trigger: TTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CAA 90 bp CTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATTGGTTTaGGTTCTCCTTTCTCACACGCTGGCTGACAAAGCCCAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: LIQCDPSGFYKEVLV*VLLSHTLADKAQPE
Trigger: CTCTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR GCA 90 bp GCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGTGTATTTCATGTTCATaGTCGGCTGCAGGATACCAG +
Preference number: 2 (lower is better)
Translates to: ADAKQALVNSPSCHDTDMCISCS*SAAGYQ
Trigger: CTGGTATCCTGCAGCCGAGCATGAACATGAAATACA...CATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR GCA 90 bp GCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGCGAAATGACAGGAAATaGCCACAAACTGAATGCCTG +
Preference number: 2 (lower is better)
Translates to: ADAKQALVNSPSCHDTDMRNDRK*PQTECL
Trigger: CAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCG...CATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp GCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGCACAATTGGAGTTCCTaGGGGTATTCACTTCTACTC +
Preference number: 2 (lower is better)
Translates to: ADAKQALVNSPSCHDTDMHNWSS*GYSLLL
Trigger: GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTG...CATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CAA 90 bp CCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATaGGTTTTGGTTCTCCTTTCTCACACGCTGGCTGACAAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: PSLIQCDPSGFYKEV*VLVLLSHTLADKAQ
Trigger: CTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp GCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGAGTACTCACTCTAGGTaGATTTCCACAAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: ADAKQALVNSPSCHDTDMSTHSR*ISTKGS
Trigger: ACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACT...CATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCACTGTTGAGAGTGAGGTaGGTATCAAGAATCTATAGC +
Preference number: 2 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESLLRVR*VSRIYS
Trigger: GCTATAGATTCTTGATACTCACCTCACTCTCAACAG...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCCAGGCTGTCCAGCCTaGATCATAAGCATAGCAATT +
Preference number: 2 (lower is better)
Translates to: RLHIILRTDKSASAQLEFPGCPA*IISIAI
Trigger: AATTGCTATGCTTATGATTCAGGCTGGACAGCCTGG...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR GCA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCAGGATACCAGGTTTaGCAAATACCAATAAGCTGT +
Preference number: 2 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQAGYQV*QIPISC
Trigger: ACAGCTTATTGGTATTTGGCAAACCTGGTATCCTGC...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR GCA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTATGTTCATGCTCGGCTaGAGGATACCAGGTTTGCCA +
Preference number: 2 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLMFMLG*RIPGLP
Trigger: TGGCAAACCTGGTATCCTGCAGCCGAGCATGAACAT...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR GCA 90 bp TTCCAAGACCAGCCCAATCACTTCTTTTTGGATGCAAAAACTAAGGCCGATGGACTTCTACTCTCGCGCTaGTCAAAATGTCCAGGCTGT +
Preference number: 2 (lower is better)
Translates to: FQDQPNHFFLDAKTKADGLLLSR*SKCPGC
Trigger: ACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAG...TCCATCGGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGGGCTGGTCTTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATGAAATGCCCACAAACTaGATGCCTGTGGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: YRHLLSSNVILLASIRRYEMPTN*MPVAAT
Trigger: AGTGGCAGCCACAGGCATTCAGTTTGTGGGCATTTC...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR GCA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTTGTATTTCATGTTCATaGTCGGCTGCAGGATACCAG +
Preference number: 2 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACCISCS*SAAGYQ
Trigger: CTGGTATCCTGCAGCCGAGCATGAACATGAAATACA...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCAGTACTCACTCTAGGTaGATTTCCACAAAAGGCAGT +
Preference number: 2 (lower is better)
Translates to: RLHIILRTDKSASAQLEFSTHSR*ISTKGS
Trigger: ACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACT...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCCTGTTGAGAGTGAGGTaGGTATCAAGAATCTATAGC +
Preference number: 2 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTLLRVR*VSRIYS
Trigger: GCTATAGATTCTTGATACTCACCTCACTCTCAACAG...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR TCA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGCAGCCTTCAATACAATaGGAGCTGATGCTAAGCAAG +
Preference number: 2 (lower is better)
Translates to: SYRHLLSSNVILLASIRRQPSIQ*ELMLSK
Trigger: CTTGCTTAGCATCAGCTCTCATTGTATTGAAGGCTG...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCCCACAGACACGGACATaGAAGATAACCAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLPQTRT*KITSVH
Trigger: ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGG...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATCCACAGACACGGACATaGAAGATAACCAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: YRHLLSSNVILLASIRRYPQTRT*KITSVH
Trigger: ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGG...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCAAGGCAGTAAGTATGTaGGTCCACAGACACGGACAT +
Preference number: 2 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLKAVSM*VHRHGH
Trigger: ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTT...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATCAGCTTCAGCACAATTaGAGTTCCTGGGGGTATTCA +
Preference number: 2 (lower is better)
Translates to: YRHLLSSNVILLASIRRYQLQHN*SSWGYS
Trigger: TGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTG...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATCTGGAAACCAACAGATaGGATCTCTCATTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: YRHLLSSNVILLASIRRYLETNR*DLSLPS
Trigger: ACTTGGCAATGAGAGATCCCATCTGTTGGTTTCCAG...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 72 bp CTGAGGTGCTCCAGTAGATGCCCCAGACAGGAGAGCTaGACCTTCCCTATAGCAGGATCCGAAATGACAGGA +
Preference number: 3 (lower is better)
Translates to: LRCSSRCPRQES*TFPIAGSEMTG
Trigger: TCCTGTCATTTCGGATCCTGCTATAGGGAAGGTTCAGCTCTCCTGTCTGGGGCATCTACTGGAGCACCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 72 bp CACTCGTCAATTCCCCCTCATGCCATGACACAGACATaGGCATCACAGACTCTTCCTGTCCTCTGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: HSSIPPHAMTQT*ASQTLPVLWLP
Trigger: AGGCAGCCAGAGGACAGGAAGAGTCTGTGATGCTCATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR GCA 72 bp ATGACAGGAAATGCCCACAAACTGAATGCCTGTGGCTaGCACTGTGACAGGCTGCACATCATCCTACGAACA +
Preference number: 3 (lower is better)
Translates to: MTGNAHKLNACG*HCDRLHIILRT
Trigger: TGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATTCAGTTTGTGGGCATTTCCTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 72 bp AAATGCCCACAAACTGAATGCCTGTGGCTGCCACTGTaGCAGGCTGCACATCATCCTACGAACAGACAAATC +
Preference number: 3 (lower is better)
Translates to: KCPQTECLWLPL*QAAHHPTNRQI
Trigger: GATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATTCAGTTTGTGGGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 72 bp AGGAGGTATTGGTTTTGGTTCTCCTTTCTCACACGCTaGCTGACAAAGCCCAGCCAGAGCTACCTAATGAAG +
Preference number: 3 (lower is better)
Translates to: RRYWFWFSFLTR*LTKPSQSYLMK
Trigger: CTTCATTAGGTAGCTCTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CAA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGTGCAGGATACCAGGTTaGCCAAATACCAATAAGCTG +
Preference number: 3 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQCRIPG*PNTNKL
Trigger: CAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCA...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CAA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACACAAGACATTCTACTTaGAAGGGAAAATGGGAGGCG +
Preference number: 3 (lower is better)
Translates to: RADAKQALVNSPSCHDTDTRHST*KGKWEA
Trigger: CGCCTCCCATTTTCCCTTCAAAGTAGAATGTCTTGT...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CAA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTTCAGCTTCAGCACAATaGGAGTTCCTGGGGGTATTC +
Preference number: 3 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACSASAQ*EFLGVF
Trigger: GAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGA...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CAA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCGATCGTCTCCCTCCATaGCACAAGGAAAGTACTCAC +
Preference number: 3 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTDRLPP*HKESTH
Trigger: GTGAGTACTTTCCTTGTGCAATGGAGGGAGACGATC...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 72 bp GAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTaGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAA +
Preference number: 3 (lower is better)
Translates to: EQTNQLQHNWSS*GYSLLLSRCSK
Trigger: TTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CAA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTTGCAGGATACCAGGTTaGCCAAATACCAATAAGCTG +
Preference number: 3 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACCRIPG*PNTNKL
Trigger: CAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCA...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 72 bp CTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTaGATTTCCACAAAAGGCAGTAAGTATGTGGGTCCA +
Preference number: 3 (lower is better)
Translates to: LPPLHKESTHSR*ISTKGSKYVGP
Trigger: TGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR TCA 72 bp CTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTaGATCATAAGCATAGCAATTCTTAATATTATTCTG +
Preference number: 3 (lower is better)
Translates to: LSRCSKCPGCPA*IISIAILNIIL
Trigger: CAGAATAATATTAAGAATTGCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR GCA 72 bp TGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTaGAGGATACCAGGTTTGCCAAATACCAATAAGCTG +
Preference number: 3 (lower is better)
Translates to: CQVLMYFMFMLG*RIPGLPNTNKL
Trigger: CAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR-3UTR CAA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGAGATGGGATCTCTCATaGCCAAGTTCTAATGTATTT +
Preference number: 3 (lower is better)
Translates to: SYRHLLSSNVILLASIRRRWDLS*PSSNVF
Trigger: AAATACATTAGAACTTGGCAATGAGAGATCCCATCT...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 72 bp AAACTTGAAACAGCTTTTATTACTCACTTACATCCCTaGAAACCAACAGATGGGATCTCTCATTGCCAAGTT +
Preference number: 3 (lower is better)
Translates to: KLETAFITHLHP*KPTDGISHCQV
Trigger: AACTTGGCAATGAGAGATCCCATCTGTTGGTTTCCAGGGATGTAAGTGAGTAATAAAAGCTGTTTCAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CCA 72 bp TTTTATTACTCACTTACATCCCTGGAAACCAACAGATaGGATCTCTCATTGCCAAGTTCTAATGTATTTCAT +
Preference number: 3 (lower is better)
Translates to: FYYSLTSLETNR*DLSLPSSNVFH
Trigger: ATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGGTTTCCAGGGATGTAAGTGAGTAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACTTCTCACACGCTGGCTaGCAAAGCCCAGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDFSHAG*QSPARA
Trigger: AGCTCTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAA...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACCTGCACTGCCATTCCTaGTGGGACCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDLHCHS*WDQVSM
Trigger: CATGGAGACCTGGTCCCAGCAGGAATGGCAGTGCAG...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGAGCAAAAGCTTCCTCCTCTaGATCCGCACCATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: DAKQALVNSPSCHDTDMSKSFLL*IRTMLP
Trigger: GGGCAGCATGGTGCGGATTCAGAGGAGGAAGCTTTT...GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327671.10
CDS-3UTR TCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACTGGTGGGTCACAGTCTaGCTGTACATACACCAGCGG +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDWWVTV*LYIHQR
Trigger: CCGCTGGTGTATGTACAGTCAGACTGTGACCCACCA...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCCCAGACAGGAGAGCTaGACCTTCCCTATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQPRQES*TFPIAG
Trigger: TCCTGCTATAGGGAAGGTTCAGCTCTCCTGTCTGGG...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp ACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATAAGCATAGCCCCAGACAGGAGAGCTaGACCTTCCCTATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLALLKMSRLSSLNHKHSPRQES*TFPIAG
Trigger: TCCTGCTATAGGGAAGGTTCAGCTCTCCTGTCTGGG...GCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATGGGCGCCAATTTCCTaGACTGCCATTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESWAPIS*TAIPAG
Trigger: CCCAGCAGGAATGGCAGTGCAGGAAATTGGCGCCCA...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACGGTTGTGAGAGGGTCTaGCTTGGCATCGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDGCERV*LGIERK
Trigger: CTTCCTCTCGATGCCAAGCCAGACCCTCTCACAACC...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACTCCTTTCTCACACGCTaGCTGACAAAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDSFLTR*LTKPSQ
Trigger: CTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGA...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATCCTGCCCTGGGTGACTaGCAGAGGGCTAACCTGGTT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHPALGD*QRANLV
Trigger: AACCAGGTTAGCCCTCTGTCAGTCACCCAGGGCAGG...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR GCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATTCTGAATCCGCACCATaGTGCCCTGCCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHSESAP*CPALGD
Trigger: GTCACCCAGGGCAGGGCAGCATGGTGCGGATTCAGA...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR GCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACGACGCACAGGCAAGATaGCAAAAGCTTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDDAQAR*QKLPPL
Trigger: CAGAGGAGGAAGCTTTTGGCATCTTGCCTGTGCGTC...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327671.10
CDS-3UTR GCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATAGTGGCAAGTGGGAATaGCTGCTGAACGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHSGKWE*LLNVAV
Trigger: CACTGCCACGTTCAGCAGGCATTCCCACTTGCCACT...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACTCCTGGTTGACGTCTTaGACTCCCCATTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDSWLTS*TPHFRS
Trigger: GGAACGGAAATGGGGAGTGCAAGACGTCAACCAGGA...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp ACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATAAGCATAGCGCCACTGTGACAGGCTaGACATCATCCTACGAACAG +
Preference number: 4 (lower is better)
Translates to: TLALLKMSRLSSLNHKHSATVTG*TSSYEQ
Trigger: CTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGC...GCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATCATGCTGCCCTGCCCTaGGTGACTGACAGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHHAALP*VTDRGL
Trigger: TAGCCCTCTGTCAGTCACCCAGGGCAGGGCAGCATG...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR CCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATGCATCTGCTCCACATTaGCCTAACCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHASAPH*PNLPVS
Trigger: GGAGACTGGGAGGTTAGGCCAATGTGGAGCAGATGC...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTGGGACCAGGTCTCCATaGAGGACTGAGATCCGAGGT +
Preference number: 4 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACGTRSP*RTEIRG
Trigger: ACCTCGGATCTCAGTCCTTCATGGAGACCTGGTCCC...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAGGGACCAGGTCTCCATaGAGGACTGAGATCCGAGGT +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRGTRSP*RTEIRG
Trigger: ACCTCGGATCTCAGTCCTTCATGGAGACCTGGTCCC...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATAAAACAGCCCAGTCATaGTGGGCTTTCCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHKTAQS*WAFRGR
Trigger: TCTGCCTCGGAAAGCCCATCATGACTGGGCTGTTTT...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGACTGTGGCTGCCACTGTaGCAGGCTGCACATCATCCT +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRLWLPL*QAAHHP
Trigger: AGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAG...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATTCCCCCTCATGCCATaGCACAGACATGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESFPLMP*HRHEHH
Trigger: GTGATGCTCATGTCTGTGTCATGGCATGAGGGGGAA...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATCTGAATGCCTGTGGCTaGCACTGTGACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHLNACG*HCDRLH
Trigger: GTGCAGCCTGTCACAGTGGCAGCCACAGGCATTCAG...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATCCTTGTCTTCTGAGGTaGTCCAGTAGATGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHPCLLR*SSRCPR
Trigger: TCTGGGGCATCTACTGGAGCACCTCAGAAGACAAGG...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACCATGGAAGAACCATCTaGGCGCCAATTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDHGRTI*APISCT
Trigger: AGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATG...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGAGCGGCATCCATAGAGGCTaGATTTTTCAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DAKQALVNSPSCHDTDMSGIHRG*IFQLLR
Trigger: CCTCAGCAGCTGAAAAATCCAGCCTCTATGGATGCC...GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp ACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATAAGCATAGCAGAAAGCAAACACTGTaGGCTCTGGGCAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: TLALLKMSRLSSLNHKHSRKQTL*ALGNSG
Trigger: ACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCT...GCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTGGGACCAGGTCTCCATaGAGGACTGAGATCCGAGGT +
Preference number: 4 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLGTRSP*RTEIRG
Trigger: ACCTCGGATCTCAGTCCTTCATGGAGACCTGGTCCC...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATTGGTGGGTCACAGTCTaGCTGTACATACACCAGCGG +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHWWVTV*LYIHQR
Trigger: CCGCTGGTGTATGTACAGTCAGACTGTGACCCACCA...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATGGTGGGTCACAGTCTaGCTGTACATACACCAGCGG +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRWWVTV*LYIHQR
Trigger: CCGCTGGTGTATGTACAGTCAGACTGTGACCCACCA...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp AATGCCTGTGGCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAAGGATTTTTCAGCTGCTaGGGGAGGTCTTTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: NACGCHCDRLHIILRTDKGFFSC*GRSLFR
Trigger: ACGAAACAAAGACCTCCCTCAGCAGCTGAAAAATCC...TTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp AATGCCTGTGGCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAAGCCAGTTCCCTGGGGTaGGAAAATTCTGATACAAGA +
Preference number: 4 (lower is better)
Translates to: NACGCHCDRLHIILRTDKASSLG*ENSDTR
Trigger: TCTTGTATCAGAATTTTCTCACCCCAGGGAACTGGC...TTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGTGTAATTGTCCTGGTTaGCGTCTTGCACTCCCCATT +
Preference number: 4 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQCNCPG*RLALPI
Trigger: AATGGGGAGTGCAAGACGTCAACCAGGACAATTACA...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTGGAGTCCGGAGTGGTaGGAAAGCAAACACTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTWSPEW*ESKHCG
Trigger: CCCACAGTGTTTGCTTTCTCACCACTCCGGACTCCA...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTTGGAGTCCGGAGTGGTaGGAAAGCAAACACTGTGGG +
Preference number: 4 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACWSPEW*ESKHCG
Trigger: CCCACAGTGTTTGCTTTCTCACCACTCCGGACTCCA...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp AATGCCTGTGGCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAACCAGGCTGTCCAGCCTaGATCATAAGCATAGCAATT +
Preference number: 4 (lower is better)
Translates to: NACGCHCDRLHIILRTDKPGCPA*IISIAI
Trigger: AATTGCTATGCTTATGATTCAGGCTGGACAGCCTGG...TTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp TTCCAAGACCAGCCCAATCACTTCTTTTTGGATGCAAAAACTAAGGCCGATGGACTGTGGCTGCCACTGTaGCAGGCTGCACATCATCCT +
Preference number: 4 (lower is better)
Translates to: FQDQPNHFFLDAKTKADGLWLPL*QAAHHP
Trigger: AGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAG...TCCATCGGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGGGCTGGTCTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCAGCCATGACACAGACATaGGCATCACAGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESAMTQT*ASQTLP
Trigger: AGGAAGAGTCTGTGATGCTCATGTCTGTGTCATGGC...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACCGAGAGGAAGCAGCATaGAGTCTTCTTAGGCTATCA +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDREEAA*SLLRLS
Trigger: TGATAGCCTAAGAAGACTGCATGCTGCTTCCTCTCG...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTGCCAATTTCCTGCACTaGCATTCCTGCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACANFLH*HSCWDQ
Trigger: CTGGTCCCAGCAGGAATGGCAGTGCAGGAAATTGGC...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp GTCTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGTGGGCGCCAATTTCCTaGACTGCCATTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VSLHCTRKVLTLGEFPQKWAPIS*TAIPAG
Trigger: CCCAGCAGGAATGGCAGTGCAGGAAATTGGCGCCCA...CTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTGGTTGTGAGAGGGTCTaGCTTGGCATCGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTGCERV*LGIERK
Trigger: CTTCCTCTCGATGCCAAGCCAGACCCTCTCACAACC...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCCACTGCCATTCCTGCTaGGACCAGGTCTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLHCHSC*DQVSMK
Trigger: CTTCATGGAGACCTGGTCCCAGCAGGAATGGCAGTG...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGTACCCCCAGTTTCAGTaGCCTCCAGAACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQYPQFQ*PPELLS
Trigger: ACTGAGAAGTTCTGGAGGCCACTGAAACTGGGGGTA...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATTACCCCCAGTTTCAGTaGCCTCCAGAACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHYPQFQ*PPELLS
Trigger: ACTGAGAAGTTCTGGAGGCCACTGAAACTGGGGGTA...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGCCTGCCCTGGGTGACTaGCAGAGGGCTAACCTGGTT +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMPALGD*QRANLV
Trigger: AACCAGGTTAGCCCTCTGTCAGTCACCCAGGGCAGG...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR TCA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCTTGGAAGCCAGTCTGTaGTGCTGGGGGATCCGTAAT +
Preference number: 4 (lower is better)
Translates to: RLHIILRTDKSASAQLEFLEASL*CWGIRN
Trigger: ATTACGGATCCCCCAGCATCACAGACTGGCTTCCAA...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATTGGAAGCCAGTCTGTaGTGCTGGGGGATCCGTAAT +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRLEASL*CWGIRN
Trigger: ATTACGGATCCCCCAGCATCACAGACTGGCTTCCAA...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATGCCAGTTCCCTGGGGTaGGAAAATTCTGATACAAGA +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHASSLG*ENSDTR
Trigger: TCTTGTATCAGAATTTTCTCACCCCAGGGAACTGGC...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGAAATGCCCACAAACTaGATGCCTGTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHEMPTN*MPVAAT
Trigger: AGTGGCAGCCACAGGCATTCAGTTTGTGGGCATTTC...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCAACAGCGTGCTTCCCTTaGATAACATACAGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESTACFP*ITYSSS
Trigger: GGAACTGCTGTATGTTATTCAAGGGAAGCACGCTGT...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327671.10
CDS-3UTR GCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCTGCACTGCCATTCCTaGTGGGACCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVLHCHS*WDQVSM
Trigger: CATGGAGACCTGGTCCCAGCAGGAATGGCAGTGCAG...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCTGGGCGCCAATTTCCTaGACTGCCATTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVWAPIS*TAIPAG
Trigger: CCCAGCAGGAATGGCAGTGCAGGAAATTGGCGCCCA...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTCTGAATCCGCACCATaGTGCCCTGCCCTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMSESAP*CPALGD
Trigger: GTCACCCAGGGCAGGGCAGCATGGTGCGGATTCAGA...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR GCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATCCTGGTTGACGTCTTaGACTCCCCATTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRSWLTS*TPHFRS
Trigger: GGAACGGAAATGGGGAGTGCAAGACGTCAACCAGGA...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATCGTCTCCCTCCATTaGACAAGGAAAGTACTCACT +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDIVSLH*TRKVLT
Trigger: AGTGAGTACTTTCCTTGTGCAATGGAGGGAGACGAT...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGTGTATTTCATGTTCATaGTCGGCTGCAGGATACCAG +
Preference number: 4 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQCISCS*SAAGYQ
Trigger: CTGGTATCCTGCAGCCGAGCATGAACATGAAATACA...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTGCCACTGTGACAGGCTaGACATCATCCTACGAACAG +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTATVTG*TSSYEQ
Trigger: CTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGC...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCCGAGACAACTTCACATaGAAGAACCATCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLRDNFT*KNHLGA
Trigger: GGCGCCCAGATGGTTCTTCCATGTGAAGTTGTCTCG...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGACGAGACAACTTCACATaGAAGAACCATCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRRDNFT*KNHLGA
Trigger: GGCGCCCAGATGGTTCTTCCATGTGAAGTTGTCTCG...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAGACAGAGGGCTAACCTaGTTACCAGGTGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRDRGLT*LPGVLS
Trigger: CGAGAGAACACCTGGTAACCAGGTTAGCCCTCTGTC...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR CCA 90 bp GTCTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCATCTGCTCCACATTaGCCTAACCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSLHCTRKVLTLGEFPQKASAPH*PNLPVS
Trigger: GGAGACTGGGAGGTTAGGCCAATGTGGAGCAGATGC...CTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGATGCTCTCCAAGTATTaGGTAGTTAGTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQMLSKY*VVSGKW
Trigger: CCACTTGCCACTAACTACCCAATACTTGGAGAGCAT...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTAAACACTGTGGGCTCTaGGCAACTCAGGTGGGTATC +
Preference number: 4 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACKHCGL*ATQVGI
Trigger: GATACCCACCTGAGTTGCCCAGAGCCCACAGTGTTT...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAAAACACTGTGGGCTCTaGGCAACTCAGGTGGGTATC +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRKHCGL*ATQVGI
Trigger: GATACCCACCTGAGTTGCCCAGAGCCCACAGTGTTT...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGAAGGCAGTAAGTATGTaGGTCCACAGACACGGACAT +
Preference number: 4 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQKAVSM*VHRHGH
Trigger: ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTT...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCTGGAAACCAACAGATaGGATCTCTCATTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQLETNR*DLSLPS
Trigger: ACTTGGCAATGAGAGATCCCATCTGTTGGTTTCCAG...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACTCCAGAACTTCTCAGTaGTGTAGTCATCACAAACTG +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDSRTSQ*CSHHKL
Trigger: CAGTTTGTGATGACTACATCACTGAGAAGTTCTGGA...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAGGTAAGCCCTTTTCCTaGAGCCTGATATTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRGKPFS*SLILAH
Trigger: GTGGGCTAATATCAGGCTTCAGGAAAAGGGCTTACC...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACAGTACTCACTCTAGGTaGATTTCCACAAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDSTHSR*ISTKGS
Trigger: ACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACT...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGAGCCTGTTGAGAGTGAGGTaGGTATCAAGAATCTATAGC +
Preference number: 4 (lower is better)
Translates to: DAKQALVNSPSCHDTDMSLLRVR*VSRIYS
Trigger: GCTATAGATTCTTGATACTCACCTCACTCTCAACAG...GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGCCATGACACAGACATaGGCATCACAGACTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHAMTQT*ASQTLP
Trigger: AGGAAGAGTCTGTGATGCTCATGTCTGTGTCATGGC...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATTTCTCACACGCTGGCTaGCAAAGCCCAGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YRHLLSSNVILLASIRRYFSHAG*QSPARA
Trigger: AGCTCTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAA...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTCCCCAGCTCAACCATaGCCTGGTTACCAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SYRHLLSSNVILLASIRRSPAQP*PGYQVF
Trigger: GAACACCTGGTAACCAGGTCATGGTTGAGCTGGGGA...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518672.5
CDS-3UTR GCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCGCCAATTTCCTGCACTaGCATTCCTGCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVANFLH*HSCWDQ
Trigger: CTGGTCCCAGCAGGAATGGCAGTGCAGGAAATTGGC...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATTCGTCTGATGTAACTTaGCAGTTCCCTGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHSSDVT*QFPGVR
Trigger: TCTCACCCCAGGGAACTGGCAAGTTACATCAGACGA...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp ACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATAAGCATAGCGCAGGATACCAGGTTTaGCAAATACCAATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLALLKMSRLSSLNHKHSAGYQV*QIPISC
Trigger: ACAGCTTATTGGTATTTGGCAAACCTGGTATCCTGC...GCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATCTTCTACTCTCGCGCTaGTCAAAATGTCCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHLLLSR*SKCPGC
Trigger: ACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAG...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATCGAAATGACAGGAAATaGCCACAAACTGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHRNDRK*PQTECL
Trigger: CAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCG...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGTCAATTCCCCCTCATaGCATGACACAGACATGAGC +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHVNSPS*HDTDMS
Trigger: GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGAC...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACCACTGCCATTCCTGCTaGGACCAGGTCTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: EYQESIARSSPSIAQGKYHCHSC*DQVSMK
Trigger: CTTCATGGAGACCTGGTCCCAGCAGGAATGGCAGTG...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATCATGGAAGAACCATCTaGGCGCCAATTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHHGRTI*APISCT
Trigger: AGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATG...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCGAGACAACTTCACATaGAAGAACCATCTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLRDNFT*KNHLGA
Trigger: GGCGCCCAGATGGTTCTTCCATGTGAAGTTGTCTCG...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCGTAGTTAGTGGCAAGTaGGAATGCCTGCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLVVSGK*ECLLNV
Trigger: CACGTTCAGCAGGCATTCCCACTTGCCACTAACTAC...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATATGCTCTCCAAGTATTaGGTAGTTAGTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHMLSKY*VVSGKW
Trigger: CCACTTGCCACTAACTACCCAATACTTGGAGAGCAT...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAGGCATCCATAGAGGCTaGATTTTTCAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRGIHRG*IFQLLR
Trigger: CCTCAGCAGCTGAAAAATCCAGCCTCTATGGATGCC...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp AATGCCTGTGGCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAAAGCACTTTTGTTACTTaGAAGCCAGTCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: NACGCHCDRLHIILRTDKSTFVT*KPVCDA
Trigger: AGCATCACAGACTGGCTTCCAAGTAACAAAAGTGCT...TTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGCTGTCAGAAGTCGCTaGTTAGAGATCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHAVRSR*LEISPF
Trigger: GAAGGGTGAGATCTCTAACCAGCGACTTCTGACAGC...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATAGAAAGCAAACACTGTaGGCTCTGGGCAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHRKQTL*ALGNSG
Trigger: ACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCT...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGCACAATTGGAGTTCCTaGGGGTATTCACTTCTACTC +
Preference number: 4 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQHNWSS*GYSLLL
Trigger: GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTG...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCTCCTTTCTCACACGCTaGCTGACAAAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVSFLTR*LTKPSQ
Trigger: CTGGCTGGGCTTTGTCAGCCAGCGTGTGAGAAAGGA...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACAAAACAGCCCAGTCATaGTGGGCTTTCCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: EYQESIARSSPSIAQGKYKTAQS*WAFRGR
Trigger: TCTGCCTCGGAAAGCCCATCATGACTGGGCTGTTTT...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATTCCAGAACTTCTCAGTaGTGTAGTCATCACAAACTG +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHSRTSQ*CSHHKL
Trigger: CAGTTTGTGATGACTACATCACTGAGAAGTTCTGGA...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACTTGGAAGCCAGTCTGTaGTGCTGGGGGATCCGTAAT +
Preference number: 4 (lower is better)
Translates to: EYQESIARSSPSIAQGKYLEASL*CWGIRN
Trigger: ATTACGGATCCCCCAGCATCACAGACTGGCTTCCAA...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTGTAATTGTCCTGGTTaGCGTCTTGCACTCCCCATT +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTCNCPG*RLALPI
Trigger: AATGGGGAGTGCAAGACGTCAACCAGGACAATTACA...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATTGTAATTGTCCTGGTTaGCGTCTTGCACTCCCCATT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHCNCPG*RLALPI
Trigger: AATGGGGAGTGCAAGACGTCAACCAGGACAATTACA...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGAGTCCGGAGTGGTaGGAAAGCAAACACTGTGGG +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMWSPEW*ESKHCG
Trigger: CCCACAGTGTTTGCTTTCTCACCACTCCGGACTCCA...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCGAAATGCCCACAAACTaGATGCCTGTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVEMPTN*MPVAAT
Trigger: AGTGGCAGCCACAGGCATTCAGTTTGTGGGCATTTC...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACTTCCCCCTCATGCCATaGCACAGACATGAGCATCAC +
Preference number: 4 (lower is better)
Translates to: EYQESIARSSPSIAQGKYFPLMP*HRHEHH
Trigger: GTGATGCTCATGTCTGTGTCATGGCATGAGGGGGAA...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATCGAGAGGAAGCAGCATaGAGTCTTCTTAGGCTATCA +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHREEAA*SLLRLS
Trigger: TGATAGCCTAAGAAGACTGCATGCTGCTTCCTCTCG...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGGCCAATTTCCTGCACTaGCATTCCTGCTGGGACCAG +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMANFLH*HSCWDQ
Trigger: CTGGTCCCAGCAGGAATGGCAGTGCAGGAAATTGGC...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp AATGCCTGTGGCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAAACCATAGAAGAGGAATaGTTTGGTCATGTGATGATG +
Preference number: 4 (lower is better)
Translates to: NACGCHCDRLHIILRTDKTIEEE*FGHVMM
Trigger: CATCATCACATGACCAAAGCATTCCTCTTCTATGGT...TTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATAGTGGCAAGTGGGAATaGCTGCTGAACGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YRHLLSSNVILLASIRRYSGKWE*LLNVAV
Trigger: CACTGCCACGTTCAGCAGGCATTCCCACTTGCCACT...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTTCGTCTGATGTAACTTaGCAGTTCCCTGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLSSDVT*QFPGVR
Trigger: TCTCACCCCAGGGAACTGGCAAGTTACATCAGACGA...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp GTCTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGATGTTCATGCTCGGCTaGAGGATACCAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VSLHCTRKVLTLGEFPQKMFMLG*RIPGLP
Trigger: TGGCAAACCTGGTATCCTGCAGCCGAGCATGAACAT...CTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATCTGAATGCCTGTGGCTaGCACTGTGACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHLNACG*HCDRLH
Trigger: GTGCAGCCTGTCACAGTGGCAGCCACAGGCATTCAG...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGGGTTGTGAGAGGGTCTaGCTTGGCATCGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMGCERV*LGIERK
Trigger: CTTCCTCTCGATGCCAAGCCAGACCCTCTCACAACC...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCCATGGAAGAACCATCTaGGCGCCAATTTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTHGRTI*APISCT
Trigger: AGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATG...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAAGCTCAACCATGACCTaGAGTGTGACAAGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRSSTMT*SVTSRK
Trigger: CTTTCTGCTTGTCACACTCCAGGTCATGGTTGAGCT...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327671.10
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGGCATCTGCTCCACATTaGCCTAACCTCCCAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMASAPH*PNLPVS
Trigger: GGAGACTGGGAGGTTAGGCCAATGTGGAGCAGATGC...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGAGAAGAGGAATGCTTTaGTCATGTGATGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQRRGML*SCDDGG
Trigger: ACCTCCATCATCACATGACCAAAGCATTCCTCTTCT...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCGCTGTCAGAAGTCGCTaGTTAGAGATCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTAVRSR*LEISPF
Trigger: GAAGGGTGAGATCTCTAACCAGCGACTTCTGACAGC...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATGGATTGTTCAAAGCTaGAAATCCACATCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESWIVQS*KSTSLA
Trigger: TGCGAGAGATGTGGATTTCCAGCTTTGAACAATCCA...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATCCTGGGCTTCTTTCTTaGATTGTTCAAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHPGLLS*IVQSWK
Trigger: TTTCCAGCTTTGAACAATCCAAGAAAGAAGCCCAGG...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTCCACAGACACGGACATaGAAGATAACCAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTPQTRT*KITSVH
Trigger: ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGG...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGACCACAGACACGGACATaGAAGATAACCAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRPQTRT*KITSVH
Trigger: ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGG...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCAAGGCAGTAAGTATGTaGGTCCACAGACACGGACAT +
Preference number: 4 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLKAVSM*VHRHGH
Trigger: ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTT...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGACAGCTTCAGCACAATTaGAGTTCCTGGGGGTATTCA +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRQLQHN*SSWGYS
Trigger: TGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTG...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGACTCTTCCTGTCCTCTaGCTGCCTTCTGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SYRHLLSSNVILLASIRRTLPVL*LPSEAC
Trigger: ACAAGCCTCAGAAGGCAGCCAGAGGACAGGAAGAGT...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCAGCTCAACCATGACCTaGTTACCAGGTGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTSSTMT*LPGVLS
Trigger: CGAGAGAACACCTGGTAACCAGGTCATGGTTGAGCT...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518672.5
3UTR CAA 72 bp ATCATCCTACGAACAGACAAATCAGCTTCAGCACAATaGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCG +
Preference number: 4 (lower is better)
Translates to: IILRTDKSASAQ*EFLGVFTSTLA
Trigger: CGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CAA 72 bp TGTGATCCTTCTGGCTTCTATAAGGAGGTATTGGTTTaGGTTCTCCTTTCTCACACGCTGGCTGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: CDPSGFYKEVLV*VLLSHTLADKA
Trigger: GGCTTTGTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTTATAGAAGCCAGAAGGATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATAAAAGCTTCCTCCTCTaGATCCGCACCATGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHKSFLL*IRTMLP
Trigger: GGGCAGCATGGTGCGGATTCAGAGGAGGAAGCTTTT...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR TCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGAAAACAGCCCAGTCATaGTGGGCTTTCCGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMKTAQS*WAFRGR
Trigger: TCTGCCTCGGAAAGCCCATCATGACTGGGCTGTTTT...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCAACTTATACTGTGCAATaGTCCTATAAAAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESTYTVQ*SYKSHR
Trigger: CCGATGGCTTTTATAGGATCATTGCACAGTATAAGT...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCAGAATCCAGTCGTCTaGTGTAACTTGCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVQNPVV*CNLPVP
Trigger: GGGAACTGGCAAGTTACATCAGACGACTGGATTCTG...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGGGTAAGCCCTTTTCCTaGAGCCTGATATTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: SYRHLLSSNVILLASIRRGKPFS*SLILAH
Trigger: GTGGGCTAATATCAGGCTTCAGGAAAAGGGCTTACC...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp ATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATTTGAAATCAGTCCTTaGATACTAGGCCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: IHFYSRAAQNVQAVQPESFEISP*ILGPKT
Trigger: AGTTTTGGGGCCTAGTATTCAAGGACTGATTTCAAA...TGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGACAAGACATTCTACTTTaGAGGGAAAATGGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRQDILL*RENGRR
Trigger: TCGCCTCCCATTTTCCCTTCAAAGTAGAATGTCTTG...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCCAGCCTTCAATACAATaGGAGCTGATGCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLQPSIQ*ELMLSK
Trigger: CTTGCTTAGCATCAGCTCTCATTGTATTGAAGGCTG...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCCGAGAGGAAGCAGCATaGAGTCTTCTTAGGCTATCA +
Preference number: 4 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTREEAA*SLLRLS
Trigger: TGATAGCCTAAGAAGACTGCATGCTGCTTCCTCTCG...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGATTAAGATGCGTAGGTaGTTCCTCCATTTTTGTATG +
Preference number: 4 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQIKMRR*FLHFCM
Trigger: CATACAAAAATGGAGGAAGCACCTACGCATCTTAAT...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCTCGTCTGATGTAACTTaGCAGTTCCCTGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVSSDVT*QFPGVR
Trigger: TCTCACCCCAGGGAACTGGCAAGTTACATCAGACGA...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATTCCTGGTTGACGTCTTaGACTCCCCATTTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: YRHLLSSNVILLASIRRYSWLTS*TPHFRS
Trigger: GGAACGGAAATGGGGAGTGCAAGACGTCAACCAGGA...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGCACCATACACTCAAATaGATCGATGTAATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQHHTLK*IDVIVL
Trigger: CAGGACAATTACATCGATGCATTTGAGTGTATGGTG...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTATCGTCTCCCTCCATTaGACAAGGAAAGTACTCACT +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTIVSLH*TRKVLT
Trigger: AGTGAGTACTTTCCTTGTGCAATGGAGGGAGACGAT...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCGAAATGACAGGAAATaGCCACAAACTGAATGCCTG +
Preference number: 4 (lower is better)
Translates to: RLHIILRTDKSASAQLEFRNDRK*PQTECL
Trigger: CAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCG...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCCCTTGTCTTCTGAGGTaGTCCAGTAGATGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLPCLLR*SSRCPR
Trigger: TCTGGGGCATCTACTGGAGCACCTCAGAAGACAAGG...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGGTCAATTCCCCCTCATaGCATGACACAGACATGAGC +
Preference number: 4 (lower is better)
Translates to: SYRHLLSSNVILLASIRRVNSPS*HDTDMS
Trigger: GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGAC...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGGTAGTTAGTGGCAAGTaGGAATGCCTGCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: SYRHLLSSNVILLASIRRVVSGK*ECLLNV
Trigger: CACGTTCAGCAGGCATTCCCACTTGCCACTAACTAC...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GTCTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGAGCCACCTTAGTGCCTaGGCTTCTTTCTTGGATTGT +
Preference number: 4 (lower is better)
Translates to: VSLHCTRKVLTLGEFPQKSHLSA*ASFLDC
Trigger: ACAATCCAAGAAAGAAGCCCAGGCACTAAGGTGGCT...CTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATACTCACTTACATCCCTaGAAACCAACAGATGGGATC +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHTHLHP*KPTDGI
Trigger: GATCCCATCTGTTGGTTTCCAGGGATGTAAGTGAGT...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCCACAATTGGAGTTCCTaGGGGTATTCACTTCTACTC +
Preference number: 4 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLHNWSS*GYSLLL
Trigger: GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTG...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATATCATGACACAACAGTaGCAACAGGCTTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHIMTQQ*QQAFSI
Trigger: GATACTAAAAGCCTGTTGCCACTGTTGTGTCATGAT...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCACTCTTCCTGTCCTCTaGCTGCCTTCTGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLTLPVL*LPSEAC
Trigger: ACAAGCCTCAGAAGGCAGCCAGAGGACAGGAAGAGT...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
3UTR CAA 72 bp ATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATaGGTTTTGGTTCTCCTTTCTCACACGCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: IQCDPSGFYKEV*VLVLLSHTLAD
Trigger: GTCAGCCAGCGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTTATAGAAGCCAGAAGGATCACATTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGCAGAATCCAGTCGTCTaGTGTAACTTGCCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMQNPVV*CNLPVP
Trigger: GGGAACTGGCAAGTTACATCAGACGACTGGATTCTG...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTCTGTTGAGAGTGAGGTaGGTATCAAGAATCTATAGC +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTLLRVR*VSRIYS
Trigger: GCTATAGATTCTTGATACTCACCTCACTCTCAACAG...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACCCAGGCTGTCCAGCCTaGATCATAAGCATAGCAATT +
Preference number: 4 (lower is better)
Translates to: EYQESIARSSPSIAQGKYPGCPA*IISIAI
Trigger: AATTGCTATGCTTATGATTCAGGCTGGACAGCCTGG...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCCAGCCTTCAATACAATaGGAGCTGATGCTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTQPSIQ*ELMLSK
Trigger: CTTGCTTAGCATCAGCTCTCATTGTATTGAAGGCTG...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGAATGTTGATGAACAATaGAGAATGTTACACAGGGGA +
Preference number: 4 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQNVDEQ*RMLHRG
Trigger: TCCCCTGTGTAACATTCTTCATTGTTCATCAACATT...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327671.10
CDS-3UTR GCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATATTAAGATGCGTAGGTaGTTCCTCCATTTTTGTATG +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHIKMRR*FLHFCM
Trigger: CATACAAAAATGGAGGAAGCACCTACGCATCTTAAT...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATAGAAATGAATTAAGATaGGTAGGTGCTTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHRNELR*VGASSI
Trigger: AATGGAGGAAGCACCTACGCATCTTAATTCATTTCT...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGATGTTCATGCTCGGCTaGAGGATACCAGGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMMFMLG*RIPGLP
Trigger: TGGCAAACCTGGTATCCTGCAGCCGAGCATGAACAT...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATGACAGAGGGCTAACCTaGTTACCAGGTGTTCTCTCG +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHDRGLT*LPGVLS
Trigger: CGAGAGAACACCTGGTAACCAGGTTAGCCCTCTGTC...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000524021.1
CDS-3UTR CCA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCAGAAGAGGAATGCTTTaGTCATGTGATGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: RLHIILRTDKSASAQLEFRRGML*SCDDGG
Trigger: ACCTCCATCATCACATGACCAAAGCATTCCTCTTCT...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATAGAAGAGGAATGCTTTaGTCATGTGATGATGGAGGT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHRRGML*SCDDGG
Trigger: ACCTCCATCATCACATGACCAAAGCATTCCTCTTCT...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp GATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGAGCGAACAAGGTGATCACTaGTTTATGAAAGAGCTTATA +
Preference number: 4 (lower is better)
Translates to: DAKQALVNSPSCHDTDMSEQGDH*FMKELI
Trigger: TATAAGCTCTTTCATAAACCAGTGATCACCTTGTTC...GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACGAACAAGGTGATCACTaGTTTATGAAAGAGCTTATA +
Preference number: 4 (lower is better)
Translates to: RADAKQALVNSPSCHDTDEQGDH*FMKELI
Trigger: TATAAGCTCTTTCATAAACCAGTGATCACCTTGTTC...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGGTAGTTAGTGGCAAGTaGGAATGCCTGCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMVVSGK*ECLLNV
Trigger: CACGTTCAGCAGGCATTCCCACTTGCCACTAACTAC...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGGGCATCCATAGAGGCTaGATTTTTCAGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMGIHRG*IFQLLR
Trigger: CCTCAGCAGCTGAAAAATCCAGCCTCTATGGATGCC...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTACCCCCAGTTTCAGTaGCCTCCAGAACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMYPQFQ*PPELLS
Trigger: ACTGAGAAGTTCTGGAGGCCACTGAAACTGGGGGTA...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TTCCCTATAGCAGGATCCGAAATGACAGGAAATGCCCACAAACTGAATGCCTGTAGCACTTTTGTTACTTaGAAGCCAGTCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: FPIAGSEMTGNAHKLNACSTFVT*KPVCDA
Trigger: AGCATCACAGACTGGCTTCCAAGTAACAAAAGTGCT...ACAGGCATTCAGTTTGTGGGCATTTCCTGTCATTTCGGATCCTGCTATAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCAACTTGCCAGTTCCCTaGGGTGAGAAAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLNLPVP*GEKILI
Trigger: TATCAGAATTTTCTCACCCCAGGGAACTGGCAAGTT...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAAACTTGCCAGTTCCCTaGGGTGAGAAAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRNLPVP*GEKILI
Trigger: TATCAGAATTTTCTCACCCCAGGGAACTGGCAAGTT...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGAGAAAGCAAACACTGTaGGCTCTGGGCAACTCAGGT +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMRKQTL*ALGNSG
Trigger: ACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCT...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATTGGATTGTTCAAAGCTaGAAATCCACATCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHWIVQS*KSTSLA
Trigger: TGCGAGAGATGTGGATTTCCAGCTTTGAACAATCCA...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCAGCCACCTTAGTGCCTaGGCTTCTTTCTTGGATTGT +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVSHLSA*ASFLDC
Trigger: ACAATCCAAGAAAGAAGCCCAGGCACTAAGGTGGCT...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATCTCCCCTCCCTCACATaGAAAGAAAACATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: YRHLLSSNVILLASIRRYLPSLT*KENMSQ
Trigger: CTGGCTCATGTTTTCTTTCCATGTGAGGGAGGGGAG...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGCTCCCCTCCCTCACATaGAAAGAAAACATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMLPSLT*KENMSQ
Trigger: CTGGCTCATGTTTTCTTTCCATGTGAGGGAGGGGAG...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGATTTTTCAGCTGCTaGGGGAGGTCTTTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLGFFSC*GRSLFR
Trigger: ACGAAACAAAGACCTCCCTCAGCAGCTGAAAAATCC...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GTCTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGTCCAGAACTTCTCAGTaGTGTAGTCATCACAAACTG +
Preference number: 4 (lower is better)
Translates to: VSLHCTRKVLTLGEFPQKSRTSQ*CSHHKL
Trigger: CAGTTTGTGATGACTACATCACTGAGAAGTTCTGGA...CTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGCCAGTTCCCTGGGGTaGGAAAATTCTGATACAAGA +
Preference number: 4 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLASSLG*ENSDTR
Trigger: TCTTGTATCAGAATTTTCTCACCCCAGGGAACTGGC...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATGGTAAGCCCTTTTCCTaGAGCCTGATATTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHGKPFS*SLILAH
Trigger: GTGGGCTAATATCAGGCTTCAGGAAAAGGGCTTACC...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATTTTGAAATCAGTCCTTaGATACTAGGCCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHFEISP*ILGPKT
Trigger: AGTTTTGGGGCCTAGTATTCAAGGACTGATTTCAAA...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAACCATAGAAGAGGAATaGTTTGGTCATGTGATGATG +
Preference number: 4 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRTIEEE*FGHVMM
Trigger: CATCATCACATGACCAAAGCATTCCTCTTCTATGGT...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATGCTGTCAGAAGTCGCTaGTTAGAGATCTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHAVRSR*LEISPF
Trigger: GAAGGGTGAGATCTCTAACCAGCGACTTCTGACAGC...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCCTGGGCTTCTTTCTTaGATTGTTCAAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLPGLLS*IVQSWK
Trigger: TTTCCAGCTTTGAACAATCCAAGAAAGAAGCCCAGG...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp TTCCAAGACCAGCCCAATCACTTCTTTTTGGATGCAAAAACTAAGGCCGATGGACCTGGGCTTCTTTCTTaGATTGTTCAAAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: FQDQPNHFFLDAKTKADGPGLLS*IVQSWK
Trigger: TTTCCAGCTTTGAACAATCCAAGAAAGAAGCCCAGG...TCCATCGGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGGGCTGGTCTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGTTATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGCTGGAAACCAACAGATaGGATCTCTCATTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SYRHLLSSNVILLASIRRLETNR*DLSLPS
Trigger: ACTTGGCAATGAGAGATCCCATCTGTTGGTTTCCAG...CCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCATCATGACACAACAGTaGCAACAGGCTTTTAGTATC +
Preference number: 4 (lower is better)
Translates to: RLHIILRTDKSASAQLEFIMTQQ*QQAFSI
Trigger: GATACTAAAAGCCTGTTGCCACTGTTGTGTCATGAT...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCCAATCACTTCTTTTTaGATGCAAAAACTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RLHIILRTDKSASAQLEFPITSF*MQKLRP
Trigger: CGGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGG...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATGGATTTTTCAGCTGCTaGGGGAGGTCTTTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHGFFSC*GRSLFR
Trigger: ACGAAACAAAGACCTCCCTCAGCAGCTGAAAAATCC...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTTTTGAAATCAGTCCTTaGATACTAGGCCCCAAAACT +
Preference number: 4 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLFEISP*ILGPKT
Trigger: AGTTTTGGGGCCTAGTATTCAAGGACTGATTTCAAA...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACAGTACTCACTCTAGGTaGATTTCCACAAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: EYQESIARSSPSIAQGKYSTHSR*ISTKGS
Trigger: ACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACT...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGCAAGACATTCTACTTTaGAGGGAAAATGGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMQDILL*RENGRR
Trigger: TCGCCTCCCATTTTCCCTTCAAAGTAGAATGTCTTG...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp CTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTATTAAGATGCGTAGGTaGTTCCTCCATTTTTGTATG +
Preference number: 4 (lower is better)
Translates to: LRTDKSASAQLEFLGVFTIKMRR*FLHFCM
Trigger: CATACAAAAATGGAGGAAGCACCTACGCATCTTAAT...AGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATAGCCACCTTAGTGCCTaGGCTTCTTTCTTGGATTGT +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHSHLSA*ASFLDC
Trigger: ACAATCCAAGAAAGAAGCCCAGGCACTAAGGTGGCT...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATCCACAGACACGGACATaGAAGATAACCAGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHPQTRT*KITSVH
Trigger: ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGG...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATAAGGCAGTAAGTATGTaGGTCCACAGACACGGACAT +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHKAVSM*VHRHGH
Trigger: ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTT...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATACTCACTTACATCCCTaGAAACCAACAGATGGGATC +
Preference number: 4 (lower is better)
Translates to: YRHLLSSNVILLASIRRYTHLHP*KPTDGI
Trigger: GATCCCATCTGTTGGTTTCCAGGGATGTAAGTGAGT...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATCAGCTTCAGCACAATTaGAGTTCCTGGGGGTATTCA +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHQLQHN*SSWGYS
Trigger: TGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTG...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp TTCCAAGACCAGCCCAATCACTTCTTTTTGGATGCAAAAACTAAGGCCGATGGAAGAAATGAATTAAGATaGGTAGGTGCTTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: FQDQPNHFFLDAKTKADGRNELR*VGASSI
Trigger: AATGGAGGAAGCACCTACGCATCTTAATTCATTTCT...TCCATCGGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGGGCTGGTCTTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR GCA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACCATACACTCAAATaGATCGATGTAATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVHHTLK*IDVIVL
Trigger: CAGGACAATTACATCGATGCATTTGAGTGTATGGTG...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGAGCACTTTTGTTACTTaGAAGCCAGTCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMSTFVT*KPVCDA
Trigger: AGCATCACAGACTGGCTTCCAAGTAACAAAAGTGCT...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATAACTTGCCAGTTCCCTaGGGTGAGAAAATTCTGATA +
Preference number: 4 (lower is better)
Translates to: YRHLLSSNVILLASIRRYNLPVP*GEKILI
Trigger: TATCAGAATTTTCTCACCCCAGGGAACTGGCAAGTT...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACCCAATCACTTCTTTTTaGATGCAAAAACTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: EYQESIARSSPSIAQGKYPITSF*MQKLRP
Trigger: CGGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGG...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATACTTATACTGTGCAATaGTCCTATAAAAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: YRHLLSSNVILLASIRRYTYTVQ*SYKSHR
Trigger: CCGATGGCTTTTATAGGATCATTGCACAGTATAAGT...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR TCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATAGTACTCACTCTAGGTaGATTTCCACAAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHSTHSR*ISTKGS
Trigger: ACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACT...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCCACCATACACTCAAATaGATCGATGTAATTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLHHTLK*IDVIVL
Trigger: CAGGACAATTACATCGATGCATTTGAGTGTATGGTG...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATTGGATTGTTCAAAGCTaGAAATCCACATCTCTCGCA +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHWIVQS*KSTSLA
Trigger: TGCGAGAGATGTGGATTTCCAGCTTTGAACAATCCA...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR TCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATACTTATACTGTGCAATaGTCCTATAAAAGCCATCGG +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHTYTVQ*SYKSHR
Trigger: CCGATGGCTTTTATAGGATCATTGCACAGTATAAGT...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGAGAAATGAATTAAGATaGGTAGGTGCTTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMRNELR*VGASSI
Trigger: AATGGAGGAAGCACCTACGCATCTTAATTCATTTCT...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR GCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATACCATAGAAGAGGAATaGTTTGGTCATGTGATGATG +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHTIEEE*FGHVMM
Trigger: CATCATCACATGACCAAAGCATTCCTCTTCTATGGT...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CCA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATGAACAAGGTGATCACTaGTTTATGAAAGAGCTTATA +
Preference number: 4 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHEQGDH*FMKELI
Trigger: TATAAGCTCTTTCATAAACCAGTGATCACCTTGTTC...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS CCA 90 bp CCGCACCATGCTGCCCTGCCCTGGGTGACTGACAGAGGGCTAACCTaGTTACCAGGTGTTCTCTCGTCAGCCCAGAGCCCGAGACAACTT +
Preference number: 5 (lower is better)
Translates to: PHHAALPWVTDRGLT*LPGVLSSAQSPRQL
Trigger: AAGTTGTCTCGGGCTCTGGGCTGACGAGAGAACACCTGGTAACCAGGTTAGCCCTCTGTCAGTCACCCAGGGCAGGGCAGCATGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS TCA 90 bp GCTTCCTCCTCTGAATCCGCACCATGCTGCCCTGCCCTGGGTGACTaGCAGAGGGCTAACCTGGTTACCAGGTGTTCTCTCGTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: ASSSESAPCCPALGD*QRANLVTRCSLVSP
Trigger: TGGGCTGACGAGAGAACACCTGGTAACCAGGTTAGCCCTCTGTCAGTCACCCAGGGCAGGGCAGCATGGTGCGGATTCAGAGGAGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS GCA 90 bp GAGTGTGACAAGCAGAAAGACGGTGGCTGTGACGCACAGGCAAGATaGCAAAAGCTTCCTCCTCTGAATCCGCACCATGCTGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: ECDKQKDGGCDAQAR*QKLPPLNPHHAALP
Trigger: GGGCAGGGCAGCATGGTGCGGATTCAGAGGAGGAAGCTTTTGGCATCTTGCCTGTGCGTCACAGCCACCGTCTTTCTGCTTGTCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000520503.1
ENST00000520767.5
CDS CCA 90 bp CTCGTCAGCCCAGAGCCCGAGACAACTTCACATGGAAGAACCATCTaGGCGCCAATTTCCTGCACTGCCATTCCTGCTGGGACCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LVSPEPETTSHGRTI*APISCTAIPAGTRS
Trigger: AGACCTGGTCCCAGCAGGAATGGCAGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATGTGAAGTTGTCTCGGGCTCTGGGCTGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000518672.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS CCA 90 bp TGCCAAAAGCTTCCTCCTCTGAATCCGCACCATGCTGCCCTGCCCTaGGTGACTGACAGAGGGCTAACCTGGTTACCAGGTGTTCTCTCG +
Preference number: 5 (lower is better)
Translates to: CQKLPPLNPHHAALP*VTDRGLTWLPGVLS
Trigger: CGAGAGAACACCTGGTAACCAGGTTAGCCCTCTGTCAGTCACCCAGGGCAGGGCAGCATGGTGCGGATTCAGAGGAGGAAGCTTTTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS CCA 90 bp TACCAGGTGTTCTCTCGTCAGCCCAGAGCCCGAGACAACTTCACATaGAAGAACCATCTGGGCGCCAATTTCCTGCACTGCCATTCCTGC +
Preference number: 5 (lower is better)
Translates to: YQVFSRQPRARDNFT*KNHLGANFLHCHSC
Trigger: GCAGGAATGGCAGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATGTGAAGTTGTCTCGGGCTCTGGGCTGACGAGAGAACACCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000518672.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS-3UTR CAA 90 bp GCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGGTGAGAGGGTCTGGCTaGGCATCGAGAGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ADAKQALVNSPSCHDTDMVRGSG*ASRGSS
Trigger: GCTGCTTCCTCTCGATGCCAAGCCAGACCCTCTCAC...CATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS CCA 90 bp CGGAGTGGTGAGAAAGCAAACACTGTGGGCTCTGGGCAACTCAGGTaGGTATCTTCTGCCTCCCATCTTTTGGGTGGTAAGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RSGEKANTVGSGQLR*VSSASHLLGGKPFS
Trigger: GGAAAAGGGCTTACCACCCAAAAGATGGGAGGCAGAAGATACCCACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCTCACCACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327671.10
ENST00000517942.1
ENST00000518672.5
ENST00000524021.1
CDS CCA 90 bp AAGAGCTCAAAGGTGGAGTCCGGAGTGGTGAGAAAGCAAACACTGTaGGCTCTGGGCAACTCAGGTGGGTATCTTCTGCCTCCCATCTTT +
Preference number: 5 (lower is better)
Translates to: KSSKVESGVVRKQTL*ALGNSGGYLLPPIF
Trigger: AAAGATGGGAGGCAGAAGATACCCACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCTCACCACTCCGGACTCCACCTTTGAGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517891.1
ENST00000517942.1
ENST00000518672.5
ENST00000519440.5
ENST00000524021.1
CDS CCA 90 bp CGGAGTGGTGAGAAAGCAAACACTGTGGGCTCTGGGCAACTCAGGTaGGTATCTTCTGCCTCCCATCTTTTGGGTGGTAAGCCCCTATTT +
Preference number: 5 (lower is better)
Translates to: RSGEKANTVGSGQLR*VSSASHLLGGKPLF
Trigger: AAATAGGGGCTTACCACCCAAAAGATGGGAGGCAGAAGATACCCACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCTCACCACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517891.1
ENST00000519440.5
CDS-3UTR CAA 90 bp AATGCCTGTGGCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAAGTCCTGGTTGACGTCTaGCACTCCCCATTTCCGTTC +
Preference number: 5 (lower is better)
Translates to: NACGCHCDRLHIILRTDKVLVDV*HSPFPF
Trigger: GAACGGAAATGGGGAGTGCAAGACGTCAACCAGGAC...TTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGCCACAGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAGTGAGAGGGTCTGGCTaGGCATCGAGAGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRVRGSG*ASRGSS
Trigger: GCTGCTTCCTCTCGATGCCAAGCCAGACCCTCTCAC...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS GCA 90 bp CGGAGAAACAGGCACTTTCTTCACAGGGCAGCAGGATGGAGTGAGTaGCAGCAGGGGAAATGCCAGATGCTTATAAAACCATCAGATCTC +
Preference number: 5 (lower is better)
Translates to: RRNRHFLHRAAGWSE*QQGKCQMLIKPSDL
Trigger: GAGATCTGATGGTTTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCACTCCATCCTGCTGCCCTGTGAAGAAAGTGCCTGTTTCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416169.5
CDS TCA 90 bp CAGCCTGCTGGCTCTATGCCCACCTTTGATTTGCTTACCTTTTCCTaGAGCCTGATATTAGCCCACACCTTGGTGCACACCATACACTCA +
Preference number: 5 (lower is better)
Translates to: QPAGSMPTFDLLTFS*SLILAHTLVHTIHS
Trigger: TGAGTGTATGGTGTGCACCAAGGTGTGGGCTAATATCAGGCTTCAGGAAAAGGTAAGCAAATCAAAGGTGGGCATAGAGCCAGCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520767.5
CDS CCA 90 bp ACTAGGTATCGGAGTGACTTCAGGACTTCAATGCTCTCCAAGTATTaGGTAGTTAGTGGCAAGTGGGAATGCCTGCTGAACGTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: TRYRSDFRTSMLSKY*VVSGKWECLLNVAV
Trigger: CACTGCCACGTTCAGCAGGCATTCCCACTTGCCACTAACTACCCAATACTTGGAGAGCATTGAAGTCCTGAAGTCACTCCGATACCTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS CCA 90 bp TCACAGTTCTGCATTGCTTGGGAGGCCTCAGGAAATTTACAATCATaGCAGAAGGCAACGGAGAAACAGGCACTTTCTTCACAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SQFCIAWEASGNLQS*QKATEKQALSSQGS
Trigger: GCTGCCCTGTGAAGAAAGTGCCTGTTTCTCCGTTGCCTTCTGCCATGATTGTAAATTTCCTGAGGCCTCCCAAGCAATGCAGAACTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416169.5
CDS-3UTR CAA 90 bp ACTCTCGCGCTGCTCAAAATGTCCAGGCTGTCCAGCCTGAATCATAAGCATAGCATATTAGCCCACACCTaGGTGCACACCATACACTCA +
Preference number: 5 (lower is better)
Translates to: TLALLKMSRLSSLNHKHSILAHT*VHTIHS
Trigger: TGAGTGTATGGTGTGCACCAAGGTGTGGGCTAATAT...GCTATGCTTATGATTCAGGCTGGACAGCCTGGACATTTTGAGCAGCGCGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp GATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACATGAGCGCCTGGGCTTCTTTCTaGGATTGTTCAAAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: DAKQALVNSPSCHDTDMSAWASF*DCSKLE
Trigger: TTCCAGCTTTGAACAATCCAAGAAAGAAGCCCAGGC...GCTCATGTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS TCA 90 bp CAGAGAACATCAAGATGGCCAGCCTGCTGGCTCTATGCCCACCTTTaGTTTGCTTACCTTTTCCTGAAGCCTGATATTAGCCCACACCTT +
Preference number: 5 (lower is better)
Translates to: QRTSRWPACWLYAHL*FAYLFLKPDISPHL
Trigger: AAGGTGTGGGCTAATATCAGGCTTCAGGAAAAGGTAAGCAAATCAAAGGTGGGCATAGAGCCAGCAGGCTGGCCATCTTGATGTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520767.5
CDS-3UTR CAA 90 bp GTCTCCCTCCATTGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGTCCTGGTTGACGTCTaGCACTCCCCATTTCCGTTC +
Preference number: 5 (lower is better)
Translates to: VSLHCTRKVLTLGEFPQKVLVDV*HSPFPF
Trigger: GAACGGAAATGGGGAGTGCAAGACGTCAACCAGGAC...CTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCAATGGAGGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS GCA 90 bp AAGCCTGATATTAGCCCACACCTTGGTGCACACCATACACTCAAATaGATCGATGTAATTGTCCTGGTTGACGTCTTGCACTCCCCATTT +
Preference number: 5 (lower is better)
Translates to: KPDISPHLGAHHTLK*IDVIVLVDVLHSPF
Trigger: AAATGGGGAGTGCAAGACGTCAACCAGGACAATTACATCGATGCATTTGAGTGTATGGTGTGCACCAAGGTGTGGGCTAATATCAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517942.1
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS GCA 90 bp AAACAAGGGAGAAAGGCGAAAGTCCTGCTTACCATAGAAGAGGAATaGTTTGGTCATGTGATGATGGAGGTAGGTCCGGTTGATGGTGAA +
Preference number: 5 (lower is better)
Translates to: KQGRKAKVLLTIEEE*FGHVMMEVGPVDGE
Trigger: TTCACCATCAACCGGACCTACCTCCATCATCACATGACCAAAGCATTCCTCTTCTATGGTAAGCAGGACTTTCGCCTTTCTCCCTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416169.5
ENST00000520935.1
CDS-3UTR CAA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGGTCCTGGTTGACGTCTaGCACTCCCCATTTCCGTTC +
Preference number: 5 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMVLVDV*HSPFPF
Trigger: GAACGGAAATGGGGAGTGCAAGACGTCAACCAGGAC...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CAA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAGCCTGGGCTTCTTTCTaGGATTGTTCAAAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRAWASF*DCSKLE
Trigger: TTCCAGCTTTGAACAATCCAAGAAAGAAGCCCAGGC...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CAA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTGATCGTCTCCCTCCATaGCACAAGGAAAGTACTCAC +
Preference number: 5 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLDRLPP*HKESTH
Trigger: GTGAGTACTTTCCTTGTGCAATGGAGGGAGACGATC...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTTCAGCTTCAGCACAATaGGAGTTCCTGGGGGTATTC +
Preference number: 5 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLSASAQ*EFLGVF
Trigger: GAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGA...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS TCA 90 bp CCCAGCTCAACCATGACCTTCTATTTCAATGACTTTGTTTCTGCCTaGCACGTCCATTCACTAAACCTCAGTTTCACCTGGAGTGTGACA +
Preference number: 5 (lower is better)
Translates to: PSSTMTFYFNDFVSA*HVHSLNLSFTWSVT
Trigger: TGTCACACTCCAGGTGAAACTGAGGTTTAGTGAATGGACGTGTCAGGCAGAAACAAAGTCATTGAAATAGAAGGTCATGGTTGAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520503.1
CDS-3UTR CAA 90 bp GGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATAACCAGTGTCCATTTTCTAAGCTTGTTTTaGGACTGCAAAGGAACTAGG +
Preference number: 5 (lower is better)
Translates to: GSKYVGPQTRTWKITSVHFLSLF*DCKGTR
Trigger: CCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAA...ATGGACACTGGTTATCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CAA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTATATTAGCCCACACCTaGGTGCACACCATACACTCA +
Preference number: 5 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLILAHT*VHTIHS
Trigger: TGAGTGTATGGTGTGCACCAAGGTGTGGGCTAATAT...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp GAGTATCAAGAATCTATAGCTAGATCGTCTCCCTCCATTGCACAAGGAAAGTACGATCGTCTCCCTCCATaGCACAAGGAAAGTACTCAC +
Preference number: 5 (lower is better)
Translates to: EYQESIARSSPSIAQGKYDRLPP*HKESTH
Trigger: GTGAGTACTTTCCTTGTGCAATGGAGGGAGACGATC...GTACTTTCCTTGTGCAATGGAGGGAGACGATCTAGCTATAGATTCTTGATACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACAGATGGGATCTCTCATaGCCAAGTTCTAATGTATTT +
Preference number: 5 (lower is better)
Translates to: RADAKQALVNSPSCHDTDRWDLS*PSSNVF
Trigger: AAATACATTAGAACTTGGCAATGAGAGATCCCATCT...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGAACAAGACATTCTACTTaGAAGGGAAAATGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRTRHST*KGKWEA
Trigger: CGCCTCCCATTTTCCCTTCAAAGTAGAATGTCTTGT...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp AGAGCTGATGCTAAGCAAGCACTCGTCAATTCCCCCTCATGCCATGACACAGACTTCTATAAGGAGGTATaGGTTTTGGTTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RADAKQALVNSPSCHDTDFYKEV*VLVLLS
Trigger: AGAAAGGAGAACCAAAACCAATACCTCCTTATAGAA...GTCTGTGTCATGGCATGAGGGGGAATTGACGAGTGCTTGCTTAGCATCAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp GCTGCCACTGTGACAGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGTTCTATAAGGAGGTATaGGTTTTGGTTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: AATVTGCTSSYEQTNQLQFYKEV*VLVLLS
Trigger: AGAAAGGAGAACCAAAACCAATACCTCCTTATAGAA...CTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCTGTCACAGTGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS GCA 90 bp ACATACACCAGCGGAGCAAGTCTTTTTCTAAGCTTGTTTTTGGACTaGAAAGGAACTAGGTATCGGAGTGACTTCAGGACTTCAATGCTC +
Preference number: 5 (lower is better)
Translates to: TYTSGASLFLSLFLD*KGTRYRSDFRTSML
Trigger: GAGCATTGAAGTCCTGAAGTCACTCCGATACCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGACTTGCTCCGCTGGTGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS-3UTR CAA 90 bp ATTGGAGTTCCTGGGGGTATTCACTTCTACTCTCGCGCTGCTCAAAATGTCCAGAGTCTTTTTCTAAGCTaGTTTTTGGACTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: IGVPGGIHFYSRAAQNVQSLFLS*FLDCKG
Trigger: TCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGACT...CTGGACATTTTGAGCAGCGCGAGAGTAGAAGTGAATACCCCCAGGAACTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp TACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTTGCAGGATACCAGGTTaGCCAAATACCAATAAGCTG +
Preference number: 5 (lower is better)
Translates to: YEQTNQLQHNWSSWGYSLCRIPG*PNTNKL
Trigger: CAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCA...AAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCTCAGCTTCAGCACAATaGGAGTTCCTGGGGGTATTC +
Preference number: 5 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLSASAQ*EFLGVF
Trigger: GAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGA...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp TTCCAAGACCAGCCCAATCACTTCTTTTTGGATGCAAAAACTAAGGCCGATGGAAAGGAGGTATTGGTTTaGGTTCTCCTTTCTCACACG +
Preference number: 5 (lower is better)
Translates to: FQDQPNHFFLDAKTKADGKEVLV*VLLSHT
Trigger: CGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTT...TCCATCGGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGGGCTGGTCTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp CTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTGCAGGATACCAAGGAGGTATTGGTTTaGGTTCTCCTTTCTCACACG +
Preference number: 5 (lower is better)
Translates to: LSLPSSNVFHVHARLQDTKEVLV*VLLSHT
Trigger: CGTGTGAGAAAGGAGAACCAAAACCAATACCTCCTT...GGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCCCCAATCACTTCTTTTaGGATGCAAAAACTAAGGCC +
Preference number: 5 (lower is better)
Translates to: RLHIILRTDKSASAQLEFPNHFF*DAKTKA
Trigger: GGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGGG...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGACCCAATCACTTCTTTTaGGATGCAAAAACTAAGGCC +
Preference number: 5 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRPNHFF*DAKTKA
Trigger: GGCCTTAGTTTTTGCATCCAAAAAGAAGTGATTGGG...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS GCA 90 bp ATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTaGAGGATACCAGGTTTGCCAAATACCAATAAGCTTAGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: ISHCQVLMYFMFMLG*RIPGLPNTNKLSAW
Trigger: CCAGGCACTAAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517942.1
ENST00000519440.5
CDS-3UTR CAA 90 bp AGGCTGCACATCATCCTACGAACAGACAAATCAGCTTCAGCACAATTGGAGTTCTTTCTAAGCTTGTTTTaGGACTGCAAAGGAACTAGG +
Preference number: 5 (lower is better)
Translates to: RLHIILRTDKSASAQLEFFLSLF*DCKGTR
Trigger: CCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAA...GAACTCCAATTGTGCTGAAGCTGATTTGTCTGTTCGTAGGATGATGTGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp GAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATGGAAGATTTCTAAGCTTGTTTTaGGACTGCAAAGGAACTAGG +
Preference number: 5 (lower is better)
Translates to: EFPQKAVSMWVHRHGHGRFLSLF*DCKGTR
Trigger: CCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAA...TCTTCCATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CAA 90 bp CAGACAAATCAGCTTCAGCACAATTGGAGTTCCTGGGGGTATTCACTTCTACTCACAAGAATAGCACTTTaGTTACTTGGAAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: QTNQLQHNWSSWGYSLLLTRIAL*LLGSQS
Trigger: AGACTGGCTTCCAAGTAACAAAAGTGCTATTCTTGT...GAGTAGAAGTGAATACCCCCAGGAACTCCAATTGTGCTGAAGCTGATTTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp TGCACAAGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGATATTAGCCCACACCTaGGTGCACACCATACACTCA +
Preference number: 5 (lower is better)
Translates to: CTRKVLTLGEFPQKAVSMILAHT*VHTIHS
Trigger: TGAGTGTATGGTGTGCACCAAGGTGTGGGCTAATAT...CATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCTTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CAA 90 bp CTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCCACAGACACGGACATAGTCTTTTTCTAAGCTaGTTTTTGGACTGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LGEFPQKAVSMWVHRHGHSLFLS*FLDCKG
Trigger: TCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGACT...ATGTCCGTGTCTGTGGACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CAA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCTGCAGGATACCAGGTTaGCCAAATACCAATAAGCTG +
Preference number: 5 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLCRIPG*PNTNKL
Trigger: CAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCA...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp CCAACAGATGGGATCTCTCATTGCCAAGTTCTAATGTATTTCATGTTCATGCTCACAAGACATTCTACTTaGAAGGGAAAATGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: PTDGISHCQVLMYFMFMLTRHST*KGKWEA
Trigger: CGCCTCCCATTTTCCCTTCAAAGTAGAATGTCTTGT...GAGCATGAACATGAAATACATTAGAACTTGGCAATGAGAGATCCCATCTGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp AGGAAAGTACTCACTCTAGGTGAATTTCCACAAAAGGCAGTAAGTATGTGGGTCACAAGAATAGCACTTTaGTTACTTGGAAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RKVLTLGEFPQKAVSMWVTRIAL*LLGSQS
Trigger: AGACTGGCTTCCAAGTAACAAAAGTGCTATTCTTGT...GACCCACATACTTACTGCCTTTTGTGGAAATTCACCTAGAGTGAGTACTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327671.10
ENST00000518672.5
ENST00000524021.1
CDS-3UTR CAA 90 bp GGCAACCTAGAAAATAAACCTCAAGAAGGCTCTAGTCTGTTTCATTCTGATCATAACAGCGTGCTTCCCTaGAATAACATACAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: GNLENKPQEGSSLFHSDHNSVLP*NNIQQF
Trigger: GAACTGCTGTATGTTATTCAAGGGAAGCACGCTGTT...ATGATCAGAATGAAACAGACTAGAGCCTTCTTGAGGTTTATTTTCTAGGTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327671.10
CDS-3UTR CAA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATACAAGAATAGCACTTTaGTTACTTGGAAGCCAGTCT +
Preference number: 5 (lower is better)
Translates to: YRHLLSSNVILLASIRRYTRIAL*LLGSQS
Trigger: AGACTGGCTTCCAAGTAACAAAAGTGCTATTCTTGT...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS-3UTR CAA 90 bp TATAGACACCTTCTCTCATCCAATGTGATCCTTCTGGCTTCTATAAGGAGGTATAGATGGGATCTCTCATaGCCAAGTTCTAATGTATTT +
Preference number: 5 (lower is better)
Translates to: YRHLLSSNVILLASIRRYRWDLS*PSSNVF
Trigger: AAATACATTAGAACTTGGCAATGAGAGATCCCATCT...ATACCTCCTTATAGAAGCCAGAAGGATCACATTGGATGAGAGAAGGTGTCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000518672.5
CDS CCA 72 bp GCTGCCCTGCCCTGGGTGACTGACAGAGGGCTAACCTaGTTACCAGGTGTTCTCTCGTCAGCCCAGAGCCCG +
Preference number: 6 (lower is better)
Translates to: AALPWVTDRGLT*LPGVLSSAQSP
Trigger: CGGGCTCTGGGCTGACGAGAGAACACCTGGTAACCAGGTTAGCCCTCTGTCAGTCACCCAGGGCAGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS GCA 72 bp AAAATTCTCGCGCGGAGCAGGGTTCGTCCCGCAGAATaGAGCGCAGCTTCCTTTCTCCCTATGAGCCCAAGC +
Preference number: 6 (lower is better)
Translates to: KILARSRVRPAE*SAASFLPMSPS
Trigger: GCTTGGGCTCATAGGGAGAAAGGAAGCTGCGCTGCATTCTGCGGGACGAACCCTGCTCCGCGCGAGAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327671.10
ENST00000520767.5
CDS CCA 72 bp CGGTTGATGGTGAAGAAACAAGCATCTGCTCCACATTaGCCTAACCTCCCAGTCTCCCCCGTCAGCGGGGAC +
Preference number: 6 (lower is better)
Translates to: RLMVKKQASAPH*PNLPVSPVSGD
Trigger: GTCCCCGCTGACGGGGGAGACTGGGAGGTTAGGCCAATGTGGAGCAGATGCTTGTTTCTTCACCATCAACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000520935.1
ENST00000524021.1
CDS CCA 72 bp CCAGAGCCCGAGACAACTTCACATGGAAGAACCATCTaGGCGCCAATTTCCTGCACTGCCATTCCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: PEPETTSHGRTI*APISCTAIPAG
Trigger: CCCAGCAGGAATGGCAGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATGTGAAGTTGTCTCGGGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000518672.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS GCA 72 bp ACATGGAAGAACCATCTGGGCGCCAATTTCCTGCACTaGCATTCCTGCTGGGACCAGGTCTCCATGAAGGAC +
Preference number: 6 (lower is better)
Translates to: TWKNHLGANFLH*HSCWDQVSMKD
Trigger: GTCCTTCATGGAGACCTGGTCCCAGCAGGAATGGCAGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000518672.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS CCA 72 bp TTCTCTCGTCAGCCCAGAGCCCGAGACAACTTCACATaGAAGAACCATCTGGGCGCCAATTTCCTGCACTGC +
Preference number: 6 (lower is better)
Translates to: FSRQPRARDNFT*KNHLGANFLHC
Trigger: GCAGTGCAGGAAATTGGCGCCCAGATGGTTCTTCCATGTGAAGTTGTCTCGGGCTCTGGGCTGACGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000518672.5
ENST00000520503.1
ENST00000520767.5
ENST00000524021.1
CDS CCA 72 bp AAGGTGGAGTCCGGAGTGGTGAGAAAGCAAACACTGTaGGCTCTGGGCAACTCAGGTGGGTATCTTCTGCCT +
Preference number: 6 (lower is better)
Translates to: KVESGVVRKQTL*ALGNSGGYLLP
Trigger: AGGCAGAAGATACCCACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCTCACCACTCCGGACTCCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517891.1
ENST00000517942.1
ENST00000518672.5
ENST00000519440.5
ENST00000524021.1
CDS GCA 72 bp AAGCAGAAAGACGGTGGCTGTGACGCACAGGCAAGATaGCAAAAGCTTCCTCCTCTGAATCCGCACCATGCT +
Preference number: 6 (lower is better)
Translates to: KQKDGGCDAQAR*QKLPPLNPHHA
Trigger: AGCATGGTGCGGATTCAGAGGAGGAAGCTTTTGGCATCTTGCCTGTGCGTCACAGCCACCGTCTTTCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327671.10
ENST00000416169.5
ENST00000520503.1
ENST00000520767.5
CDS CAA 72 bp GGGCAACTCAGGTGGGTATCTTCTGCCTCCCATCTTTaGGGTGGTAAGCCCCTATTTCCTTGCCTTCCCACT +
Preference number: 6 (lower is better)
Translates to: GQLRWVSSASHL*GGKPLFPCLPT
Trigger: AGTGGGAAGGCAAGGAAATAGGGGCTTACCACCCAAAAGATGGGAGGCAGAAGATACCCACCTGAGTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517891.1
ENST00000519440.5
CDS CCA 72 bp GAGAAAGCAAACACTGTGGGCTCTGGGCAACTCAGGTaGGTATCTTCTGCCTCCCATCTTTTGGGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: EKANTVGSGQLR*VSSASHLLGGK
Trigger: CTTACCACCCAAAAGATGGGAGGCAGAAGATACCCACCTGAGTTGCCCAGAGCCCACAGTGTTTGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517891.1
ENST00000517942.1
ENST00000518672.5
ENST00000519440.5
ENST00000524021.1
CDS CCA 72 bp CCCCATTTCCGTTCCCTGAGAGCTGTCAGAAGTCGCTaGTTAGAGATCTCACCCTTCAGCTTCCATTCTACA +
Preference number: 6 (lower is better)
Translates to: PHFRSLRAVRSR*LEISPFSFHST
Trigger: TGTAGAATGGAAGCTGAAGGGTGAGATCTCTAACCAGCGACTTCTGACAGCTCTCAGGGAACGGAAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517942.1
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS CAA 90 bp CACCATACACTCAAATGCATCGATGTAATTGTCCTGGTTGACGTCTaGCACTCCCCATTTCCGTTCCCTGAGAGCTGTCAGAAGTCGCTG +
Preference number: 6 (lower is better)
Translates to: HHTLKCIDVIVLVDV*HSPFPFPESCQKSL
Trigger: CAGCGACTTCTGACAGCTCTCAGGGAACGGAAATGGGGAGTGCAAGACGTCAACCAGGACAATTACATCGATGCATTTGAGTGTATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517942.1
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS TCA 72 bp AAACAGGCACTTTCTTCACAGGGCAGCAGGATGGAGTaGGTGCCAGCAGGGGAAATGCCAGATGCTTATAAA +
Preference number: 6 (lower is better)
Translates to: KQALSSQGSRME*VPAGEMPDAYK
Trigger: TTTATAAGCATCTGGCATTTCCCCTGCTGGCACTCACTCCATCCTGCTGCCCTGTGAAGAAAGTGCCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416169.5
CDS TCA 72 bp GGCTCTATGCCCACCTTTGATTTGCTTACCTTTTCCTaGAGCCTGATATTAGCCCACACCTTGGTGCACACC +
Preference number: 6 (lower is better)
Translates to: GSMPTFDLLTFS*SLILAHTLVHT
Trigger: GGTGTGCACCAAGGTGTGGGCTAATATCAGGCTTCAGGAAAAGGTAAGCAAATCAAAGGTGGGCATAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520767.5
CDS CCA 72 bp CGGAGTGACTTCAGGACTTCAATGCTCTCCAAGTATTaGGTAGTTAGTGGCAAGTGGGAATGCCTGCTGAAC +
Preference number: 6 (lower is better)
Translates to: RSDFRTSMLSKY*VVSGKWECLLN
Trigger: GTTCAGCAGGCATTCCCACTTGCCACTAACTACCCAATACTTGGAGAGCATTGAAGTCCTGAAGTCACTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS CAA 72 bp CTCAAATGCATCGATGTAATTGTCCTGGTTGACGTCTaGCACTCCCCATTTCCGTTCCCTGAGAGCTGTCAG +
Preference number: 6 (lower is better)
Translates to: LKCIDVIVLVDV*HSPFPFPESCQ
Trigger: CTGACAGCTCTCAGGGAACGGAAATGGGGAGTGCAAGACGTCAACCAGGACAATTACATCGATGCATTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517942.1
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS CCA 72 bp GGATCCGTAATATACAGGGACTACCCCCAGTTTCAGTaGCCTCCAGAACTTCTCAGTGATGTAGTCATCACA +
Preference number: 6 (lower is better)
Translates to: GSVIYRDYPQFQ*PPELLSDVVIT
Trigger: TGTGATGACTACATCACTGAGAAGTTCTGGAGGCCACTGAAACTGGGGGTAGTCCCTGTATATTACGGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS GCA 72 bp ATTAGCCCACACCTTGGTGCACACCATACACTCAAATaGATCGATGTAATTGTCCTGGTTGACGTCTTGCAC +
Preference number: 6 (lower is better)
Translates to: ISPHLGAHHTLK*IDVIVLVDVLH
Trigger: GTGCAAGACGTCAACCAGGACAATTACATCGATGCATTTGAGTGTATGGTGTGCACCAAGGTGTGGGCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000327671.10
ENST00000517942.1
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS GCA 72 bp AGAAAGGCGAAAGTCCTGCTTACCATAGAAGAGGAATaGTTTGGTCATGTGATGATGGAGGTAGGTCCGGTT +
Preference number: 6 (lower is better)
Translates to: RKAKVLLTIEEE*FGHVMMEVGPV
Trigger: AACCGGACCTACCTCCATCATCACATGACCAAAGCATTCCTCTTCTATGGTAAGCAGGACTTTCGCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416169.5
ENST00000520935.1
CDS CCA 72 bp TGCATTGCTTGGGAGGCCTCAGGAAATTTACAATCATaGCAGAAGGCAACGGAGAAACAGGCACTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: CIAWEASGNLQS*QKATEKQALSS
Trigger: TGAAGAAAGTGCCTGTTTCTCCGTTGCCTTCTGCCATGATTGTAAATTTCCTGAGGCCTCCCAAGCAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416169.5
CDS CAA 90 bp CAGTCTGACTGTACATACACCAGCGGAGCAAGTCTTTTTCTAAGCTaGTTTTTGGACTGCAAAGGAACTAGGTATCGGAGTGACTTCAGG +
Preference number: 6 (lower is better)
Translates to: QSDCTYTSGASLFLS*FLDCKGTRYRSDFR
Trigger: CCTGAAGTCACTCCGATACCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGACTTGCTCCGCTGGTGTATGTACAGTCAGACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS TCA 72 bp CTACCCCCAGTTTCAGTGGCCTCCAGAACTTCTCAGTaGTGTAGTCATCACAAACTGCATTCTCAAAAGCTA +
Preference number: 6 (lower is better)
Translates to: LPPVSVASRTSQ*CSHHKLHSQKL
Trigger: TAGCTTTTGAGAATGCAGTTTGTGATGACTACATCACTGAGAAGTTCTGGAGGCCACTGAAACTGGGGGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS CAA 72 bp TATTTCATGTTCATGCTCGGCTGCAGGATACCAGGTTaGCCAAATACCAATAAGCTTAGTGCCTGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: YFMFMLGCRIPG*PNTNKLSAWAS
Trigger: AGAAGCCCAGGCACTAAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCAGCCGAGCATGAACATGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517942.1
ENST00000519440.5
CDS CAA 90 bp GACTGTACATACACCAGCGGAGCAAGTCTTTTTCTAAGCTTGTTTTaGGACTGCAAAGGAACTAGGTATCGGAGTGACTTCAGGACTTCA +
Preference number: 6 (lower is better)
Translates to: DCTYTSGASLFLSLF*DCKGTRYRSDFRTS
Trigger: TGAAGTCCTGAAGTCACTCCGATACCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGACTTGCTCCGCTGGTGTATGTACAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS GCA 72 bp AGCGGAGCAAGTCTTTTTCTAAGCTTGTTTTTGGACTaGAAAGGAACTAGGTATCGGAGTGACTTCAGGACT +
Preference number: 6 (lower is better)
Translates to: SGASLFLSLFLD*KGTRYRSDFRT
Trigger: AGTCCTGAAGTCACTCCGATACCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGACTTGCTCCGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS CAA 72 bp TACACCAGCGGAGCAAGTCTTTTTCTAAGCTTGTTTTaGGACTGCAAAGGAACTAGGTATCGGAGTGACTTC +
Preference number: 6 (lower is better)
Translates to: YTSGASLFLSLF*DCKGTRYRSDF
Trigger: GAAGTCACTCCGATACCTAGTTCCTTTGCAGTCCAAAAACAAGCTTAGAAAAAGACTTGCTCCGCTGGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000327671.10
ENST00000518076.1
ENST00000518672.5
ENST00000520767.5
ENST00000524021.1
CDS TCA 72 bp ACCATGACCTTCTATTTCAATGACTTTGTTTCTGCCTaGCACGTCCATTCACTAAACCTCAGTTTCACCTGG +
Preference number: 6 (lower is better)
Translates to: TMTFYFNDFVSA*HVHSLNLSFTW
Trigger: CCAGGTGAAACTGAGGTTTAGTGAATGGACGTGTCAGGCAGAAACAAAGTCATTGAAATAGAAGGTCATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520503.1
CDS CCA 72 bp GAAAGAGGTTTAATTGACTCACAGTTCTGCATTGCTTaGGAGGCCTCAGGAAATTTACAATCATGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: ERGLIDSQFCIA*EASGNLQSWQK
Trigger: CTTCTGCCATGATTGTAAATTTCCTGAGGCCTCCCAAGCAATGCAGAACTGTGAGTCAATTAAACCTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416169.5
CDS GCA 72 bp TGCCAAGTTCTAATGTATTTCATGTTCATGCTCGGCTaGAGGATACCAGGTTTGCCAAATACCAATAAGCTT +
Preference number: 6 (lower is better)
Translates to: CQVLMYFMFMLG*RIPGLPNTNKL
Trigger: AAGCTTATTGGTATTTGGCAAACCTGGTATCCTGCAGCCGAGCATGAACATGAAATACATTAGAACTTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517942.1
ENST00000519440.5