Pregenerated sensors for FUS (Homo sapiens)
Ensembl gene IDs: ENSG00000089280Ensembl transcript IDs: ENST00000254108.12, ENST00000380244.7, ENST00000483853.1, ENST00000487045.6, ENST00000487509.6, ENST00000487974.1, ENST00000564766.1, ENST00000566605.5, ENST00000568685.1, ENST00000569760.5, ENST00000570090.1
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCCACCACCTCCACTGGGAAATCCTCCTCGGCCACCACCACCACTaGCACCACCTCCATAGCCTCCACGGCCCATGGGTCCTCCTCGCC | + |
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Preference number: 1 (lower is better) Translates to: RHHLHWEILLGHHHH*HHLHSLHGPWVLLA Trigger: GGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGAGGTGGTGGCAGTGGTGGTGGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR CCA 90 bp | TCCAGTCACCAGCTCGCTGCTGTCCTCCACCGCCACCACCTCCACTaGGAAATCCTCCTCGGCCACCACCACCACTGCCACCACCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: SSHQLAAVLHRHHLH*EILLGHHHHCHHLH Trigger: ATGGAGGTGGTGGCAGTGGTGGTGGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCAGCGAGCTGGTGACTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR GCA 90 bp | ATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCTaGTGTCCTCCACCGCCACCACCTCCACTGGGAAATCCTCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: IFSQVGLGHFQSPAR*CPPPPPPPLGNPPR Trigger: CCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCAGCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR TCA 90 bp | ACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATaGGACCTTGATAGGATTTCCGGAGAATTCTTTACCATCAAACCA | + |
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Preference number: 1 (lower is better) Translates to: TIATTPIKVCPASSK*DLDRISGEFFTIKP Trigger: TGGTTTGATGGTAAAGAATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR-3UTR GCA 90 bp | TCCATAGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTTTCTCACCCAGGCCTTaGACAAAGATGGTGTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SIASTAHGSSSPSASTTIFSPRP*TKMVLL Trigger: CAACAACACCATCTTTGTGCAAGGCCTGGGTGAGAA...AATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR-3UTR GCA 90 bp | CATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCTGCTGTCCATCAAAAGAGACCGTTaGCTCTCCCTTCAGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HILTGGIRTLPVTSSLLSIKRDR*LSLQLA Trigger: GGCAAGCTGAAGGGAGAGGCAACGGTCTCTTTTGAT...GGACAGCAGCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR CAA 90 bp | CCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGACCTaGATAGGATTTCCGGAGAATTCTTTACCATCAAACCAGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: PPPRLKSARRVANET*IGFPENSLPSNQSI Trigger: TATTGACTGGTTTGATGGTAAAGAATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR-3UTR CAA 90 bp | CATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCTGCTGTCCCGGCCTCCACGACCATaGCCACCACCCCGATTAAAG | + |
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Preference number: 3 (lower is better) Translates to: HILTGGIRTLPVTSSLLSRPPRP*PPPRLK Trigger: CTTTAATCGGGGTGGTGGCAATGGTCGTGGAGGCCG...GGACAGCAGCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAATTCTCACCCAGGCCTaGCACAAAGATGGTGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: SLSVYKLIMGCPVFLFVLILTQA*HKDGVV Trigger: AACAACACCATCTTTGTGCAAGGCCTGGGTGAGAAT...TAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | TCCATAGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGTCCCGAGGGCCCCATaGCACCTCTGCCTCCACGGC | + |
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Preference number: 4 (lower is better) Translates to: SIASTAHGSSSPSASTTIVPRAP*HLCLHG Trigger: GCCGTGGAGGCAGAGGTGGCATGGGGCCCTCGGGAC...AATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | AGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCACCCTGCCCGGGCTGGGTaGGGTAGGCCCCATAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLHGPWVLLALGLHDHCHPARAG*GRPHSF Trigger: AAAGCTATGGGGCCTACCCCACCCAGCCCGGGCAGG...GTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | AGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCACGGGAGCTCTGGCTACTaGCATAGCCGCCAGTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: SLHGPWVLLALGLHDHCHGSSGY*HSRQSS Trigger: GCTCGACTGGCGGCTATGGCAGTAGCCAGAGCTCCC...GTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | AGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCACCATAGCCACCACTGCTaGGGTTGTAACCACCACCGC | + |
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Preference number: 4 (lower is better) Translates to: SLHGPWVLLALGLHDHCHHSHHC*GCNHHR Trigger: GCGGTGGTGGTTACAACCGCAGCAGTGGTGGCTATG...GTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | TCGCTGCTGTCCTCCACCGCCACCACCTCCACTGGGAAATCCTCCTCGGCCACCCATGTGAGAGCCACCTaGTCCCCCTCCTGGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: SLLSSTATTSTGKSSSATHVRAT*SPSWAI Trigger: GATGGCCCAGGAGGGGGACCAGGTGGCTCTCACATG...GGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCAGCGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CGGCCTCCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAACTTCCCGAGGTGCTaGTGGGAGCTGGCTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RPPRPLPPPRLKSARRVANFPRC*WELAAG Trigger: GCCAGCAGCCAGCTCCCAGCAGCACCTCGGGAAGTT...TGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | TCCATAGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGGGGCTGCCCATAGCTaGTGCTCTGAGAACTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SIASTAHGSSSPSASTTIGAAHS*CSENCY Trigger: GTAGCAGTTCTCAGAGCAGCAGCTATGGGCAGCCCC...AATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | CCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGAGCCTCCACGGCCCATaGGTCCTCCTCGCCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: PRPLPPPRLKSARRVANESLHGP*VLLALG Trigger: GCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT...CTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | TCGCTGCTGTCCTCCACCGCCACCACCTCCACTGGGAAATCCTCCTCGGCCACCCCCTCCTGGGCCATCTaGTTTAGGGGCCTTACACTG | + |
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Preference number: 4 (lower is better) Translates to: SLLSSTATTSTGKSSSATPSWAI*FRGLTL Trigger: CAGTGTAAGGCCCCTAAACCAGATGGCCCAGGAGGG...GGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCAGCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR TCA 90 bp | CGGCCTCCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAGCTCTGGCCATAGCCTaGAGTGTCCGTGGACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RPPRPLPPPRLKSARRVAALAIA*SVRGLA Trigger: AGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGC...TGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | TCGCTGCTGTCCTCCACCGCCACCACCTCCACTGGGAAATCCTCCTCGGCCACCCCTCTCCCTTCAGCTTaGCAGTTTCCCTGTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SLLSSTATTSTGKSSSATPLPSA*QFPCLC Trigger: ACACAGACAGGGAAACTGGCAAGCTGAAGGGAGAGG...GGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCAGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | AGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCACGGGCCTTACACTGGTTaGATTCATTCCTCCAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLHGPWVLLALGLHDHCHGPYTG*IHSSKR Trigger: TCTCTTGGAGGAATGAATGCAACCAGTGTAAGGCCC...GTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR TCA 90 bp | AGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCACGATGGTGTTGTTGTCTaGATTATCCTGTTCGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLHGPWVLLALGLHDHCHDGVVV*IILFGV Trigger: GACTCCGAACAGGATAATTCAGACAACAACACCATC...GTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CGGCCTCCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCACACCTCCACCACCACTaGTGCTGTTGTACTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: RPPRPLPPPRLKSARRVAHLHHH*CCCTGS Trigger: AGAACCAGTACAACAGCAGCAGTGGTGGTGGAGGTG...TGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGGTCCATAGCCACCGCTaGCACCTCCACCACTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: PRPLPPPRLKSARRVANEVHSHR*HLHHSG Trigger: ACCAGAGTGGTGGAGGTGGCAGCGGTGGCTATGGAC...CTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CCTCCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATCCCTGGAATCCATCTTaGCAGGGCCAAAGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: PPRPLPPPRLKSARRVANPWNPS*QGQSHL Trigger: GAGGTGGCTTTGGCCCTGGCAAGATGGATTCCAGGG...ATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | CCTCCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATCACCTCCACGACCTCTaGGTTCATAGCCACCACTGC | + |
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Preference number: 4 (lower is better) Translates to: PPRPLPPPRLKSARRVANHLHDL*VHSHHC Trigger: GCAGTGGTGGCTATGAACCCAGAGGTCGTGGAGGTG...ATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | TCCATAGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTCCCATAGCTTTGGGTTaGTTGTTGGGTATAATCGTT | + |
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Preference number: 4 (lower is better) Translates to: SIASTAHGSSSPSASTTIPIALG*LLGIIV Trigger: AACGATTATACCCAACAAGCAACCCAAAGCTATGGG...AATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGCATAACCGCCACCACTaGCACCACCACTACTCATGG | + |
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Preference number: 4 (lower is better) Translates to: PRPLPPPRLKSARRVANEHNRHH*HHHYSW Trigger: CCATGAGTAGTGGTGGTGGCAGTGGTGGCGGTTATG...CTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | GAGAAGTTCATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCGGTGCTGCTGGGAGCTaGCTGCTGGCCATAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EKFIFSQVGLGHFQSPARGAAGS*LLAIAR Trigger: CCTGGCTATGGCCAGCAGCCAGCTCCCAGCAGCACC...GCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATGAACTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | GAGAAGTTCATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCACCTGGTCCCCCTCCTaGGCCATCTGGTTTAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: EKFIFSQVGLGHFQSPARTWSPS*AIWFRG Trigger: GCCCCTAAACCAGATGGCCCAGGAGGGGGACCAGGT...GCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATGAACTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR TCA 90 bp | CATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCTGCTGTCCTCCTGTTCGGAGTCATaGCGTGATCCTTGGTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HILTGGIRTLPVTSSLLSSCSES*RDPWSR Trigger: TCGGGACCAAGGATCACGTCATGACTCCGAACAGGA...GGACAGCAGCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | GAGAAGTTCATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCCGTAACTTCCCGAGGTaGTGCTGGGAGCTGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EKFIFSQVGLGHFQSPARRNFPR*CWELAA Trigger: AGCAGCCAGCTCCCAGCAGCACCTCGGGAAGTTACG...GCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATGAACTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | CCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGAGCCTGAAGTGTCCGTaGACTGGCTATAACCACTGT | + |
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Preference number: 4 (lower is better) Translates to: PRPLPPPRLKSARRVANESLKCP*TGYNHC Trigger: ACAGTGGTTATAGCCAGTCCACGGACACTTCAGGCT...CTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR TCA 90 bp | CTTCAGCTTGCCAGTTTCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTCGGAGTCATGACGTaGTCCTTGGTCCCGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LQLASFPVCVQINHGLSRFGVMT*SLVPRA Trigger: GGCCCTCGGGACCAAGGATCACGTCATGACTCCGAA...ACGGGACAGCCCATGATTAATTTGTACACAGACAGGGAAACTGGCAAGCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | CCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGCACCACCACTACTCATaGAGGATTGATCTTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PRPLPPPRLKSARRVANEHHHYS*RIDLGH Trigger: ATGGCCAAGATCAATCCTCCATGAGTAGTGGTGGTG...CTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGACCTTGATAGGATTTCCGGTTCATAGCCACCACTaGTGCGGTTGTAACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: PRLKSARRVANETLIGFPVHSHH*CGCNHH Trigger: GTGGTGGTTACAACCGCAGCAGTGGTGGCTATGAAC...CGGAAATCCTATCAAGGTCTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | TCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAGCCCCATGCCACCTCTaGCTCCACGGCCACCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLSVYKLIMGCPVFLFVLAPCHL*LHGHLH Trigger: GTGGAGGTGGCCGTGGAGGCAGAGGTGGCATGGGGC...TAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | AAGTCTGCCCGGCGAGTAGCAAATGAGACCTTGATAGGATTTCCGGAGAATTCTGCTGCCCATAGCTGCTaGTCTGAGAACTGCTACCGT | + |
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Preference number: 4 (lower is better) Translates to: KSARRVANETLIGFPENSAAHSC*SENCYR Trigger: ACGGTAGCAGTTCTCAGAGCAGCAGCTATGGGCAGC...AGAATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTACTCGCCGGGCAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCTGCTGTCCTTCTCACCCAGGCCTTaGACAAAGATGGTGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: HILTGGIRTLPVTSSLLSFSPRP*TKMVLL Trigger: CAACAACACCATCTTTGTGCAAGGCCTGGGTGAGAA...GGACAGCAGCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | GAGAAGTTCATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCATCAAAAGAGACCGTTaGCTCTCCCTTCAGCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: EKFIFSQVGLGHFQSPARIKRDR*LSLQLA Trigger: GGCAAGCTGAAGGGAGAGGCAACGGTCTCTTTTGAT...GCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATGAACTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | TCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTATTCCCGAGGTGCTGCTaGGAGCTGGCTGCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLSVYKLIMGCPVFLFVLFPRCC*ELAAGH Trigger: ATGGCCAGCAGCCAGCTCCCAGCAGCACCTCGGGAA...TAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR TCA 90 bp | AAGTCTGCCCGGCGAGTAGCAAATGAGACCTTGATAGGATTTCCGGAGAATTCTATATCCCTGGGGAGTTaGCTGAGTTCCATAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KSARRVANETLIGFPENSISLGS*LSSIAC Trigger: ACAGGCTATGGAACTCAGTCAACTCCCCAGGGATAT...AGAATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTACTCGCCGGGCAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR TCA 90 bp | CTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAATAAAGTTCCAACACCGCTaGGTACCGACGCCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSVYKLIMGCPVFLFVLIKFQHR*VPTPGG Trigger: TCCTCCAGGCGTCGGTACTCAGCGGTGTTGGAACTT...TATTAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | TTCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTCTCCACCACCACTGCTaGTGTTGTACTGGTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FPVCVQINHGLSRFLVCLLHHHC*CCTGSA Trigger: AGCAGAACCAGTACAACAGCAGCAGTGGTGGTGGAG...AAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | TTCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTCACTCTGGTCTTGATTaGCATAACCGCCACCACTGC | + |
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Preference number: 4 (lower is better) Translates to: FPVCVQINHGLSRFLVCLHSGLD*HNRHHC Trigger: GCAGTGGTGGCGGTTATGGCAATCAAGACCAGAGTG...AAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CCA 90 bp | CTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAATAGTCTGTGCTCACCCCTaGAATCCATCTTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSVYKLIMGCPVFLFVLIVCAHP*NPSCQG Trigger: GCCCTGGCAAGATGGATTCCAGGGGTGAGCACAGAC...TATTAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR TCA 90 bp | CTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAATATTGGGTATAATCGTTTaGGGCCATGTCCGCGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LSVYKLIMGCPVFLFVLILGIIV*GHVRAR Trigger: GCGTGCGCGGACATGGCCTCAAACGATTATACCCAA...TATTAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| 3UTR CAA 72 bp | CGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGACCTaGATAGGATTTCCGGAGAATTCTTTACCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLKSARRVANET*IGFPENSLPSN Trigger: GTTTGATGGTAAAGAATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTACTCGCCGGGCAGACTTTAATCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAATATGCTGCTCTGAGAACTaGTACCGTAACTTCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSVYKLIMGCPVFLFVLICCSEN*YRNFPR Trigger: CCTCGGGAAGTTACGGTAGCAGTTCTCAGAGCAGCA...TATTAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR GCA 90 bp | CTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAATACATAAGAAGAATAGCTaGTCTGGCCATAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSVYKLIMGCPVFLFVLIHKKNS*SGHSLK Trigger: CTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATG...TATTAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS GCA 90 bp | TGCTGCGGTTGTAACCACCACCGCCGCCGCCGCCGCCGCCACCACTaGCACCCCTGCCGCGGCCTCCACGGTCCTGCTGTCCATAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: CCGCNHHRRRRRRHH*HPCRGLHGPAVHSH Trigger: GTGGCTATGGACAGCAGGACCGTGGAGGCCGCGGCAGGGGTGGCAGTGGTGGCGGCGGCGGCGGCGGCGGTGGTGGTTACAACCGCAGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS GCA 90 bp | TGCCTCCACGGCCACCTCCACGACCTCTGGGTTCATAGCCACCACTaGTGCGGTTGTAACCACCACCGCCGCCGCCGCCGCCGCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: CLHGHLHDLWVHSHH*CGCNHHRRRRRRHH Trigger: GTGGTGGCGGCGGCGGCGGCGGCGGTGGTGGTTACAACCGCAGCAGTGGTGGCTATGAACCCAGAGGTCGTGGAGGTGGCCGTGGAGGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS-3UTR CAA 90 bp | AGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCACCTGCCCGTAAGACGATaGGGAGCTCTGGCTACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLHGPWVLLALGLHDHCHLPVRR*GALATA Trigger: GGCAGTAGCCAGAGCTCCCAATCGTCTTACGGGCAG...GTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS GCA 90 bp | CACCCCTGCCGCGGCCTCCACGGTCCTGCTGTCCATAGCCACCGCTaGCACCTCCACCACTCTGGTCTTGATTGCCATAACCGCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: HPCRGLHGPAVHSHR*HLHHSGLDCHNRHH Trigger: GTGGTGGCGGTTATGGCAATCAAGACCAGAGTGGTGGAGGTGGCAGCGGTGGCTATGGACAGCAGGACCGTGGAGGCCGCGGCAGGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS GCA 90 bp | CGCCACCACCTCCACTGGGAAATCCTCCTCGGCCACCACCACCACTaGCACCACCTCCATAGCCTCCACGGCCCATGGGTCCTAATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHHLHWEILLGHHHH*HHLHSLHGPWVLMQ Trigger: CTGCATTAGGACCCATGGGCCGTGGAGGCTATGGAGGTGGTGGCAGTGGTGGTGGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569760.5 |
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| CDS-3UTR CAA 90 bp | AGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCACCTGCTGTCCATAGCTTaGCTGCTGTCCACCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLHGPWVLLALGLHDHCHLLSIA*LLSTIA Trigger: AGCTATGGTGGACAGCAGCAAAGCTATGGACAGCAG...GTGGCAATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CAA 90 bp | TCCATAGCCTCCACGGCCCATGGGTCCTCCTCGCCCTCGGCCTCCACGACCATTGCCTCTCCCTTCAGCTaGCCAGTTTCCCTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SIASTAHGSSSPSASTTIASPFS*PVSLSV Trigger: CACAGACAGGGAAACTGGCAAGCTGAAGGGAGAGGC...AATGGTCGTGGAGGCCGAGGGCGAGGAGGACCCATGGGCCGTGGAGGCTATGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS CCA 90 bp | GCTCTGAGAACTGCTACCGTAACTTCCCGAGGTGCTGCTGGGAGCTaGCTGCTGGCCATAGCCAGGGTAGGAGGACTGCTGCCCGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALRTATVTSRGAAGS*LLAIARVGGLLPVR Trigger: TCTTACGGGCAGCAGTCCTCCTACCCTGGCTATGGCCAGCAGCCAGCTCCCAGCAGCACCTCGGGAAGTTACGGTAGCAGTTCTCAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
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| CDS GCA 90 bp | GGTAGGAGGACTGCTGCCCGTAAGACGATTGGGAGCTCTGGCTACTaGCATAGCCGCCAGTCGAGCCATATCCCTGGGGAGTTGACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRRTAARKTIGSSGY*HSRQSSHIPGELTE Trigger: CTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGCAGTAGCCAGAGCTCCCAATCGTCTTACGGGCAGCAGTCCTCCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
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| CDS TCA 90 bp | TCATGCAATCCTCCACACTCCCCACCAAAGATACTCCCTGGCTCATaGGACACCTACCCCATGCCACCTCTGCCTCCACGGCCACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SCNPPHSPPKILPGS*DTYPMPPLPPRPPP Trigger: TGGAGGTGGCCGTGGAGGCAGAGGTGGCATGGGGTAGGTGTCTCATGAGCCAGGGAGTATCTTTGGTGGGGAGTGTGGAGGATTGCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS-3UTR CAA 90 bp | TCGCTGCTGTCCTCCACCGCCACCACCTCCACTGGGAAATCCTCCTCGGCCACCAGGGGGATTATAGCTTaGCTGCTGTCCATAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSTATTSTGKSSSATRGIIA*LLSIAL Trigger: CAAAGCTATGGACAGCAGCAAAGCTATAATCCCCCT...GGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCAGCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CAA 90 bp | TCGCTGCTGTCCTCCACCGCCACCACCTCCACTGGGAAATCCTCCTCGGCCACCATTCTCACCCAGGCCTaGCACAAAGATGGTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSTATTSTGKSSSATILTQA*HKDGVV Trigger: AACAACACCATCTTTGTGCAAGGCCTGGGTGAGAAT...GGTGGCCGAGGAGGATTTCCCAGTGGAGGTGGTGGCGGTGGAGGACAGCAGCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CAA 90 bp | CCTCCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATCGGCCTCCACGACCATaGCCACCACCCCGATTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PPRPLPPPRLKSARRVANRPPRP*PPPRLK Trigger: CTTTAATCGGGGTGGTGGCAATGGTCGTGGAGGCCG...ATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS GCA 90 bp | CTTGGCCATAGTTACCTCCACCTCCACCTCCACCTCCACCACCACTaGTGCTGTTGTACTGGTTCTGCTGTCCATAGCCCTGAGGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGHSYLHLHLHLHHH*CCCTGSAVHSPEGD Trigger: ATCCCCCTCAGGGCTATGGACAGCAGAACCAGTACAACAGCAGCAGTGGTGGTGGAGGTGGAGGTGGAGGTGGAGGTAACTATGGCCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS CCA 90 bp | AACCAACTCAGCTTGGCCCGGTTCTCTCACCCGAGAGAAGAGAGATaGGCTCGCCACCAGCCATGCGATGTGCATCCATCCAGTTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQLSLARFSHPREER*ARHQPCDVHPSSFS Trigger: GGAGAAACTGGATGGATGCACATCGCATGGCTGGTGGCGAGCCCATCTCTCTTCTCTCGGGTGAGAGAACCGGGCCAAGCTGAGTTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS GCA 90 bp | GGCCATAGTTACCTCCACCTCCACCTCCACCTCCACCACCACTGCTaGTGTTGTACTGGTTCTGCTGTCCATAGCCCTGAGGGGGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: GHSYLHLHLHLHHHC*CCTGSAVHSPEGDY Trigger: ATAATCCCCCTCAGGGCTATGGACAGCAGAACCAGTACAACAGCAGCAGTGGTGGTGGAGGTGGAGGTGGAGGTGGAGGTAACTATGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS GCA 90 bp | GTTCCAGCACGCACTCTCCAGTTTCTCATGATGATGGTCACTAAGTaGCAGGTGTGGCAACGGCCCAGTCCAAGGCCTACTAGACCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPARTLQFLMMMVTK*QVWQRPSPRPTRPL Trigger: GAGGGGTCTAGTAGGCCTTGGACTGGGCCGTTGCCACACCTGGCACTTAGTGACCATCATCATGAGAAACTGGAGAGTGCGTGCTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487509.6 ENST00000570090.1 |
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| CDS TCA 90 bp | CTGGCTACTGCCATAGCCGCCAGTCGAGCCATATCCCTGGGGAGTTaGCTGAGTTCCATAGCCTGCTACCAGGATAAGAAAAAGGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LATAIAASRAISLGS*LSSIACYQDKKKGV Trigger: GACTCCCTTTTTCTTATCCTGGTAGCAGGCTATGGAACTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGCAGTAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487974.1 |
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| CDS GCA 90 bp | CTCACCCGAGAGAAGAGAGATGGGCTCGCCACCAGCCATGCGATGTaGATCCATCCAGTTTCTCCCAACTTTACCACCAGACACTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: LTREKRDGLATSHAM*IHPVSPNFTTRHLT Trigger: GGTTAAGTGTCTGGTGGTAAAGTTGGGAGAAACTGGATGGATGCACATCGCATGGCTGGTGGCGAGCCCATCTCTCTTCTCTCGGGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS CCA 90 bp | GGCCATAAGAAGAATAGCTGCTCTGGCCATAGCCTGAAGTGTCCGTaGACTGGCTATAACCACTGTAACTCTGCTGTCCGTAGGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GHKKNSCSGHSLKCP*TGYNHCNSAVRRAD Trigger: GTCAGCCCTACGGACAGCAGAGTTACAGTGGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487045.6 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS CCA 90 bp | CGCACTCTCCAGTTTCTCATGATGATGGTCACTAAGTGCCAGGTGTaGCAACGGCCCAGTCCAAGGCCTACTAGACCCCTCTTATTAACC | + |
|
Preference number: 5 (lower is better) Translates to: RTLQFLMMMVTKCQV*QRPSPRPTRPLLLT Trigger: GGTTAATAAGAGGGGTCTAGTAGGCCTTGGACTGGGCCGTTGCCACACCTGGCACTTAGTGACCATCATCATGAGAAACTGGAGAGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487509.6 ENST00000570090.1 |
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| CDS TCA 90 bp | GTTCTGGCTCTGGCCATAAGAAGAATAGCTGCTCTGGCCATAGCCTaGAGTGTCCGTGGACTGGCTATAACCACTGTAACTCTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLALAIRRIAALAIA*SVRGLAITTVTLLS Trigger: GGACAGCAGAGTTACAGTGGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487045.6 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS GCA 90 bp | GAGTTCCATAGCCTGTGTTCTGGCTCTGGCCATAAGAAGAATAGCTaGTCTGGCCATAGCCTGAAGTGTCCGTGGACTGGCTATAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: EFHSLCSGSGHKKNS*SGHSLKCPWTGYNH Trigger: GTGGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAACACAGGCTATGGAACTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000254108.12 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS-3UTR CAA 90 bp | CATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCTGCTGTCCGTAGGCCCCATAGCTTaGGGTTGCTTGTTGGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: HILTGGIRTLPVTSSLLSVGPIA*GCLLGI Trigger: TATACCCAACAAGCAACCCAAAGCTATGGGGCCTAC...GGACAGCAGCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CAA 90 bp | CCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGAGACTACTCATGGAGGATaGATCTTGGCCATAGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: PRPLPPPRLKSARRVANETTHGG*ILAIVT Trigger: GGTAACTATGGCCAAGATCAATCCTCCATGAGTAGT...CTCATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS GCA 90 bp | ACTGAGTTCCATAGCTGTTCTGGCTCTGGCCATAAGAAGAATAGCTaGTCTGGCCATAGCCTGAAGTGTCCGTGGACTGGCTATAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: TEFHSCSGSGHKKNS*SGHSLKCPWTGYNH Trigger: GTGGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAACAGCTATGGAACTCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380244.7 |
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| CDS GCA 90 bp | CTGAGAAAGACTCACTGTTCTGGCTCTGGCCATAAGAAGAATAGCTaGTCTGGCCATAGCCTGAAGTGTCCGTGGACTGGCTATAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRKTHCSGSGHKKNS*SGHSLKCPWTGYNH Trigger: GTGGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAACAGTGAGTCTTTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487045.6 |
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| CDS-3UTR CAA 90 bp | CCTCCACGACCATTGCCACCACCCCGATTAAAGTCTGCCCGGCGAGTAGCAAATGTAGCAAATGAGACCTaGATAGGATTTCCGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PPRPLPPPRLKSARRVANVANET*IGFPEN Trigger: ATTCTCCGGAAATCCTATCAAGGTCTCATTTGCTAC...ATTTGCTACTCGCCGGGCAGACTTTAATCGGGGTGGTGGCAATGGTCGTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CAA 90 bp | GAGAAGTTCATATTCTCACAGGTGGGATTAGGACACTTCCAGTCACCAGCTCGCCATGGAGGATTGATCTaGGCCATAGTTACCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: EKFIFSQVGLGHFQSPARHGGLI*AIVTST Trigger: GGTGGAGGTAACTATGGCCAAGATCAATCCTCCATG...GCGAGCTGGTGACTGGAAGTGTCCTAATCCCACCTGTGAGAATATGAACTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS CCA 90 bp | CACAGATCCCTAGACAACAAGAATACTAAACCATGCACTAGGGACTaGCTTCAGGGAGATTCATGCAATCCTCCACACTCCCCACCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRSLDNKNTKPCTRD*LQGDSCNPPHSPPK Trigger: CTTTGGTGGGGAGTGTGGAGGATTGCATGAATCTCCCTGAAGCCAGTCCCTAGTGCATGGTTTAGTATTCTTGTTGTCTAGGGATCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS-3UTR CAA 90 bp | CTTCAGCTTGCCAGTTTCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTCCCCATAGCTTTGGGTaGCTTGTTGGGTATAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: LQLASFPVCVQINHGLSRPHSFG*LVGYNR Trigger: ACGATTATACCCAACAAGCAACCCAAAGCTATGGGG...ACGGGACAGCCCATGATTAATTTGTACACAGACAGGGAAACTGGCAAGCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS CCA 90 bp | GAAGCTGAAGTCAGGTTAACCATTACCAACTCCCTAGAGGACACATaGGAATACACATACCAAGTTTCCCTACTATTTCCCAGGAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EAEVRLTITNSLEDT*EYTYQVSLLFPRSG Trigger: CCCACTCCTGGGAAATAGTAGGGAAACTTGGTATGTGTATTCCCATGTGTCCTCTAGGGAGTTGGTAATGGTTAACCTGACTTCAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS-3UTR CAA 90 bp | TCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAGTTGGGTATAATCGTTaGAGGCCATGTCCGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SLSVYKLIMGCPVFLFVLVGYNR*RPCPRT Trigger: CGTGCGCGGACATGGCCTCAAACGATTATACCCAAC...TAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CAA 90 bp | TCCCTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTACATATCCCTGGGGAGTaGACTGAGTTCCATAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLSVYKLIMGCPVFLFVLHIPGE*TEFHSL Trigger: CAGGCTATGGAACTCAGTCAACTCCCCAGGGATATG...TAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS-3UTR CAA 90 bp | CTGTCTGTGTACAAATTAATCATGGGCTGTCCCGTTTTCTTGTTTGTCTTAATATCCACCACTCTGGTCTaGATTGCCATAACCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSVYKLIMGCPVFLFVLISTTLV*IAITAT Trigger: GGTGGCGGTTATGGCAATCAAGACCAGAGTGGTGGA...TATTAAGACAAACAAGAAAACGGGACAGCCCATGATTAATTTGTACACAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000566605.5 |
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| CDS TCA 90 bp | TCAGACCTAAATCACTGGGGGTGGAACCCACAAGCCAGGTATTTCTaGGAAATACTTCGTAACAAATACTTCTCACTGCTAACTAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SDLNHWGWNPQARYF*EILRNKYFSLLTKD Trigger: GTCCTTAGTTAGCAGTGAGAAGTATTTGTTACGAAGTATTTCTCAGAAATACCTGGCTTGTGGGTTCCACCCCCAGTGATTTAGGTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS GCA 90 bp | TGTTTCACGGAAAAGAAATATGGAACAGTTTCAACATCTCAGTGCTaGTCAGGTTTAAGAAAAGCAACATTCAGGGCATTGTGGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: CFTEKKYGTVSTSQC*SGLRKATFRALWLT Trigger: CGTCAGCCACAATGCCCTGAATGTTGCTTTTCTTAAACCTGAGCAGCACTGAGATGTTGAAACTGTTCCATATTTCTTTTCCGTGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487045.6 |
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| CDS CCA 90 bp | TTTGACAATTATCCTTTGAAACATGTTAACACCCAGTATACAGTATaGAAACCAGGGCTCAGGAGTGAAATGCCCAACAAGACCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FDNYPLKHVNTQYTV*KPGLRSEMPNKTTQ Trigger: CTGTGTGGTCTTGTTGGGCATTTCACTCCTGAGCCCTGGTTTCCATACTGTATACTGGGTGTTAACATGTTTCAAAGGATAATTGTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS TCA 90 bp | CAAAACGGCTTGCTTCTCAGAGTCAGGAACAAAAATCAGTATTACTaGACCCAATCCATTACCTTTCCCATTACATCAACCTTACCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QNGLLLRVRNKNQYY*TQSITFPITSTLPR Trigger: CCTAGGTAAGGTTGATGTAATGGGAAAGGTAATGGATTGGGTTCAGTAATACTGATTTTTGTTCCTGACTCTGAGAAGCAAGCCGTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483853.1 |
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| CDS GCA 90 bp | AGAGATACAGTGAGGAAACTGAAGCTTCAGAAAGACAAAACGGCTTaGTTCTCAGAGTCAGGAACAAAAATCAGTATTACTGAACCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RDTVRKLKLQKDKTA*FSESGTKISITEPN Trigger: ATTGGGTTCAGTAATACTGATTTTTGTTCCTGACTCTGAGAAGCAAGCCGTTTTGTCTTTCTGAAGCTTCAGTTTCCTCACTGTATCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483853.1 |
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| CDS CCA 90 bp | AAACATCAATACAACCTAAACAGGAGTTCAATGCTTTACTTCATGTaGTCAGGTCTTTCACTAGTTTTGTTCACCAACTTGGACATGATC | + |
|
Preference number: 5 (lower is better) Translates to: KHQYNLNRSSMLYFM*SGLSLVLFTNLDMI Trigger: GATCATGTCCAAGTTGGTGAACAAAACTAGTGAAAGACCTGACCACATGAAGTAAAGCATTGAACTCCTGTTTAGGTTGTATTGATGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564766.1 |
||
| CDS CCA 90 bp | CTAAAGCACCTAGTATCCATCAAGCAACTGGTATCATTTGGTTTATaGAAGACAACTAAAAAGAAATCCACATCCCTTTTGAGTCCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LKHLVSIKQLVSFGL*KTTKKKSTSLLSPY Trigger: ATAGGGACTCAAAAGGGATGTGGATTTCTTTTTAGTTGTCTTCCATAAACCAAATGATACCAGTTGCTTGATGGATACTAGGTGCTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564766.1 |
||
| CDS GCA 72 bp | TGTAACCACCACCGCCGCCGCCGCCGCCGCCACCACTaGCACCCCTGCCGCGGCCTCCACGGTCCTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CNHHRRRRRRHH*HPCRGLHGPAV Trigger: GACAGCAGGACCGTGGAGGCCGCGGCAGGGGTGGCAGTGGTGGCGGCGGCGGCGGCGGCGGTGGTGGTTACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS CCA 72 bp | GACTGCTCTGCTGGGAATAGCCCTGCCCGGGCTGGGTaGGGTAGGCCCCATAGCTTTGGGTTGCTTGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DCSAGNSPARAG*GRPHSFGLLVG Trigger: CCCAACAAGCAACCCAAAGCTATGGGGCCTACCCCACCCAGCCCGGGCAGGGCTATTCCCAGCAGAGCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487045.6 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS GCA 72 bp | CGCGGCCTCCACGGTCCTGCTGTCCATAGCCACCGCTaGCACCTCCACCACTCTGGTCTTGATTGCCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGLHGPAVHSHR*HLHHSGLDCHN Trigger: GTTATGGCAATCAAGACCAGAGTGGTGGAGGTGGCAGCGGTGGCTATGGACAGCAGGACCGTGGAGGCCGCG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS CCA 72 bp | ACTGCTACCGTAACTTCCCGAGGTGCTGCTGGGAGCTaGCTGCTGGCCATAGCCAGGGTAGGAGGACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TATVTSRGAAGS*LLAIARVGGLL Trigger: CAGCAGTCCTCCTACCCTGGCTATGGCCAGCAGCCAGCTCCCAGCAGCACCTCGGGAAGTTACGGTAGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
||
| CDS CAA 90 bp | CTGCTGGCCATAGCCAGGGTAGGAGGACTGCTGCCCGTAAGACGATaGGGAGCTCTGGCTACTGCCATAGCCGCCAGTCGAGCCATATCC | + |
|
Preference number: 6 (lower is better) Translates to: LLAIARVGGLLPVRR*GALATAIAASRAIS Trigger: GGATATGGCTCGACTGGCGGCTATGGCAGTAGCCAGAGCTCCCAATCGTCTTACGGGCAGCAGTCCTCCTACCCTGGCTATGGCCAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
||
| CDS GCA 72 bp | ACTGCTGCCCGTAAGACGATTGGGAGCTCTGGCTACTaGCATAGCCGCCAGTCGAGCCATATCCCTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TAARKTIGSSGY*HSRQSSHIPGE Trigger: CTCCCCAGGGATATGGCTCGACTGGCGGCTATGGCAGTAGCCAGAGCTCCCAATCGTCTTACGGGCAGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
||
| CDS CCA 72 bp | AGCTTGGCCCGGTTCTCTCACCCGAGAGAAGAGAGATaGGCTCGCCACCAGCCATGCGATGTGCATCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SLARFSHPREER*ARHQPCDVHPS Trigger: GGATGGATGCACATCGCATGGCTGGTGGCGAGCCCATCTCTCTTCTCTCGGGTGAGAGAACCGGGCCAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 72 bp | ATAGCCAGGGTAGGAGGACTGCTGCCCGTAAGACGATaGGGAGCTCTGGCTACTGCCATAGCCGCCAGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: IARVGGLLPVRR*GALATAIAASR Trigger: TCGACTGGCGGCTATGGCAGTAGCCAGAGCTCCCAATCGTCTTACGGGCAGCAGTCCTCCTACCCTGGCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
||
| CDS GCA 72 bp | TACCTCCACCTCCACCTCCACCTCCACCACCACTGCTaGTGTTGTACTGGTTCTGCTGTCCATAGCCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: YLHLHLHLHHHC*CCTGSAVHSPE Trigger: CTCAGGGCTATGGACAGCAGAACCAGTACAACAGCAGCAGTGGTGGTGGAGGTGGAGGTGGAGGTGGAGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS CAA 72 bp | TGCCATAGCCGCCAGTCGAGCCATATCCCTGGGGAGTaGACTGAGTTCCATAGCCTGTGTTCTGGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CHSRQSSHIPGE*TEFHSLCSGSG Trigger: GCCAGAGCCAGAACACAGGCTATGGAACTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000254108.12 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS TCA 72 bp | GCCATAGCCGCCAGTCGAGCCATATCCCTGGGGAGTTaGCTGAGTTCCATAGCTGTTCTGGCTCTGGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: AIAASRAISLGS*LSSIAVLALAI Trigger: TATGGCCAGAGCCAGAACAGCTATGGAACTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380244.7 |
||
| CDS GCA 72 bp | AGTTACCTCCACCTCCACCTCCACCTCCACCACCACTaGTGCTGTTGTACTGGTTCTGCTGTCCATAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SYLHLHLHLHHH*CCCTGSAVHSP Trigger: AGGGCTATGGACAGCAGAACCAGTACAACAGCAGCAGTGGTGGTGGAGGTGGAGGTGGAGGTGGAGGTAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS GCA 72 bp | CTCACAGCCTCACTCCAAACCCTTTCCTGGGTCGCCTaGCCAGAGGAGAAAATTCTAGGCAGGCCCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTASLQTLSWVA*PEEKILGRPLK Trigger: CTTAAGGGGCCTGCCTAGAATTTTCTCCTCTGGGCAGGCGACCCAGGAAAGGGTTTGGAGTGAGGCTGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 72 bp | ACCGCCACCACTGCCACCACCACTACTCATGGAGGATaGATCTTGGCCATAGTTACCTCCACCTCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TATTATTTTHGG*ILAIVTSTSTS Trigger: GGAGGTGGAGGTGGAGGTAACTATGGCCAAGATCAATCCTCCATGAGTAGTGGTGGTGGCAGTGGTGGCGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS CAA 72 bp | TGCCATAGCCGCCAGTCGAGCCATATCCCTGGGGAGTaGACTGAGTTCCATAGCTGTTCTGGCTCTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CHSRQSSHIPGE*TEFHSCSGSGH Trigger: ATGGCCAGAGCCAGAACAGCTATGGAACTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380244.7 |
||
| CDS CAA 90 bp | TCTGGCTACTGCCATAGCCGCCAGTCGAGCCATATCCCTGGGGAGTaGACTGAGTTCCATAGCCTGTGTTCTGGCTCTGGCCATAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SGYCHSRQSSHIPGE*TEFHSLCSGSGHKK Trigger: CTTCTTATGGCCAGAGCCAGAACACAGGCTATGGAACTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGCAGTAGCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000254108.12 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS CAA 90 bp | ATAACCGCCACCACTGCCACCACCACTACTCATGGAGGATTGATCTaGGCCATAGTTACCTCCACCTCCACCTCCACCTCCACCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: ITATTATTTTHGGLI*AIVTSTSTSTSTTT Trigger: AGTGGTGGTGGAGGTGGAGGTGGAGGTGGAGGTAACTATGGCCAAGATCAATCCTCCATGAGTAGTGGTGGTGGCAGTGGTGGCGGTTAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS GCA 72 bp | AGCCTGTGTTCTGGCTCTGGCCATAAGAAGAATAGCTaGTCTGGCCATAGCCTGAAGTGTCCGTGGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLCSGSGHKKNS*SGHSLKCPWTG Trigger: GCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAACACAGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000254108.12 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
||
| CDS GCA 72 bp | CGCACTCTCCAGTTTCTCATGATGATGGTCACTAAGTaGCAGGTGTGGCAACGGCCCAGTCCAAGGCCTACT | + |
|
Preference number: 6 (lower is better) Translates to: RTLQFLMMMVTK*QVWQRPSPRPT Trigger: AGTAGGCCTTGGACTGGGCCGTTGCCACACCTGGCACTTAGTGACCATCATCATGAGAAACTGGAGAGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000487509.6 ENST00000570090.1 |
||
| CDS CCA 72 bp | CAGTTTCTCATGATGATGGTCACTAAGTGCCAGGTGTaGCAACGGCCCAGTCCAAGGCCTACTAGACCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: QFLMMMVTKCQV*QRPSPRPTRPL Trigger: GAGGGGTCTAGTAGGCCTTGGACTGGGCCGTTGCCACACCTGGCACTTAGTGACCATCATCATGAGAAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487509.6 ENST00000570090.1 |
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| CDS CAA 90 bp | TCCATAGCCCTGAGGGGGATTATAGCTTTGCTGCTGTCCATAGCTTaGCTGCTGTCCACCATAGCTAGGCTGCTGGCTGTAGCTCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SIALRGIIALLLSIA*LLSTIARLLAVAPT Trigger: AGTGGGAGCTACAGCCAGCAGCCTAGCTATGGTGGACAGCAGCAAAGCTATGGACAGCAGCAAAGCTATAATCCCCCTCAGGGCTATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
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| CDS TCA 72 bp | GCCATAGCCGCCAGTCGAGCCATATCCCTGGGGAGTTaGCTGAGTTCCATAGCCTGCTACCAGGATAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AIAASRAISLGS*LSSIACYQDKK Trigger: TTTCTTATCCTGGTAGCAGGCTATGGAACTCAGTCAACTCCCCAGGGATATGGCTCGACTGGCGGCTATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487974.1 |
||
| CDS GCA 72 bp | CATAGCTGTTCTGGCTCTGGCCATAAGAAGAATAGCTaGTCTGGCCATAGCCTGAAGTGTCCGTGGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HSCSGSGHKKNS*SGHSLKCPWTG Trigger: GCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAACAGCTATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380244.7 |
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| CDS GCA 72 bp | GAGAAGAGAGATGGGCTCGCCACCAGCCATGCGATGTaGATCCATCCAGTTTCTCCCAACTTTACCACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EKRDGLATSHAM*IHPVSPNFTTR Trigger: TCTGGTGGTAAAGTTGGGAGAAACTGGATGGATGCACATCGCATGGCTGGTGGCGAGCCCATCTCTCTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS GCA 72 bp | ACTCACTGTTCTGGCTCTGGCCATAAGAAGAATAGCTaGTCTGGCCATAGCCTGAAGTGTCCGTGGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: THCSGSGHKKNS*SGHSLKCPWTG Trigger: GCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAGAGCCAGAACAGTGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487045.6 |
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| CDS CAA 90 bp | GTTGTACTGGTTCTGCTGTCCATAGCCCTGAGGGGGATTATAGCTTaGCTGCTGTCCATAGCTTTGCTGCTGTCCACCATAGCTAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVLVLLSIALRGIIA*LLSIALLLSTIARL Trigger: CAGCCTAGCTATGGTGGACAGCAGCAAAGCTATGGACAGCAGCAAAGCTATAATCCCCCTCAGGGCTATGGACAGCAGAACCAGTACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487509.6 ENST00000487974.1 ENST00000566605.5 ENST00000568685.1 |
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| CDS GCA 72 bp | AAACCATGCACTAGGGACTGGCTTCAGGGAGATTCATaGAATCCTCCACACTCCCCACCAAAGATACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: KPCTRDWLQGDS*NPPHSPPKILP Trigger: AGGGAGTATCTTTGGTGGGGAGTGTGGAGGATTGCATGAATCTCCCTGAAGCCAGTCCCTAGTGCATGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS CCA 72 bp | AAGAATAGCTGCTCTGGCCATAGCCTGAAGTGTCCGTaGACTGGCTATAACCACTGTAACTCTGCTGTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: KNSCSGHSLKCP*TGYNHCNSAVR Trigger: ACGGACAGCAGAGTTACAGTGGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487045.6 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS TCA 72 bp | CTGGCCATAAGAAGAATAGCTGCTCTGGCCATAGCCTaGAGTGTCCGTGGACTGGCTATAACCACTGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: LAIRRIAALAIA*SVRGLAITTVT Trigger: AGTTACAGTGGTTATAGCCAGTCCACGGACACTTCAGGCTATGGCCAGAGCAGCTATTCTTCTTATGGCCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000254108.12 ENST00000380244.7 ENST00000487045.6 ENST00000487509.6 ENST00000566605.5 ENST00000568685.1 |
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| CDS CCA 72 bp | TTGGACACAACGATCAAAAGGATCCTAAAGCCAAGATaGCACCACGTGTTCCAGCACGCACTCTCCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LDTTIKRILKPR*HHVFQHALSSF Trigger: GAAACTGGAGAGTGCGTGCTGGAACACGTGGTGCCATCTTGGCTTTAGGATCCTTTTGATCGTTGTGTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487509.6 ENST00000570090.1 |
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| CDS TCA 72 bp | CACCCAGTATACAGTATGGAAACCAGGGCTCAGGAGTaGAATGCCCAACAAGACCACACAGAAAAGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: HPVYSMETRAQE*NAQQDHTEKSI Trigger: GATGGACTTTTCTGTGTGGTCTTGTTGGGCATTTCACTCCTGAGCCCTGGTTTCCATACTGTATACTGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564766.1 |
||
| CDS CCA 72 bp | AACCATCTGAGTGTGGTCCAGACGCATCAGCATCACTaGGGACTTGTTAGAAAGGTAGATTTTCAGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: NHLSVVQTHQHH*GLVRKVDFQGP Trigger: AGGACCCTGAAAATCTACCTTTCTAACAAGTCCCCAGTGATGCTGATGCGTCTGGACCACACTCAGATGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CAA 72 bp | GGAGTTGTCTCCCACACACTCACACACACACAAGCCTaGGACACAACGATCAAAAGGATCCTAAAGCCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GVVSHTLTHTQA*DTTIKRILKPR Trigger: TCTTGGCTTTAGGATCCTTTTGATCGTTGTGTCCAAGGCTTGTGTGTGTGTGAGTGTGTGGGAGACAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487509.6 ENST00000570090.1 |
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| CDS CAA 90 bp | CTCAGGGCAATGTTACATCCCTCTTCCAGAATTAAACATTCGGAGTaGTCTCCCACACACTCACACACACACAAGCCTTGGACACAACGA | + |
|
Preference number: 6 (lower is better) Translates to: LRAMLHPSSRIKHSE*SPTHSHTHKPWTQR Trigger: TCGTTGTGTCCAAGGCTTGTGTGTGTGTGAGTGTGTGGGAGACAACTCCGAATGTTTAATTCTGGAAGAGGGATGTAACATTGCCCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS GCA 72 bp | ACAAATAGGTGGGAGACCACTGTCAAAGCATATTTTTaGCCAAAAGGTCTGCTTACTTCAGTCAGCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TNRWETTVKAYF*PKGLLTSVSWP Trigger: GGGCCAGCTGACTGAAGTAAGCAGACCTTTTGGGCAAAAATATGCTTTGACAGTGGTCTCCCACCTATTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CCA 72 bp | CTAGACAACAAGAATACTAAACCATGCACTAGGGACTaGCTTCAGGGAGATTCATGCAATCCTCCACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LDNKNTKPCTRD*LQGDSCNPPHS Trigger: GGAGTGTGGAGGATTGCATGAATCTCCCTGAAGCCAGTCCCTAGTGCATGGTTTAGTATTCTTGTTGTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 90 bp | CCAAGTTTCCCTACTATTTCCCAGGAGTGGGATCATCGGTTTCCCTaGCAGAGAAAGAAGTCTTCACTTCCATGTTTCTTGCCTAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: PSFPTISQEWDHRFP*QRKKSSLPCFLPRI Trigger: TATCCTAGGCAAGAAACATGGAAGTGAAGACTTCTTTCTCTGCAAGGGAAACCGATGATCCCACTCCTGGGAAATAGTAGGGAAACTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 72 bp | CCTACTATTTCCCAGGAGTGGGATCATCGGTTTCCCTaGCAGAGAAAGAAGTCTTCACTTCCATGTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PTISQEWDHRFP*QRKKSSLPCFL Trigger: CAAGAAACATGGAAGTGAAGACTTCTTTCTCTGCAAGGGAAACCGATGATCCCACTCCTGGGAAATAGTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 72 bp | ATGTTACATCCCTCTTCCAGAATTAAACATTCGGAGTaGTCTCCCACACACTCACACACACACAAGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLHPSSRIKHSE*SPTHSHTHKPW Trigger: CCAAGGCTTGTGTGTGTGTGAGTGTGTGGGAGACAACTCCGAATGTTTAATTCTGGAAGAGGGATGTAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 72 bp | CCTTTCCCATTACATCAACCTTACCTAGGTAAGCTTTaGGCTAAATCTGACCCCAACAGTGTGGCCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: PFPLHQPYLGKL*AKSDPNSVALT Trigger: TGTCAAGGCCACACTGTTGGGGTCAGATTTAGCCAAAAGCTTACCTAGGTAAGGTTGATGTAATGGGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483853.1 |
||
| CDS CCA 72 bp | ATACACATACCAAGTTTCCCTACTATTTCCCAGGAGTaGGATCATCGGTTTCCCTTGCAGAGAAAGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: IHIPSFPTISQE*DHRFPLQRKKS Trigger: AGACTTCTTTCTCTGCAAGGGAAACCGATGATCCCACTCCTGGGAAATAGTAGGGAAACTTGGTATGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 72 bp | CTCATAAAGCCAGCCTCTCAGAAGCTGTTAGTGATGTaGCAACTCATAGGCAAAGATAGTTACCCTCCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LIKPASQKLLVM*QLIGKDSYPPF Trigger: GAAAGGAGGGTAACTATCTTTGCCTATGAGTTGCAACATCACTAACAGCTTCTGAGAGGCTGGCTTTATGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487974.1 |
||
| CDS TCA 72 bp | AATCACTGGGGGTGGAACCCACAAGCCAGGTATTTCTaGGAAATACTTCGTAACAAATACTTCTCACTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: NHWGWNPQARYF*EILRNKYFSLL Trigger: TAGCAGTGAGAAGTATTTGTTACGAAGTATTTCTCAGAAATACCTGGCTTGTGGGTTCCACCCCCAGTGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564766.1 |
||
| CDS CCA 72 bp | TGGAAACAAGTATCATTACTCAAAATCTCTATTCAGTaGTATGGATGGGAGTTCAGGCTCCCAAGTTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WKQVSLLKISIQ*YGWEFRLPSSH Trigger: GTGAGAACTTGGGAGCCTGAACTCCCATCCATACCACTGAATAGAGATTTTGAGTAATGATACTTGTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487509.6 |
||
| CDS CAA 72 bp | CTGCAAATGAACAATCAGACAAAGCATTGCTGGGAGTaGGGAATTTTGGAAACTCTGTTCACTTACCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LQMNNQTKHCWE*GILETLFTYHQ Trigger: TTGGTGGTAAGTGAACAGAGTTTCCAAAATTCCCAACTCCCAGCAATGCTTTGTCTGATTGTTCATTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000487509.6 ENST00000570090.1 |
||
| CDS CAA 72 bp | ATGTGGTCAGGTCTTTCACTAGTTTTGTTCACCAACTaGGACATGATCCACATTTTGAAAGAACCACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: MWSGLSLVLFTN*DMIHILKEPLL Trigger: CAGCAGTGGTTCTTTCAAAATGTGGATCATGTCCAAGTTGGTGAACAAAACTAGTGAAAGACCTGACCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CAA 90 bp | AGGAGTTCAATGCTTTACTTCATGTGGTCAGGTCTTTCACTAGTTTaGTTCACCAACTTGGACATGATCCACATTTTGAAAGAACCACTG | + |
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Preference number: 6 (lower is better) Translates to: RSSMLYFMWSGLSLV*FTNLDMIHILKEPL Trigger: CAGTGGTTCTTTCAAAATGTGGATCATGTCCAAGTTGGTGAACAAAACTAGTGAAAGACCTGACCACATGAAGTAAAGCATTGAACTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CAA 90 bp | GCCAGCCATGCTGATAAATTTCAGATTCAGTTTGACAATTATCCTTaGAAACATGTTAACACCCAGTATACAGTATGGAAACCAGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ASHADKFQIQFDNYP*KHVNTQYTVWKPGL Trigger: GAGCCCTGGTTTCCATACTGTATACTGGGTGTTAACATGTTTCAAAGGATAATTGTCAAACTGAATCTGAAATTTATCAGCATGGCTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CAA 72 bp | AGTGAGGAAACTGAAGCTTCAGAAAGACAAAACGGCTaGCTTCTCAGAGTCAGGAACAAAAATCAGTATTAC | + |
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Preference number: 6 (lower is better) Translates to: SEETEASERQNG*LLRVRNKNQYY Trigger: GTAATACTGATTTTTGTTCCTGACTCTGAGAAGCAAGCCGTTTTGTCTTTCTGAAGCTTCAGTTTCCTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000483853.1 |
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| CDS CAA 90 bp | CAGGGAACAGACCAGAAATCTTATTTCCGTAATGCAGCCTCTATTTaGTTTTTCCAGAGACCATCTTTGACCAATGTTTATCTGAATTCG | + |
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Preference number: 6 (lower is better) Translates to: QGTDQKSYFRNAASI*FFQRPSLTNVYLNS Trigger: CGAATTCAGATAAACATTGGTCAAAGATGGTCTCTGGAAAAACAAAATAGAGGCTGCATTACGGAAATAAGATTTCTGGTCTGTTCCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS CCA 72 bp | TACAACCTAAACAGGAGTTCAATGCTTTACTTCATGTaGTCAGGTCTTTCACTAGTTTTGTTCACCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: YNLNRSSMLYFM*SGLSLVLFTNL Trigger: CAAGTTGGTGAACAAAACTAGTGAAAGACCTGACCACATGAAGTAAAGCATTGAACTCCTGTTTAGGTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CCA 72 bp | GTATCATTACTCAAAATCTCTATTCAGTGGTATGGATaGGAGTTCAGGCTCCCAAGTTCTCACAAAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: VSLLKISIQWYG*EFRLPSSHKNK Trigger: TTTATTTTTGTGAGAACTTGGGAGCCTGAACTCCCATCCATACCACTGAATAGAGATTTTGAGTAATGATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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| CDS CAA 72 bp | ATGCTTTACTTCATGTGGTCAGGTCTTTCACTAGTTTaGTTCACCAACTTGGACATGATCCACATTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: MLYFMWSGLSLV*FTNLDMIHILK Trigger: TTTCAAAATGTGGATCATGTCCAAGTTGGTGAACAAAACTAGTGAAAGACCTGACCACATGAAGTAAAGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CAA 72 bp | TTATGGAAGACAACTAAAAAGAAATCCACATCCCTTTaGAGTCCCTATATGCCAGCCATGCTGATAAATTTC | + |
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Preference number: 6 (lower is better) Translates to: LWKTTKKKSTSL*SPYMPAMLINF Trigger: GAAATTTATCAGCATGGCTGGCATATAGGGACTCAAAAGGGATGTGGATTTCTTTTTAGTTGTCTTCCATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CAA 90 bp | TCATTTGGTTTATGGAAGACAACTAAAAAGAAATCCACATCCCTTTaGAGTCCCTATATGCCAGCCATGCTGATAAATTTCAGATTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SFGLWKTTKKKSTSL*SPYMPAMLINFRFS Trigger: ACTGAATCTGAAATTTATCAGCATGGCTGGCATATAGGGACTCAAAAGGGATGTGGATTTCTTTTTAGTTGTCTTCCATAAACCAAATGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564766.1 |
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| CDS CAA 72 bp | GACCAGAAATCTTATTTCCGTAATGCAGCCTCTATTTaGTTTTTCCAGAGACCATCTTTGACCAATGTTTAT | + |
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Preference number: 6 (lower is better) Translates to: DQKSYFRNAASI*FFQRPSLTNVY Trigger: ATAAACATTGGTCAAAGATGGTCTCTGGAAAAACAAAATAGAGGCTGCATTACGGAAATAAGATTTCTGGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000487509.6 |
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