RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FUNDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165775

Ensembl transcript IDs: ENST00000369498.8, ENST00000471528.1, ENST00000484175.5, ENST00000492303.1

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGGGCCGACCCATAGTAGCCAGGAAGGGGACAGAAGGGGTCCCTaGGCCGGGACACTGTCCAGCACGCTGCAGGACAAGGGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: AGPTHSSQEGDRRGP*AGTLSSTLQDKGRE
Trigger: TTCCCTTCCCTTGTCCTGCAGCGTGCTGGACAGTGTCCCGGCTCAGGGACCCCTTCTGTCCCCTTCCTGGCTACTATGGGTCGGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp CCATCCCACCAGGTCCCATTGCGGGAGAGACGCTGGGTCAAAGGGTaGCTCAAAGTGGTGAGGACGCAGGGCCGACCCATAGTAGCCAGG +
Preference number: 1 (lower is better)
Translates to: PSHQVPLRERRWVKG*LKVVRTQGRPIVAR
Trigger: CCTGGCTACTATGGGTCGGCCCTGCGTCCTCACCACTTTGAGCCACCCTTTGACCCAGCGTCTCTCCCGCAATGGGACCTGGTGGGATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 90 bp CATTGGACTCCATCTGTTGAGCCCGAGCAGGCAGCGGCCAGAAAGTaGCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAACCTTG +
Preference number: 1 (lower is better)
Translates to: HWTPSVEPEQAAARK*PWIRLCSPTLGRTL
Trigger: CAAGGTTCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp ACTCCATCTGTTGAGCCCGAGCAGGCAGCGGCCAGAAAGTGCCCCTaGATCCGTCTCTGCTCTCCGACTCTGGGGAGAACCTTGGGAAGA +
Preference number: 1 (lower is better)
Translates to: TPSVEPEQAAARKCP*IRLCSPTLGRTLGR
Trigger: TCTTCCCAAGGTTCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGCCTGCTCGGGCTCAACAGATGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 90 bp AAGGGGACAGAAGGGGTCCCTGAGCCGGGACACTGTCCAGCACGCTaGAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATCCT +
Preference number: 1 (lower is better)
Translates to: KGTEGVPEPGHCPAR*RTREGKPSLRRCHP
Trigger: AGGATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACAGTGTCCCGGCTCAGGGACCCCTTCTGTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp AGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCACAATCCCAAGTaGTCACAGTGGCCTCACACCGTGGGCAGAACTCACAGCCGTTCT +
Preference number: 1 (lower is better)
Translates to: SCACSTSMPALHNPK*SQWPHTVGRTHSRS
Trigger: AGAACGGCTGTGAGTTCTGCCCACGGTGTGAGGCCACTGTGACCACTTGGGATTGTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 90 bp GGATACACATTCTTGGGGGAGACTGAAACATTGGACTCCATCTGTTaGGCCCGAGCAGGCAGCGGCCAGAAAGTGCCCCTGGATCCGTCT +
Preference number: 1 (lower is better)
Translates to: GYTFLGETETLDSIC*ARAGSGQKVPLDPS
Trigger: AGACGGATCCAGGGGCACTTTCTGGCCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAATGTGTATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 90 bp GGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATCTaGTGGGCTTCTGGGGACGCCTCAGGAAACTTACAGCCATGGCAG +
Preference number: 1 (lower is better)
Translates to: GSQFHGLYRKHGTGI*WASGDASGNLQPWQ
Trigger: CTGCCATGGCTGTAAGTTTCCTGAGGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp CAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTaGGGAGAACCTTGGGAAGAAGAGACTCAAAAGTTCTACCTCTCC +
Preference number: 1 (lower is better)
Translates to: QRPESAPGSVSALRL*GEPWEEETQKFYLS
Trigger: GGAGAGGTAGAACTTTTGAGTCTCTTCTTCCCAAGGTTCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp CTCCCCGCACCCAGCTCCCGTGTCAGCAATGAGGATACACATTCTTaGGGGAGACTGAAACATTGGACTCCATCTGTTGAGCCCGAGCAG +
Preference number: 1 (lower is better)
Translates to: LPAPSSRVSNEDTHS*GRLKHWTPSVEPEQ
Trigger: CTGCTCGGGCTCAACAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAATGTGTATCCTCATTGCTGACACGGGAGCTGGGTGCGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 90 bp CTCACACCGTGGGCAGAACTCACAGCCGTTCTCATACTAGCAGGATaGGGCCAACCTGCAATACTGACCTCAACCATGACCCTCACAGTC +
Preference number: 1 (lower is better)
Translates to: LTPWAELTAVLILAG*GQPAILTSTMTLTV
Trigger: GACTGTGAGGGTCATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTGAGTTCTGCCCACGGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 90 bp GGCAGAACTCACAGCCGTTCTCATACTAGCAGGATGAGGCCAACCTaGAATACTGACCTCAACCATGACCCTCACAGTCGTAGAGGCAGC +
Preference number: 1 (lower is better)
Translates to: GRTHSRSHTSRMRPT*NTDLNHDPHSRRGS
Trigger: GCTGCCTCTACGACTGTGAGGGTCATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTGAGTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 90 bp GCTAAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATaGCAGCTCTGCACAATCCCAAGTGGTCACAGTGGCCTCACACCG +
Preference number: 1 (lower is better)
Translates to: AKLKTRCAAVRVQPP*QLCTIPSGHSGLTP
Trigger: CGGTGTGAGGCCACTGTGACCACTTGGGATTGTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp CGTGTCAGCAATGAGGATACACATTCTTGGGGGAGACTGAAACATTaGACTCCATCTGTTGAGCCCGAGCAGGCAGCGGCCAGAAAGTGC +
Preference number: 1 (lower is better)
Translates to: RVSNEDTHSWGRLKH*TPSVEPEQAAARKC
Trigger: GCACTTTCTGGCCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAATGTGTATCCTCATTGCTGACACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp CCATGGGCTGTACAGGAAGCATGGCACTGGTATCTGATGGGCTTCTaGGGACGCCTCAGGAAACTTACAGCCATGGCAGAAAGCAAAAGG +
Preference number: 1 (lower is better)
Translates to: PWAVQEAWHWYLMGF*GRLRKLTAMAESKR
Trigger: CCTTTTGCTTTCTGCCATGGCTGTAAGTTTCCTGAGGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATGCTTCCTGTACAGCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 90 bp ACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATCCTATTGGTTaGCAAGTTGGAAGCCTTGAGTGCGGTGTTACCACGTCGCCGCCA +
Preference number: 1 (lower is better)
Translates to: TREGKPSLRRCHPIG*QVGSLECGVTTSPP
Trigger: TGGCGGCGACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp TTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTaGTATCTGATGGGCTTCTGGGGACGCCTCAGGAAACTTACAGCC +
Preference number: 1 (lower is better)
Translates to: FSWLTVPWAVQEAWH*YLMGFWGRLRKLTA
Trigger: GGCTGTAAGTTTCCTGAGGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp AGTCAAGAACCCCACTGTCCTGTTAATGAATGTCTGGAGGCTGAGTaGCGGGAGATTGCAACAAACAAGCGGCCATTTGGGAGGAGAGTC +
Preference number: 1 (lower is better)
Translates to: SQEPHCPVNECLEAE*REIATNKRPFGRRV
Trigger: GACTCTCCTCCCAAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATTAACAGGACAGTGGGGTTCTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp GCACAGAGCACTTTGGTTAGCTTTGCTGTTACCATCCCATTGCTGTaGGTAAGTCACACAGGTAAAGTGGCTGCAGCCACTATCACCATA +
Preference number: 1 (lower is better)
Translates to: AQSTLVSFAVTIPLL*VSHTGKVAAATITI
Trigger: TATGGTGATAGTGGCTGCAGCCACTTTACCTGTGTGACTTACCCACAGCAATGGGATGGTAACAGCAAAGCTAACCAAAGTGCTCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 90 bp CAGGATCCACCTCCATTAGGGAATACGGTTCAACATGACATTCGGTaGCTCCAAACTGTATCAGTATACGACTTTCTTTCAGTTTTGAAA +
Preference number: 1 (lower is better)
Translates to: QDPPPLGNTVQHDIR*LQTVSVYDFLSVLK
Trigger: TTTCAAAACTGAAAGAAAGTCGTATACTGATACAGTTTGGAGCCACCGAATGTCATGTTGAACCGTATTCCCTAATGGAGGTGGATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 90 bp AGGGACCTACCTACAGATCTTAATTCAGACAATCAGAATACAGTCTaGGGCCAGACTATTTATTACAACCTACTCAAGGTAGTTTACAAC +
Preference number: 1 (lower is better)
Translates to: RDLPTDLNSDNQNTV*GQTIYYNLLKVVYN
Trigger: GTTGTAAACTACCTTGAGTAGGTTGTAATAAATAGTCTGGCCTCAGACTGTATTCTGATTGTCTGAATTAAGATCTGTAGGTAGGTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGACCCACCAGGTCCCATTaGGGGAGAGACGCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRPTRSH*GRDAGS
Trigger: TGACCCAGCGTCTCTCCCGCAATGGGACCTGGTGGG...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGACCCAAGTGGTCACAGTaGCCTCACACCGTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRPKWSQ*PHTVGR
Trigger: TCTGCCCACGGTGTGAGGCCACTGTGACCACTTGGG...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGACACCTGAAACAAAACTaGTGGCACAATAGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRHLKQN*WHNRAL
Trigger: CAAGGCCCTATTGTGCCAGCAGTTTTGTTTCAGGTG...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp GACAGTAACTGCCCAGATCCAGTAGCAAGGACTGTCACCCCAGTGGTAGGGGAGTGGAGAGGCATTGGGTaGCCAGTCTCCCCACATGCA +
Preference number: 2 (lower is better)
Translates to: DSNCPDPVARTVTPVVGEWRGIG*PVSPHA
Trigger: TGCATGTGGGGAGACTGGCCACCCAATGCCTCTCCA...CTCCCCTACCACTGGGGTGACAGTCCTTGCTACTGGATCTGGGCAGTTACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATGACAGAAGGGGTCCCTaGGCCGGGACACTGTCCAGC +
Preference number: 2 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYDRRGP*AGTLSS
Trigger: GCTGGACAGTGTCCCGGCTCAGGGACCCCTTCTGTC...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTTTGGACTCCATCTGTTaGGCCCGAGCAGGCAGCGGC +
Preference number: 2 (lower is better)
Translates to: NECLEAEWREIATNKRPFLDSIC*ARAGSG
Trigger: GCCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAA...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp GACAGTAACTGCCCAGATCCAGTAGCAAGGACTGTCACCCCAGTGGTAGGGGAGTCTGCTCTCCGACTCTaGGGAGAACCTTGGGAAGAA +
Preference number: 2 (lower is better)
Translates to: DSNCPDPVARTVTPVVGESALRL*GEPWEE
Trigger: TTCTTCCCAAGGTTCTCCCCAGAGTCGGAGAGCAGA...CTCCCCTACCACTGGGGTGACAGTCCTTGCTACTGGATCTGGGCAGTTACTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 90 bp AAGGGAAGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTaGGAAGCCTTGAGTGCGGTGTTACCACGTCGCCGCCACAAGGGG +
Preference number: 2 (lower is better)
Translates to: KGSLHYVDAILLVDK*EALSAVLPRRRHKG
Trigger: CCCCTTGTGGCGGCGACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTGCCAGAAAGTGCCCCTaGATCCGTCTCTGCTCTCCG +
Preference number: 2 (lower is better)
Translates to: NECLEAEWREIATNKRPFARKCP*IRLCSP
Trigger: CGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGC...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 90 bp CTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTaGAGTGCGGTGTTACCACGTCGCCGCCACAAGGGGGCGATGAAA +
Preference number: 2 (lower is better)
Translates to: LHYVDAILLVDKLEA*SAVLPRRRHKGAMK
Trigger: TTTCATCGCCCCCTTGTGGCGGCGACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 90 bp GCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATCCTATaGGTTGACAAGTTGGAAGCCTTGAGTGCGGTGTTACCACGTCGC +
Preference number: 2 (lower is better)
Translates to: AGQGKGSLHYVDAIL*VDKLEALSAVLPRR
Trigger: GCGACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTGGTGGCTCAAAGTGGTaGGGACGCAGGGCCGACCCA +
Preference number: 2 (lower is better)
Translates to: QRNEADNLVEGVEGSSHIGGSKW*GRRADP
Trigger: TGGGTCGGCCCTGCGTCCTCACCACTTTGAGCCACC...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTGATGATTGTTGTGAGTaGGTGATAGATACACAGGGG +
Preference number: 2 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGDDCCE*VIDTQG
Trigger: CCCCTGTGTATCTATCACTCACTCACAACAATCATC...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTGCAGCGGCCAGAAAGTaGCCCTGGATCCGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: QRNEADNLVEGVEGSSHIAAARK*PWIRLC
Trigger: GCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTGCCACAAGGGGGCGATaGAACCCCGAACACATTCCA +
Preference number: 2 (lower is better)
Translates to: SLHYVDAILLVDKLEALSATRGR*NPEHIP
Trigger: TGGAATGTGTTCGGGGTTTCATCGCCCCCTTGTGGC...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATCACTATCACCATATATaGCATAACCCAGAGACCCAG +
Preference number: 2 (lower is better)
Translates to: CPARCRTREGKPSLRRCHHYHHI*HNPETQ
Trigger: CTGGGTCTCTGGGTTATGCCATATATGGTGATAGTG...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGAAACAAGCGGCCATTTaGGAGGAGAGTCATGCTAAC +
Preference number: 2 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQKQAAI*EESHAN
Trigger: GTTAGCATGACTCTCCTCCCAAATGGCCGCTTGTTT...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 90 bp AAAGGGGCACAGAGCACTTTGGTTAGCTTTGCTGTTACCATCCCATaGCTGTGGGTAAGTCACACAGGTAAAGTGGCTGCAGCCACTATC +
Preference number: 2 (lower is better)
Translates to: KGAQSTLVSFAVTIP*LWVSHTGKVAAATI
Trigger: GATAGTGGCTGCAGCCACTTTACCTGTGTGACTTACCCACAGCAATGGGATGGTAACAGCAAAGCTAACCAAAGTGCTCTGTGCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATCTTTGGAAACAGCCATaGGATACATTATCCTGTACG +
Preference number: 2 (lower is better)
Translates to: CPARCRTREGKPSLRRCHLWKQP*DTLSCT
Trigger: CGTACAGGATAATGTATCTCATGGCTGTTTCCAAAG...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTGAGCTGCCTGGTCCTTaGATCATCTCGGTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: NECLEAEWREIATNKRPFELPGP*IISVLH
Trigger: ATGCAAAACCGAGATGATTCAAGGACCAGGCAGCTC...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGAGCGTCATTGGACTCTaGTACTGGAGAAAATACGTG +
Preference number: 2 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQSVIGL*YWRKYV
Trigger: CACGTATTTTCTCCAGTAGCAGAGTCCAATGACGCT...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp ACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCACACCATCCCATTGCTGTaGGTAAGTCACACAGGTAAA +
Preference number: 2 (lower is better)
Translates to: TENKVCSCACSTSMPALHTIPLL*VSHTGK
Trigger: TTTACCTGTGTGACTTACCCACAGCAATGGGATGGT...GTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACCCTCTGAAAGCTGACTaGTATTCTAGTAGGGACTGT +
Preference number: 2 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDPLKAD*YSSRDC
Trigger: ACAGTCCCTACTAGAATATCAGTCAGCTTTCAGAGG...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTCACTTGAGGAAATTTTaGACACTGATCAGATTTTGG +
Preference number: 2 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGHLRKF*TLIRFW
Trigger: CCAAAATCTGATCAGTGTTCAAAATTTCCTCAAGTG...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATATTCTTGGGGGAGACTaGAACATTGGACTCCATCTG +
Preference number: 2 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYILGGD*NIGLHL
Trigger: CAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAAT...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTAGGATGAGGCCAACCTaGAATACTGACCTCAACCAT +
Preference number: 2 (lower is better)
Translates to: NECLEAEWREIATNKRPFRMRPT*NTDLNH
Trigger: ATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCT...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTACTGAAAGGTGGAGCTaGCTGGTCCTTGAATCATCT +
Preference number: 2 (lower is better)
Translates to: NECLEAEWREIATNKRPFTERWS*LVLESS
Trigger: AGATGATTCAAGGACCAGGCAGCTCCACCTTTCAGT...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 90 bp CAGTCAAATGAAAGTAGTGCACTGAAAGGTGGAGCTGCCTGGTCCTaGAATCATCTCGGTTTTGCATGGAGGAGTGGCAGCTGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: QSNESSALKGGAAWS*NHLGFAWRSGSCSF
Trigger: AAAAGAACAGCTGCCACTCCTCCATGCAAAACCGAGATGATTCAAGGACCAGGCAGCTCCACCTTTCAGTGCACTACTTTCATTTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACGAAGCAGGAAACAGATaGCTCAGTGTCACTACATAT +
Preference number: 2 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDEAGNR*LSVTTY
Trigger: ATATGTAGTGACACTGAGTCATCTGTTTCCTGCTTC...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACGTAGACATGGTAACATaGCACTACAGCAAAATGTGG +
Preference number: 2 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDVDMVT*HYSKMW
Trigger: CCACATTTTGCTGTAGTGGCATGTTACCATGTCTAC...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACCTGAAACAAAACTGCTaGCACAATAGGGCCTTGATT +
Preference number: 2 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDLKQNC*HNRALI
Trigger: AATCAAGGCCCTATTGTGCCAGCAGTTTTGTTTCAG...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTTTTTGCATGGAGGAGTaGCAGCTGTTCTTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: SLHYVDAILLVDKLEALSFCMEE*QLFFWG
Trigger: CCCCCAAAAGAACAGCTGCCACTCCTCCATGCAAAA...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATAAGTCATTTGTGGGGTaGTATCTTGTCACTCCTTTC +
Preference number: 2 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYKSFVG*YLVTPF
Trigger: GAAAGGAGTGACAAGATATCACCCCACAAATGACTT...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR TCA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTGGGTTGTGGTCATCATaGGACGGTAGATTACACTTG +
Preference number: 2 (lower is better)
Translates to: QRNEADNLVEGVEGSSHIGLWSS*DGRLHL
Trigger: CAAGTGTAATCTACCGTCTCATGATGACCACAACCC...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGGACTTATCCAAATCATaGAAATACGATGTGAACCTT +
Preference number: 2 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQDLSKS*KYDVNL
Trigger: AAGGTTCACATCGTATTTGCATGATTTGGATAAGTC...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTTCCAAGTCAAGTTTCTaGGGACCATATACAGCGACA +
Preference number: 2 (lower is better)
Translates to: SLHYVDAILLVDKLEALSSKSSF*GPYTAT
Trigger: TGTCGCTGTATATGGTCCGCAGAAACTTGACTTGGA...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATGTTCTCAGTCTCTGCTaGTCATTAGAAAAAGCTAAG +
Preference number: 2 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYVLSLC*SLEKAK
Trigger: CTTAGCTTTTTCTAATGAGCAGCAGAGACTGAGAAC...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTTCTTATAGCAAAATATaGAGCAAAGAGGCTCATACC +
Preference number: 2 (lower is better)
Translates to: NECLEAEWREIATNKRPFSYSKI*SKEAHT
Trigger: GGTATGAGCCTCTTTGCTGCATATTTTGCTATAAGA...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 90 bp GGAGAGACTATTCTTACCACAATAGTTGTTAACTACACAGTAACTTaGCTTTCCAAAACCAGAAGCACCCACCCCAAGAGCATGTTGGCT +
Preference number: 2 (lower is better)
Translates to: GETILTTIVVNYTVT*LSKTRSTHPKSMLA
Trigger: AGCCAACATGCTCTTGGGGTGGGTGCTTCTGGTTTTGGAAAGCAAAGTTACTGTGTAGTTAACAACTATTGTGGTAAGAATAGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR GCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATTGTTGGCTAGAATTATaGAAGAGATCATTCCTTGTA +
Preference number: 2 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYCWLEL*KRSFLV
Trigger: TACAAGGAATGATCTCTTGCATAATTCTAGCCAACA...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 90 bp ATTCGGTGGCTCCAAACTGTATCAGTATACGACTTTCTTTCAGTTTaGAAAGGTTCAAATCAGTTCCTTCTTTTAAAGGATTGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: IRWLQTVSVYDFLSV*KGSNQFLLLKDCVS
Trigger: ACTGACACAATCCTTTAAAAGAAGGAACTGATTTGAACCTTTCAAAACTGAAAGAAAGTCGTATACTGATACAGTTTGGAGCCACCGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp CCATCTGTTGAGCCCGAGCAGGCAGCGGCCAGAAAGTaGCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGG +
Preference number: 3 (lower is better)
Translates to: PSVEPEQAAARK*PWIRLCSPTLG
Trigger: CCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGCCTGCTCGGGCTCAACAGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp GTTGAGCCCGAGCAGGCAGCGGCCAGAAAGTGCCCCTaGATCCGTCTCTGCTCTCCGACTCTGGGGAGAACC +
Preference number: 3 (lower is better)
Translates to: VEPEQAAARKCP*IRLCSPTLGRT
Trigger: GGTTCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGCCTGCTCGGGCTCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp ACCCATAGTAGCCAGGAAGGGGACAGAAGGGGTCCCTaGGCCGGGACACTGTCCAGCACGCTGCAGGACAAG +
Preference number: 3 (lower is better)
Translates to: THSSQEGDRRGP*AGTLSSTLQDK
Trigger: CTTGTCCTGCAGCGTGCTGGACAGTGTCCCGGCTCAGGGACCCCTTCTGTCCCCTTCCTGGCTACTATGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp CAGGTCCCATTGCGGGAGAGACGCTGGGTCAAAGGGTaGCTCAAAGTGGTGAGGACGCAGGGCCGACCCATA +
Preference number: 3 (lower is better)
Translates to: QVPLRERRWVKG*LKVVRTQGRPI
Trigger: TATGGGTCGGCCCTGCGTCCTCACCACTTTGAGCCACCCTTTGACCCAGCGTCTCTCCCGCAATGGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp TCCCCATCCCACCAGGTCCCATTGCGGGAGAGACGCTaGGTCAAAGGGTGGCTCAAAGTGGTGAGGACGCAG +
Preference number: 3 (lower is better)
Translates to: SPSHQVPLRERR*VKGWLKVVRTQ
Trigger: CTGCGTCCTCACCACTTTGAGCCACCCTTTGACCCAGCGTCTCTCCCGCAATGGGACCTGGTGGGATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp GAAGGGGTCCCTGAGCCGGGACACTGTCCAGCACGCTaGAGGACAAGGGAAGGGAAGCCTTCACTACGTAGA +
Preference number: 3 (lower is better)
Translates to: EGVPEPGHCPAR*RTREGKPSLRR
Trigger: TCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACAGTGTCCCGGCTCAGGGACCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CAA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAGACAAGTTGGAAGCCTaGAGTGCGGTGTTACCACGT +
Preference number: 3 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRDKLEA*SAVLPR
Trigger: ACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTC...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CAA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAGTAGATGCCATCCTATaGGTTGACAAGTTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRVDAIL*VDKLEA
Trigger: GGCTTCCAACTTGTCAACCAATAGGATGGCATCTAC...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp GTGCGGTGTTACCACGTCGCCGCCACAAGGGGGCGATaGAACCCCGAACACATTCCAAGTCAAGTTTCTGCG +
Preference number: 3 (lower is better)
Translates to: VRCYHVAATRGR*NPEHIPSQVSA
Trigger: CGCAGAAACTTGACTTGGAATGTGTTCGGGGTTTCATCGCCCCCTTGTGGCGGCGACGTGGTAACACCGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp TTCTTGGGGGAGACTGAAACATTGGACTCCATCTGTTaGGCCCGAGCAGGCAGCGGCCAGAAAGTGCCCCTG +
Preference number: 3 (lower is better)
Translates to: FLGETETLDSIC*ARAGSGQKVPL
Trigger: CAGGGGCACTTTCTGGCCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp CCACTGGAGAGGCATTGGGTGGCCAGTCTCCCCACATaGAACCCAAAGGGGCACAGAGCACTTTGGTTAGCT +
Preference number: 3 (lower is better)
Translates to: PLERHWVASLPT*NPKGHRALWLA
Trigger: AGCTAACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAATGCCTCTCCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp TCCATGCCAGCTCTGCACAATCCCAAGTGGTCACAGTaGCCTCACACCGTGGGCAGAACTCACAGCCGTTCT +
Preference number: 3 (lower is better)
Translates to: SMPALHNPKWSQ*PHTVGRTHSRS
Trigger: AGAACGGCTGTGAGTTCTGCCCACGGTGTGAGGCCACTGTGACCACTTGGGATTGTGCAGAGCTGGCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp TGTTCAACCTCCATGCCAGCTCTGCACAATCCCAAGTaGTCACAGTGGCCTCACACCGTGGGCAGAACTCAC +
Preference number: 3 (lower is better)
Translates to: CSTSMPALHNPK*SQWPHTVGRTH
Trigger: GTGAGTTCTGCCCACGGTGTGAGGCCACTGTGACCACTTGGGATTGTGCAGAGCTGGCATGGAGGTTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp AGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATaGCACTGGTATCTGATGGGCTTCTGGGGACGCCTC +
Preference number: 3 (lower is better)
Translates to: SWLTVPWAVQEA*HWYLMGFWGRL
Trigger: GAGGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp CTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTaGTATCTGATGGGCTTCTGGGGACGCCTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: LTVPWAVQEAWH*YLMGFWGRLRK
Trigger: TTTCCTGAGGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp CACATCTCTCCCCGCACCCAGCTCCCGTGTCAGCAATaGGGATACACATTCTTGGGGGAGACTGAAACATTG +
Preference number: 3 (lower is better)
Translates to: HISPRTQLPCQQ*GYTFLGETETL
Trigger: CAATGTTTCAGTCTCCCCCAAGAATGTGTATCCTCATTGCTGACACGGGAGCTGGGTGCGGGGAGAGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp TTCCATGGGCTGTACAGGAAGCATGGCACTGGTATCTaGTGGGCTTCTGGGGACGCCTCAGGAAACTTACAG +
Preference number: 3 (lower is better)
Translates to: FHGLYRKHGTGI*WASGDASGNLQ
Trigger: CTGTAAGTTTCCTGAGGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATGCTTCCTGTACAGCCCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp AAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATaGCAGCTCTGCACAATCCCAAGTGGTCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: KTRCAAVRVQPP*QLCTIPSGHSG
Trigger: GCCACTGTGACCACTTGGGATTGTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp AATGAGGATACACATTCTTGGGGGAGACTGAAACATTaGACTCCATCTGTTGAGCCCGAGCAGGCAGCGGCC +
Preference number: 3 (lower is better)
Translates to: NEDTHSWGRLKH*TPSVEPEQAAA
Trigger: GGCCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAATGTGTATCCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp CCCCACTGTCCTGTTAATGAATGTCTGGAGGCTGAGTaGCGGGAGATTGCAACAAACAAGCGGCCATTTGGG +
Preference number: 3 (lower is better)
Translates to: PHCPVNECLEAE*REIATNKRPFG
Trigger: CCCAAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATTAACAGGACAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp GTACAGGAAGCATGGCACTGGTATCTGATGGGCTTCTaGGGACGCCTCAGGAAACTTACAGCCATGGCAGAA +
Preference number: 3 (lower is better)
Translates to: VQEAWHWYLMGF*GRLRKLTAMAE
Trigger: TTCTGCCATGGCTGTAAGTTTCCTGAGGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATGCTTCCTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp TGGGCAGAACTCACAGCCGTTCTCATACTAGCAGGATaGGGCCAACCTGCAATACTGACCTCAACCATGACC +
Preference number: 3 (lower is better)
Translates to: WAELTAVLILAG*GQPAILTSTMT
Trigger: GGTCATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTGAGTTCTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp GGAAACTTACAGCCATGGCAGAAAGCAAAAGGGGAGTaGGCACTCCACATGGCCAAAGCAGGAGCAAGAGAG +
Preference number: 3 (lower is better)
Translates to: GNLQPWQKAKGE*ALHMAKAGARE
Trigger: CTCTCTTGCTCCTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTAAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp CACAGCCGTTCTCATACTAGCAGGATGAGGCCAACCTaGAATACTGACCTCAACCATGACCCTCACAGTCGT +
Preference number: 3 (lower is better)
Translates to: HSRSHTSRMRPT*NTDLNHDPHSR
Trigger: ACGACTGTGAGGGTCATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCTGCTAGTATGAGAACGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CAA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACGCTGTTACCATCCCATaGCTGTGGGTAAGTCACACA +
Preference number: 3 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDAVTIP*LWVSHT
Trigger: TGTGTGACTTACCCACAGCAATGGGATGGTAACAGC...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CAA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATGGGGCACAGAGCACTTaGGTTAGCTTTGCTGTTACC +
Preference number: 3 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYGAQST*VSFAVT
Trigger: GGTAACAGCAAAGCTAACCAAAGTGCTCTGTGCCCC...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp GGGAAGCCTTCACTACGTAGATGCCATCCTATTGGTTaGCAAGTTGGAAGCCTTGAGTGCGGTGTTACCACG +
Preference number: 3 (lower is better)
Translates to: GKPSLRRCHPIG*QVGSLECGVTT
Trigger: CGTGGTAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp GCGATGAAACCCCGAACACATTCCAAGTCAAGTTTCTaGGGACCATATACAGCGACAACGCTCTTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: AMKPRTHSKSSF*GPYTATTLFPR
Trigger: CCTTGGGAAGAGCGTTGTCGCTGTATATGGTCCGCAGAAACTTGACTTGGAATGTGTTCGGGGTTTCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp ATTATCACAATGGCAATAACACTCATGACAATGGGCTaGTCAGGCAAGGGTCCCCACCACCACATCTCTCCC +
Preference number: 3 (lower is better)
Translates to: IITMAITLMTMG*SGKGPHHHISP
Trigger: GGGAGAGATGTGGTGGTGGGGACCCTTGCCTGAGCAGCCCATTGTCATGAGTGTTATTGCCATTGTGATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp CCCAGCTCCCGTGTCAGCAATGAGGATACACATTCTTaGGGGAGACTGAAACATTGGACTCCATCTGTTGAG +
Preference number: 3 (lower is better)
Translates to: PSSRVSNEDTHS*GRLKHWTPSVE
Trigger: CTCAACAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAATGTGTATCCTCATTGCTGACACGGGAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CAA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGTTGTCACTCCTTTCCTaGCATTCACTCCACACGATT +
Preference number: 3 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQLSLLS*HSLHTI
Trigger: AATCGTGTGGAGTGAATGCAAGGAAAGGAGTGACAA...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp GAAGTGCCAGATCTCATGAGAACTCACTATCATGAGTaGAGTACCAAGAGGGGATGGCCCCCACGATCCAAT +
Preference number: 3 (lower is better)
Translates to: EVPDLMRTHYHE*STKRGWPPRSN
Trigger: ATTGGATCGTGGGGGCCATCCCCTCTTGGTACTTCACTCATGATAGTGAGTTCTCATGAGATCTGGCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CAA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATGCACTTTGGTTAGCTTaGCTGTTACCATCCCATTGC +
Preference number: 3 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYALWLA*LLPSHC
Trigger: GCAATGGGATGGTAACAGCAAAGCTAACCAAAGTGC...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp CCAGGATCCACCTCCATTAGGGAATACGGTTCAACATaGCATTCGGTGGCTCCAAACTGTATCAGTATACGA +
Preference number: 3 (lower is better)
Translates to: PGSTSIREYGST*HSVAPNCISIR
Trigger: TCGTATACTGATACAGTTTGGAGCCACCGAATGTCATGTTGAACCGTATTCCCTAATGGAGGTGGATCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp GAAGCACCCACCCCAAGAGCATGTTGGCTAGAATTATaGAAGAGATCATTCCTTGTAGAATCTAGTCCGCCA +
Preference number: 3 (lower is better)
Translates to: EAPTPRACWLEL*KRSFLVESSPP
Trigger: TGGCGGACTAGATTCTACAAGGAATGATCTCTTGCATAATTCTAGCCAACATGCTCTTGGGGTGGGTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR-3UTR CAA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACGCCACCCCTAATGTTTaGATAAGGATATTTCATTCA +
Preference number: 3 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDATPNV*IRIFHS
Trigger: TGAATGAAATATCCTTATCAAAACATTAGGGGTGGC...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp AGTTTTCCCTTCGTAATGGGTAAGTCATTTGTGGGGTaGTATCTTGTCACTCCTTTCCTTGCATTCACTCCA +
Preference number: 3 (lower is better)
Translates to: SFPFVMGKSFVG*YLVTPFLAFTP
Trigger: TGGAGTGAATGCAAGGAAAGGAGTGACAAGATATCACCCCACAAATGACTTACCCATTACGAAGGGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CCA 72 bp CCTCCATTAGGGAATACGGTTCAACATGACATTCGGTaGCTCCAAACTGTATCAGTATACGACTTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: PPLGNTVQHDIR*LQTVSVYDFLS
Trigger: TGAAAGAAAGTCGTATACTGATACAGTTTGGAGCCACCGAATGTCATGTTGAACCGTATTCCCTAATGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR GCA 72 bp AAAATAGCCATCATAGAAGGCTTAACATTTACTGAGTaGTTCTTATTGTTAGGGACCAAGAGTAACACTGAA +
Preference number: 3 (lower is better)
Translates to: KIAIIEGLTFTE*FLLLGTKSNTE
Trigger: TTCAGTGTTACTCTTGGTCCCTAACAATAAGAAGCACTCAGTAAATGTTAAGCCTTCTATGATGGCTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR TCA 72 bp AAATATGCAGCAAAGAGGCTCATACCATTATGGTTTTaGGATGATTCATACATATTGCAAGCAAAATGGCTT +
Preference number: 3 (lower is better)
Translates to: KYAAKRLIPLWF*DDSYILQAKWL
Trigger: AAGCCATTTTGCTTGCAATATGTATGAATCATCTCAAAACCATAATGGTATGAGCCTCTTTGCTGCATATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAGCAGCGGCCAGAAAGTaGCCCTGGATCCGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRAAARK*PWIRLC
Trigger: GCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAAAACCTCAGGATGCCTaGACAGCACTCCAGACCAGT +
Preference number: 4 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRKPQDA*TALQTS
Trigger: ACTGGTCTGGAGTGCTGTTCAGGCATCCTGAGGTTT...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTCATGGCACTGGTATCTaGTGGGCTTCTGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGHGTGI*WASGDA
Trigger: GGCGTCCCCAGAAGCCCATCAGATACCAGTGCCATG...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAGGGTTGTGGTCATCATaGGACGGTAGATTACACTTG +
Preference number: 4 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRGLWSS*DGRLHL
Trigger: CAAGTGTAATCTACCGTCTCATGATGACCACAACCC...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACGGTGGCTCAAAGTGGTaGGGACGCAGGGCCGACCCA +
Preference number: 4 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDGGSKW*GRRADP
Trigger: TGGGTCGGCCCTGCGTCCTCACCACTTTGAGCCACC...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTGTTGGAAGCCTTGAGTaGGGTGTTACCACGTCGCCG +
Preference number: 4 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGVGSLE*GVTTSP
Trigger: CGGCGACGTGGTAACACCGCACTCAAGGCTTCCAAC...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACTTGGACTCCATCTGTTaGGCCCGAGCAGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDLDSIC*ARAGSG
Trigger: GCCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAA...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAAGCGTCATTGGACTCTaGTACTGGAGAAAATACGTG +
Preference number: 4 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRSVIGL*YWRKYV
Trigger: CACGTATTTTCTCCAGTAGCAGAGTCCAATGACGCT...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAACCATCCCATTGCTGTaGGTAAGTCACACAGGTAAA +
Preference number: 4 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRTIPLL*VSHTGK
Trigger: TTTACCTGTGTGACTTACCCACAGCAATGGGATGGT...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp CATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTGGCTCACAGTTCCATaGGCTGTACAGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: HWVASLPTCNPKGHRALWWLTVP*AVQEAW
Trigger: CCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCA...CCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATCTGCACAATCCCAAGTaGTCACAGTGGCCTCACACC +
Preference number: 4 (lower is better)
Translates to: CPARCRTREGKPSLRRCHLHNPK*SQWPHT
Trigger: GGTGTGAGGCCACTGTGACCACTTGGGATTGTGCAG...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGCGCTGGGTCAAAGGGTaGCTCAAAGTGGTGAGGACG +
Preference number: 4 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQRWVKG*LKVVRT
Trigger: CGTCCTCACCACTTTGAGCCACCCTTTGACCCAGCG...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACGCCAGAAAGTGCCCCTaGATCCGTCTCTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDARKCP*IRLCSP
Trigger: CGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGC...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp GTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTaGAGTGCGGTGTTACCACGTCGCCGCCACAAGGGG +
Preference number: 4 (lower is better)
Translates to: VDAILLVDKLEA*SAVLPRRRHKG
Trigger: CCCCTTGTGGCGGCGACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTTCCCACTTCACCACCTaGAACAAAACTGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGSHFTT*NKTAGT
Trigger: TGTGCCAGCAGTTTTGTTTCAGGTGGTGAAGTGGGA...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp ACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCACAGGAGCAAGAGAGAGTaGGGGGTGAAGTGCCAGATC +
Preference number: 4 (lower is better)
Translates to: TENKVCSCACSTSMPALHRSKRE*GVKCQI
Trigger: GATCTGGCACTTCACCCCTCACTCTCTCTTGCTCCT...GTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCCACTGTCCAGCACGCTaGAGGACAAGGGAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KLKTRCAAVRVQPPCQLCHCPAR*RTREGK
Trigger: CTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACAGTG...GCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATCCCTGGATCCGTCTCTaGTCTCCGACTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYPWIRL*SPTLGR
Trigger: TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGG...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATAGTGAGCACTCCACATaGCCAAAGCAGGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CPARCRTREGKPSLRRCHSEHST*PKQEQE
Trigger: CTCTTGCTCCTGCTTTGGCCATGTGGAGTGCTCACT...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTGCCACAAGGGGGCGATaGAACCCCGAACACATTCCA +
Preference number: 4 (lower is better)
Translates to: NECLEAEWREIATNKRPFATRGR*NPEHIP
Trigger: TGGAATGTGTTCGGGGTTTCATCGCCCCCTTGTGGC...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATTCTAGTCCGCCAACTTaGATCGTCTTCTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: CPARCRTREGKPSLRRCHSSPPT*IVFCQH
Trigger: ATGCTGGCAGAAGACGATTCAAGTTGGCGGACTAGA...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp CATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTCAGAATCTCTAGGATaGGAGCCAGGCATTAGTAGT +
Preference number: 4 (lower is better)
Translates to: HWVASLPTCNPKGHRALWSESLG*EPGISS
Trigger: ACTACTAATGCCTGGCTCTCATCCTAGAGATTCTGA...CCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp GACAGTAACTGCCCAGATCCAGTAGCAAGGACTGTCACCCCAGTGGTAGGGGAGAGGATGAGGCCAACCTaGAATACTGACCTCAACCAT +
Preference number: 4 (lower is better)
Translates to: DSNCPDPVARTVTPVVGERMRPT*NTDLNH
Trigger: ATGGTTGAGGTCAGTATTGCAGGTTGGCCTCATCCT...CTCCCCTACCACTGGGGTGACAGTCCTTGCTACTGGATCTGGGCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp ACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCACCGTGTTCAACCTCCATaGCAGCTCTGCACAATCCCA +
Preference number: 4 (lower is better)
Translates to: TENKVCSCACSTSMPALHRVQPP*QLCTIP
Trigger: TGGGATTGTGCAGAGCTGGCATGGAGGTTGAACACG...GTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp CATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTGTCACTCCTTTCCTTaGATTCACTCCACACGATTC +
Preference number: 4 (lower is better)
Translates to: HWVASLPTCNPKGHRALWCHSFP*IHSTRF
Trigger: GAATCGTGTGGAGTGAATGCAAGGAAAGGAGTGACA...CCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp AAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCTTGCGGGAGAGACGCTaGGTCAAAGGGTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: KLKTRCAAVRVQPPCQLCLRERR*VKGWLK
Trigger: TTTGAGCCACCCTTTGACCCAGCGTCTCTCCCGCAA...GCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATGGGAGACTGAAACATTaGACTCCATCTGTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: CPARCRTREGKPSLRRCHGRLKH*TPSVEP
Trigger: GGGCTCAACAGATGGAGTCCAATGTTTCAGTCTCCC...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp TCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTaGGTTAGCTTTGCTGTTACCATCCCATTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPHMQPKGAQST*VSFAVTIPLLW
Trigger: CCACAGCAATGGGATGGTAACAGCAAAGCTAACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp GAAAGTAGTGCACTGAAAGGTGGAGCTGCCTGGTCCTaGAATCATCTCGGTTTTGCATGGAGGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ESSALKGGAAWS*NHLGFAWRSGS
Trigger: GCTGCCACTCCTCCATGCAAAACCGAGATGATTCAAGGACCAGGCAGCTCCACCTTTCAGTGCACTACTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp CTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTaGGAAGCCTTGAGTGCGGTGTTACCACGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: LHYVDAILLVDK*EALSAVLPRRR
Trigger: GCGGCGACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp TGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAACCTaGGGAAGAAGAGACTCAAAAGTTCTACCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WIRLCSPTLGRT*GRRDSKVLPLL
Trigger: CAGGAGAGGTAGAACTTTTGAGTCTCTTCTTCCCAAGGTTCTCCCCAGAGTCGGAGAGCAGAGACGGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp ACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCACGAGCTGCCTGGTCCTTaGATCATCTCGGTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: TENKVCSCACSTSMPALHELPGP*IISVLH
Trigger: ATGCAAAACCGAGATGATTCAAGGACCAGGCAGCTC...GTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATATTCTTGGGGGAGACTaGAACATTGGACTCCATCTG +
Preference number: 4 (lower is better)
Translates to: CPARCRTREGKPSLRRCHILGGD*NIGLHL
Trigger: CAGATGGAGTCCAATGTTTCAGTCTCCCCCAAGAAT...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGGAATCATCTCGGTTTTaGATGGAGGAGTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQESSRF*MEEWQL
Trigger: CAGCTGCCACTCCTCCATGCAAAACCGAGATGATTC...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTCCCAAGTGGTCACAGTaGCCTCACACCGTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSPKWSQ*PHTVGR
Trigger: TCTGCCCACGGTGTGAGGCCACTGTGACCACTTGGG...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATCTCCCGTGTCAGCAATaGGGATACACATTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYLPCQQ*GYTFLG
Trigger: CCCCAAGAATGTGTATCCTCATTGCTGACACGGGAG...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp GACAGTAACTGCCCAGATCCAGTAGCAAGGACTGTCACCCCAGTGGTAGGGGAGGTAGACATGGTAACATaGCACTACAGCAAAATGTGG +
Preference number: 4 (lower is better)
Translates to: DSNCPDPVARTVTPVVGEVDMVT*HYSKMW
Trigger: CCACATTTTGCTGTAGTGGCATGTTACCATGTCTAC...CTCCCCTACCACTGGGGTGACAGTCCTTGCTACTGGATCTGGGCAGTTACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGACTGAAAGGTGGAGCTaGCTGGTCCTTGAATCATCT +
Preference number: 4 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQTERWS*LVLESS
Trigger: AGATGATTCAAGGACCAGGCAGCTCCACCTTTCAGT...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATTCCAAGTCAAGTTTCTaGGGACCATATACAGCGACA +
Preference number: 4 (lower is better)
Translates to: CPARCRTREGKPSLRRCHSKSSF*GPYTAT
Trigger: TGTCGCTGTATATGGTCCGCAGAAACTTGACTTGGA...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTCTCATGACAATGGGCTaGTCAGGCAAGGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSLMTMG*SGKGPH
Trigger: GTGGGGACCCTTGCCTGAGCAGCCCATTGTCATGAG...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTCTGAAACAAAACTGCTaGCACAATAGGGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGLKQNC*HNRALI
Trigger: AATCAAGGCCCTATTGTGCCAGCAGTTTTGTTTCAG...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp AAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCTTTTGCATGGAGGAGTaGCAGCTGTTCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KLKTRCAAVRVQPPCQLCFCMEE*QLFFWG
Trigger: CCCCCAAAAGAACAGCTGCCACTCCTCCATGCAAAA...GCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATTCTGCTCTCCGACTCTaGGGAGAACCTTGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYSALRL*GEPWEE
Trigger: TTCTTCCCAAGGTTCTCCCCAGAGTCGGAGAGCAGA...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTTGGGTAAGTCATTTGTaGGGTGATATCTTGTCACTC +
Preference number: 4 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGWVSHL*GDILSL
Trigger: GAGTGACAAGATATCACCCCACAAATGACTTACCCA...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp GCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATaGGACTCTGCTACTGGAGAAAATACGTGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: APPPLIRKSRAS*DSATGENTCLA
Trigger: AGCTAGGCACGTATTTTCTCCAGTAGCAGAGTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp CTGTTAATGAATGTCTGGAGGCTGAGTGGCGGGAGATaGCAACAAACAAGCGGCCATTTGGGAGGAGAGTCA +
Preference number: 4 (lower is better)
Translates to: LLMNVWRLSGGR*QQTSGHLGGES
Trigger: TGACTCTCCTCCCAAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATTAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACACTCACTATCATGAGTaGAGTACCAAGAGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDTHYHE*STKRGW
Trigger: CCATCCCCTCTTGGTACTTCACTCATGATAGTGAGT...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp GACAGTAACTGCCCAGATCCAGTAGCAAGGACTGTCACCCCAGTGGTAGGGGAGGTTCTCAGTCTCTGCTaGTCATTAGAAAAAGCTAAG +
Preference number: 4 (lower is better)
Translates to: DSNCPDPVARTVTPVVGEVLSLC*SLEKAK
Trigger: CTTAGCTTTTTCTAATGAGCAGCAGAGACTGAGAAC...CTCCCCTACCACTGGGGTGACAGTCCTTGCTACTGGATCTGGGCAGTTACTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTTGGAGAGGCATTGGGTaGCCAGTCTCCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: QRNEADNLVEGVEGSSHIWRGIG*PVSPHA
Trigger: TGCATGTGGGGAGACTGGCCACCCAATGCCTCTCCA...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp AAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCAGTCCAGAGCGTCATTaGACTCTGCTACTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KLKTRCAAVRVQPPCQLCSPERH*TLLLEK
Trigger: TTTCTCCAGTAGCAGAGTCCAATGACGCTCTGGACT...GCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGGAGGATACACATTCTTaGGGGAGACTGAAACATTGG +
Preference number: 4 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQEDTHS*GRLKHW
Trigger: CCAATGTTTCAGTCTCCCCCAAGAATGTGTATCCTC...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp GGGAAGGGAAGCCTTCACTACGTAGATGCCATCCTATaGGTTGACAAGTTGGAAGCCTTGAGTGCGGTGTTA +
Preference number: 4 (lower is better)
Translates to: GKGSLHYVDAIL*VDKLEALSAVL
Trigger: TAACACCGCACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCTTCCCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGCTTTGGAAACAGCCATaGGATACATTATCCTGTACG +
Preference number: 4 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQLWKQP*DTLSCT
Trigger: CGTACAGGATAATGTATCTCATGGCTGTTTCCAAAG...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTACAAGTTGGAAGCCTTaGGTGCGGTGTTACCACGTC +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSTSWKP*VRCYHV
Trigger: GACGTGGTAACACCGCACTCAAGGCTTCCAACTTGT...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGACTCAGATGTTAGTGTaGCCTCTTAGAAAATTGGGC +
Preference number: 4 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQTQMLV*PLRKLG
Trigger: GCCCAATTTTCTAAGAGGTCACACTAACATCTGAGT...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp CATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGGACTTATCCAAATCATaGAAATACGATGTGAACCTT +
Preference number: 4 (lower is better)
Translates to: HWVASLPTCNPKGHRALWDLSKS*KYDVNL
Trigger: AAGGTTCACATCGTATTTGCATGATTTGGATAAGTC...CCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTACAGGTAACCCCAAATaGCTGAGCCTCCTTCACCGA +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSTGNPK*LSLLHR
Trigger: TCGGTGAAGGAGGCTCAGGCATTTGGGGTTACCTGT...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATCACCTGAAACAAAACTaGTGGCACAATAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYHLKQN*WHNRAL
Trigger: CAAGGCCCTATTGTGCCAGCAGTTTTGTTTCAGGTG...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACATTGGACTCTGCTACTaGAGAAAATACGTGCCTAGC +
Preference number: 4 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDIGLCY*RKYVPS
Trigger: GCTAGGCACGTATTTTCTCCAGTAGCAGAGTCCAAT...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTTGTCTGGAGGCTGAGTaGCGGGAGATTGCAACAAAC +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSCLEAE*REIATN
Trigger: GTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACA...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTCTAAGTTTAATCACTTaGTTAGTGACTGACAGACCT +
Preference number: 4 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGLSLIT*LVTDRP
Trigger: AGGTCTGTCAGTCACTAACCAAGTGATTAAACTTAG...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp CAGAGCACTTTGGTTAGCTTTGCTGTTACCATCCCATaGCTGTGGGTAAGTCACACAGGTAAAGTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QSTLVSFAVTIP*LWVSHTGKVAA
Trigger: TGCAGCCACTTTACCTGTGTGACTTACCCACAGCAATGGGATGGTAACAGCAAAGCTAACCAAAGTGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGGTTTAGTTGGCTCACAGTTCCATGGGCTGTACAGGAAGCATGGCACTGGTATGATGATTGTTGTGAGTaGGTGATAGATACACAGGGG +
Preference number: 4 (lower is better)
Translates to: RFSWLTVPWAVQEAWHWYDDCCE*VIDTQG
Trigger: CCCCTGTGTATCTATCACTCACTCACAACAATCATC...ATACCAGTGCCATGCTTCCTGTACAGCCCATGGAACTGTGAGCCAACTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTTTCTGCCAGCATCCATaGGACAGTAACTGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSFCQHP*DSNCPD
Trigger: ATCTGGGCAGTTACTGTCTCATGGATGCTGGCAGAA...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGTCTGGGCCTGATTTCTaGGAAATCATACTAGATTTC +
Preference number: 4 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQSGPDF*EIILDF
Trigger: GAAATCTAGTATGATTTCTCAGAAATCAGGCCCAGA...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTAAGTGCAAGCAAGGATaGAAGCCACTGCTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSKCKQG*KPLLSG
Trigger: TCCTGAGAGCAGTGGCTTTCATCCTTGCTTGCACTT...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp GGAAAAACTTCCGCCCCACCACCACTAATTAGGAAGTCCAGAGCGTCATTGGACAAGTCATTTGTGGGGTaGTATCTTGTCACTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GKTSAPPPLIRKSRASLDKSFVG*YLVTPF
Trigger: GAAAGGAGTGACAAGATATCACCCCACAAATGACTT...GTCCAATGACGCTCTGGACTTCCTAATTAGTGGTGGTGGGGCGGAAGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTTGTTGGCTAGAATTATaGAAGAGATCATTCCTTGTA +
Preference number: 4 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGCWLEL*KRSFLV
Trigger: TACAAGGAATGATCTCTTGCATAATTCTAGCCAACA...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTTTTAAAACCTCAGGATaGCTGAACAGCACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NECLEAEWREIATNKRPFFKTSG*LNSTPD
Trigger: GTCTGGAGTGCTGTTCAGGCATCCTGAGGTTTTAAA...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTTGCCATCCTATTGGTTaGCAAGTTGGAAGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSCHPIG*QVGSLE
Trigger: CTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCA...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTACTGAAAACAAGGTGTaGAGCTGTGCGTGTTCAACC +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSTENKV*SCACST
Trigger: GGTTGAACACGCACAGCTGCACACCTTGTTTTCAGT...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTAAACAAGCGGCCATTTaGGAGGAGAGTCATGCTAAC +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSKQAAI*EESHAN
Trigger: GTTAGCATGACTCTCCTCCCAAATGGCCGCTTGTTT...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTCCTCTGAAAGCTGACTaGTATTCTAGTAGGGACTGT +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSPLKAD*YSSRDC
Trigger: ACAGTCCCTACTAGAATATCAGTCAGCTTTCAGAGG...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCTATTCAGAAGGCATCTaGAGTTGTATGGCACTTAAT +
Preference number: 4 (lower is better)
Translates to: KLKTRCAAVRVQPPCQLCYSEGI*SCMALN
Trigger: ATTAAGTGCCATACAACTTCAGATGCCTTCTGAATA...GCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTGGGCACAGAGCACTTTaGTTAGCTTTGCTGTTACCA +
Preference number: 4 (lower is better)
Translates to: QRNEADNLVEGVEGSSHIGHRAL*LALLLP
Trigger: TGGTAACAGCAAAGCTAACCAAAGTGCTCTGTGCCC...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CCA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTAGCCACATTTTTCTCTaGGGTCCAAAACTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QRNEADNLVEGVEGSSHISHIFL*GPKLAV
Trigger: CACAGCCAGTTTTGGACCCCAGAGAAAAATGTGGCT...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTAAGGATGAAAGCCACTaGTCTCAGGAATGTCATTTC +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSKDESH*SQECHF
Trigger: GAAATGACATTCCTGAGAGCAGTGGCTTTCATCCTT...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTGAAGCAGGAAACAGATaGCTCAGTGTCACTACATAT +
Preference number: 4 (lower is better)
Translates to: QRNEADNLVEGVEGSSHIEAGNR*LSVTTY
Trigger: ATATGTAGTGACACTGAGTCATCTGTTTCCTGCTTC...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR TCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTCACTTGAGGAAATTTTaGACACTGATCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSHLRKF*TLIRFW
Trigger: CCAAAATCTGATCAGTGTTCAAAATTTCCTCAAGTG...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTTCTTATAGCAAAATATaGAGCAAAGAGGCTCATACC +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSSYSKI*SKEAHT
Trigger: GGTATGAGCCTCTTTGCTGCATATTTTGCTATAAGA...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR GCA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTAGTCCATTGTTGCATTaGTATAAAAAGTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLHYVDAILLVDKLEALSSPLLH*YKKCLR
Trigger: TCTCAGGCACTTTTTATAGCAATGCAACAATGGACT...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369498.8
3UTR CAA 72 bp ATTCTTACCACAATAGTTGTTAACTACACAGTAACTTaGCTTTCCAAAACCAGAAGCACCCACCCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ILTTIVVNYTVT*LSKTRSTHPKS
Trigger: GCTCTTGGGGTGGGTGCTTCTGGTTTTGGAAAGCAAAGTTACTGTGTAGTTAACAACTATTGTGGTAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS CCA 90 bp GCGCCGGAAGGCTGGGTGAGCTCCACTGGAGACGACACCCCAGGGTaGTTAGGCCCCAGACACGCGCGTGACCTTGGCCGGACCCTGGGA +
Preference number: 5 (lower is better)
Translates to: APEGWVSSTGDDTPG*LGPRHARDLGRTLG
Trigger: TCCCAGGGTCCGGCCAAGGTCACGCGCGTGTCTGGGGCCTAACCACCCTGGGGTGTCGTCTCCAGTGGAGCTCACCCAGCCTTCCGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484175.5
CDS TCA 90 bp GGTGGTGGTGAAGTCCCCTGGGTGGCCCAGGCCAGGATTGCGAGGTaGCTTCCTGCTCTCCTTGGCATTACTGGGGGACTGCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: GGGEVPWVAQARIAR*LPALLGITGGLHCR
Trigger: CCTGCAGTGCAGTCCCCCAGTAATGCCAAGGAGAGCAGGAAGTCACCTCGCAATCCTGGCCTGGGCCACCCAGGGGACTTCACCACCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS-3UTR CAA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAATTGGACTCCATCTGTaGAGCCCGAGCAGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRIGLHL*SPSRQR
Trigger: CCGCTGCCTGCTCGGGCTCAACAGATGGAGTCCAAT...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAAAGTCCAGAGCGTCATaGGACTCTGCTACTGGAGAA +
Preference number: 5 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRKSRAS*DSATGE
Trigger: TTCTCCAGTAGCAGAGTCCAATGACGCTCTGGACTT...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS GCA 90 bp CAGGGGCAAAGCAACACCAGAACTGGGAAAAGCAGCCTCTCCCGCTaGAAGGTCCCTCCAGCGCCCTCTACTGACAAAGCTCAACATCCT +
Preference number: 5 (lower is better)
Translates to: QGQSNTRTGKSSLSR*KVPPAPSTDKAQHP
Trigger: AGGATGTTGAGCTTTGTCAGTAGAGGGCGCTGGAGGGACCTTGCAGCGGGAGAGGCTGCTTTTCCCAGTTCTGGTGTTGCTTTGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS-3UTR CAA 90 bp ATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGTCTGAGTGGCGGGAGATaGCAACAAACAAGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: IGWPVSPHATQRGTEHFGLSGGR*QQTSGH
Trigger: ATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAG...ACCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGAAATGAAGCTGATAATTaGGTAGAGGGAGTAGAGGGC +
Preference number: 5 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRNEADN*VEGVEG
Trigger: GCCCTCTACTCCCTCTACCAAATTATCAGCTTCATT...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp GCAGCGGCCAGAAAGTGCCCCTGGATCCGTCTCTGCTCTCCGACTCTGGGGAGATTGTGGGGTGATATCTaGTCACTCCTTTCCTTGCAT +
Preference number: 5 (lower is better)
Translates to: AAARKCPWIRLCSPTLGRLWGDI*SLLSLH
Trigger: ATGCAAGGAAAGGAGTGACAAGATATCACCCCACAA...TCTCCCCAGAGTCGGAGAGCAGAGACGGATCCAGGGGCACTTTCTGGCCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp GACAGTAACTGCCCAGATCCAGTAGCAAGGACTGTCACCCCAGTGGTAGGGGAGGGGGCACAGAGCACTTaGGTTAGCTTTGCTGTTACC +
Preference number: 5 (lower is better)
Translates to: DSNCPDPVARTVTPVVGEGAQST*VSFAVT
Trigger: GGTAACAGCAAAGCTAACCAAAGTGCTCTGTGCCCC...CTCCCCTACCACTGGGGTGACAGTCCTTGCTACTGGATCTGGGCAGTTACTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp AGCCTTCACTACGTAGATGCCATCCTATTGGTTGACAAGTTGGAAGCCTTGAGTCCCACTGGAGAGGCATaGGGTGGCCAGTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: SLHYVDAILLVDKLEALSPTGEA*GGQSPH
Trigger: GTGGGGAGACTGGCCACCCAATGCCTCTCCAGTGGG...ACTCAAGGCTTCCAACTTGTCAACCAATAGGATGGCATCTACGTAGTGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp CATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGCACCCCAAGAGCATGTaGGCTAGAATTATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: HWVASLPTCNPKGHRALWHPKSM*ARIMQE
Trigger: CTCTTGCATAATTCTAGCCAACATGCTCTTGGGGTG...CCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS TCA 90 bp GAAAAGCAGCCTCTCCCGCTGCAAGGTCCCTCCAGCGCCCTCTACTaGCAAAGCTCAACATCCTACTTCCATTGCAGCACAACAAGTAGA +
Preference number: 5 (lower is better)
Translates to: EKQPLPLQGPSSALY*QSSTSYFHCSTTSR
Trigger: TCTACTTGTTGTGCTGCAATGGAAGTAGGATGTTGAGCTTTGTCAGTAGAGGGCGCTGGAGGGACCTTGCAGCGGGAGAGGCTGCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS-3UTR CAA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATGCTGTTACCATCCCATaGCTGTGGGTAAGTCACACA +
Preference number: 5 (lower is better)
Translates to: CPARCRTREGKPSLRRCHAVTIP*LWVSHT
Trigger: TGTGTGACTTACCCACAGCAATGGGATGGTAACAGC...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp ACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCACGACAAGTTGGAAGCCTaGAGTGCGGTGTTACCACGT +
Preference number: 5 (lower is better)
Translates to: TENKVCSCACSTSMPALHDKLEA*SAVLPR
Trigger: ACGTGGTAACACCGCACTCAAGGCTTCCAACTTGTC...GTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp CAAAGAAATGAAGCTGATAATTTGGTAGAGGGAGTAGAGGGCAGCAGCCACATTTCCCACCAGGTCCCATaGCGGGAGAGACGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: QRNEADNLVEGVEGSSHISHQVP*RERRWV
Trigger: GACCCAGCGTCTCTCCCGCAATGGGACCTGGTGGGA...AATGTGGCTGCTGCCCTCTACTCCCTCTACCAAATTATCAGCTTCATTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp GACAGTAACTGCCCAGATCCAGTAGCAAGGACTGTCACCCCAGTGGTAGGGGAGACTCTGGGGAGAACCTaGGGAAGAAGAGACTCAAAA +
Preference number: 5 (lower is better)
Translates to: DSNCPDPVARTVTPVVGETLGRT*GRRDSK
Trigger: TTTTGAGTCTCTTCTTCCCAAGGTTCTCCCCAGAGT...CTCCCCTACCACTGGGGTGACAGTCCTTGCTACTGGATCTGGGCAGTTACTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS CCA 90 bp CGTGCAGATTGGAGAAGACCAGAATTCAAAGCACCACCAAACTGGTaGCGTGTTTCCTGCTTTTCCTGCAGTATCGCCTGGCCTAACCTC +
Preference number: 5 (lower is better)
Translates to: RADWRRPEFKAPPNW*RVSCFSCSIAWPNL
Trigger: GAGGTTAGGCCAGGCGATACTGCAGGAAAAGCAGGAAACACGCCACCAGTTTGGTGGTGCTTTGAATTCTGGTCTTCTCCAATCTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS-3UTR CAA 90 bp ACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCACGCACTTTGGTTAGCTTaGCTGTTACCATCCCATTGC +
Preference number: 5 (lower is better)
Translates to: TENKVCSCACSTSMPALHALWLA*LLPSHC
Trigger: GCAATGGGATGGTAACAGCAAAGCTAACCAAAGTGC...GTGCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp AATGAATGTCTGGAGGCTGAGTGGCGGGAGATTGCAACAAACAAGCGGCCATTTGGAGCTGCCTGGTCCTaGAATCATCTCGGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: NECLEAEWREIATNKRPFGAAWS*NHLGFA
Trigger: TGCAAAACCGAGATGATTCAAGGACCAGGCAGCTCC...AAATGGCCGCTTGTTTGTTGCAATCTCCCGCCACTCAGCCTCCAGACATTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp CATTGGGTGGCCAGTCTCCCCACATGCAACCCAAAGGGGCACAGAGCACTTTGGAACTACACAGTAACTTaGCTTTCCAAAACCAGAAGC +
Preference number: 5 (lower is better)
Translates to: HWVASLPTCNPKGHRALWNYTVT*LSKTRS
Trigger: GCTTCTGGTTTTGGAAAGCAAAGTTACTGTGTAGTT...CCAAAGTGCTCTGTGCCCCTTTGGGTTGCATGTGGGGAGACTGGCCACCCAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS CCA 90 bp CCACCAAACTGGTGGCGTGTTTCCTGCTTTTCCTGCAGTATCGCCTaGCCTAACCTCAAGGCAGGACTCAAGAAACATCTGACAAAATTC +
Preference number: 5 (lower is better)
Translates to: PPNWWRVSCFSCSIA*PNLKAGLKKHLTKF
Trigger: GAATTTTGTCAGATGTTTCTTGAGTCCTGCCTTGAGGTTAGGCCAGGCGATACTGCAGGAAAAGCAGGAAACACGCCACCAGTTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS-3UTR CAA 90 bp AAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCGTAGATGCCATCCTATaGGTTGACAAGTTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KLKTRCAAVRVQPPCQLCVDAIL*VDKLEA
Trigger: GGCTTCCAACTTGTCAACCAATAGGATGGCATCTAC...GCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS TCA 90 bp AACTGTGGGAAGAGACAAACGGCTGTGAATTCAGAGACTCTGGCATaGTTCAGCAAGTTATGGCTCCCACAGCACAGCAGAATCACCTCA +
Preference number: 5 (lower is better)
Translates to: NCGKRQTAVNSETLA*FSKLWLPQHSRITS
Trigger: TGAGGTGATTCTGCTGTGCTGTGGGAGCCATAACTTGCTGAATCATGCCAGAGTCTCTGAATTCACAGCCGTTTGTCTCTTCCCACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471528.1
CDS-3UTR CAA 90 bp AAACTGAAAACAAGGTGTGCAGCTGTGCGTGTTCAACCTCCATGCCAGCTCTGCTTGTCACTCCTTTCCTaGCATTCACTCCACACGATT +
Preference number: 5 (lower is better)
Translates to: KLKTRCAAVRVQPPCQLCLSLLS*HSLHTI
Trigger: AATCGTGTGGAGTGAATGCAAGGAAAGGAGTGACAA...GCAGAGCTGGCATGGAGGTTGAACACGCACAGCTGCACACCTTGTTTTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS-3UTR CAA 90 bp TACAGCCATGGCAGAAAGCAAAAGGGGAGTGAGCACTCCACATGGCCAAAGCAGACTGAGTGCTTCTTATaGTTAGGGACCAAGAGTAAC +
Preference number: 5 (lower is better)
Translates to: YSHGRKQKGSEHSTWPKQTECFL*LGTKSN
Trigger: GTTACTCTTGGTCCCTAACAATAAGAAGCACTCAGT...CTGCTTTGGCCATGTGGAGTGCTCACTCCCCTTTTGCTTTCTGCCATGGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS CCA 90 bp ACCCAGTATGGTTTGCAAGCTTGCAAAAGTGAGGGTTGCCAACTGTaGGAAGAGACAAACGGCTGTGAATTCAGAGACTCTGGCATGATT +
Preference number: 5 (lower is better)
Translates to: TQYGLQACKSEGCQL*EETNGCEFRDSGMI
Trigger: AATCATGCCAGAGTCTCTGAATTCACAGCCGTTTGTCTCTTCCCACAGTTGGCAACCCTCACTTTTGCAAGCTTGCAAACCATACTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471528.1
CDS-3UTR CAA 90 bp TGTCCAGCACGCTGCAGGACAAGGGAAGGGAAGCCTTCACTACGTAGATGCCATGCCACCCCTAATGTTTaGATAAGGATATTTCATTCA +
Preference number: 5 (lower is better)
Translates to: CPARCRTREGKPSLRRCHATPNV*IRIFHS
Trigger: TGAATGAAATATCCTTATCAAAACATTAGGGGTGGC...ATGGCATCTACGTAGTGAAGGCTTCCCTTCCCTTGTCCTGCAGCGTGCTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369498.8
CDS TCA 90 bp GTGGGTCAGGAGTGGCACACGTTGGCTCTTTTAAAAACTCCTAGGTaGTTCCAATGTGGAGCCAAATTTGAATACCAATGCCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: VGQEWHTLALLKTPR*FQCGAKFEYQCHRA
Trigger: AGCTCTGTGGCATTGGTATTCAAATTTGGCTCCACATTGGAATCACCTAGGAGTTTTTAAAAGAGCCAACGTGTGCCACTCCTGACCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471528.1
CDS GCA 90 bp CCTGACAATGTGAACAGAGCAAAGCATTCAGGCAGTTATTACTGTTaGTTAACAGGAAGAAATCTAGCATCTGGCCCCACAGAGATTTCT +
Preference number: 5 (lower is better)
Translates to: PDNVNRAKHSGSYYC*LTGRNLASGPTEIS
Trigger: AGAAATCTCTGTGGGGCCAGATGCTAGATTTCTTCCTGTTAAGCAACAGTAATAACTGCCTGAATGCTTTGCTCTGTTCACATTGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS TCA 90 bp CTTAACAGGAAGAAATCTAGCATCTGGCCCCACAGAGATTTCTCATaGGCAAGTTCATATAAACGGATATTAAGAGAACCACATCCAAAG +
Preference number: 5 (lower is better)
Translates to: LNRKKSSIWPHRDFS*ASSYKRILREPHPK
Trigger: CTTTGGATGTGGTTCTCTTAATATCCGTTTATATGAACTTGCTCATGAGAAATCTCTGTGGGGCCAGATGCTAGATTTCTTCCTGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CCA 90 bp GAACTCAAAGACAACCTAAATAAATGGAGAGACACATCATGTACATaGAATGGAATACTCAACACAGAAATGATGCCCAGTTCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: ELKDNLNKWRDTSCT*NGILNTEMMPSSLQ
Trigger: TTGGAGAGAACTGGGCATCATTTCTGTGTTGAGTATTCCATTCCATGTACATGATGTGTCTCTCCATTTATTTAGGTTGTCTTTGAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CCA 90 bp ATAAATCCTGAAGTAGACTCTCGAAACCCTCTGACTTTCCATTTTTaGAGACATCTGCCATTTGATTCTTTGTATCATGATGACATCTAC +
Preference number: 5 (lower is better)
Translates to: INPEVDSRNPLTFHF*RHLPFDSLYHDDIY
Trigger: GTAGATGTCATCATGATACAAAGAATCAAATGGCAGATGTCTCCAAAAATGGAAAGTCAGAGGGTTTCGAGAGTCTACTTCAGGATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CCA 72 bp GGCTGGGTGAGCTCCACTGGAGACGACACCCCAGGGTaGTTAGGCCCCAGACACGCGCGTGACCTTGGCCGG +
Preference number: 6 (lower is better)
Translates to: GWVSSTGDDTPG*LGPRHARDLGR
Trigger: CCGGCCAAGGTCACGCGCGTGTCTGGGGCCTAACCACCCTGGGGTGTCGTCTCCAGTGGAGCTCACCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484175.5
CDS TCA 72 bp GAAGTCCCCTGGGTGGCCCAGGCCAGGATTGCGAGGTaGCTTCCTGCTCTCCTTGGCATTACTGGGGGACTG +
Preference number: 6 (lower is better)
Translates to: EVPWVAQARIAR*LPALLGITGGL
Trigger: CAGTCCCCCAGTAATGCCAAGGAGAGCAGGAAGTCACCTCGCAATCCTGGCCTGGGCCACCCAGGGGACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CAA 90 bp GTAGTAATGGTGGTGGTGAAGTCCCCTGGGTGGCCCAGGCCAGGATaGCGAGGTGACTTCCTGCTCTCCTTGGCATTACTGGGGGACTGC +
Preference number: 6 (lower is better)
Translates to: VVMVVVKSPGWPRPG*RGDFLLSLALLGDC
Trigger: GCAGTCCCCCAGTAATGCCAAGGAGAGCAGGAAGTCACCTCGCAATCCTGGCCTGGGCCACCCAGGGGACTTCACCACCACCATTACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS GCA 72 bp AGCAACACCAGAACTGGGAAAAGCAGCCTCTCCCGCTaGAAGGTCCCTCCAGCGCCCTCTACTGACAAAGCT +
Preference number: 6 (lower is better)
Translates to: SNTRTGKSSLSR*KVPPAPSTDKA
Trigger: AGCTTTGTCAGTAGAGGGCGCTGGAGGGACCTTGCAGCGGGAGAGGCTGCTTTTCCCAGTTCTGGTGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS GCA 72 bp GCACCACCAAACTGGTGGCGTGTTTCCTGCTTTTCCTaGAGTATCGCCTGGCCTAACCTCAAGGCAGGACTC +
Preference number: 6 (lower is better)
Translates to: APPNWWRVSCFS*SIAWPNLKAGL
Trigger: GAGTCCTGCCTTGAGGTTAGGCCAGGCGATACTGCAGGAAAAGCAGGAAACACGCCACCAGTTTGGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CCA 72 bp TGGTGGCGTGTTTCCTGCTTTTCCTGCAGTATCGCCTaGCCTAACCTCAAGGCAGGACTCAAGAAACATCTG +
Preference number: 6 (lower is better)
Translates to: WWRVSCFSCSIA*PNLKAGLKKHL
Trigger: CAGATGTTTCTTGAGTCCTGCCTTGAGGTTAGGCCAGGCGATACTGCAGGAAAAGCAGGAAACACGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS GCA 72 bp GAATTCAAAGCACCACCAAACTGGTGGCGTGTTTCCTaGTTTTCCTGCAGTATCGCCTGGCCTAACCTCAAG +
Preference number: 6 (lower is better)
Translates to: EFKAPPNWWRVS*FSCSIAWPNLK
Trigger: CTTGAGGTTAGGCCAGGCGATACTGCAGGAAAAGCAGGAAACACGCCACCAGTTTGGTGGTGCTTTGAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CCA 72 bp TGGAGAAGACCAGAATTCAAAGCACCACCAAACTGGTaGCGTGTTTCCTGCTTTTCCTGCAGTATCGCCTGG +
Preference number: 6 (lower is better)
Translates to: WRRPEFKAPPNW*RVSCFSCSIAW
Trigger: CCAGGCGATACTGCAGGAAAAGCAGGAAACACGCCACCAGTTTGGTGGTGCTTTGAATTCTGGTCTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS TCA 72 bp AAGAGACAAACGGCTGTGAATTCAGAGACTCTGGCATaGTTCAGCAAGTTATGGCTCCCACAGCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: KRQTAVNSETLA*FSKLWLPQHSR
Trigger: TCTGCTGTGCTGTGGGAGCCATAACTTGCTGAATCATGCCAGAGTCTCTGAATTCACAGCCGTTTGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471528.1
CDS GCA 72 bp ACCCAGTATGGTTTGCAAGCTTGCAAAAGTGAGGGTTaGCAACTGTGGGAAGAGACAAACGGCTGTGAATTC +
Preference number: 6 (lower is better)
Translates to: TQYGLQACKSEG*QLWEETNGCEF
Trigger: GAATTCACAGCCGTTTGTCTCTTCCCACAGTTGGCAACCCTCACTTTTGCAAGCTTGCAAACCATACTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471528.1
CDS CCA 72 bp GGTTTGCAAGCTTGCAAAAGTGAGGGTTGCCAACTGTaGGAAGAGACAAACGGCTGTGAATTCAGAGACTCT +
Preference number: 6 (lower is better)
Translates to: GLQACKSEGCQL*EETNGCEFRDS
Trigger: AGAGTCTCTGAATTCACAGCCGTTTGTCTCTTCCCACAGTTGGCAACCCTCACTTTTGCAAGCTTGCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471528.1
CDS GCA 72 bp GAAACTAAAAGTCTTCACCTTGCTAGAGTCTCCTCCTaGATTGTTGCTCTTCCTCTAGGCCCTATTTTAGCT +
Preference number: 6 (lower is better)
Translates to: ETKSLHLARVSS*IVALPLGPILA
Trigger: AGCTAAAATAGGGCCTAGAGGAAGAGCAACAATGCAGGAGGAGACTCTAGCAAGGTGAAGACTTTTAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS GCA 72 bp GTGAACAGAGCAAAGCATTCAGGCAGTTATTACTGTTaGTTAACAGGAAGAAATCTAGCATCTGGCCCCACA +
Preference number: 6 (lower is better)
Translates to: VNRAKHSGSYYC*LTGRNLASGPT
Trigger: TGTGGGGCCAGATGCTAGATTTCTTCCTGTTAAGCAACAGTAATAACTGCCTGAATGCTTTGCTCTGTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CAA 72 bp TGTGAACAGAGCAAAGCATTCAGGCAGTTATTACTGTaGCTTAACAGGAAGAAATCTAGCATCTGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: CEQSKAFRQLLL*LNRKKSSIWPH
Trigger: GTGGGGCCAGATGCTAGATTTCTTCCTGTTAAGCAACAGTAATAACTGCCTGAATGCTTTGCTCTGTTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CAA 72 bp TTTGAAGGCTCTTACATAAAAACAGCGACGTGCAGATaGGAGAAGACCAGAATTCAAAGCACCACCAAACTG +
Preference number: 6 (lower is better)
Translates to: FEGSYIKTATCR*EKTRIQSTTKL
Trigger: CAGTTTGGTGGTGCTTTGAATTCTGGTCTTCTCCAATCTGCACGTCGCTGTTTTTATGTAAGAGCCTTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS TCA 72 bp CCTGGCCTAACCTCAAGGCAGGACTCAAGAAACATCTaGCAAAATTCAACGCAAATTCATGATAAAACTCTC +
Preference number: 6 (lower is better)
Translates to: PGLTSRQDSRNI*QNSTQIHDKTL
Trigger: GAGAGTTTTATCATGAATTTGCGTTGAATTTTGTCAGATGTTTCTTGAGTCCTGCCTTGAGGTTAGGCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CAA 72 bp GCAATCTCAAAATATCTGAAACTAAAAGTCTTCACCTaGCTAGAGTCTCCTCCTGCATTGTTGCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: AISKYLKLKVFT*LESPPALLLFL
Trigger: GAGGAAGAGCAACAATGCAGGAGGAGACTCTAGCAAGGTGAAGACTTTTAGTTTCAGATATTTTGAGATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS TCA 72 bp AAGAAATCTAGCATCTGGCCCCACAGAGATTTCTCATaGGCAAGTTCATATAAACGGATATTAAGAGAACCA +
Preference number: 6 (lower is better)
Translates to: KKSSIWPHRDFS*ASSYKRILREP
Trigger: TGGTTCTCTTAATATCCGTTTATATGAACTTGCTCATGAGAAATCTCTGTGGGGCCAGATGCTAGATTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CCA 72 bp GACAACCTAAATAAATGGAGAGACACATCATGTACATaGAATGGAATACTCAACACAGAAATGATGCCCAGT +
Preference number: 6 (lower is better)
Translates to: DNLNKWRDTSCT*NGILNTEMMPS
Trigger: ACTGGGCATCATTTCTGTGTTGAGTATTCCATTCCATGTACATGATGTGTCTCTCCATTTATTTAGGTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CCA 72 bp GAAGTAGACTCTCGAAACCCTCTGACTTTCCATTTTTaGAGACATCTGCCATTTGATTCTTTGTATCATGAT +
Preference number: 6 (lower is better)
Translates to: EVDSRNPLTFHF*RHLPFDSLYHD
Trigger: ATCATGATACAAAGAATCAAATGGCAGATGTCTCCAAAAATGGAAAGTCAGAGGGTTTCGAGAGTCTACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS TCA 72 bp TCTGAAAAAGAACAGAGTTGGGGAAATCACACTACCTaGTTTAAGATTTACTATAATGCTACAGTAGTCAAG +
Preference number: 6 (lower is better)
Translates to: SEKEQSWGNHTT*FKIYYNATVVK
Trigger: CTTGACTACTGTAGCATTATAGTAAATCTTAAATCAGGTAGTGTGATTTCCCCAACTCTGTTCTTTTTCAGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492303.1
CDS CAA 72 bp ATTACTTACAGCAACCACATAGTTGAGTATCAACATTaGTATCTAAAAGAAGGCTCTGGTTCATTTACTCCA +
Preference number: 6 (lower is better)
Translates to: ITYSNHIVEYQH*YLKEGSGSFTP
Trigger: TGGAGTAAATGAACCAGAGCCTTCTTTTAGATACAAATGTTGATACTCAACTATGTGGTTGCTGTAAGTAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492303.1