Pregenerated sensors for FUCA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000001036Ensembl transcript IDs: ENST00000002165.11, ENST00000367585.1, ENST00000451668.1
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CCCAGAGCAACTTCCAGTCCTGTAAGCTCCATTCGTGGTAAGTGCCCTATACAGTTTGCTTTCTCCATGTaGTACAATTATAGACACCTG | + |
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Preference number: 2 (lower is better) Translates to: PRATSSPVSSIRGKCPIQFAFSM*YNYRHL Trigger: CAGGTGTCTATAATTGTAGCACATGGAGAAAGCAAA...CTGTATAGGGCACTTACCACGAATGGAGCTTACAGGACTGGAAGTTGCTCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| 3UTR-3UTR GCA 90 bp | GTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCAACTTCCAGTCCTGATCCAGTTTTACATTTaGTTTCTCCATGTGCTACAA | + |
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Preference number: 2 (lower is better) Translates to: VLGLHIHSLTHPEQLPVLIQFYI*FLHVLQ Trigger: TTGTAGCACATGGAGAAAGCAAATGTAAAACTGGAT...CAGGACTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| 3UTR-3UTR GCA 90 bp | CCCAGAGCAACTTCCAGTCCTGTAAGCTCCATTCGTGGTAAGTGCCCTATACAGTACCACTGTTACTATTaGCTACAGTATTCAGTAACA | + |
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Preference number: 2 (lower is better) Translates to: PRATSSPVSSIRGKCPIQYHCYY*LQYSVT Trigger: TGTTACTGAATACTGTAGGCAATAGTAACAGTGGTA...CTGTATAGGGCACTTACCACGAATGGAGCTTACAGGACTGGAAGTTGCTCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| 3UTR-3UTR CCA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCCTCTGAGTCACACATaGAAACAAATCAATGTGAAG | + |
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Preference number: 2 (lower is better) Translates to: AVFNNVLGLHIHSLTHPEPLSHT*KQINVK Trigger: CTTCACATTGATTTGTTTCCATGTGTGACTCAGAGG...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| 3UTR-3UTR GCA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCGCCTTAGACATAACTTaGAGCATCAGCCACTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSALDIT*SISHSA Trigger: AGCAGAGTGGCTGATGCTGCAAGTTATGTCTAAGGC...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| 3UTR-3UTR GCA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCGGGAAAGGGCTGAACTaGCAAAATAATTTTCTTATC | + |
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Preference number: 2 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCGKGLN*QNNFLI Trigger: GATAAGAAAATTATTTTGGCAGTTCAGCCCTTTCCC...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| 3UTR-3UTR CCA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCAATGGCAAAGTGCACTaGAGAGTTAAAATGGTTACA | + |
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Preference number: 2 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCNGKVH*RVKMVT Trigger: TGTAACCATTTTAACTCTCCAGTGCACTTTGCCATT...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| 3UTR-3UTR CAA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGATACCACTGTTACTATaGCCTACAGTATTCAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: AVFNNVLGLHIHSLTHPEIPLLL*PTVFSN Trigger: GTTACTGAATACTGTAGGCAATAGTAACAGTGGTAT...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGACGGGAACGCGAGCCTaGGGAGCTCCTGGGGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: AVFNNVLGLHIHSLTHPETGTRA*GAPGAA Trigger: TGCGGCCCCAGGAGCTCCCCAGGCTCGCGTTCCCGT...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | GTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCAACTTCCAGTCCTGCCAGTATTGATCCGGTaGTCCTCCGTCACCATCCGA | + |
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Preference number: 4 (lower is better) Translates to: VLGLHIHSLTHPEQLPVLPVLIR*SSVTIR Trigger: TCGGATGGTGACGGAGGAGCACCGGATCAATACTGG...CAGGACTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGGCCGGCTGTCCTCTCTaGAGGCTCCCGCGGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQAGCPL*RLPRPR Trigger: CCGAGGCCGCGGGAGCCTGCAGAGAGGACAGCCGGC...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGCCAGGGACTCCCAGGTaGGGTCGAAGCGCGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQPGTPR*GRSAWR Trigger: GCGCCACGCGCTTCGACCCCACCTGGGAGTCCCTGG...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCAACCACGCGGGCAGCTaGCGGGCGTCCAGGGACTCC | + |
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Preference number: 4 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCNHAGS*RASRDS Trigger: GGAGTCCCTGGACGCCCGCCAGCTGCCCGCGTGGTT...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCTACCTCAAGTTCCTTaGCAATGTCCCTCTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: AVFNNVLGLHIHSLTHPELPQVP*QCPSWA Trigger: GGCCCAAGAGGGACATTGTCAAGGAACTTGAGGTAG...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | ATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGTGGGGTCGAAGCGCGTaGCGCTGTGGGCAGGGCACG | + |
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Preference number: 4 (lower is better) Translates to: IWLQHKIFSSVHNTTNSLWGRSA*RCGQGT Trigger: CGTGCCCTGCCCACAGCGCCACGCGCTTCGACCCCA...CAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | GTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCAACTTCCAGTCCTGGGCCTGAAAAATATCTaGCCACTGGTTGGCATTAAA | + |
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Preference number: 4 (lower is better) Translates to: VLGLHIHSLTHPEQLPVLGLKNI*PLVGIK Trigger: TTTAATGCCAACCAGTGGGCAGATATTTTTCAGGCC...CAGGACTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | GTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCAACTTCCAGTCCTGCCTCTGAGTCACACATaGAAACAAATCAATGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VLGLHIHSLTHPEQLPVLPLSHT*KQINVK Trigger: CTTCACATTGATTTGTTTCCATGTGTGACTCAGAGG...CAGGACTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | GTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCAACTTCCAGTCCTGTTAGAAACTGGAAATTaGCGCTTATGGAATGAACTG | + |
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Preference number: 4 (lower is better) Translates to: VLGLHIHSLTHPEQLPVLLETGN*RLWNEL Trigger: CAGTTCATTCCATAAGCGGCAATTTCCAGTTTCTAA...CAGGACTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | CCCAGAGCAACTTCCAGTCCTGTAAGCTCCATTCGTGGTAAGTGCCCTATACAGGTTTTCCCATTTATGTaGCAAAAGATGTCCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: PRATSSPVSSIRGKCPIQVFPFM*QKMSWV Trigger: AACCCAGGACATCTTTTGCCACATAAATGGGAAAAC...CTGTATAGGGCACTTACCACGAATGGAGCTTACAGGACTGGAAGTTGCTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCCCCAACGATCATTGGTaGCTACTGTGCCCCGAACTG | + |
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Preference number: 4 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSPNDHW*LLCPEL Trigger: CAGTTCGGGGCACAGTAGTCACCAATGATCGTTGGG...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | CCCAGAGCAACTTCCAGTCCTGTAAGCTCCATTCGTGGTAAGTGCCCTATACAGGGGAAAGGGCTGAACTaGCAAAATAATTTTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PRATSSPVSSIRGKCPIQGKGLN*QNNFLI Trigger: GATAAGAAAATTATTTTGGCAGTTCAGCCCTTTCCC...CTGTATAGGGCACTTACCACGAATGGAGCTTACAGGACTGGAAGTTGCTCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | CCCAGAGCAACTTCCAGTCCTGTAAGCTCCATTCGTGGTAAGTGCCCTATACAGCAATGTCTTAGAAACTaGAAATTGCCGCTTATGGAA | + |
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Preference number: 4 (lower is better) Translates to: PRATSSPVSSIRGKCPIQQCLRN*KLPLME Trigger: TTCCATAAGCGGCAATTTCCAGTTTCTAAGACATTG...CTGTATAGGGCACTTACCACGAATGGAGCTTACAGGACTGGAAGTTGCTCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGAGCCAGGACCCCATTTaGCTCAGTCGCTCCTCAAAA | + |
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Preference number: 4 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQSQDPI*LSRSSK Trigger: TTTTGAGGAGCGACTGAGGCAAATGGGGTCCTGGCT...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTAACTCGCTACCGAAGCTaGGCACGGAAAACACTCCCC | + |
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Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLTRYRS*ARKTLP Trigger: GGGGAGTGTTTTCCGTGCCCAGCTTCGGTAGCGAGT...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | ATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGGTGCTGTTCCAGTATTaGTCCGGTGCTCCTCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: IWLQHKIFSSVHNTTNSLVLFQY*SGAPPS Trigger: TGACGGAGGAGCACCGGATCAATACTGGAACAGCAC...CAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCAGGCCAAGAAGCCTGTaGTGTTCCAGTATTGATCCG | + |
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Preference number: 4 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSRPRSL*CSSIDP Trigger: CGGATCAATACTGGAACAGCACAGGCTTCTTGGCCT...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGGTGTGTAGTAGGCTATaGCATCTAGGATTTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: AVFNNVLGLHIHSLTHPEVCSRL*HLGFCK Trigger: TTTACAAAATCCTAGATGGCATAGCCTACTACACAC...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGTGGGCCCCTCATCTATaGCATTCCAGTTCCACGAAT | + |
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Preference number: 4 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQWAPHL*HSSSTN Trigger: ATTCGTGGAACTGGAATGCCATAGATGAGGGGCCCA...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCGTGACAGTGTCATTCTaGGATCGCCAGGTATGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSVTVSF*DRQVWV Trigger: AACCCATACCTGGCGATCCCAGAATGACACTGTCAC...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTAACCACACATCTGGGGTaGCAGTGTCATTCTGGGATC | + |
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Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLTTHLG*QCHSGI Trigger: GATCCCAGAATGACACTGTCACCCCAGATGTGTGGT...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTCACATTCACTCACTaGCTCACCCAGAGCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSFTFTH*LTQSNF Trigger: GAAGTTGCTCTGGGTGAGTCAGTGAGTGAATGTGAA...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGACTGTCTCTACAAGTTaGTTCACCAATTCTTCAATT | + |
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Preference number: 4 (lower is better) Translates to: AVFNNVLGLHIHSLTHPETVSTS*FTNSSI Trigger: AATTGAAGAATTGGTGAAGCAACTTGTAGAGACAGT...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTGTGTACCACACATCTaGGGTGACAGTGTCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSCVPHI*GDSVIL Trigger: CAGAATGACACTGTCACCCCAGATGTGTGGTACACA...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | ATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGGTTCCACGAATATTCTaGCCCCCACAAGGTAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: IWLQHKIFSSVHNTTNSLVPRIF*PPQGKA Trigger: GGCTTTACCTTGTGGGGGTCAGAATATTCGTGGAAC...CAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | ATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCACCATGCTTACAGATaGTACCAGCTCCCCAACGAT | + |
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Preference number: 4 (lower is better) Translates to: IWLQHKIFSSVHNTTNSLHHAYR*YQLPND Trigger: ATCGTTGGGGAGCTGGTAGCATCTGTAAGCATGGTG...CAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCGAAAACACTCCCCAGTaGATGAAGATGCCGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCENTPQ*MKMPNL Trigger: CAAGTTCGGCATCTTCATCCACTGGGGAGTGTTTTC...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGACGGCATCTGATGAATaGTTAGCTGTGGCAGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQTASDE*LAVAVL Trigger: TAGAACTGCCACAGCTAACCATTCATCAGATGCCGT...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGTGGCAAAAGATGTCCTaGGTTATAACGATCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQWQKMS*VITITA Trigger: TGCAGTGATCGTTATAACCCAGGACATCTTTTGCCA...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR CCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTATTAAGTGGCTGTCCATaGCCCAGTAGTTTCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLLSGCP*PSSFTS Trigger: AGAGGTGAAACTACTGGGCCATGGACAGCCACTTAA...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | ATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGTTGCCGCTTATGGAATaGACTGGATTCATCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: IWLQHKIFSSVHNTTNSLLPLME*TGFILK Trigger: CTTGAGGATGAATCCAGTTCATTCCATAAGCGGCAA...CAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTAAAGGAACAGCTGTCCTaGTGTGGGCCATTTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLKEQLS*CGPFKK Trigger: TTTCTTAAATGGCCCACATCAGGACAGCTGTTCCTT...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTAAAACTACAGAAATGGTaGCATCTAGTGTGGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLKLQKW*HLVWAQ Trigger: TTGGGCCCACACTAGATGGCACCATTTCTGTAGTTT...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | TCGATATACAAATACCACTGTTACTATTGCCTACAGTATTCAGTAACATGCTGTCAGCATCAGCCACTCTaGTGCACTTTAGATCACATT | + |
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Preference number: 4 (lower is better) Translates to: SIYKYHCYYCLQYSVTCCQHQPL*CTLDHI Trigger: AATGTGATCTAAAGTGCAGCAGAGTGGCTGATGCTG...ACAGCATGTTACTGAATACTGTAGGCAATAGTAACAGTGGTATTTGTATATCGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR TCA 90 bp | TCGATATACAAATACCACTGTTACTATTGCCTACAGTATTCAGTAACATGCTGTTCAAGGAAGAGCGGATaGAACCATTCAAAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SIYKYHCYYCLQYSVTCCSRKSG*NHSKRE Trigger: TTCCCTTTTTGAATGGTTTCATCCGCTCTTCCTTGA...ACAGCATGTTACTGAATACTGTAGGCAATAGTAACAGTGGTATTTGTATATCGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTACATCAGCCACTCTGCTaGACTTTAGATCACATTAGT | + |
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Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLHQPLC*TLDHIS Trigger: ACTAATGTGATCTAAAGTGCAGCAGAGTGGCTGATG...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS-3UTR GCA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCAGTGCCCTATACAGGTaGACCATTTATTTTACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSSALYR*TIYFTV Trigger: TACTGTAAAATAAATGGTGCACCTGTATAGGGCACT...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CCA 90 bp | ATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGGGAAATTGCCGCTTATaGAATGAACTGGATTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IWLQHKIFSSVHNTTNSLGNCRL*NELDSS Trigger: GGATGAATCCAGTTCATTCCATAAGCGGCAATTTCC...CAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTATGGTGCCATCTAGTGTaGGCCCAATATTCATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLWCHLV*AQYSSK Trigger: TTTTGATGAATATTGGGCCCACACTAGATGGCACCA...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CCA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGAATGGCAAAGTGCACTaGAGAGTTAAAATGGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQNGKVH*RVKMVT Trigger: TGTAACCATTTTAACTCTCCAGTGCACTTTGCCATT...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR TCA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCAAGGTAAAGCCTTCATaGTGTTTGGAAGTTAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCKVKPS*CLEVKT Trigger: TGTCTTAACTTCCAAACATCATGAAGGCTTTACCTT...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR TCA 90 bp | TCGATATACAAATACCACTGTTACTATTGCCTACAGTATTCAGTAACATGCTGTAAGATTTCCTCCACATaGAACTGTCTCTACAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIYKYHCYYCLQYSVTCCKISST*NCLYKL Trigger: CAACTTGTAGAGACAGTTTCATGTGGAGGAAATCTT...ACAGCATGTTACTGAATACTGTAGGCAATAGTAACAGTGGTATTTGTATATCGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR TCA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCAAAAATTCTCACCTCTaGGTCACACATGGAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCKNSHL*VTHGNK Trigger: TTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTTT...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CCA 90 bp | TCGATATACAAATACCACTGTTACTATTGCCTACAGTATTCAGTAACATGCTGTGCTTATGGAATGAACTaGATTCATCCTCAAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SIYKYHCYYCLQYSVTCCAYGMN*IHPQGR Trigger: TCTTCCTTGAGGATGAATCCAGTTCATTCCATAAGC...ACAGCATGTTACTGAATACTGTAGGCAATAGTAACAGTGGTATTTGTATATCGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR GCA 90 bp | TCGATATACAAATACCACTGTTACTATTGCCTACAGTATTCAGTAACATGCTGTTTTGCTTTCTCCATGTaGTACAATTATAGACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIYKYHCYYCLQYSVTCCFAFSM*YNYRHL Trigger: CAGGTGTCTATAATTGTAGCACATGGAGAAAGCAAA...ACAGCATGTTACTGAATACTGTAGGCAATAGTAACAGTGGTATTTGTATATCGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR GCA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCATCCAGTTTTACATTTaGTTTCTCCATGTGCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCIQFYI*FLHVLQ Trigger: TTGTAGCACATGGAGAAAGCAAATGTAAAACTGGAT...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CCA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTATTAAGACAATGTATTTaGCACCAGAGGCCTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KILTSESHMETNQCEETLLRQCI*HQRPEK Trigger: TTTTTCAGGCCTCTGGTGCCAAATACATTGTCTTAA...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR GCA 90 bp | ATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGACCATAATGCCATTTTaGTCCAAAGAAATCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: IWLQHKIFSSVHNTTNSLTIMPF*SKEIQL Trigger: TAACTGGATTTCTTTGGAGCAAAATGGCATTATGGT...CAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CCA 90 bp | GGTCAAACCACGCGGGCAGCTGGCGGGCGTCCAGGGACTCCCAGGTaGGGTCGAAGCGCGTGGCGCTGTGGGCAGGGCACGGCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GQTTRAAGGRPGTPR*GRSAWRCGQGTAAA Trigger: CGCCGCCGCCGTGCCCTGCCCACAGCGCCACGCGCTTCGACCCCACCTGGGAGTCCCTGGACGCCCGCCAGCTGCCCGCGTGGTTTGACC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000002165.11 ENST00000367585.1 |
||
| CDS CCA 90 bp | GCGGCAGCAGCAGCAACAGCAACAGCAGCAACGGGAACGCGAGCCTaGGGAGCTCCTGGGGCCGCATGTCCCGGCGCAGGCCGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAATATAATGTRA*GAPGAACPGAGRLS Trigger: GGACAGCCGGCCTGCGCCGGGACATGCGGCCCCAGGAGCTCCCCAGGCTCGCGTTCCCGTTGCTGCTGTTGCTGTTGCTGCTGCTGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000002165.11 ENST00000367585.1 |
||
| CDS-3UTR CAA 90 bp | GTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGCAACTTCCAGTCCTGGCTACCTCAAGTTCCTaGACAATGTCCCTCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLGLHIHSLTHPEQLPVLATSSS*TMSLLG Trigger: GCCCAAGAGGGACATTGTCAAGGAACTTGAGGTAGC...CAGGACTGGAAGTTGCTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS TCA 90 bp | CTTTCATTATATAACCAGGCCAAGAAGCCTGTGCTGTTCCAGTATTaGTCCGGTGCTCCTCCGTCACCATCCGACCACAGAACCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLYNQAKKPVLFQY*SGAPPSPSDHRTSG Trigger: GCCTGAGGTTCTGTGGTCGGATGGTGACGGAGGAGCACCGGATCAATACTGGAACAGCACAGGCTTCTTGGCCTGGTTATATAATGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGGCTCCCCAACGATCATaGGTGACTACTGTGCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: AVFNNVLGLHIHSLTHPEAPQRS*VTTVPR Trigger: TCGGGGCACAGTAGTCACCAATGATCGTTGGGGAGC...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS TCA 90 bp | AGCCACCATGCTTACAGATGCTACCAGCTCCCCAACGATCATTGGTaGCTACTGTGCCCCGAACTGGGCTTTCATTATATAACCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHHAYRCYQLPNDHW*LLCPELGFHYITRP Trigger: TGGCCTGGTTATATAATGAAAGCCCAGTTCGGGGCACAGTAGTCACCAATGATCGTTGGGGAGCTGGTAGCATCTGTAAGCATGGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTTCAATAATGTCCTAGGCCTTCACATTCACTCACTGACTCACCCAGAGTGTGCTGTTCCAGTATaGATCCGGTGCTCCTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVFNNVLGLHIHSLTHPECAVPV*IRCSSV Trigger: GACGGAGGAGCACCGGATCAATACTGGAACAGCACA...CTCTGGGTGAGTCAGTGAGTGAATGTGAAGGCCTAGGACATTATTGAACACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGCAACTTCCAGTCCTGTAAGCTCCATTCGTGGTAAGTGCCCTATACAGAGCCTTAGACATAACTaGCAGCATCAGCCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRATSSPVSSIRGKCPIQSLRHN*QHQPLC Trigger: GCAGAGTGGCTGATGCTGCAAGTTATGTCTAAGGCT...CTGTATAGGGCACTTACCACGAATGGAGCTTACAGGACTGGAAGTTGCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS GCA 90 bp | TTTCCCATTTATGTGGCAAAAGATGTCCTGGGTTATAACGATCACTaGAGGTATAGAAGCCACCATGCTTACAGATGCTACCAGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPIYVAKDVLGYNDH*RYRSHHAYRCYQLP Trigger: GGGGAGCTGGTAGCATCTGTAAGCATGGTGGCTTCTATACCTGCAGTGATCGTTATAACCCAGGACATCTTTTGCCACATAAATGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | GGGATATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCATGAAGATGCCGAACTaGGCCTGGTCAAACCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: GIWLQHKIFSSVHNTTNSMKMPN*AWSNHA Trigger: CGCGTGGTTTGACCAGGCCAAGTTCGGCATCTTCAT...GGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CCA 90 bp | GCCTCAGTCGCTCCTCAAAAACTACAGAAATGGTGCCATCTAGTGTaGGCCCAATATTCATCAAAAGATTTCCTCCACATGAAACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASVAPQKLQKWCHLV*AQYSSKDFLHMKLS Trigger: AGACAGTTTCATGTGGAGGAAATCTTTTGATGAATATTGGGCCCACACTAGATGGCACCATTTCTGTAGTTTTTGAGGAGCGACTGAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000002165.11 ENST00000367585.1 ENST00000451668.1 |
||
| CDS TCA 90 bp | GAGCTCTGGCAATGTCTTAGAAACTGGAAATTGCCGCTTATGGAATaGACTGGATTCATCCTCAAGGAAGAGCGGATGAAACCATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ELWQCLRNWKLPLME*TGFILKEERMKPFK Trigger: TTTGAATGGTTTCATCCGCTCTTCCTTGAGGATGAATCCAGTTCATTCCATAAGCGGCAATTTCCAGTTTCTAAGACATTGCCAGAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | TATGGCTTCAACATAAAATTTTCAGTTCGGTCCATAATACCACCAATTCCTTGCTTGACAATGTCCCTCTaGGGCCCCTCATCTATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: YGFNIKFSVRSIIPPIPCLTMSL*GPSSMA Trigger: TGCCATAGATGAGGGGCCCAAGAGGGACATTGTCAA...GCAAGGAATTGGTGGTATTATGGACCGAACTGAAAATTTTATGTTGAAGCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CCA 90 bp | GTCTATTGTCATGCAGTTTTCCCATTTATGTGGCAAAAGATGTCCTaGGTTATAACGATCACTGCAGGTATAGAAGCCACCATGCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: VYCHAVFPFMWQKMS*VITITAGIEATMLT Trigger: TGTAAGCATGGTGGCTTCTATACCTGCAGTGATCGTTATAACCCAGGACATCTTTTGCCACATAAATGGGAAAACTGCATGACAATAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | TCGATATACAAATACCACTGTTACTATTGCCTACAGTATTCAGTAACATGCTGTCGGTATCTTTTCCTTTaGCCAATACCACCAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SIYKYHCYYCLQYSVTCCRYLFL*PIPPEP Trigger: TGGTTCTGGTGGTATTGGCAAAAGGAAAAGATACCG...ACAGCATGTTACTGAATACTGTAGGCAATAGTAACAGTGGTATTTGTATATCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGAACTGTCTCTACAAGTaGCTTCACCAATTCTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQNCLYK*LHQFFN Trigger: ATTGAAGAATTGGTGAAGCAACTTGTAGAGACAGTT...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | ATGTGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTTGCAGAATTTTTCTTTAGGCTaGGATGTGTACCACACATCT | + |
|
Preference number: 5 (lower is better) Translates to: MCYNYRHLIVPSLRHNLQNFSLG*DVYHTS Trigger: AGATGTGTGGTACACATCCAAGCCTAAAGAAAAATT...CTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTATACCATAATGCCATTTaGCTCCAAAGAAATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KILTSESHMETNQCEETLYHNAI*LQRNPV Trigger: AACTGGATTTCTTTGGAGCAAAATGGCATTATGGTA...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS-3UTR CAA 90 bp | AAAATTCTCACCTCTGAGTCACACATGGAAACAAATCAATGTGAAGAGACTTTAATACCACTGTTACTATaGCCTACAGTATTCAGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: KILTSESHMETNQCEETLIPLLL*PTVFSN Trigger: GTTACTGAATACTGTAGGCAATAGTAACAGTGGTAT...TAAAGTCTCTTCACATTGATTTGTTTCCATGTGTGACTCAGAGGTGAGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS GCA 72 bp | GGGCCGCATGTCCCGGCGCAGGCCGGCTGTCCTCTCTaGAGGCTCCCGCGGCCTCGGGAGCGCTGTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GPHVPAQAGCPL*RLPRPRERCSS Trigger: GGAAGAACAGCGCTCCCGAGGCCGCGGGAGCCTGCAGAGAGGACAGCCGGCCTGCGCCGGGACATGCGGCCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CCA 72 bp | AACAGCAGCAACGGGAACGCGAGCCTGGGGAGCTCCTaGGGCCGCATGTCCCGGCGCAGGCCGGCTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NSSNGNASLGSS*GRMSRRRPAVL Trigger: GAGGACAGCCGGCCTGCGCCGGGACATGCGGCCCCAGGAGCTCCCCAGGCTCGCGTTCCCGTTGCTGCTGTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000002165.11 ENST00000367585.1 |
||
| CDS CCA 72 bp | GCAGCAACAGCAACAGCAGCAACGGGAACGCGAGCCTaGGGAGCTCCTGGGGCCGCATGTCCCGGCGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: AATATAATGTRA*GAPGAACPGAG Trigger: GCCTGCGCCGGGACATGCGGCCCCAGGAGCTCCCCAGGCTCGCGTTCCCGTTGCTGCTGTTGCTGTTGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000002165.11 ENST00000367585.1 |
||
| CDS GCA 72 bp | GGCCAAGAAGCCTGTGCTGTTCCAGTATTGATCCGGTaGTCCTCCGTCACCATCCGACCACAGAACCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GQEACAVPVLIR*SSVTIRPQNLR Trigger: CCTGAGGTTCTGTGGTCGGATGGTGACGGAGGAGCACCGGATCAATACTGGAACAGCACAGGCTTCTTGGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CAA 72 bp | CCCAGTAGTTTCACCTCTGTTGCCCCCAGAATAGCTTaGGGATGGCCAAGGAACAGCTGTCCTGATGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSFTSVAPRIA*GWPRNSCPDVG Trigger: GCCCACATCAGGACAGCTGTTCCTTGGCCATCCCAAAGCTATTCTGGGGGCAACAGAGGTGAAACTACTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS TCA 72 bp | TATAACCAGGCCAAGAAGCCTGTGCTGTTCCAGTATTaGTCCGGTGCTCCTCCGTCACCATCCGACCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: YNQAKKPVLFQY*SGAPPSPSDHR Trigger: TCTGTGGTCGGATGGTGACGGAGGAGCACCGGATCAATACTGGAACAGCACAGGCTTCTTGGCCTGGTTATA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CAA 72 bp | AAATTCCCTCTTACCTCTGTTGCCCCCAGAATAGCTTaGGGATGGCCAAGGAACAGCTGTCCTGATGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KFPLTSVAPRIA*GWPRNSCPDVG Trigger: GCCCACATCAGGACAGCTGTTCCTTGGCCATCCCAAAGCTATTCTGGGGGCAACAGAGGTAAGAGGGAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000451668.1 |
||
| CDS CAA 72 bp | CCATGCTTACAGATGCTACCAGCTCCCCAACGATCATaGGTGACTACTGTGCCCCGAACTGGGCTTTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: PCLQMLPAPQRS*VTTVPRTGLSL Trigger: TAATGAAAGCCCAGTTCGGGGCACAGTAGTCACCAATGATCGTTGGGGAGCTGGTAGCATCTGTAAGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CAA 90 bp | CCAAAACGCAGGTCAGTTCTGTTCCTAATGGCTACCTCAAGTTCCTaGACAATGTCCCTCTTGGGCCCCTCATCTATGGCATTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PKRRSVLFLMATSSS*TMSLLGPSSMAFQF Trigger: GAACTGGAATGCCATAGATGAGGGGCCCAAGAGGGACATTGTCAAGGAACTTGAGGTAGCCATTAGGAACAGAACTGACCTGCGTTTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CAA 72 bp | AGGTCAGTTCTGTTCCTAATGGCTACCTCAAGTTCCTaGACAATGTCCCTCTTGGGCCCCTCATCTATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSVLFLMATSSS*TMSLLGPSSMA Trigger: TGCCATAGATGAGGGGCCCAAGAGGGACATTGTCAAGGAACTTGAGGTAGCCATTAGGAACAGAACTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS TCA 72 bp | GCTTACAGATGCTACCAGCTCCCCAACGATCATTGGTaGCTACTGTGCCCCGAACTGGGCTTTCATTATATA | + |
|
Preference number: 6 (lower is better) Translates to: AYRCYQLPNDHW*LLCPELGFHYI Trigger: TATATAATGAAAGCCCAGTTCGGGGCACAGTAGTCACCAATGATCGTTGGGGAGCTGGTAGCATCTGTAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CAA 90 bp | AATAAGGTAAAATTCCCTCTTACCTCTGTTGCCCCCAGAATAGCTTaGGGATGGCCAAGGAACAGCTGTCCTGATGTGGGCCATTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NKVKFPLTSVAPRIA*GWPRNSCPDVGHLR Trigger: TCTTAAATGGCCCACATCAGGACAGCTGTTCCTTGGCCATCCCAAAGCTATTCTGGGGGCAACAGAGGTAAGAGGGAATTTTACCTTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000451668.1 |
||
| CDS TCA 72 bp | CCCCTCATCTATGGCATTCCAGTTCCACGAATATTCTaGCCCCCACAAGGTAAAGCCTTCATGATGTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PLIYGIPVPRIF*PPQGKAFMMFG Trigger: TCCAAACATCATGAAGGCTTTACCTTGTGGGGGTCAGAATATTCGTGGAACTGGAATGCCATAGATGAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CCA 72 bp | TTTTGCTCCAAAGAAATCCAGTTAAGTGGCTGTCCATaGCCCAGTAGTTTCACCTCTGTTGCCCCCAGAATA | + |
|
Preference number: 6 (lower is better) Translates to: FCSKEIQLSGCP*PSSFTSVAPRI Trigger: TATTCTGGGGGCAACAGAGGTGAAACTACTGGGCCATGGACAGCCACTTAACTGGATTTCTTTGGAGCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS GCA 72 bp | TATGTGGCAAAAGATGTCCTGGGTTATAACGATCACTaGAGGTATAGAAGCCACCATGCTTACAGATGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: YVAKDVLGYNDH*RYRSHHAYRCY Trigger: GTAGCATCTGTAAGCATGGTGGCTTCTATACCTGCAGTGATCGTTATAACCCAGGACATCTTTTGCCACATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CCA 72 bp | TCTGGCAATGTCTTAGAAACTGGAAATTGCCGCTTATaGAATGAACTGGATTCATCCTCAAGGAAGAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGNVLETGNCRL*NELDSSSRKSG Trigger: TCCGCTCTTCCTTGAGGATGAATCCAGTTCATTCCATAAGCGGCAATTTCCAGTTTCTAAGACATTGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CCA 72 bp | CATGCAGTTTTCCCATTTATGTGGCAAAAGATGTCCTaGGTTATAACGATCACTGCAGGTATAGAAGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HAVFPFMWQKMS*VITITAGIEAT Trigger: GGTGGCTTCTATACCTGCAGTGATCGTTATAACCCAGGACATCTTTTGCCACATAAATGGGAAAACTGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000002165.11 |
||
| CDS CAA 72 bp | TATAGACACCTGATAGTTCCTAGCCTTAGACATAACTaGCAGCATCAGCCACTCTGCTGCACTTTAGATCAC | + |
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Preference number: 6 (lower is better) Translates to: YRHLIVPSLRHN*QHQPLCCTLDH Trigger: GTGATCTAAAGTGCAGCAGAGTGGCTGATGCTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS GCA 72 bp | TTTGCCTCAGTCGCTCCTCAAAAACTACAGAAATGGTaGCATCTAGTGTGGGCCCAATATTCATCAAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: FASVAPQKLQKW*HLVWAQYSSKD Trigger: ATCTTTTGATGAATATTGGGCCCACACTAGATGGCACCATTTCTGTAGTTTTTGAGGAGCGACTGAGGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000002165.11 ENST00000367585.1 ENST00000451668.1 |
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| CDS CCA 72 bp | AGCCTTCATGATGTTTGGAAGTTAAGACAATGTATTTaGCACCAGAGGCCTGAAAAATATCTGCCCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: SLHDVWKLRQCI*HQRPEKYLPTG Trigger: ACCAGTGGGCAGATATTTTTCAGGCCTCTGGTGCCAAATACATTGTCTTAACTTCCAAACATCATGAAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS CCA 72 bp | GCTCCTCAAAAACTACAGAAATGGTGCCATCTAGTGTaGGCCCAATATTCATCAAAAGATTTCCTCCACATG | + |
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Preference number: 6 (lower is better) Translates to: APQKLQKWCHLV*AQYSSKDFLHM Trigger: CATGTGGAGGAAATCTTTTGATGAATATTGGGCCCACACTAGATGGCACCATTTCTGTAGTTTTTGAGGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000002165.11 ENST00000367585.1 ENST00000451668.1 |
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| CDS CAA 90 bp | TGCTACAATTATAGACACCTGATAGTTCCTAGCCTTAGACATAACTaGCAGCATCAGCCACTCTGCTGCACTTTAGATCACATTAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: CYNYRHLIVPSLRHN*QHQPLCCTLDHISQ Trigger: CTGACTAATGTGATCTAAAGTGCAGCAGAGTGGCTGATGCTGCAAGTTATGTCTAAGGCTAGGAACTATCAGGTGTCTATAATTGTAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS TCA 72 bp | CAATGTCTTAGAAACTGGAAATTGCCGCTTATGGAATaGACTGGATTCATCCTCAAGGAAGAGCGGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: QCLRNWKLPLME*TGFILKEERMK Trigger: TTTCATCCGCTCTTCCTTGAGGATGAATCCAGTTCATTCCATAAGCGGCAATTTCCAGTTTCTAAGACATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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| CDS CCA 72 bp | TTGCTTCATGATGTTTGGAAGTTAAGACAATGTATTTaGCACCAGAGGCCTGAAAAATATCTGCCCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLHDVWKLRQCI*HQRPEKYLPTG Trigger: ACCAGTGGGCAGATATTTTTCAGGCCTCTGGTGCCAAATACATTGTCTTAACTTCCAAACATCATGAAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367585.1 |
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| CDS TCA 72 bp | TGTGGGCCCAATATTCATCAAAAGATTTCCTCCACATaGAACTGTCTCTACAAGTTGCTTCACCAATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CGPNIHQKISST*NCLYKLLHQFF Trigger: GAAGAATTGGTGAAGCAACTTGTAGAGACAGTTTCATGTGGAGGAAATCTTTTGATGAATATTGGGCCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000002165.11 |
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