Pregenerated sensors for FUCA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000179163Ensembl transcript IDs: ENST00000374479.4
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCGAAGCAGGAAAACAGTaGGCAGCGCCTCTTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VDHSSLVSLFLSPKALLPEAGKQ*AAPLSS Trigger: AGAAGAAAGAGGCGCTGCTCACTGTTTTCCTGCTTC...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| 3UTR-3UTR TCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCCTTCTTCTGCTGACCTaGTACAGATATAATCACAAT | + |
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Preference number: 2 (lower is better) Translates to: VDHSSLVSLFLSPKALLPLLLLT*YRYNHN Trigger: ATTGTGATTATATCTGTATCAGGTCAGCAGAAGAAG...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| 3UTR-3UTR CAA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCAGCATGTGGTTGAGCTaGCCAAATCCTTCCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: VDHSSLVSLFLSPKALLPSMWLS*PNPSTS Trigger: GGAGGTGGAAGGATTTGGCAAGCTCAACCACATGCT...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| 3UTR GCA 72 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTaGTCAGTTCCTTCTTCTGCTGACCTGATACAGATA | + |
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Preference number: 3 (lower is better) Translates to: FQILQLMNSEFN*SVPSSADLIQI Trigger: TATCTGTATCAGGTCAGCAGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCGGCCGCCCCTCGCCCTaGCAGTGCCACCAGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPGRPSP*QCHQNH Trigger: GTGGTTCTGGTGGCACTGGCAGGGCGAGGGGCGGCC...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCCAGGCTCGGCCAGTCTaGGGTGTAGCGGCGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPQARPV*GVAARR Trigger: CCTCCGCGCCGCTACACCCCAGACTGGCCGAGCCTG...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCCCCTCGCCCTGCCAGTaGCACCAGAACCACTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPPSPCQ*HQNHSL Trigger: CAGCGAGTGGTTCTGGTGGCACTGGCAGGGCGAGGG...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACTCGCGCATGAAGCGCTaGTACTGCGGCCGCCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDSRMKR*YCGRPS Trigger: CGAGGGGCGGCCGCAGTACCAGCGCTTCATGCGCGA...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACGGTAGTTGTCGCGCATaGAGCGCTGGTACTGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDGSCRA*SAGTAA Trigger: GGCCGCAGTACCAGCGCTTCATGCGCGACAACTACC...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCCCAACCAAATCCCGATaGGGCCCCACGTCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPPTKSR*GPTSLE Trigger: CTCCAAAGACGTGGGGCCTCATCGGGATTTGGTTGG...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACGAGAACACGCCCCAGTaGATGAACACCCCGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDENTPQ*MNTPNL Trigger: CAAGTTCGGGGTGTTCATCCACTGGGGCGTGTTCTC...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCGCAGAGGGTGGCAACTaGGGTAGAGAGATGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPAEGGN*GREMKR Trigger: TCTCTTCATCTCTCTACCCCAGTTGCCACCCTCTGC...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCCTCCCACTTGTGATCTaGCAAGCTCTGTGGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPLPLVI*QALWLE Trigger: TTCAAGCCACAGAGCTTGCCAGATCACAAGTGGGAG...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCAACAGCCGATCCCTTTaGGGTATACCATACAGATGT | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPNSRSL*GIPYRC Trigger: ACATCTGTATGGTATACCTCAAAGGGATCGGCTGTT...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCAGGAAAACTTGTCAATaGTGGTGCACATCTCCCACT | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPRKTCQ*WCTSPT Trigger: AGTGGGAGATGTGCACCAGCATTGACAAGTTTTCCT...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTCGAAGTCGGCGTAGCTaGAGCCGGGCGGGTAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSRSRRS*SRAGSC Trigger: ACAACTACCCGCCCGGCTTCAGCTACGCCGACTTCG...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCTTTGTGAAGCCTTCGTaGTGCTTTGTCGTCAAAACT | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPFVKPS*CFVVKT Trigger: AGTTTTGACGACAAAGCATCACGAAGGCTTCACAAA...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCTGCTCTGAAAATTTCTaGAGAGTTGACCATAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPCSENF*RVDHSS Trigger: GCTGCTATGGTCAACTCTTCAGAAATTTTCAGAGCA...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCAAAACTTGTCAATGCTaGTGCACATCTCCCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPKTCQC*CTSPTC Trigger: ACAAGTGGGAGATGTGCACCAGCATTGACAAGTTTT...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCGCAAGCTCTGTGGCTTaGATTTATCTTCACAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPASSVA*IYLHSY Trigger: ATAACTGTGAAGATAAATTCAAGCCACAGAGCTTGC...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACCCCAAACTTACTGTCTaGACCAGTTCCGAAATGATT | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDPKLTV*TSSEMI Trigger: AATCATTTCGGAACTGGTTCAGACAGTAAGTTTGGG...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACCACTTCAGATCTCCTTaGATTCCCAGCATTGTTATC | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDHFRSP*IPSIVI Trigger: GATAACAATGCTGGGAATTCAAGGAGATCTGAAGTG...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACCTTCTTGCACTCAAATaGTTACTTCACTCCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDLLALK*LLHSCQ Trigger: CTGACAGGAGTGAAGTAATCATTTGAGTGCAAGAAG...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCGCGCCTCTTTCTTCTTaGACTCAAATGATTACTTCA | + |
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Preference number: 4 (lower is better) Translates to: VDHSSLVSLFLSPKALLPAPLSS*TQMITS Trigger: TGAAGTAATCATTTGAGTGCAAGAAGAAAGAGGCGC...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACGTCATTGTAGAGCCATaGAAGAAAATTTGTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDVIVEP*KKICGV Trigger: AACTCCACAAATTTTCTTTCATGGCTCTACAATGAC...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTGCCCACTCCTCCGGGTaGAAGAAGCGCGCAGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSAHSSG*KKRAVN Trigger: GTTCACTGCGCGCTTCTTCCACCCGGAGGAGTGGGC...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACCAGTCCATCTTTAGTTaGTCCAATGTTCAGAAGATA | + |
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Preference number: 4 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDQSIFS*SNVQKI Trigger: TATCTTCTGAACATTGGACCAACTAAAGATGGACTG...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTCCCCCAAAGCTCTCCTaGCCTTTGCAGAAAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSPPKLS*PLQKDC Trigger: ACAGTCTTTCTGCAAAGGGCAGGAGAGCTTTGGGGG...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTTCAAAACTACATACTTaGCGCCCGCGGCCTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSSKLHT*RPRPGR Trigger: TCTTCCAGGCCGCGGGCGCCAAGTATGTAGTTTTGA...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTCTACCACCTCATCCTTaGCAGGGCTGTCATTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSLPPHP*QGCHCR Trigger: TCTACAATGACAGCCCTGTCAAGGATGAGGTGGTAG...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTGAGGCCCCACGTCTTTaGAGTTCCAGTTCCAAGACA | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSEAPRL*SSSSKT Trigger: TGTCTTGGAACTGGAACTCCAAAGACGTGGGGCCTC...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTGAAGCAGGAAAACAGTaGGCAGCGCCTCTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSEAGKQ*AAPLSS Trigger: AGAAGAAAGAGGCGCTGCTCACTGTTTTCCTGCTTC...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTAACTCAGAGTTCAACTaGTCAGTTCCTTCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSNSEFN*SVPSSA Trigger: AGCAGAAGAAGGAACTGAGCAGTTGAACTCTGAGTT...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTCTTTATCTGGATCTGTaGACCACTTCAGATCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSLYLDL*TTSDLL Trigger: AAGGAGATCTGAAGTGGTCCACAGATCCAGATAAAG...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CCA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTATCTGGCAAGCTCTGTaGCTTGAATTTATCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSIWQAL*LEFIFT Trigger: TGTGAAGATAAATTCAAGCCACAGAGCTTGCCAGAT...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTACTGGGGTAGAGAGATaGAGAGACCTTTATCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSTGVER*RDLYLD Trigger: ATCCAGATAAAGGTCTCTTCATCTCTCTACCCCAGT...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTACTTGTCAATGCTGGTaGACATCTCCCACTTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSTCQCW*TSPTCD Trigger: ATCACAAGTGGGAGATGTGCACCAGCATTGACAAGT...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR GCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTTGTAACATCAGACAATaGCATGTCACGACGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSCNIRQ*HVTTIA Trigger: GGCTATCGTCGTGACATGGCATTGTCTGATGTTACA...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTCAGAAAGACTGTTGGTaGCAACTGATGCTAACTAAA | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSQKDCW*QLMLTK Trigger: TTTAGTTAGCATCAGTTGTCACCAACAGTCTTTCTG...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR TCA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTCTTCTTCTGCTGACCTaGTACAGATATAATCACAAT | + |
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Preference number: 4 (lower is better) Translates to: FQILQLMNSEFNCSVPSSLLLLT*YRYNHN Trigger: ATTGTGATTATATCTGTATCAGGTCAGCAGAAGAAG...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 90 bp | GTCGAACCAGGCCGGCAGCGGCCGAGAATCCAGGCTCGGCCAGTCTaGGGTGTAGCGGCGCGGAGGCTGGGCCCGACGCACCGACTCGGC | + |
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Preference number: 5 (lower is better) Translates to: VEPGRQRPRIQARPV*GVAARRLGPTHRLG Trigger: GCCGAGTCGGTGCGTCGGGCCCAGCCTCCGCGCCGCTACACCCCAGACTGGCCGAGCCTGGATTCTCGGCCGCTGCCGGCCTGGTTCGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS GCA 90 bp | CAGACAATGCCATGTCACGACGATAGCCCCAGGAAAACTTGTCAATaGTGGTGCACATCTCCCACTTGTGATCTGGCAAGCTCTGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: QTMPCHDDSPRKTCQ*WCTSPTCDLASSVA Trigger: AGCCACAGAGCTTGCCAGATCACAAGTGGGAGATGTGCACCAGCATTGACAAGTTTTCCTGGGGCTATCGTCGTGACATGGCATTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCAGCCTTCGTGATGCTTaGTCGTCAAAACTACATACT | + |
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Preference number: 5 (lower is better) Translates to: VDHSSLVSLFLSPKALLPSLRDA*SSKLHT Trigger: AGTATGTAGTTTTGACGACAAAGCATCACGAAGGCT...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | GTTGACCATAGCAGCCTGGTAAGCCTTTTCCTTTCCCCCAAAGCTCTCCTGCCCTTTGCAGAAAGACTGTaGGTGACAACTGATGCTAAC | + |
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Preference number: 5 (lower is better) Translates to: VDHSSLVSLFLSPKALLPFAERL*VTTDAN Trigger: GTTAGCATCAGTTGTCACCAACAGTCTTTCTGCAAA...GGGCAGGAGAGCTTTGGGGGAAAGGAAAAGGCTTACCAGGCTGCTATGGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACAGCGCCTCTTTCTTCTaGCACTCAAATGATTACTTC | + |
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Preference number: 5 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDSASFF*HSNDYF Trigger: GAAGTAATCATTTGAGTGCAAGAAGAAAGAGGCGCT...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | ATGTGGTTGAGCTTGCCAAATCCTTCCACCTCCTCCCATAGGCAACAGGGTGACCTTGGCTTAAAGGCATaGAGTAAGCAAGTAGGTTAT | + |
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Preference number: 5 (lower is better) Translates to: MWLSLPNPSTSSHRQQGDLGLKA*SKQVGY Trigger: ATAACCTACTTGCTTACTCAATGCCTTTAAGCCAAG...GTCACCCTGTTGCCTATGGGAGGAGGTGGAAGGATTTGGCAAGCTCAACCACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTAGCATGTGGTTGAGCTaGCCAAATCCTTCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSSMWLS*PNPSTS Trigger: GGAGGTGGAAGGATTTGGCAAGCTCAACCACATGCT...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 90 bp | CCAGGAAAACTTGTCAATGCTGGTGCACATCTCCCACTTGTGATCTaGCAAGCTCTGTGGCTTGAATTTATCTTCACAGTTATAGTATCC | + |
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Preference number: 5 (lower is better) Translates to: PGKLVNAGAHLPLVI*QALWLEFIFTVIVS Trigger: GGATACTATAACTGTGAAGATAAATTCAAGCCACAGAGCTTGCCAGATCACAAGTGGGAGATGTGCACCAGCATTGACAAGTTTTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTATGAACACCCCGAACTaGGCTTCGTCGAACCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: FQILQLMNSEFNCSVPSSMNTPN*ASSNQA Trigger: GGCCTGGTTCGACGAAGCCAAGTTCGGGGTGTTCAT...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTGTCAAAACTACATACTaGGCGCCCGCGGCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: FQILQLMNSEFNCSVPSSVKTTY*APAAWK Trigger: CTTCCAGGCCGCGGGCGCCAAGTATGTAGTTTTGAC...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTGGCAAGCTCTGTGGCTaGAATTTATCTTCACAGTTA | + |
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Preference number: 5 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSGKLCG*NLSSQL Trigger: TAACTGTGAAGATAAATTCAAGCCACAGAGCTTGCC...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | CACAATGGATCTCAGATCTTTGGTCCATTTAGACATCAGGGTAATGTACTCAGTATGGATCTCAGATCTTaGGTCCATTTAGACATCAGG | + |
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Preference number: 5 (lower is better) Translates to: HNGSQIFGPFRHQGNVLSMDLRS*VHLDIR Trigger: CCTGATGTCTAAATGGACCAAAGATCTGAGATCCAT...ACTGAGTACATTACCCTGATGTCTAAATGGACCAAAGATCTGAGATCCATTGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTCTAAATAGCATGTGGTaGAGCTTGCCAAATCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FQILQLMNSEFNCSVPSSLNSMW*SLPNPS Trigger: GGAAGGATTTGGCAAGCTCAACCACATGCTATTTAG...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS-3UTR CAA 90 bp | TTCCAAATATTACAATTGATGAACTCAGAGTTCAACTGCTCAGTTCCTTCTTCTCCACTTCAGATCTCCTaGAATTCCCAGCATTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: FQILQLMNSEFNCSVPSSPLQIS*NSQHCY Trigger: ATAACAATGCTGGGAATTCAAGGAGATCTGAAGTGG...AGAAGAAGGAACTGAGCAGTTGAACTCTGAGTTCATCAATTGTAATATTTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 72 bp | GGCCGGCAGCGGCCGAGAATCCAGGCTCGGCCAGTCTaGGGTGTAGCGGCGCGGAGGCTGGGCCCGACGCAC | + |
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Preference number: 6 (lower is better) Translates to: GRQRPRIQARPV*GVAARRLGPTH Trigger: GTGCGTCGGGCCCAGCCTCCGCGCCGCTACACCCCAGACTGGCCGAGCCTGGATTCTCGGCCGCTGCCGGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS GCA 72 bp | AAGCGCTGGTACTGCGGCCGCCCCTCGCCCTGCCAGTaGCACCAGAACCACTCGCTGCCCCAGGCGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: KRWYCGRPSPCQ*HQNHSLPQAGT Trigger: GGTGCCCGCCTGGGGCAGCGAGTGGTTCTGGTGGCACTGGCAGGGCGAGGGGCGGCCGCAGTACCAGCGCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS GCA 72 bp | CGCATGAAGCGCTGGTACTGCGGCCGCCCCTCGCCCTaGCAGTGCCACCAGAACCACTCGCTGCCCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: RMKRWYCGRPSP*QCHQNHSLPQA Trigger: CGCCTGGGGCAGCGAGTGGTTCTGGTGGCACTGGCAGGGCGAGGGGCGGCCGCAGTACCAGCGCTTCATGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 72 bp | CCCGCGGCCTGGAAGAGGTCGGCCCACTCCTCCGGGTaGAAGAAGCGCGCAGTGAACTGCGGTCCGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: PAAWKRSAHSSG*KKRAVNCGPKS Trigger: CGACTTCGGACCGCAGTTCACTGCGCGCTTCTTCCACCCGGAGGAGTGGGCCGACCTCTTCCAGGCCGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 72 bp | ATTCACCAACCAAATCCCGATGAGGCCCCACGTCTTTaGAGTTCCAGTTCCAAGACACAGGACTCGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: IHQPNPDEAPRL*SSSSKTQDSAS Trigger: ACTGGCCGAGTCCTGTGTCTTGGAACTGGAACTCCAAAGACGTGGGGCCTCATCGGGATTTGGTTGGTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS GCA 72 bp | CACGACGATAGCCCCAGGAAAACTTGTCAATGCTGGTaGACATCTCCCACTTGTGATCTGGCAAGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: HDDSPRKTCQCW*TSPTCDLASSV Trigger: CACAGAGCTTGCCAGATCACAAGTGGGAGATGTGCACCAGCATTGACAAGTTTTCCTGGGGCTATCGTCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS GCA 72 bp | CCATGTCACGACGATAGCCCCAGGAAAACTTGTCAATaGTGGTGCACATCTCCCACTTGTGATCTGGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: PCHDDSPRKTCQ*WCTSPTCDLAS Trigger: GCTTGCCAGATCACAAGTGGGAGATGTGCACCAGCATTGACAAGTTTTCCTGGGGCTATCGTCGTGACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 72 bp | TGTCACGACGATAGCCCCAGGAAAACTTGTCAATGCTaGTGCACATCTCCCACTTGTGATCTGGCAAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CHDDSPRKTCQC*CTSPTCDLASS Trigger: AGAGCTTGCCAGATCACAAGTGGGAGATGTGCACCAGCATTGACAAGTTTTCCTGGGGCTATCGTCGTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS TCA 72 bp | AGTTCCAGTTCCAAGACACAGGACTCGGCCAGTTTGTaGAGCCTTCGTGATGCTTTGTCGTCAAAACTACAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSKTQDSASL*SLRDALSSKLH Trigger: ATGTAGTTTTGACGACAAAGCATCACGAAGGCTTCACAAACTGGCCGAGTCCTGTGTCTTGGAACTGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 72 bp | GGTGCACATCTCCCACTTGTGATCTGGCAAGCTCTGTaGCTTGAATTTATCTTCACAGTTATAGTATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAHLPLVIWQAL*LEFIFTVIVSS Trigger: GGAGGATACTATAACTGTGAAGATAAATTCAAGCCACAGAGCTTGCCAGATCACAAGTGGGAGATGTGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS CCA 72 bp | CTTGTCAATGCTGGTGCACATCTCCCACTTGTGATCTaGCAAGCTCTGTGGCTTGAATTTATCTTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: LVNAGAHLPLVI*QALWLEFIFTV Trigger: AACTGTGAAGATAAATTCAAGCCACAGAGCTTGCCAGATCACAAGTGGGAGATGTGCACCAGCATTGACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS TCA 72 bp | CACCTCATCCTTGACAGGGCTGTCATTGTAGAGCCATaGAAGAAAATTTGTGGAGTTCCAGTAAGTATCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLILDRAVIVEP*KKICGVPVSIR Trigger: CCTGATACTTACTGGAACTCCACAAATTTTCTTTCATGGCTCTACAATGACAGCCCTGTCAAGGATGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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| CDS TCA 72 bp | ACATCTCCCACTTGTGATCTGGCAAGCTCTGTGGCTTaGATTTATCTTCACAGTTATAGTATCCTCCATGGT | + |
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Preference number: 6 (lower is better) Translates to: TSPTCDLASSVA*IYLHSYSILHG Trigger: ACCATGGAGGATACTATAACTGTGAAGATAAATTCAAGCCACAGAGCTTGCCAGATCACAAGTGGGAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000374479.4 |
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