RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FUBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162613

Ensembl transcript IDs: ENST00000294623.8, ENST00000370767.5, ENST00000370768.7, ENST00000421641.1, ENST00000470287.1, ENST00000474632.5, ENST00000483894.5, ENST00000487684.1, ENST00000488814.5, ENST00000489495.5, ENST00000492405.5, ENST00000492724.1

Found 416 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATACACAGCACAGTCCTCCTCACCCCTACAGAGCTAGTTCTATACTaGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGAC +
Preference number: 1 (lower is better)
Translates to: IHSTVLLTPTELVLY*LDQTCTSTDNGKTD
Trigger: GTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAGAACTAGCTCTGTAGGGGTGAGGAGGACTGTGCTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR CCA 90 bp TTCTACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATaGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAGG +
Preference number: 1 (lower is better)
Translates to: FYIEPFYGPCSSAHQ*HTLKGFLFMGNYLR
Trigger: CCTGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR TCA 90 bp GTTCATCAATTTGTCATTCTGATGTACTTACAGTGCAATGCTCCTTaGAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCAC +
Preference number: 1 (lower is better)
Translates to: VHQFVILMYLQCNAP*RNTIKDDTQHSPPH
Trigger: GTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTGTAAGTACATCAGAATGACAAATTGATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR GCA 90 bp CGTATGGCATTTGCATTATGTGGAACATTGACAAAAAGATACTGTTaGAGTTCATCAATTTGTCATTCTGATGTACTTACAGTGCAATGC +
Preference number: 1 (lower is better)
Translates to: RMAFALCGTLTKRYC*SSSICHSDVLTVQC
Trigger: GCATTGCACTGTAAGTACATCAGAATGACAAATTGATGAACTGCAACAGTATCTTTTTGTCAATGTTCCACATAATGCAAATGCCATACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR-3UTR TCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTaGAGGAACACAATCAAGGAT +
Preference number: 2 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGKCNAP*RNTIKD
Trigger: ATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
3UTR TCA 72 bp ACAGTGCAATGCTCCTTGAAGGAACACAATCAAGGATaGTACACAGCACAGTCCTCCTCACCCCTACAGAGC +
Preference number: 3 (lower is better)
Translates to: TVQCSLKEHNQG*YTAQSSSPLQS
Trigger: GCTCTGTAGGGGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR CCA 72 bp ACAGTCCTCCTCACCCCTACAGAGCTAGTTCTATACTaGCTGGATCAAACCTGCACTTCAACAGACAATGGC +
Preference number: 3 (lower is better)
Translates to: TVLLTPTELVLY*LDQTCTSTDNG
Trigger: GCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAGAACTAGCTCTGTAGGGGTGAGGAGGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR TCA 72 bp AGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTaGAGGAACACAATCAAGGATGATACACAGCACAGT +
Preference number: 3 (lower is better)
Translates to: RWKVWEGKCNAP*RNTIKDDTQHS
Trigger: ACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294623.8
3UTR-3UTR CAA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCAGTAGCAGATTGCCTTaGAATACACAACCACAAAAA +
Preference number: 3 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLSSRLP*NTQPQK
Trigger: TTTTTGTGGTTGTGTATTCAAAGGCAATCTGCTACT...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR-3UTR CAA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAGGAAGCAGTAGCAGATaGCCTTTGAATACACAACCA +
Preference number: 3 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISGSSSR*PLNTQP
Trigger: TGGTTGTGTATTCAAAGGCAATCTGCTACTGCTTCC...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR GCA 72 bp CCTACAGAGCTAGTTCTATACTGGCTGGATCAAACCTaGACTTCAACAGACAATGGCAAGACAGACTGTATT +
Preference number: 3 (lower is better)
Translates to: PTELVLYWLDQT*TSTDNGKTDCI
Trigger: AATACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAGAACTAGCTCTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR GCA 72 bp AATTTTACCTTCTACATTGAGCCCTTCTATGGTCCATaGTCATCGGCTCACCAATGGCATACACTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: NFTFYIEPFYGP*SSAHQWHTLKG
Trigger: TCCTTTGAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTAGAAGGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR TCA 72 bp TTCTCAATTATGATTTGCCAATTTTACCTTCTACATTaGGCCCTTCTATGGTCCATGCTCATCGGCTCACCA +
Preference number: 3 (lower is better)
Translates to: FSIMICQFYLLH*ALLWSMLIGSP
Trigger: TGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTAGAAGGTAAAATTGGCAAATCATAATTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR TCA 72 bp TTTGTCATTCTGATGTACTTACAGTGCAATGCTCCTTaGAGGAACACAATCAAGGATGATACACAGCACAGT +
Preference number: 3 (lower is better)
Translates to: FVILMYLQCNAP*RNTIKDDTQHS
Trigger: ACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTGTAAGTACATCAGAATGACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR GCA 72 bp TATCCAATGCATTCAAATCAACTGGCTCACCTTTTCTaGTTTCCATTTATTTCAGACTTAAGATCAGCGTCA +
Preference number: 3 (lower is better)
Translates to: YPMHSNQLAHLF*FPFISDLRSAS
Trigger: TGACGCTGATCTTAAGTCTGAAATAAATGGAAAGCAGAAAAGGTGAGCCAGTTGATTTGAATGCATTGGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
3UTR TCA 72 bp CAACTAACCAAAACTCAACAGGCTCTCAAGTTTCAATaGGCCCCTTTATATTATCAATTGTACATACCTATC +
Preference number: 3 (lower is better)
Translates to: QLTKTQQALKFQ*APLYYQLYIPI
Trigger: GATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCCTGTTGAGTTTTGGTTAGTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGGGCCTGGGACACCATaGGGCCCATGGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: WCFLQQNLRWKVWEGKCNGPGTP*GPWGTG
Trigger: ACCTGTACCCCATGGGCCCCATGGTGTCCCAGGCCC...ATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTAGGTCCATGGGGGCCTaGGACACCATGGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNARSMGA*DTMGPM
Trigger: CATGGGCCCCATGGTGTCCCAGGCCCCCATGGACCT...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCAGGTCCATGGGGGCCTaGGACACCATGGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLRSMGA*DTMGPM
Trigger: CATGGGCCCCATGGTGTCCCAGGCCCCCATGGACCT...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCGGCCCAGGAGGTCCATaGGGGCCTGGGACACCATGG +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTGPGGP*GPGTPW
Trigger: CCATGGTGTCCCAGGCCCCCATGGACCTCCTGGGCC...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTCCCGGTCCATCGCCATaGTGGAAGCCAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPPGPSP*WKPGAG
Trigger: ACCAGCTCCTGGCTTCCATCATGGCGATGGACCGGG...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp TGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATTGCACCTGCAGGGGCTaGTGGTGGTGGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: WCFLQQNLRWKVWEGKCNCTCRG*WWWLCL
Trigger: CAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCA...ATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp CTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGTAGTTGGTGCACCTaGAGGGGCTGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVLFAAEPKVEGLGRQVQCSWCT*RGCWWW
Trigger: CCACCACCAGCAGCCCCTGCAGGTGCACCAACTACA...TTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCGGGCCTGGGACACCATaGGGCCCATGGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTGPGTP*GPWGTG
Trigger: ACCTGTACCCCATGGGCCCCATGGTGTCCCAGGCCC...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTGGCCCAGGAGGTCCATaGGGGCCTGGGACACCATGG +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCGPGGP*GPGTPW
Trigger: CCATGGTGTCCCAGGCCCCCATGGACCTCCTGGGCC...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCCCGGTCCATCGCCATaGTGGAAGCCAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGPGPSP*WKPGAG
Trigger: ACCAGCTCCTGGCTTCCATCATGGCGATGGACCGGG...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCTGCACCTGCAGGGGCTaGTGGTGGTGGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTCTCRG*WWWLCL
Trigger: CAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCA...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGACACCATGGGGCCCATaGGGTACAGGTGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKTPWGP*GTGGPK
Trigger: TTTAGGGCCACCTGTACCCCATGGGCCCCATGGTGT...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp CTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAACGTTCCTGCCTTAGCTaGATCAGGAGGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVLFAAEPKVEGLGRQVQRSCLS*IRRSLL
Trigger: CAGCAGGCTCCTCCTGATCCAGCTAAGGCAGGAACG...TTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAGGGGCTGCTGGTGGTaGCTGTGCTTGCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGRGCWW*LCLLLI
Trigger: TATCAACAGCAAGCACAGCCACCACCAGCAGCCCCT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGAGCAGCCCAAGCTGCTaGATTTGGATCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRSSPSC*IWIRSC
Trigger: GCAGGAACGGATCCAAATTCAGCAGCTTGGGCTGCT...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCCCGGGCTCTCTGCAGTaGATCTTTGAAAGCGTCGTT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGPGSLQ*IFESVV
Trigger: AACGACGCTTTCAAAGATGCACTGCAGAGAGCCCGG...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTAGGAGCCGGGCCTGGTaGTCCAGGATTATAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNARSRAW*SRIIRC
Trigger: GCACCTTATAATCCTGGACCACCAGGCCCGGCTCCT...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCATTTCCCCATCCCTaGGGAGCATATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WCFLQQNLRWKVWEGKCNAFPHP*GAYGAG
Trigger: TCCAGCCCCATATGCTCCCCAGGGATGGGGAAATGC...ATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGAGGGGCTGCTGGTGGTaGCTGTGCTTGCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRRGCWW*LCLLLI
Trigger: TATCAACAGCAAGCACAGCCACCACCAGCAGCCCCT...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGGGCTGCACTATAATCTaGCTGACCACCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKGCTII*LTTWRS
Trigger: GCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCC...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGATCTGCCGGGCTCTCTaGAGTGCATCTTTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKICRAL*SASLKA
Trigger: CGCTTTCAAAGATGCACTGCAGAGAGCCCGGCAGAT...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp TGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATCTGCCAGTGTGGATATaGATTTCCCCATCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WCFLQQNLRWKVWEGKCNLPVWI*ISPSLG
Trigger: CCCCAGGGATGGGGAAATGCATATCCACACTGGCAG...ATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCCCTTCTATGGTCCATaGTCATCGGCTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRPFYGP*SSAHQW
Trigger: CCATTGGTGAGCCGATGAGCATGGACCATAGAAGGG...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp CTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCCATACAGGACCTTTCTaGAAGGCCACCACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LFAAEPKVEGLGRQVQCSHTGPF*KATTVR
Trigger: CCTGACAGTGGTGGCCTTCCAGAAAGGTCCTGTATG...GGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAGGGAGCATATGGGGCTaGAGGACCATGAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISGSIWG*RTMRSR
Trigger: CCGGCTCCTCATGGTCCTCCAGCCCCATATGCTCCC...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCCTGCACTGAGGTGCTaGAGGATGCTGTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGPALRC*RMLWHS
Trigger: GGAATGCCACAGCATCCTCCAGCACCTCAGTGCAGG...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCTTCCTGTTGTATGCGTaGGATCTGTTCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGFLLYA*DLFTSS
Trigger: AGAGGAGGTGAACAGATCTCACGCATACAACAGGAA...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCAGCAGCCCAAGCTGCTaGATTTGGATCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLSSPSC*IWIRSC
Trigger: GCAGGAACGGATCCAAATTCAGCAGCTTGGGCTGCT...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGGTCCCATGTTCCAGTTaGCTTGACCTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRVPCSS*LDLYLF
Trigger: GAAGAGGTAGAGGTCAAGGCAACTGGAACATGGGAC...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGATTTGGATCCGTTCCTaGCTTAGCTGGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRIWIRS*LSWIRR
Trigger: CCTCCTGATCCAGCTAAGGCAGGAACGGATCCAAAT...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAGTCGGAGCAGGAACTaGCTGACCCATTTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGSRSRN*LTHFLV
Trigger: TACAAGAAAATGGGTCAGGCAGTTCCTGCTCCGACT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGATACTCAGCCCAGGCTaGACTATAATCTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRILSPG*TIIWLT
Trigger: GGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTAT...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCACACCATGGGGCCCATaGGGTACAGGTGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLTPWGP*GTGGPK
Trigger: TTTAGGGCCACCTGTACCCCATGGGCCCCATGGTGT...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAGGCCCAGGAGGTCCATaGGGGCCTGGGACACCATGG +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTGPGGP*GPGTPW
Trigger: CCATGGTGTCCCAGGCCCCCATGGACCTCCTGGGCC...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCGCATTTCCCCATCCCTaGGGAGCATATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLAFPHP*GAYGAG
Trigger: TCCAGCCCCATATGCTCCCCAGGGATGGGGAAATGC...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCTGCTGCTGCCAGTGTaGATATGCATTTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNALLLPV*ICISPS
Trigger: GGATGGGGAAATGCATATCCACACTGGCAGCAGCAG...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLCWRML*HSLGTC
Trigger: ACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCA...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTTTGGCCCTGAGGTGCTaGAGGATGCTGTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCLALRC*RMLWHS
Trigger: GGAATGCCACAGCATCCTCCAGCACCTCAGGGCCAA...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCCTAAGGTGGAAGGTCTaGGAAGGCACTGTGAAGTAT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGLRWKV*EGTVKY
Trigger: ATACTTCACAGTGCCTTCCCAGACCTTCCACCTTAG...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGACAGATCTTTGCTGCTaGTGCATCGGTGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKTDLCC*CIGGNC
Trigger: ACAGTTACCACCGATGCATCAGCAGCAAAGATCTGT...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGTTCCTGTTGTATGCGTaGGATCTGTTCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRFLLYA*DLFTSS
Trigger: AGAGGAGGTGAACAGATCTCACGCATACAACAGGAA...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCATTCCGAACTTCTCTaGAACCGCCTTGATCACGAA +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRHSELL*NRLDHE
Trigger: TTCGTGATCAAGGCGGTTTCAGAGAAGTTCGGAATG...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCTCATCTGGCTTAAACTaGATGCGAACACCAGCATCA +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGSSGLN*MRTPAS
Trigger: TGATGCTGGTGTTCGCATTCAGTTTAAGCCAGATGA...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTATAGTCTGCCATGGTTaGACTATAAGAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNAIVCHG*TIRAAA
Trigger: GGCAGCGGCTCTTATAGTGCAACCATGGCAGACTAT...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCCCGGGCTCTCTGCAGTaGATCTTTGAAAGCGTCGTT +
Preference number: 4 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLPGSLQ*IFESVV
Trigger: AACGACGCTTTCAAAGATGCACTGCAGAGAGCCCGG...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTACCTCCAATTTTTGCTaGAATCTGCCGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNATSNFC*NLPGSL
Trigger: CAGAGAGCCCGGCAGATTGCAGCAAAAATTGGAGGT...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCATACAGGACCTTTCTaGAAGGCCACCACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGHTGPF*KATTVR
Trigger: CCTGACAGTGGTGGCCTTCCAGAAAGGTCCTGTATG...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCATGTTGACATCGGTCTaGAGGTCCTGTTATTTGTGC +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGMLTSV*RSCYLC
Trigger: GCACAAATAACAGGACCTCCAGACCGATGTCAACAT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGGGCCTGGGACACCATaGGGCCCATGGGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEGPGTP*GPWGTG
Trigger: ACCTGTACCCCATGGGCCCCATGGTGTCCCAGGCCC...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAAGGTCCATGGGGGCCTaGGACACCATGGGGCCCATG +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTRSMGA*DTMGPM
Trigger: CATGGGCCCCATGGTGTCCCAGGCCCCCATGGACCT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTGTTGTATGGTCCCATTaGAGTTCCAGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCVVWSH*SSRPWR
Trigger: CCTCCAGGGCCTGGAACTCCAATGGGACCATACAAC...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCAGGTGCAGGGTTGTATaGTCCCATTGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTRCRVV*SHWSSR
Trigger: CCTGGAACTCCAATGGGACCATACAACCCTGCACCT...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCACTCTTCCCAAGCCTTaGTATAATCAACCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGTLPKP*YNQPVQ
Trigger: CTGGACAGGTTGATTATACCAAGGCTTGGGAAGAGT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTCTAAGGTGGAAGGTCTaGGAAGGCAAGTGCAATGCT +
Preference number: 4 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPLRWKV*EGKCNA
Trigger: AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAG...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAACCCGGTCCATCGCCATaGTGGAAGCCAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEPGPSP*WKPGAG
Trigger: ACCAGCTCCTGGCTTCCATCATGGCGATGGACCGGG...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCTTCTGCGGCCCGTCTTaGATCATAACCATTTTAACT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGFCGPS*IITILT
Trigger: AGTTAAAATGGTTATGATTCAAGACGGGCCGCAGAA...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTCATTCCGAACTTCTCTaGAACCGCCTTGATCACGAA +
Preference number: 4 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPHSELL*NRLDHE
Trigger: TTCGTGATCAAGGCGGTTTCAGAGAAGTTCGGAATG...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTGAACACAATCAAGGATaGTACACAGCACAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPEHNQG*YTAQSS
Trigger: GGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTC...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTATCACCTCCAATTTTTaGTGCAATCTGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPITSNF*CNLPGS
Trigger: AGAGCCCGGCAGATTGCAGCAAAAATTGGAGGTGAT...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGCAGATTCCTGTTGTATaGGTGAGATCTGTTCACCTC +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKQIPVV*VRSVHL
Trigger: GAGGTGAACAGATCTCACGCATACAACAGGAATCTG...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCGTCCCATGTTCCAGTTaGCTTGACCTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTVPCSS*LDLYLF
Trigger: GAAGAGGTAGAGGTCAAGGCAACTGGAACATGGGAC...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCGGAGGAGCCTGCTGCTaGCAGTGTGGATATGCATTT +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLGGACC*QCGYAF
Trigger: AAATGCATATCCACACTGGCAGCAGCAGGCTCCTCC...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATTGCTGGTGGTGGCTGTaGTTGCTGTTGATAATAGTG +
Preference number: 4 (lower is better)
Translates to: WCFLQQNLRWKVWEGKCNCWWWL*LLLIIV
Trigger: CACTATTATCAACAGCAAGCACAGCCACCACCAGCA...ATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAATGCACCTGCAGGGGCTaGTGGTGGTGGCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAECTCRG*WWWLCL
Trigger: CAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCA...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTTTATTGGCCCTGAGGTaGTGGAGGATGCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCLLALR*WRMLWH
Trigger: ATGCCACAGCATCCTCCAGCACCTCAGGGCCAATAA...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCTGGCTGGATCAAACCTaGACTTCAACAGACAATGGC +
Preference number: 4 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLWLDQT*TSTDNG
Trigger: GCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCA...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGTTGAATAGTCTGCCATaGTTGCACTATAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRLNSLP*LHYKSR
Trigger: GCGGCTCTTATAGTGCAACCATGGCAGACTATTCAA...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGAACCGTTTTGCTGACTaGACAGATTCAGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: YLVLFAAEPKVEGLGRQVNRFAD*TDSGVP
Trigger: TGGAACACCTGAATCTGTCCAGTCAGCAAAACGGTT...CACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGAACCGTTTTGCTGACTaGACAGATTCAGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRNRFAD*TDSGVP
Trigger: TGGAACACCTGAATCTGTCCAGTCAGCAAAACGGTT...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCAGGTGCAGGGTTGTATaGTCCCATTGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLRCRVV*SHWSSR
Trigger: CCTGGAACTCCAATGGGACCATACAACCCTGCACCT...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAATGAGGAGCCGGGCCTaGTGGTCCAGGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISMRSRA*WSRIIR
Trigger: CCTTATAATCCTGGACCACCAGGCCCGGCTCCTCAT...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTCTGCTGCTGCCAGTGTaGATATGCATTTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCLLLPV*ICISPS
Trigger: GGATGGGGAAATGCATATCCACACTGGCAGCAGCAG...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCAGTTTGAGTTGTAGTTaGTGCACCTGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLSLSCS*CTCRGC
Trigger: GCAGCCCCTGCAGGTGCACCAACTACAACTCAAACT...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTAGTTTGAGTTGTAGTTaGTGCACCTGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCSLSCS*CTCRGC
Trigger: GCAGCCCCTGCAGGTGCACCAACTACAACTCAAACT...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGATCTGGCTGACCACCTaGAGGAGCCCCAGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKIWLTT*RSPSRS
Trigger: GCTCCGACTGGGGCTCCTCCAGGTGGTCAGCCAGAT...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAAGAGCTAGTTCTATACTaGCTGGATCAAACCTGCACT +
Preference number: 4 (lower is better)
Translates to: LVLFAAEPKVEGLGRQVQELVLY*LDQTCT
Trigger: AGTGCAGGTTTGATCCAGCCAGTATAGAACTAGCTC...TTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCTCCTCTGCCAATTATaGATCCAACCATTCCATCTG +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNALLCQL*IQPFHL
Trigger: CAGATGGAATGGTTGGATTCATAATTGGCAGAGGAG...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGTTCTGCGGCCCGTCTTaGATCATAACCATTTTAACT +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRFCGPS*IITILT
Trigger: AGTTAAAATGGTTATGATTCAAGACGGGCCGCAGAA...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGAAGTGCAATGCTCCTTaGAGGAACACAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRKCNAP*RNTIKD
Trigger: ATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTT...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTACTCCCCTTTCCCTCTaGAAGTACTCTGCTATTCCT +
Preference number: 4 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGTPLSL*KYSAIP
Trigger: AGGAATAGCAGAGTACTTTCAGAGGGAAAGGGGAGT...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCACCTCCAATTTTTGCTaGAATCTGCCGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLTSNFC*NLPGSL
Trigger: CAGAGAGCCCGGCAGATTGCAGCAAAAATTGGAGGT...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp CTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCAGGTCCTGTTATTTGTaGTATCCTTTCGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LFAAEPKVEGLGRQVQCSRSCYL*YPFGCC
Trigger: ACAACACCCGAAAGGATAGCACAAATAACAGGACCT...GGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCATTCTTGCACCAGACTaGTGGCTTATGCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGILAPD*WLMLFM
Trigger: CATAAAAAGCATAAGCCAGCAGTCTGGTGCAAGAAT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGCTGAAGTTCTATTCTTaGACCAGACTGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKLKFYS*TRLLAY
Trigger: ATAAGCCAGCAGTCTGGTGCAAGAATAGAACTTCAG...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTTCCAGGATTATAAGGTaGAGGGTTGTATGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNASRIIR*RVVWSH
Trigger: ATGGGACCATACAACCCTGCACCTTATAATCCTGGA...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACATGTAGTTGGTGCACCTaGAGGGGCTGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTCSWCT*RGCWWW
Trigger: CCACCACCAGCAGCCCCTGCAGGTGCACCAACTACA...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTAGTCGGAGCAGGAACTaGCTGACCCATTTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGSRSRN*LTHFLV
Trigger: TACAAGAAAATGGGTCAGGCAGTTCCTGCTCCGACT...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCCTGGGCATAATAGGCTaGTTGTTGTCTATAATACTC +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGLGIIG*LLSIIL
Trigger: GAGTATTATAGACAACAAGCAGCCTATTATGCCCAG...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTGTTGTGCTTACCTGGTaGTTTTTGCAGCAGAACCTA +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNAVVLTW*FLQQNL
Trigger: TAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAAC...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp CTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTATGTCCTTAGGTTGTaGTTACCTGGTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LFAAEPKVEGLGRQVQCSYVLRL*LPGAFC
Trigger: GCAAAAAGCACCAGGTAAGCACAACCTAAGGACATA...GGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCGTACTTACAGTGCAATaGTCCTTGAAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGVLTVQ*SLKEHN
Trigger: ATTGTGTTCCTTCAAGGAGCATTGCACTGTAAGTAC...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAGCAAATCTTGGAATaGGGACATCTATCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRQQILE*GHLSLH
Trigger: ATGAAGGGATAGATGTCCCCATTCCAAGATTTGCTG...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCGGGAGCATATGGGGCTaGAGGACCATGAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGGSIWG*RTMRSR
Trigger: CCGGCTCCTCATGGTCCTCCAGCCCCATATGCTCCC...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCACGTTCCTGCCTTAGCTaGATCAGGAGGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCARSCLS*IRRSLL
Trigger: CAGCAGGCTCCTCCTGATCCAGCTAAGGCAGGAACG...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGGATTCCTCTTTATaGGTAACTATCTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGKDSSL*VTISGP
Trigger: AGGTCCTGAGATAGTTACCCATAAAGAGGAATCCTT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTTCTCTGAAACCGCCTTaGTCACGAATTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNASLKPP*SRINSN
Trigger: GTTAGAGTTAATTCGTGATCAAGGCGGTTTCAGAGA...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTTCATCTGGCTTAAACTaGATGCGAACACCAGCATCA +
Preference number: 4 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGSSGLN*MRTPAS
Trigger: TGATGCTGGTGTTCGCATTCAGTTTAAGCCAGATGA...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCGGTGGAGGATTTCTCTaGAGTTCTATTCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTGGGFL*SSILAP
Trigger: TGGTGCAAGAATAGAACTTCAGAGAAATCCTCCACC...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp GCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTGAAGGAACAATCTTTTCTTCTATaGGTTGCCGAGCATAGTCTA +
Preference number: 4 (lower is better)
Translates to: AEPKVEGLGRQVQCSLKEQSFLL*VAEHSL
Trigger: TAGACTATGCTCGGCAACTCATAGAAGAAAAGATTG...TTCCTTCAAGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCCAGTGCAATGCTCCTTaGAGGAACACAATCAAGGAT +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTQCNAP*RNTIKD
Trigger: ATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTG...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCTCATTATTTGCAAACTaGAATCCCCTTCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGSLFAN*NPLLSD
Trigger: ATCAGACAGAAGGGGATTTCAGTTTGCAAATAATGA...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCGAGCTATCTGTATTTTaGATCCAGATTCCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGELSVF*IQIPVV
Trigger: TACAACAGGAATCTGGATGCAAAATACAGATAGCTC...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCCTGAAGTTCTATTCTTaGACCAGACTGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLLKFYS*TRLLAY
Trigger: ATAAGCCAGCAGTCTGGTGCAAGAATAGAACTTCAG...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAATACTCAGCCCAGGCTaGACTATAATCTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISILSPG*TIIWLT
Trigger: GGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTAT...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCGCCAACAGCAAATCTTaGAATGGGGACATCTATCCC +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLANSKS*NGDIYP
Trigger: GGGATAGATGTCCCCATTCCAAGATTTGCTGTTGGC...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTTGTTGTCCCATCATCTaGCTTAAACTGAATGCGAAC +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNACCPII*LKLNAN
Trigger: GTTCGCATTCAGTTTAAGCCAGATGATGGGACAACA...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCTGTTGTCCCATCATCTaGCTTAAACTGAATGCGAAC +
Preference number: 4 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLCCPII*LKLNAN
Trigger: GTTCGCATTCAGTTTAAGCCAGATGATGGGACAACA...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCCTTGCACCAGACTGCTaGCTTATGCTTTTTATGGTT +
Preference number: 4 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLLAPDC*LMLFMV
Trigger: AACCATAAAAAGCATAAGCCAGCAGTCTGGTGCAAG...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGGAGCCGGGCCTGGTaGTCCAGGATTATAAGGTGC +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKRSRAW*SRIIRC
Trigger: GCACCTTATAATCCTGGACCACCAGGCCCGGCTCCT...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAGGGAGCATATGGGGCTaGAGGACCATGAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRGSIWG*RTMRSR
Trigger: CCGGCTCCTCATGGTCCTCCAGCCCCATATGCTCCC...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAGCATTTCCCCATCCCTaGGGAGCATATGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTAFPHP*GAYGAG
Trigger: TCCAGCCCCATATGCTCCCCAGGGATGGGGAAATGC...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACTCTTCCCAAGCCTTaGTATAATCAACCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLTLPKP*YNQPVQ
Trigger: CTGGACAGGTTGATTATACCAAGGCTTGGGAAGAGT...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATCTGGCTGACCACCTaGAGGAGCCCCAGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRIWLTT*RSPSRS
Trigger: GCTCCGACTGGGGCTCCTCCAGGTGGTCAGCCAGAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKCWRML*HSLGTC
Trigger: ACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCA...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCTCATCGGCTCACCAATaGCATACACTCAAAGGATTC +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTSSAHQ*HTLKGF
Trigger: GAATCCTTTGAGTGTATGCCATTGGTGAGCCGATGA...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCAAAAGAGTCATTTTaGGGAGCAACTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNAPKESF*GATFLA
Trigger: TGCTAAGAAAGTTGCTCCTCAAAATGACTCTTTTGG...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp TGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTATTTCCTTGGCTTGTTaGACTTTATATGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CFLQQNLRWKVWEGKCNAISLAC*TLYGSP
Trigger: AGGAGACCCATATAAAGTTCAACAAGCCAAGGAAAT...AGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR TCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAAGCAGCCCAAGCTGCTaGATTTGGATCCGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTSSPSC*IWIRSC
Trigger: GCAGGAACGGATCCAAATTCAGCAGCTTGGGCTGCT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCCTTGTCCATTAGTTTaGGTTGTAGTTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLPCPLV*VVVGAP
Trigger: AGGTGCACCAACTACAACTCAAACTAATGGACAAGG...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAGTTAACATTTCACTaGTGCACATGCCTTTTATCA +
Preference number: 4 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRQLTFH*CTCLLS
Trigger: TGATAAAAGGCATGTGCATCAGTGAAATGTTAACTG...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCAGGACCTGATTTTATaGGCTATGATTTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGQDLIL*AMIWCL
Trigger: CAAGCACCAAATCATAGCTCATAAAATCAGGTCCTG...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGCACTATAAGAGCCGCTaGCGCCTGTTCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKHYKSR*RLFRDF
Trigger: GAAGTCTCTGAACAGGCGGCAGCGGCTCTTATAGTG...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAACTGCCAGTGTGGATATaGATTTCCCCATCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAELPVWI*ISPSLG
Trigger: CCCCAGGGATGGGGAAATGCATATCCACACTGGCAG...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGGAGGAGCCTGCTGCTaGCAGTGTGGATATGCATTT +
Preference number: 4 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKGGACC*QCGYAF
Trigger: AAATGCATATCCACACTGGCAGCAGCAGGCTCCTCC...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATGTAGTTGGTGCACCTaGAGGGGCTGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAECSWCT*RGCWWW
Trigger: CCACCACCAGCAGCCCCTGCAGGTGCACCAACTACA...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTCCAACCATTCCATCTaGAACTTTGTATTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKSNHSI*NFVFFC
Trigger: ACAGAAGAATACAAAGTTCCAGATGGAATGGTTGGA...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCCAGCAAATCTTGGAATaGGGACATCTATCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTQQILE*GHLSLH
Trigger: ATGAAGGGATAGATGTCCCCATTCCAAGATTTGCTG...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCCTTGCACCAGACTGCTaGCTTATGCTTTTTATGGTT +
Preference number: 4 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLLAPDC*LMLFMV
Trigger: AACCATAAAAAGCATAAGCCAGCAGTCTGGTGCAAG...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTATTAGGATCTGCATTTaGTGGAGGATTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPIRICI*WRISLK
Trigger: CTTCAGAGAAATCCTCCACCAAATGCAGATCCTAAT...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCATTAGGATCTGCATTTaGTGGAGGATTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLIRICI*WRISLK
Trigger: CTTCAGAGAAATCCTCCACCAAATGCAGATCCTAAT...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCACACCATGGGGCCCATaGGGTACAGGTGGCCCTAAA +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGTPWGP*GTGGPK
Trigger: TTTAGGGCCACCTGTACCCCATGGGCCCCATGGTGT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTTGTATGGTCCCATTaGAGTTCCAGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEVVWSH*SSRPWR
Trigger: CCTCCAGGGCCTGGAACTCCAATGGGACCATACAAC...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAATGAGGAGCCGGGCCTaGTGGTCCAGGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTMRSRA*WSRIIR
Trigger: CCTTATAATCCTGGACCACCAGGCCCGGCTCCTCAT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGGGGCTGCTGGTGGTaGCTGTGCTTGCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKRGCWW*LCLLLI
Trigger: TATCAACAGCAAGCACAGCCACCACCAGCAGCCCCT...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCTGCAAATACATTTGCTaGAATGTGTACATCTACACT +
Preference number: 4 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGCKYIC*NVYIYT
Trigger: AGTGTAGATGTACACATTCCAGCAAATGTATTTGCA...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGATCTGCTTTGCTGCTaGTGCATCGGTGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKDLLCC*CIGGNC
Trigger: ACAGTTACCACCGATGCATCAGCAGCAAAGCAGATC...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAACACTATAAGAGCCGCTaGCGCCTGTTCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEHYKSR*RLFRDF
Trigger: GAAGTCTCTGAACAGGCGGCAGCGGCTCTTATAGTG...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCACAGATTCCTGTTGTATaGGTGAGATCTGTTCACCTC +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISQIPVV*VRSVHL
Trigger: GAGGTGAACAGATCTCACGCATACAACAGGAATCTG...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCATCCAGGATTATAAGGTaGAGGGTTGTATGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISSRIIR*RVVWSH
Trigger: ATGGGACCATACAACCCTGCACCTTATAATCCTGGA...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGGAGGAGCCTGCTGCTaGCAGTGTGGATATGCATTT +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEGGACC*QCGYAF
Trigger: AAATGCATATCCACACTGGCAGCAGCAGGCTCCTCC...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTGCAAATCCCTGAGGTaGTGGAGGATGCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKCKSLR*WRMLWH
Trigger: ATGCCACAGCATCCTCCAGCACCTCAGGGATTTGCA...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCATTGAATAGTCTGCCATaGTTGCACTATAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISLNSLP*LHYKSR
Trigger: GCGGCTCTTATAGTGCAACCATGGCAGACTATTCAA...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACACATACAGGACCTTTCTaGAAGGCCACCACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTHTGPF*KATTVR
Trigger: CCTGACAGTGGTGGCCTTCCAGAAAGGTCCTGTATG...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGCTAACACCATTTCCTTaGCTTGTTGAACTTTATATG +
Preference number: 4 (lower is better)
Translates to: LTWCFLQQNLRWKVWEGKLTPFP*LVELYM
Trigger: CATATAAAGTTCAACAAGCCAAGGAAATGGTGTTAG...CTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CCA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATAGGAGCCGGGCCTGGTaGTCCAGGATTATAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHRSRAW*SRIIRC
Trigger: GCACCTTATAATCCTGGACCACCAGGCCCGGCTCCT...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACACTGCTGCTGCCAGTGTaGATATGCATTTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTLLLPV*ICISPS
Trigger: GGATGGGGAAATGCATATCCACACTGGCAGCAGCAG...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGACGTTCCTGCCTTAGCTaGATCAGGAGGAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRRSCLS*IRRSLL
Trigger: CAGCAGGCTCCTCCTGATCCAGCTAAGGCAGGAACG...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGTTTGAGTTGTAGTTaGTGCACCTGCAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKSLSCS*CTCRGC
Trigger: GCAGCCCCTGCAGGTGCACCAACTACAACTCAAACT...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCGGCTGCACTATAATCTaGCTGACCACCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGGCTII*LTTWRS
Trigger: GCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCC...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGCWRML*HSLGTC
Trigger: ACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCA...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAAAATCCCTGAGGTGCTaGAGGATGCTGTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTKSLRC*RMLWHS
Trigger: GGAATGCCACAGCATCCTCCAGCACCTCAGGGATTT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCTTCTTAGCATCTGGTTaGTCTCCATCTTCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLFLASG*SPSSKG
Trigger: ACCTTTAGAAGATGGAGATCAACCAGATGCTAAGAA...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCATTCCTGTTGTATGCGTaGGATCTGTTCACCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAFLLYA*DLFTSS
Trigger: AGAGGAGGTGAACAGATCTCACGCATACAACAGGAA...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCATTTCCTTGGCTTGTTaGACTTTATATGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLISLAC*TLYGSP
Trigger: AGGAGACCCATATAAAGTTCAACAAGCCAAGGAAAT...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAGATCTGCTTTGCTGCTaGTGCATCGGTGGTAACTGT +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTDLLCC*CIGGNC
Trigger: ACAGTTACCACCGATGCATCAGCAGCAAAGCAGATC...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGATAGTCTGCCATGGTTaGACTATAAGAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKIVCHG*TIRAAA
Trigger: GGCAGCGGCTCTTATAGTGCAACCATGGCAGACTAT...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCGGGCTCTCTGCAGTaGATCTTTGAAAGCGTCGTT +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGPGSLQ*IFESVV
Trigger: AACGACGCTTTCAAAGATGCACTGCAGAGAGCCCGG...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCATCTGCCGGGCTCTCTaGAGTGCATCTTTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGICRAL*SASLKA
Trigger: CGCTTTCAAAGATGCACTGCAGAGAGCCCGGCAGAT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGACCTCCAATTTTTGCTaGAATCTGCCGGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKTSNFC*NLPGSL
Trigger: CAGAGAGCCCGGCAGATTGCAGCAAAAATTGGAGGT...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCGAGCTATCTGTATTTTaGATCCAGATTCCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLELSVF*IQIPVV
Trigger: TACAACAGGAATCTGGATGCAAAATACAGATAGCTC...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAGTCCCATGTTCCAGTTaGCTTGACCTCTACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTVPCSS*LDLYLF
Trigger: GAAGAGGTAGAGGTCAAGGCAACTGGAACATGGGAC...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCATTCTTGCACCAGACTaGTGGCTTATGCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLILAPD*WLMLFM
Trigger: CATAAAAAGCATAAGCCAGCAGTCTGGTGCAAGAAT...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATCTGCCAGTGTGGATATaGATTTCCCCATCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHLPVWI*ISPSLG
Trigger: CCCCAGGGATGGGGAAATGCATATCCACACTGGCAG...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAATTTGGATCCGTTCCTaGCTTAGCTGGATCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTIWIRS*LSWIRR
Trigger: CCTCCTGATCCAGCTAAGGCAGGAACGGATCCAAAT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGTGCTGGTGGTGGCTGTaGTTGCTGTTGATAATAGTG +
Preference number: 4 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKCWWWL*LLLIIV
Trigger: CACTATTATCAACAGCAAGCACAGCCACCACCAGCA...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCCTTTTTCAACAATCTaGTCCAGTAACCGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLPFSTI*SSNRFA
Trigger: AGCAAAACGGTTACTGGACCAGATTGTTGAAAAAGG...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGCCAACAGCAAATCTTaGAATGGGGACATCTATCCC +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAANSKS*NGDIYP
Trigger: GGGATAGATGTCCCCATTCCAAGATTTGCTGTTGGC...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGTTGTATGGTCCCATTaGAGTTCCAGGCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEVVWSH*SSRPWR
Trigger: CCTCCAGGGCCTGGAACTCCAATGGGACCATACAAC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCAGGTGCAGGGTTGTATaGTCCCATTGGAGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGRCRVV*SHWSSR
Trigger: CCTGGAACTCCAATGGGACCATACAACCCTGCACCT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATGAGGAGCCGGGCCTaGTGGTCCAGGATTATAAGG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRMRSRA*WSRIIR
Trigger: CCTTATAATCCTGGACCACCAGGCCCGGCTCCTCAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCATCAACCTGTCCAGCTaGGGCTGGATTCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGINLSS*GWILLI
Trigger: GATCAGCAGAATCCAGCCCCAGCTGGACAGGTTGAT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAGGCTGCACTATAATCTaGCTGACCACCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRGCTII*LTTWRS
Trigger: GCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCC...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCACTCCTCTGCCAATTATaGATCCAACCATTCCATCTG +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCALLCQL*IQPFHL
Trigger: CAGATGGAATGGTTGGATTCATAATTGGCAGAGGAG...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCATCATCTGGCTTAAACTaGATGCGAACACCAGCATCA +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCASSGLN*MRTPAS
Trigger: TGATGCTGGTGTTCGCATTCAGTTTAAGCCAGATGA...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCACAATCTTTTCTTCTATaGGTTGCCGAGCATAGTCTA +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISQSFLL*VAEHSL
Trigger: TAGACTATGCTCGGCAACTCATAGAAGAAAAGATTG...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCATTTTCCCCCACACAATaGAGCAAATACTGTATTGTC +
Preference number: 4 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISFSPTQ*SKYCIV
Trigger: GACAATACAGTATTTGCTTCATTGTGTGGGGGAAAA...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTCAGGATTACTTGTGCTaGAAGAGCCAATACAATAAA +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCQDYLC*KSQYNK
Trigger: TTTATTGTATTGGCTCTTTCAGCACAAGTAATCCTG...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTCCAAACCCACCCTTATaGATTAACTACCAAGATAAT +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCPNPPL*INYQDN
Trigger: ATTATCTTGGTAGTTAATTCATAAGGGTGGGTTTGG...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGAAATGCTATCACTTCTaGATGACTCCCCTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKKCYHF*MTPLSL
Trigger: GAGGGAAAGGGGAGTCATTCAGAAGTGATAGCATTT...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACACTATAAGAGCCGCTaGCGCCTGTTCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEHYKSR*RLFRDF
Trigger: GAAGTCTCTGAACAGGCGGCAGCGGCTCTTATAGTG...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATCTGCCGGGCTCTCTaGAGTGCATCTTTGAAAGCG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRICRAL*SASLKA
Trigger: CGCTTTCAAAGATGCACTGCAGAGAGCCCGGCAGAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTGCTGGTGGTGGCTGTaGTTGCTGTTGATAATAGTG +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKCWWWL*LLLIIV
Trigger: CACTATTATCAACAGCAAGCACAGCCACCACCAGCA...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAAGTCGGAGCAGGAACTaGCTGACCCATTTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAESRSRN*LTHFLV
Trigger: TACAAGAAAATGGGTCAGGCAGTTCCTGCTCCGACT...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCATACTCAGCCCAGGCTaGACTATAATCTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGILSPG*TIIWLT
Trigger: GGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTAT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTACAACGTATGGCATTTaGATTATGTGGAACATTGAC +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCTTYGI*IMWNID
Trigger: GTCAATGTTCCACATAATGCAAATGCCATACGTTGT...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTTACAATGAACTGTACTaGTATTTCCATCCTGTAGGT +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCYNELY*YFHPVG
Trigger: ACCTACAGGATGGAAATAGCAGTACAGTTCATTGTA...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAATGTTGACATCGGTCTaGAGGTCCTGTTATTTGTGC +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAMLTSV*RSCYLC
Trigger: GCACAAATAACAGGACCTCCAGACCGATGTCAACAT...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATCAACCTGTCCAGCTaGGGCTGGATTCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRINLSS*GWILLI
Trigger: GATCAGCAGAATCCAGCCCCAGCTGGACAGGTTGAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATATCAACCTGTCCAGCTaGGGCTGGATTCTGCTGATC +
Preference number: 4 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHINLSS*GWILLI
Trigger: GATCAGCAGAATCCAGCCCCAGCTGGACAGGTTGAT...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTATTCAAAACAACAAATaGTGCTCTCCACCAATGACA +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCIQNNK*CSPPMT
Trigger: TGTCATTGGTGGAGAGCACCATTTGTTGTTTTGAAT...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCATTCCGAACTTCTCTaGAACCGCCTTGATCACGAA +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGHSELL*NRLDHE
Trigger: TTCGTGATCAAGGCGGTTTCAGAGAAGTTCGGAATG...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGCCTTGTCCATTAGTTTaGGTTGTAGTTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKPCPLV*VVVGAP
Trigger: AGGTGCACCAACTACAACTCAAACTAATGGACAAGG...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCATCACCTCCAATTTTTaGTGCAATCTGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGITSNF*CNLPGS
Trigger: AGAGCCCGGCAGATTGCAGCAAAAATTGGAGGTGAT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACATCCAGGATTATAAGGTaGAGGGTTGTATGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTSRIIR*RVVWSH
Trigger: ATGGGACCATACAACCCTGCACCTTATAATCCTGGA...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCGCTTCTTGCATGATTTaGAAATCCCTGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGASCMI*KSLRCW
Trigger: CCAGCACCTCAGGGATTTGCAAATCATGCAAGAAGC...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CTATACTGGCTGGATCAAACCTGCACTTCAACAGACAATGGCAAGACAGACTGTAACACTAATATCCAATaGATTCAAATCAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: LYWLDQTCTSTDNGKTDCNTNIQ*IQINWL
Trigger: GAGCCAGTTGATTTGAATGCATTGGATATTAGTGTT...ACAGTCTGTCTTGCCATTGTCTGTTGAAGTGCAGGTTTGATCCAGCCAGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTTGAATAGTCTGCCATaGTTGCACTATAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKLNSLP*LHYKSR
Trigger: GCGGCTCTTATAGTGCAACCATGGCAGACTATTCAA...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAAACCGTTTTGCTGACTaGACAGATTCAGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTNRFAD*TDSGVP
Trigger: TGGAACACCTGAATCTGTCCAGTCAGCAAAACGGTT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCACAGCAAATCTTGGAATaGGGACATCTATCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAQQILE*GHLSLH
Trigger: ATGAAGGGATAGATGTCCCCATTCCAAGATTTGCTG...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGACTCTTCCCAAGCCTTaGTATAATCAACCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKTLPKP*YNQPVQ
Trigger: CTGGACAGGTTGATTATACCAAGGCTTGGGAAGAGT...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAATTCTGCGGCCCGTCTTaGATCATAACCATTTTAACT +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEFCGPS*IITILT
Trigger: AGTTAAAATGGTTATGATTCAAGACGGGCCGCAGAA...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAATCTCTGAAACCGCCTTaGTCACGAATTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAESLKPP*SRINSN
Trigger: GTTAGAGTTAATTCGTGATCAAGGCGGTTTCAGAGA...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCGGTGGAGGATTTCTCTaGAGTTCTATTCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGGGGFL*SSILAP
Trigger: TGGTGCAAGAATAGAACTTCAGAGAAATCCTCCACC...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAGAACACAATCAAGGATaGTACACAGCACAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSREHNQG*YTAQSS
Trigger: GGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTC...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATATCACCTCCAATTTTTaGTGCAATCTGCCGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHITSNF*CNLPGS
Trigger: AGAGCCCGGCAGATTGCAGCAAAAATTGGAGGTGAT...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCAGATTCCTGTTGTATaGGTGAGATCTGTTCACCTC +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGQIPVV*VRSVHL
Trigger: GAGGTGAACAGATCTCACGCATACAACAGGAATCTG...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAAGGTCCTGTTATTTGTaGTATCCTTTCGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAERSCYL*YPFGCC
Trigger: ACAACACCCGAAAGGATAGCACAAATAACAGGACCT...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCATGGTGGTGGCTTCTTaGATGATTTGCAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGMVVAS*MICKSL
Trigger: CAGGGATTTGCAAATCATGCAAGAAGCCACCACCAT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCACCTTTTTCAACAATCTaGTCCAGTAACCGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAPFSTI*SSNRFA
Trigger: AGCAAAACGGTTACTGGACCAGATTGTTGAAAAAGG...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAATGGAAGCCAGGAGCTaGTCTTCCTTTTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEMEARS*SSFFNN
Trigger: ATTGTTGAAAAAGGAAGACCAGCTCCTGGCTTCCAT...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAGCCAACAGCAAATCTTaGAATGGGGACATCTATCCC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRANSKS*NGDIYP
Trigger: GGGATAGATGTCCCCATTCCAAGATTTGCTGTTGGC...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAATGTTGTCCCATCATCTaGCTTAAACTGAATGCGAAC +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAECCPII*LKLNAN
Trigger: GTTCGCATTCAGTTTAAGCCAGATGATGGGACAACA...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACACTTGCACCAGACTGCTaGCTTATGCTTTTTATGGTT +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTLAPDC*LMLFMV
Trigger: AACCATAAAAAGCATAAGCCAGCAGTCTGGTGCAAG...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAATTAGGATCTGCATTTaGTGGAGGATTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAIRICI*WRISLK
Trigger: CTTCAGAGAAATCCTCCACCAAATGCAGATCCTAAT...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACATTCTTAGCATCTGGTTaGTCTCCATCTTCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTFLASG*SPSSKG
Trigger: ACCTTTAGAAGATGGAGATCAACCAGATGCTAAGAA...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAACCAAAAGAGTCATTTTaGGGAGCAACTTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEPKESF*GATFLA
Trigger: TGCTAAGAAAGTTGCTCCTCAAAATGACTCTTTTGG...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGACTCCTCTGCCAATTATaGATCCAACCATTCCATCTG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRLLCQL*IQPFHL
Trigger: CAGATGGAATGGTTGGATTCATAATTGGCAGAGGAG...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGGTGGAGGATTTCTCTaGAGTTCTATTCTTGCACCA +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEGGGFL*SSILAP
Trigger: TGGTGCAAGAATAGAACTTCAGAGAAATCCTCCACC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAACAATCTTTTCTTCTATaGGTTGCCGAGCATAGTCTA +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEQSFLL*VAEHSL
Trigger: TAGACTATGCTCGGCAACTCATAGAAGAAAAGATTG...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTTGTCCATTAGTTTaGGTTGTAGTTGGTGCACCT +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEPCPLV*VVVGAP
Trigger: AGGTGCACCAACTACAACTCAAACTAATGGACAAGG...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTTTTCCCCCACACAATaGAGCAAATACTGTATTGTC +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKFSPTQ*SKYCIV
Trigger: GACAATACAGTATTTGCTTCATTGTGTGGGGGAAAA...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAGCTATCTGTATTTTaGATCCAGATTCCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAELSVF*IQIPVV
Trigger: TACAACAGGAATCTGGATGCAAAATACAGATAGCTC...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAATTCTTGCACCAGACTaGTGGCTTATGCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEILAPD*WLMLFM
Trigger: CATAAAAAGCATAAGCCAGCAGTCTGGTGCAAGAAT...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCTGAAGTTCTATTCTTaGACCAGACTGCTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGLKFYS*TRLLAY
Trigger: ATAAGCCAGCAGTCTGGTGCAAGAATAGAACTTCAG...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACACTGGGCATAATAGGCTaGTTGTTGTCTATAATACTC +
Preference number: 4 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTLGIIG*LLSIIL
Trigger: GAGTATTATAGACAACAAGCAGCCTATTATGCCCAG...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGGAAGGCAAGTGCAATaGTCCTTGAAGGAACACAAT +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEGRQVQ*SLKEHN
Trigger: ATTGTGTTCCTTCAAGGAGCATTGCACTTGCCTTCC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR GCA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATGTTGTGCTTACCTGGTaGTTTTTGCAGCAGAACCTA +
Preference number: 4 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHVVLTW*FLQQNL
Trigger: TAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAAC...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATGTTGACATCGGTCTaGAGGTCCTGTTATTTGTGC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRMLTSV*RSCYLC
Trigger: GCACAAATAACAGGACCTCCAGACCGATGTCAACAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGAGCTAGTTCTATACTaGCTGGATCAAACCTGCACT +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEELVLY*LDQTCT
Trigger: AGTGCAGGTTTGATCCAGCCAGTATAGAACTAGCTC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCATTTCCTTGGCTTGTTaGACTTTATATGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGISLAC*TLYGSP
Trigger: AGGAGACCCATATAAAGTTCAACAAGCCAAGGAAAT...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATCTCTGAAACCGCCTTaGTCACGAATTAACTCTAAC +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAESLKPP*SRINSN
Trigger: GTTAGAGTTAATTCGTGATCAAGGCGGTTTCAGAGA...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR TCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGATTTTACCTTCTACATTaGGCCCTTCTATGGTCCATG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRFYLLH*ALLWSM
Trigger: CATGGACCATAGAAGGGCTCAATGTAGAAGGTAAAA...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR GCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGGTCCTGTTATTTGTaGTATCCTTTCGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRRSCYL*YPFGCC
Trigger: ACAACACCCGAAAGGATAGCACAAATAACAGGACCT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGATATGTCCTTAGGTTGTaGTTACCTGGTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRYVLRL*LPGAFC
Trigger: GCAAAAAGCACCAGGTAAGCACAACCTAAGGACATA...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTCCAACCATTCCATCTaGAACTTTGTATTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKSNHSI*NFVFFC
Trigger: ACAGAAGAATACAAAGTTCCAGATGGAATGGTTGGA...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATGGAAGCCAGGAGCTaGTCTTCCTTTTTCAACAAT +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRMEARS*SSFFNN
Trigger: ATTGTTGAAAAAGGAAGACCAGCTCCTGGCTTCCAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGTTGTTGAACTTTATATaGGTCTCCTGTAATCCTAAG +
Preference number: 4 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKLLNFI*VSCNPK
Trigger: CTTAGGATTACAGGAGACCCATATAAAGTTCAACAA...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCACTAACACCATTTCCTTaGCTTGTTGAACTTTATATG +
Preference number: 4 (lower is better)
Translates to: PHNEANTVLSTSYYWPCALTPFP*LVELYM
Trigger: CATATAAAGTTCAACAAGCCAAGGAAATGGTGTTAG...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGATTCTTAGCATCTGGTTaGTCTCCATCTTCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRFLASG*SPSSKG
Trigger: ACCTTTAGAAGATGGAGATCAACCAGATGCTAAGAA...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGACTGGGCATAATAGGCTaGTTGTTGTCTATAATACTC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRLGIIG*LLSIIL
Trigger: GAGTATTATAGACAACAAGCAGCCTATTATGCCCAG...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR GCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGACTGGCTCACCTTTTCTaGTTTCCATTTATTTCAGAC +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRLAHLF*FPFISD
Trigger: GTCTGAAATAAATGGAAAGCAGAAAAGGTGAGCCAG...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGACCTTTTTCAACAATCTaGTCCAGTAACCGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRPFSTI*SSNRFA
Trigger: AGCAAAACGGTTACTGGACCAGATTGTTGAAAAAGG...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAATGCAAATACATTTGCTaGAATGTGTACATCTACACT +
Preference number: 4 (lower is better)
Translates to: HNEANTVLSTSYYWPCAECKYIC*NVYIYT
Trigger: AGTGTAGATGTACACATTCCAGCAAATGTATTTGCA...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR TCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAAATCCCCTTCTGTCTaGTACATTTCAAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRKSPSV*YISRLS
Trigger: TGAAAGTCTTGAAATGTATCAGACAGAAGGGGATTT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR TCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGCTCTCAAGTTTCAATaGGCCCCTTTATATTATCAA +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEALKFQ*APLYYQ
Trigger: TTGATAATATAAAGGGGCTCATTGAAACTTGAGAGC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCTTGTTGAACTTTATATaGGTCTCCTGTAATCCTAAG +
Preference number: 4 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGLLNFI*VSCNPK
Trigger: CTTAGGATTACAGGAGACCCATATAAAGTTCAACAA...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR GCA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAACATTGCTCATTATTTaGAAACTGAAATCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAETLLII*KLKSPS
Trigger: AGAAGGGGATTTCAGTTTGCAAATAATGAGCAATGT...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGATTGTTGAACTTTATATaGGTCTCCTGTAATCCTAAG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRLLNFI*VSCNPK
Trigger: CTTAGGATTACAGGAGACCCATATAAAGTTCAACAA...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGACTAACACCATTTCCTTaGCTTGTTGAACTTTATATG +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRLTPFP*LVELYM
Trigger: CATATAAAGTTCAACAAGCCAAGGAAATGGTGTTAG...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CCA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGATCACTGTTAATGCAATaGAAGTATGCCAAAAGATCA +
Preference number: 4 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRSLLMQ*KYAKRS
Trigger: TGATCTTTTGGCATACTTCCATTGCATTAACAGTGA...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CCA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATATTAAGAGGCAGTTATaGTTTTCCAAGATATCAGCA +
Preference number: 4 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHIKRQL*FSKISA
Trigger: TGCTGATATCTTGGAAAACCATAACTGCCTCTTAAT...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS GCA 90 bp TGGAGGACCATGAGGAGCCGGGCCTGGTGGTCCAGGATTATAAGGTaGAGGGTTGTATGGTCCCATTGGAGTTCCAGGCCCTGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: WRTMRSRAWWSRIIR*RVVWSHWSSRPWRP
Trigger: GGGCCTCCAGGGCCTGGAACTCCAATGGGACCATACAACCCTGCACCTTATAATCCTGGACCACCAGGCCCGGCTCCTCATGGTCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 90 bp AGGAGCCGGGCCTGGTGGTCCAGGATTATAAGGTGCAGGGTTGTATaGTCCCATTGGAGTTCCAGGCCCTGGAGGCCCAGGAGGTCCATG +
Preference number: 5 (lower is better)
Translates to: RSRAWWSRIIRCRVV*SHWSSRPWRPRRSM
Trigger: CATGGACCTCCTGGGCCTCCAGGGCCTGGAACTCCAATGGGACCATACAACCCTGCACCTTATAATCCTGGACCACCAGGCCCGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS GCA 90 bp TTTGGATCCGTTCCTGCCTTAGCTGGATCAGGAGGAGCCTGCTGCTaGCAGTGTGGATATGCATTTCCCCATCCCTGGGGAGCATATGGG +
Preference number: 5 (lower is better)
Translates to: FGSVPALAGSGGACC*QCGYAFPHPWGAYG
Trigger: CCCATATGCTCCCCAGGGATGGGGAAATGCATATCCACACTGGCAGCAGCAGGCTCCTCCTGATCCAGCTAAGGCAGGAACGGATCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 90 bp GGCTGCTTGTTGTCTATAATACTCAGCCCAGGCTGCACTATAATCTaGCTGACCACCTGGAGGAGCCCCAGTCGGAGCAGGAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: GCLLSIILSPGCTII*LTTWRSPSRSRNCL
Trigger: CAGGCAGTTCCTGCTCCGACTGGGGCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTATTATAGACAACAAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000492405.5
ENST00000492724.1
CDS-3UTR CAA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCGGTTGTATGGTCCCATaGGAGTTCCAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGGCMVP*EFQALE
Trigger: CTCCAGGGCCTGGAACTCCAATGGGACCATACAACC...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS GCA 90 bp CTGGGCATAATAGGCTGCTTGTTGTCTATAATACTCAGCCCAGGCTaGACTATAATCTGGCTGACCACCTGGAGGAGCCCCAGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: LGIIGCLLSIILSPG*TIIWLTTWRSPSRS
Trigger: GCTCCGACTGGGGCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000492405.5
ENST00000492724.1
CDS GCA 90 bp TTGAGTTGTAGTTGGTGCACCTGCAGGGGCTGCTGGTGGTGGCTGTaGTTGCTGTTGATAATAGTGAGCGTAATAAGCAGCCCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSCSWCTCRGCWWWL*LLLIIVSVISSPSC
Trigger: GCAGCTTGGGCTGCTTATTACGCTCACTATTATCAACAGCAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCACCAACTACAACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 90 bp TCTATAATACTCAGCCCAGGCTGCACTATAATCTGGCTGACCACCTaGAGGAGCCCCAGTCGGAGCAGGAACTGCCTGACCCATTTTCTT +
Preference number: 5 (lower is better)
Translates to: SIILSPGCTIIWLTT*RSPSRSRNCLTHFL
Trigger: AAGAAAATGGGTCAGGCAGTTCCTGCTCCGACTGGGGCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTATTATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000492405.5
ENST00000492724.1
CDS-3UTR CAA 90 bp GCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTGAAGGAAGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTG +
Preference number: 5 (lower is better)
Translates to: AEPKVEGLGRQVQCSLKEAFPGD*SGHNRL
Trigger: CAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGC...TTCCTTCAAGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAATAGTCTGCCATGGTaGCACTATAAGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGNSLPW*HYKSRC
Trigger: GCAGCGGCTCTTATAGTGCAACCATGGCAGACTATT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp CTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCAATAGTCTGCCATGGTaGCACTATAAGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LFAAEPKVEGLGRQVQCSNSLPW*HYKSRC
Trigger: GCAGCGGCTCTTATAGTGCAACCATGGCAGACTATT...GGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTG +
Preference number: 5 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTAFPGD*SGHNRL
Trigger: CAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGC...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp GCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTGAAGGAACTTACCTGGTGCTTTTaGCAGCAGAACCTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: AEPKVEGLGRQVQCSLKELTWCF*QQNLRW
Trigger: CCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG...TTCCTTCAAGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS TCA 90 bp TGCTTGCTGTTGATAATAGTGAGCGTAATAAGCAGCCCAAGCTGCTaGATTTGGATCCGTTCCTGCCTTAGCTGGATCAGGAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: CLLLIIVSVISSPSC*IWIRSCLSWIRRSL
Trigger: CAGGCTCCTCCTGATCCAGCTAAGGCAGGAACGGATCCAAATTCAGCAGCTTGGGCTGCTTATTACGCTCACTATTATCAACAGCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS GCA 90 bp AGGATGCTGTGGCATTCCCTGGGGACTTGTCTGGGCATAATAGGCTaGTTGTTGTCTATAATACTCAGCCCAGGCTGCACTATAATCTGG +
Preference number: 5 (lower is better)
Translates to: RMLWHSLGTCLGIIG*LLSIILSPGCTIIW
Trigger: CCAGATTATAGTGCAGCCTGGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000488814.5
ENST00000492405.5
ENST00000492724.1
CDS-3UTR CAA 90 bp TACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCTCTGCAGTGCATCTTaGAAAGCGTCGTTAACTCCT +
Preference number: 5 (lower is better)
Translates to: YLVLFAAEPKVEGLGRQVLCSAS*KASLTP
Trigger: AGGAGTTAACGACGCTTTCAAAGATGCACTGCAGAG...CACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp CTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGTCATTACAGATCTTaGCTGCTGATGCATCGGTGG +
Preference number: 5 (lower is better)
Translates to: LVLFAAEPKVEGLGRQVQCHYRS*LLMHRW
Trigger: CCACCGATGCATCAGCAGCAAAGATCTGTAATGACA...TTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp CTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTGGAGGTCCTGTTATTaGTGCTATCCTTTCGGGTGT +
Preference number: 5 (lower is better)
Translates to: LFAAEPKVEGLGRQVQCSWRSCY*CYPFGC
Trigger: ACACCCGAAAGGATAGCACAAATAACAGGACCTCCA...GGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTAATTTCTGCAGCATGTaGACATCGGTCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPNFCSM*TSVWRS
Trigger: GGACCTCCAGACCGATGTCAACATGCTGCAGAAATT...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCCATGTTCCAGTTGCCTaGACCTCTACCTCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLHVPVA*TSTSSS
Trigger: CGAGGAAGAGGTAGAGGTCAAGGCAACTGGAACATG...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCGTCCACTTCTTATTATaGGCCCTGAGGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLVHFLL*ALRCWR
Trigger: CCTCCAGCACCTCAGGGCCAATAATAAGAAGTGGAC...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGGCTATGATTTGGTGCTaGCAGCATCTTCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRAMIWC*QHLQHC
Trigger: ACAGTGCTGAAGATGCTGCAAGCACCAAATCATAGC...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS GCA 90 bp TCCTTGTCCATTAGTTTGAGTTGTAGTTGGTGCACCTGCAGGGGCTaGTGGTGGTGGCTGTGCTTGCTGTTGATAATAGTGAGCGTAATA +
Preference number: 5 (lower is better)
Translates to: SLSISLSCSWCTCRG*WWWLCLLLIIVSVI
Trigger: TATTACGCTCACTATTATCAACAGCAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCACCAACTACAACTCAAACTAATGGACAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 90 bp TTGTCCATTAGTTTGAGTTGTAGTTGGTGCACCTGCAGGGGCTGCTaGTGGTGGCTGTGCTTGCTGTTGATAATAGTGAGCGTAATAAGC +
Preference number: 5 (lower is better)
Translates to: LSISLSCSWCTCRGC*WWLCLLLIIVSVIS
Trigger: GCTTATTACGCTCACTATTATCAACAGCAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCACCAACTACAACTCAAACTAATGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS-3UTR CAA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCGGAGCTATCTGTATTTaGCATCCAGATTCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGGAICI*HPDSCC
Trigger: ACAACAGGAATCTGGATGCAAAATACAGATAGCTCC...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTGCCAACAGCAAATCTaGGAATGGGGACATCTATCC +
Preference number: 5 (lower is better)
Translates to: FLQQNLRWKVWEGKCNAPCQQQI*EWGHLS
Trigger: GGATAGATGTCCCCATTCCAAGATTTGCTGTTGGCA...AGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCTGGAGGTCCTGTTATTaGTGCTATCCTTTCGGGTGT +
Preference number: 5 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLWRSCY*CYPFGC
Trigger: ACACCCGAAAGGATAGCACAAATAACAGGACCTCCA...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp ATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACCAATTTCTGCAGCATGTaGACATCGGTCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: MLLEGTQSRMIHSTVLLTNFCSM*TSVWRS
Trigger: GGACCTCCAGACCGATGTCAACATGCTGCAGAAATT...GGTGAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTTGGTGGTGGCTGTGCTaGCTGTTGATAATAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGWWWLC*LLIIVS
Trigger: GCTCACTATTATCAACAGCAAGCACAGCCACCACCA...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGTCCTTGTCCATTAGTTaGAGTTGTAGTTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: YLVLFAAEPKVEGLGRQVSLSIS*SCSWCT
Trigger: GGTGCACCAACTACAACTCAAACTAATGGACAAGGA...CACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCGGTCCAGTAACCGTTTaGCTGACTGGACAGATTCAG +
Preference number: 5 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLGPVTV*LTGQIQ
Trigger: CTGAATCTGTCCAGTCAGCAAAACGGTTACTGGACC...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp CTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCCATTTCCTTGGCTTGTaGAACTTTATATGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LFAAEPKVEGLGRQVQCSHFLGL*NFIWVS
Trigger: GGAGACCCATATAAAGTTCAACAAGCCAAGGAAATG...GGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCACATGTTCCAGTTGCCTaGACCTCTACCTCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISHVPVA*TSTSSS
Trigger: CGAGGAAGAGGTAGAGGTCAAGGCAACTGGAACATG...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp GCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTGAAGGAATGGCTGTGCTTGCTGTaGATAATAGTGAGCGTAATA +
Preference number: 5 (lower is better)
Translates to: AEPKVEGLGRQVQCSLKEWLCLL*IIVSVI
Trigger: TATTACGCTCACTATTATCAACAGCAAGCACAGCCA...TTCCTTCAAGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp TGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATCAAGTGCAATGCTCCTaGAAGGAACACAATCAAGGA +
Preference number: 5 (lower is better)
Translates to: WCFLQQNLRWKVWEGKCNQVQCS*KEHNQG
Trigger: TCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTTG...ATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTTACCTGGTGCTTTTaGCAGCAGAACCTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLLTWCF*QQNLRW
Trigger: CCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAG...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp GTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGCATATATGTCCTTAGGTaGTGCTTACCTGGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VLTWCFLQQNLRWKVWEGIYVLR*CLPGAF
Trigger: AAAAGCACCAGGTAAGCACAACCTAAGGACATATAT...GCCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS CCA 90 bp AACAAATTAGCAATTACATTATACCTGAGGTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGTCTGGGCATAATAGGCTGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: NKLAITLYLRCWRML*HSLGTCLGIIGCLL
Trigger: CAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGTATAATGTAATTGCTAATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487684.1
CDS-3UTR CAA 90 bp GCAGAACCTAAGGTGGAAGGTCTGGGAAGGCAAGTGCAATGCTCCTTGAAGGAACATAACCATAGTCATTaGAATTCAGTGATGTCCCTG +
Preference number: 5 (lower is better)
Translates to: AEPKVEGLGRQVQCSLKEHNHSH*NSVMSL
Trigger: CAGGGACATCACTGAATTCAAATGACTATGGTTATG...TTCCTTCAAGGAGCATTGCACTTGCCTTCCCAGACCTTCCACCTTAGGTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294623.8
CDS-3UTR CAA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAGGTTGTATGGTCCCATaGGAGTTCCAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTGCMVP*EFQALE
Trigger: CTCCAGGGCCTGGAACTCCAATGGGACCATACAACC...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTTCCTTGTCCATTAGTTaGAGTTGTAGTTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGSLSIS*SCSWCT
Trigger: GGTGCACCAACTACAACTCAAACTAATGGACAAGGA...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTCTGGGAAGGATATATGTCCTTAGGTaGTGCTTACCTGGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CAYLVLFAAEPKVEGLGRIYVLR*CLPGAF
Trigger: AAAAGCACCAGGTAAGCACAACCTAAGGACATATAT...CCTTCCCAGACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCACATTACAGATCTGCTTaGCTGCTGATGCATCGGTGG +
Preference number: 5 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISHYRSA*LLMHRW
Trigger: CCACCGATGCATCAGCAGCAAAGCAGATCTGTAATG...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCACAGTGCAATGCTCCTaGAAGGAACACAATCAAGGA +
Preference number: 5 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLTVQCS*KEHNQG
Trigger: TCCTTGATTGTGTTCCTTCAAGGAGCATTGCACTGT...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS GCA 90 bp TTACACACGGGTAGTTTCTTCTACATTGAGCCCTTCTATGGTCCATaGTCATCGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: LHTGSFFYIEPFYGP*SSAHQWHTLKGFLF
Trigger: AAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTAGAAGAAACTACCCGTGTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000474632.5
ENST00000483894.5
ENST00000488814.5
ENST00000489495.5
ENST00000492405.5
ENST00000492724.1
CDS GCA 90 bp ACTGGAGTAGAAATCAACAAATTAGCAATTACATTATACCTGAGGTaGTGGAGGATGCTGTGGCATTCCCTGGGGACTTGTCTGGGCATA +
Preference number: 5 (lower is better)
Translates to: TGVEINKLAITLYLR*WRMLWHSLGTCLGI
Trigger: TATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGTATAATGTAATTGCTAATTTGTTGATTTCTACTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487684.1
CDS-3UTR CAA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCGGAGCTATCTGTATTTaGCATCCAGATTCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLGAICI*HPDSCC
Trigger: ACAACAGGAATCTGGATGCAAAATACAGATAGCTCC...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp GCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCCTCATGACTAATCCTGCCTaGCTAGCTGGAATCATGATT +
Preference number: 5 (lower is better)
Translates to: AMLLEGTQSRMIHSTVLLMTNPA*LAGIMI
Trigger: AATCATGATTCCAGCTAGCAAGGCAGGATTAGTCAT...GAGGAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCGTTCTGCGGCCCGTCTaGAATCATAACCATTTTAAC +
Preference number: 5 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLVLRPV*NHNHFN
Trigger: GTTAAAATGGTTATGATTCAAGACGGGCCGCAGAAC...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAGTAATCCTAAGAGGTTaGTCAGCACCAGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISVILRG*SAPVFC
Trigger: GCAGAACACTGGTGCTGACAAACCTCTTAGGATTAC...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCACATGTTCCAGTTGCCTaGACCTCTACCTCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAHVPVA*TSTSSS
Trigger: CGAGGAAGAGGTAGAGGTCAAGGCAACTGGAACATG...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCTCTGAAGTTCTATTCTaGCACCAGACTGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLSEVLF*HQTAGL
Trigger: TAAGCCAGCAGTCTGGTGCAAGAATAGAACTTCAGA...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTTGGCTGTGCTTGCTGTaGATAATAGTGAGCGTAATA +
Preference number: 5 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGWLCLL*IIVSVI
Trigger: TATTACGCTCACTATTATCAACAGCAAGCACAGCCA...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTG +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEAFPGD*SGHNRL
Trigger: CAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGC...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCTTTATGAGCTATGATTaGGTGCTTGCAGCATCTTCA +
Preference number: 5 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLFMSYD*VLAASS
Trigger: TGAAGATGCTGCAAGCACCAAATCATAGCTCATAAA...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp TACATTGAGCCCTTCTATGGTCCATGCTCATCGGCTCACCAATGGCATACACTCATTTTACCTTCTACATaGAGCCCTTCTATGGTCCAT +
Preference number: 5 (lower is better)
Translates to: YIEPFYGPCSSAHQWHTLILPST*SPSMVH
Trigger: ATGGACCATAGAAGGGCTCAATGTAGAAGGTAAAAT...GAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCAGTTCTGCGGCCCGTCTaGAATCATAACCATTTTAAC +
Preference number: 5 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISVLRPV*NHNHFN
Trigger: GTTAAAATGGTTATGATTCAAGACGGGCCGCAGAAC...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGGTTGTATGGTCCCATaGGAGTTCCAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEGCMVP*EFQALE
Trigger: CTCCAGGGCCTGGAACTCCAATGGGACCATACAACC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGGTGGAAGGTATAATAGGCTGCTTGTaGTCTATAATACTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: SLGCAYLVLFAAEPKVEGIIGCL*SIILSP
Trigger: TGGGCTGAGTATTATAGACAACAAGCAGCCTATTAT...ACCTTCCACCTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS GCA 90 bp AGGATTACCAGCCTGAACACTTCGAAGAAGGTCTGTAATAATTTCTaGAGCATGTTGACATCGGTCTGGAGGTCCTGTTATTTGTGCTAT +
Preference number: 5 (lower is better)
Translates to: RITSLNTSKKVCNNF*SMLTSVWRSCYLCY
Trigger: ATAGCACAAATAACAGGACCTCCAGACCGATGTCAACATGCTGCAGAAATTATTACAGACCTTCTTCGAAGTGTTCAGGCTGGTAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAAATAGTCTGCCATGGTaGCACTATAAGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAENSLPW*HYKSRC
Trigger: GCAGCGGCTCTTATAGTGCAACCATGGCAGACTATT...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCATGGAGGTCCTGTTATTaGTGCTATCCTTTCGGGTGT +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAWRSCY*CYPFGC
Trigger: ACACCCGAAAGGATAGCACAAATAACAGGACCTCCA...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAAATTTCTGCAGCATGTaGACATCGGTCTGGAGGTCC +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAENFCSM*TSVWRS
Trigger: GGACCTCCAGACCGATGTCAACATGCTGCAGAAATT...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAATGGTGGTGGCTGTGCTaGCTGTTGATAATAGTGAGC +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEWWWLC*LLIIVS
Trigger: GCTCACTATTATCAACAGCAAGCACAGCCACCACCA...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp AGTGCAATGCTCCTTGAAGGAACACAATCAAGGATGATACACAGCACAGTCCTCATTCTGCTGATCTCCTaGTCCATTAGTTTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: SAMLLEGTQSRMIHSTVLILLIS*SISLSC
Trigger: ACAACTCAAACTAATGGACAAGGAGATCAGCAGAAT...GAGGACTGTGCTGTGTATCATCCTTGATTGTGTTCCTTCAAGGAGCATTGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGCATTACAGATCTGCTTaGCTGCTGATGCATCGGTGG +
Preference number: 5 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKHYRSA*LLMHRW
Trigger: CCACCGATGCATCAGCAGCAAAGCAGATCTGTAATG...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAGGCTTCTTGCATGATTaGCAAATCCCTGAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTGFLHD*QIPEVL
Trigger: CAGCACCTCAGGGATTTGCAAATCATGCAAGAAGCC...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCATCCAAAAGAGTCATTTaGAGGAGCAACTTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISSKRVI*RSNFLS
Trigger: GCTAAGAAAGTTGCTCCTCAAAATGACTCTTTTGGA...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCGGTCCAGTAACCGTTTaGCTGACTGGACAGATTCAG +
Preference number: 5 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGGPVTV*LTGQIQ
Trigger: CTGAATCTGTCCAGTCAGCAAAACGGTTACTGGACC...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCATGGAATCATGATTTCTaGAACTGCATTTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAWNHDF*NCISRS
Trigger: GGACCGGGAAATGCAGTTCAAGAAATCATGATTCCA...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTAATCCTAAGAGGTTaGTCAGCACCAGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEVILRG*SAPVFC
Trigger: GCAGAACACTGGTGCTGACAAACCTCTTAGGATTAC...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTGCCAACAGCAAATCTaGGAATGGGGACATCTATCC +
Preference number: 5 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKCQQQI*EWGHLS
Trigger: GGATAGATGTCCCCATTCCAAGATTTGCTGTTGGCA...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGTCTGAAGTTCTATTCTaGCACCAGACTGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKSEVLF*HQTAGL
Trigger: TAAGCCAGCAGTCTGGTGCAAGAATAGAACTTCAGA...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGAGCATAGTCTATCTGTaGTGGAGTGCCACGAATTGT +
Preference number: 5 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKSIVYL*WSATNC
Trigger: ACAATTCGTGGCACTCCACAACAGATAGACTATGCT...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAAGCATAGTCTATCTGTaGTGGAGTGCCACGAATTGT +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCASIVYL*WSATNC
Trigger: ACAATTCGTGGCACTCCACAACAGATAGACTATGCT...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CGGCTCACCAATGGCATACACTCAAAGGATTCCTCTTTATGGGTAACTATCTCATGCAAAATACTGCAATaGTTCACGTCAATACCCTAC +
Preference number: 5 (lower is better)
Translates to: RLTNGIHSKDSSLWVTISCKILQ*FTSIPY
Trigger: GTAGGGTATTGACGTGAACAATTGCAGTATTTTGCA...TGAGATAGTTACCCATAAAGAGGAATCCTTTGAGTGTATGCCATTGGTGAGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCTCTGCAGTGCATCTTaGAAAGCGTCGTTAACTCCT +
Preference number: 5 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGLCSAS*KASLTP
Trigger: AGGAGTTAACGACGCTTTCAAAGATGCACTGCAGAG...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGGTCCAGTAACCGTTTaGCTGACTGGACAGATTCAG +
Preference number: 5 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEGPVTV*LTGQIQ
Trigger: CTGAATCTGTCCAGTCAGCAAAACGGTTACTGGACC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGATGACTAATCCTGCCTaGCTAGCTGGAATCATGATT +
Preference number: 5 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKMTNPA*LAGIMI
Trigger: AATCATGATTCCAGCTAGCAAGGCAGGATTAGTCAT...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGCATTTCCTTGGCTTGTaGAACTTTATATGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKHFLGL*NFIWVS
Trigger: GGAGACCCATATAAAGTTCAACAAGCCAAGGAAATG...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCACATTTCCTCCTATTCTaGACCCATACTCATTCCGAA +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAHFLLF*THTHSE
Trigger: TTCGGAATGAGTATGGGTCAAGAATAGGAGGAAATG...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAATCTGAAGTTCTATTCTaGCACCAGACTGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAESEVLF*HQTAGL
Trigger: TAAGCCAGCAGTCTGGTGCAAGAATAGAACTTCAGA...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCATGGCTGTGCTTGCTGTaGATAATAGTGAGCGTAATA +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAWLCLL*IIVSVI
Trigger: TATTACGCTCACTATTATCAACAGCAAGCACAGCCA...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGATGGTGGTGGCTGTGCTaGCTGTTGATAATAGTGAGC +
Preference number: 5 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRWWWLC*LLIIVS
Trigger: GCTCACTATTATCAACAGCAAGCACAGCCACCACCA...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp ACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTCCTTGTCCATTAGTTaGAGTTGTAGTTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: TMKQILYCPLLIIGPVQKSLSIS*SCSWCT
Trigger: GGTGCACCAACTACAACTCAAACTAATGGACAAGGA...CTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAAATGGTGGTGGCTTCTaGCATGATTTGCAAATCCCT +
Preference number: 5 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTNGGGF*HDLQIP
Trigger: AGGGATTTGCAAATCATGCAAGAAGCCACCACCATT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGTCCACTTCTTATTATaGGCCCTGTGCAGAAGAGAT +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEVHFLL*ALCRRD
Trigger: ATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGAC...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAACCTAAGCATAACCATAGTCATTaGAATTCAGTGATGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LYMSLGCAYLVLFAAEPKHNHSH*NSVMSL
Trigger: CAGGGACATCACTGAATTCAAATGACTATGGTTATG...CTTAGGTTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACAATGACTAATCCTGCCTaGCTAGCTGGAATCATGATT +
Preference number: 5 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTMTNPA*LAGIMI
Trigger: AATCATGATTCCAGCTAGCAAGGCAGGATTAGTCAT...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCGTTCTGCGGCCCGTCTaGAATCATAACCATTTTAAC +
Preference number: 5 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGVLRPV*NHNHFN
Trigger: GTTAAAATGGTTATGATTCAAGACGGGCCGCAGAAC...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGTAATCCTAAGAGGTTaGTCAGCACCAGTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAEVILRG*SAPVFC
Trigger: GCAGAACACTGGTGCTGACAAACCTCTTAGGATTAC...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACACATTTCCTTGGCTTGTaGAACTTTATATGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTHFLGL*NFIWVS
Trigger: GGAGACCCATATAAAGTTCAACAAGCCAAGGAAATG...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATTGCCAACAGCAAATCTaGGAATGGGGACATCTATCC +
Preference number: 5 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHCQQQI*EWGHLS
Trigger: GGATAGATGTCCCCATTCCAAGATTTGCTGTTGGCA...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAATTCTGCTGATCTCCTaGTCCATTAGTTTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAILLIS*SISLSC
Trigger: ACAACTCAAACTAATGGACAAGGAGATCAGCAGAAT...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAATAATAGGCTGCTTGTaGTCTATAATACTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: PHNEANTVLSTSYYWPCAIIGCL*SIILSP
Trigger: TGGGCTGAGTATTATAGACAACAAGCAGCCTATTAT...TGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp CACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAACATAACCATAGTCATTaGAATTCAGTGATGTCCCTG +
Preference number: 5 (lower is better)
Translates to: HNEANTVLSTSYYWPCAEHNHSH*NSVMSL
Trigger: CAGGGACATCACTGAATTCAAATGACTATGGTTATG...TTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp AGCAAATACTGTATTGTCCACTTCTTATTATTGGCCCTGTGCAGAAGAGATACATCCAAAAGAGTCATTTaGAGGAGCAACTTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: SKYCIVHFLLLALCRRDTSKRVI*RSNFLS
Trigger: GCTAAGAAAGTTGCTCCTCAAAATGACTCTTTTGGA...TGTATCTCTTCTGCACAGGGCCAATAATAAGAAGTGGACAATACAGTATTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TTTTTCCCCCACACAATGAAGCAAATACTGTATTGTCCACTTCTTATTATTGGCGGAGCTATCTGTATTTaGCATCCAGATTCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: FFPHTMKQILYCPLLIIGGAICI*HPDSCC
Trigger: ACAACAGGAATCTGGATGCAAAATACAGATAGCTCC...GCCAATAATAAGAAGTGGACAATACAGTATTTGCTTCATTGTGTGGGGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS-3UTR CAA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGATGGAATCATGATTTCTaGAACTGCATTTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRWNHDF*NCISRS
Trigger: GGACCGGGAAATGCAGTTCAAGAAATCATGATTCCA...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp GGCTCTCAAGTTTCAATGAGCCCCTTTATATTATCAATTGTACATACCTATCATTGGAATCATGATTTCTaGAACTGCATTTCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: GSQVSMSPFILSIVHTYHWNHDF*NCISRS
Trigger: GGACCGGGAAATGCAGTTCAAGAAATCATGATTCCA...ATGATAGGTATGTACAATTGATAATATAAAGGGGCTCATTGAAACTTGAGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS-3UTR CAA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAAGCATAGTCTATCTGTaGTGGAGTGCCACGAATTGT +
Preference number: 5 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRSIVYL*WSATNC
Trigger: ACAATTCGTGGCACTCCACAACAGATAGACTATGCT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGACATTTCCTCCTATTCTaGACCCATACTCATTCCGAA +
Preference number: 5 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRHFLLF*THTHSE
Trigger: TTCGGAATGAGTATGGGTCAAGAATAGGAGGAAATG...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp ATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATCCAAAAGAGTCATTTaGAGGAGCAACTTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: IYLYMSLGCAYLVLFAAESKRVI*RSNFLS
Trigger: GCTAAGAAAGTTGCTCCTCAAAATGACTCTTTTGGA...TTCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATTCTGCTGATCTCCTaGTCCATTAGTTTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRILLIS*SISLSC
Trigger: ACAACTCAAACTAATGGACAAGGAGATCAGCAGAAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS-3UTR CAA 90 bp TATTTATTTATATATGTCCTTAGGTTGTGCTTACCTGGTGCTTTTTGCAGCAGAATAATAGGCTGCTTGTaGTCTATAATACTCAGCCCA +
Preference number: 5 (lower is better)
Translates to: YLFIYVLRLCLPGAFCSRIIGCL*SIILSP
Trigger: TGGGCTGAGTATTATAGACAACAAGCAGCCTATTAT...TCTGCTGCAAAAAGCACCAGGTAAGCACAACCTAAGGACATATATAAATAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000370768.7
CDS CCA 72 bp CTCAGCCCAGGCTGCACTATAATCTGGCTGACCACCTaGAGGAGCCCCAGTCGGAGCAGGAACTGCCTGACC +
Preference number: 6 (lower is better)
Translates to: LSPGCTIIWLTT*RSPSRSRNCLT
Trigger: GGTCAGGCAGTTCCTGCTCCGACTGGGGCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCCTGGGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000492405.5
ENST00000492724.1
CDS CCA 72 bp GCCTGGTGGTCCAGGATTATAAGGTGCAGGGTTGTATaGTCCCATTGGAGTTCCAGGCCCTGGAGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: AWWSRIIRCRVV*SHWSSRPWRPR
Trigger: CCTGGGCCTCCAGGGCCTGGAACTCCAATGGGACCATACAACCCTGCACCTTATAATCCTGGACCACCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS GCA 72 bp ATGAGGAGCCGGGCCTGGTGGTCCAGGATTATAAGGTaGAGGGTTGTATGGTCCCATTGGAGTTCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: MRSRAWWSRIIR*RVVWSHWSSRP
Trigger: GGGCCTGGAACTCCAATGGGACCATACAACCCTGCACCTTATAATCCTGGACCACCAGGCCCGGCTCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS GCA 72 bp GTTCCTGCCTTAGCTGGATCAGGAGGAGCCTGCTGCTaGCAGTGTGGATATGCATTTCCCCATCCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: VPALAGSGGACC*QCGYAFPHPWG
Trigger: TCCCCAGGGATGGGGAAATGCATATCCACACTGGCAGCAGCAGGCTCCTCCTGATCCAGCTAAGGCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS GCA 72 bp TCCGTTCCTGCCTTAGCTGGATCAGGAGGAGCCTGCTaGTGCCAGTGTGGATATGCATTTCCCCATCCCTGG +
Preference number: 6 (lower is better)
Translates to: SVPALAGSGGAC*CQCGYAFPHPW
Trigger: CCAGGGATGGGGAAATGCATATCCACACTGGCAGCAGCAGGCTCCTCCTGATCCAGCTAAGGCAGGAACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 72 bp ATATGGGGCTGGAGGACCATGAGGAGCCGGGCCTGGTaGTCCAGGATTATAAGGTGCAGGGTTGTATGGTCC +
Preference number: 6 (lower is better)
Translates to: IWGWRTMRSRAW*SRIIRCRVVWS
Trigger: GGACCATACAACCCTGCACCTTATAATCCTGGACCACCAGGCCCGGCTCCTCATGGTCCTCCAGCCCCATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 72 bp CTTAGCTGGATCAGGAGGAGCCTGCTGCTGCCAGTGTaGATATGCATTTCCCCATCCCTGGGGAGCATATGG +
Preference number: 6 (lower is better)
Translates to: LSWIRRSLLLPV*ICISPSLGSIW
Trigger: CCATATGCTCCCCAGGGATGGGGAAATGCATATCCACACTGGCAGCAGCAGGCTCCTCCTGATCCAGCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 72 bp GCAGCATCTTCAGCACTGAGGTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGTCTGGGCATAATAGGC +
Preference number: 6 (lower is better)
Translates to: AASSALRCWRML*HSLGTCLGIIG
Trigger: GCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGTGCTGAAGATGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492724.1
CDS CCA 72 bp CTGGCTGGATCAAACCTGAGGTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGTCTGGGCATAATAGGC +
Preference number: 6 (lower is better)
Translates to: LAGSNLRCWRML*HSLGTCLGIIG
Trigger: GCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGTTTGATCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492405.5
CDS CAA 72 bp TTTGCTGCAATCTGCCGGGCTCTCTGCAGTGCATCTTaGAAAGCGTCGTTAACTCCTCCACCACCACCGCCG +
Preference number: 6 (lower is better)
Translates to: FAAICRALCSAS*KASLTPPPPPP
Trigger: CGGCGGTGGTGGTGGAGGAGTTAACGACGCTTTCAAAGATGCACTGCAGAGAGCCCGGCAGATTGCAGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000421641.1
CDS CCA 72 bp TTGTCTATAATACTCAGCCCAGGCTGCACTATAATCTaGCTGACCACCTGGAGGAGCCCCAGTCGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LSIILSPGCTII*LTTWRSPSRSR
Trigger: CCTGCTCCGACTGGGGCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTATTATAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000492405.5
ENST00000492724.1
CDS GCA 72 bp AGTTGGTGCACCTGCAGGGGCTGCTGGTGGTGGCTGTaGTTGCTGTTGATAATAGTGAGCGTAATAAGCAGC +
Preference number: 6 (lower is better)
Translates to: SWCTCRGCWWWL*LLLIIVSVISS
Trigger: GCTGCTTATTACGCTCACTATTATCAACAGCAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCACCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CAA 90 bp ACCTGCACTGAGGTGCTGGAGGATGCTGTGGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTGCTTGTTGTCTATAATACTCAGCCC +
Preference number: 6 (lower is better)
Translates to: TCTEVLEDAVAFPGD*SGHNRLLVVYNTQP
Trigger: GGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGTGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294623.8
ENST00000488814.5
CDS CAA 90 bp ATTGGCCCTGAGGTGCTGGAGGATGCTGTGGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTGCTTGTTGTCTATAATACTCAGCCC +
Preference number: 6 (lower is better)
Translates to: IGPEVLEDAVAFPGD*SGHNRLLVVYNTQP
Trigger: GGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS GCA 72 bp ATAGGCTGCTTGTTGTCTATAATACTCAGCCCAGGCTaGACTATAATCTGGCTGACCACCTGGAGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: IGCLLSIILSPG*TIIWLTTWRSP
Trigger: GGGGCTCCTCCAGGTGGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTATTATAGACAACAAGCAGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000492405.5
ENST00000492724.1
CDS CCA 72 bp AGTTTGAGTTGTAGTTGGTGCACCTGCAGGGGCTGCTaGTGGTGGCTGTGCTTGCTGTTGATAATAGTGAGC +
Preference number: 6 (lower is better)
Translates to: SLSCSWCTCRGC*WWLCLLLIIVS
Trigger: GCTCACTATTATCAACAGCAAGCACAGCCACCACCAGCAGCCCCTGCAGGTGCACCAACTACAACTCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 72 bp ATGATTTGCAAATCCCTGAGGTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGTCTGGGCATAATAGGC +
Preference number: 6 (lower is better)
Translates to: MICKSLRCWRML*HSLGTCLGIIG
Trigger: GCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGGATTTGCAAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370767.5
CDS CCA 72 bp TTCTTATTATTGGCCCTGAGGTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGTCTGGGCATAATAGGC +
Preference number: 6 (lower is better)
Translates to: FLLLALRCWRML*HSLGTCLGIIG
Trigger: GCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGGCCAATAATAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370768.7
CDS CAA 90 bp TTCAGCACTGAGGTGCTGGAGGATGCTGTGGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTGCTTGTTGTCTATAATACTCAGCCC +
Preference number: 6 (lower is better)
Translates to: FSTEVLEDAVAFPGD*SGHNRLLVVYNTQP
Trigger: GGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492724.1
CDS CAA 90 bp CTGTGGCATTCCCTGGGGACTTGTCTGGGCATAATAGGCTGCTTGTaGTCTATAATACTCAGCCCAGGCTGCACTATAATCTGGCTGACC +
Preference number: 6 (lower is better)
Translates to: LWHSLGTCLGIIGCL*SIILSPGCTIIWLT
Trigger: GGTCAGCCAGATTATAGTGCAGCCTGGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000488814.5
ENST00000492405.5
ENST00000492724.1
CDS CAA 90 bp ATCAAACCTGAGGTGCTGGAGGATGCTGTGGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTGCTTGTTGTCTATAATACTCAGCCC +
Preference number: 6 (lower is better)
Translates to: IKPEVLEDAVAFPGD*SGHNRLLVVYNTQP
Trigger: GGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492405.5
CDS GCA 72 bp TTGAATAGTCTGCCATGGTTGCACTATAAGAGCCGCTaGCGCCTGTTCAGAGACTTCCTCTCAGCTAACAGC +
Preference number: 6 (lower is better)
Translates to: LNSLPWLHYKSR*RLFRDFLSANS
Trigger: GCTGTTAGCTGAGAGGAAGTCTCTGAACAGGCGGCAGCGGCTCTTATAGTGCAACCATGGCAGACTATTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000421641.1
CDS GCA 72 bp TCCAATTTTTGCTGCAATCTGCCGGGCTCTCTGCAGTaGATCTTTGAAAGCGTCGTTAACTCCTCCACCACC +
Preference number: 6 (lower is better)
Translates to: SNFCCNLPGSLQ*IFESVVNSSTT
Trigger: GGTGGTGGAGGAGTTAACGACGCTTTCAAAGATGCACTGCAGAGAGCCCGGCAGATTGCAGCAAAAATTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000421641.1
CDS GCA 72 bp TGGCATTCCCTGGGGACTTGTCTGGGCATAATAGGCTaGTTGTTGTCTATAATACTCAGCCCAGGCTGCACT +
Preference number: 6 (lower is better)
Translates to: WHSLGTCLGIIG*LLSIILSPGCT
Trigger: AGTGCAGCCTGGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000488814.5
ENST00000492405.5
ENST00000492724.1
CDS CCA 72 bp GCAATTACATTATACCTGAGGTGCTGGAGGATGCTGTaGCATTCCCTGGGGACTTGTCTGGGCATAATAGGC +
Preference number: 6 (lower is better)
Translates to: AITLYLRCWRML*HSLGTCLGIIG
Trigger: GCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGTATAATGTAATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487684.1
CDS CAA 90 bp ATTATACCTGAGGTGCTGGAGGATGCTGTGGCATTCCCTGGGGACTaGTCTGGGCATAATAGGCTGCTTGTTGTCTATAATACTCAGCCC +
Preference number: 6 (lower is better)
Translates to: IIPEVLEDAVAFPGD*SGHNRLLVVYNTQP
Trigger: GGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGAATGCCACAGCATCCTCCAGCACCTCAGGTATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487684.1
CDS CCA 72 bp CTCTTCCCAAGCCTTGGTATAATCAACCTGTCCAGCTaGGGCTGGATTCTGCTGATCTCCTTGTCCATTAGT +
Preference number: 6 (lower is better)
Translates to: LFPSLGIINLSS*GWILLISLSIS
Trigger: ACTAATGGACAAGGAGATCAGCAGAATCCAGCCCCAGCTGGACAGGTTGATTATACCAAGGCTTGGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CCA 72 bp CTCTTCCCAAGCCTTGGTATAATCAACCTGTCCAGCTaGGGCTGGATTCTGCTGATCTCCTTGTTCAAGCAA +
Preference number: 6 (lower is better)
Translates to: LFPSLGIINLSS*GWILLISLFKQ
Trigger: TTGCTTGAACAAGGAGATCAGCAGAATCCAGCCCCAGCTGGACAGGTTGATTATACCAAGGCTTGGGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487684.1
CDS CAA 72 bp TGCAGCATGTTGACATCGGTCTGGAGGTCCTGTTATTaGTGCTATCCTTTCGGGTGTTGTCCCATCATCTGG +
Preference number: 6 (lower is better)
Translates to: CSMLTSVWRSCY*CYPFGCCPIIW
Trigger: CCAGATGATGGGACAACACCCGAAAGGATAGCACAAATAACAGGACCTCCAGACCGATGTCAACATGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
CDS CAA 72 bp AGGGCATTCCCTCCCAGTGTGTTGTACTGCTCGGACTaGTCCAAGAGCCATCTCCATCTTCTAAAGGTCTTT +
Preference number: 6 (lower is better)
Translates to: RAFPPSVLYCSD*SKSHLHLLKVF
Trigger: AAAGACCTTTAGAAGATGGAGATGGCTCTTGGACAAGTCCGAGCAGTACAACACACTGGGAGGGAATGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421641.1
CDS CCA 72 bp CCAAGCCTTGGTATAATCAACCTGTCCAGCTGGGGCTaGATTCTGCTGATCTCCTTGTCCATTAGTTTGAGT +
Preference number: 6 (lower is better)
Translates to: PSLGIINLSSWG*ILLISLSISLS
Trigger: ACTCAAACTAATGGACAAGGAGATCAGCAGAATCCAGCCCCAGCTGGACAGGTTGATTATACCAAGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS CAA 72 bp TCCCTGGGGACTTGTCTGGGCATAATAGGCTGCTTGTaGTCTATAATACTCAGCCCAGGCTGCACTATAATC +
Preference number: 6 (lower is better)
Translates to: SLGTCLGIIGCL*SIILSPGCTII
Trigger: GATTATAGTGCAGCCTGGGCTGAGTATTATAGACAACAAGCAGCCTATTATGCCCAGACAAGTCCCCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000487684.1
ENST00000488814.5
ENST00000492405.5
ENST00000492724.1
CDS TCA 72 bp TTGATAATAGTGAGCGTAATAAGCAGCCCAAGCTGCTaGATTTGGATCCGTTCCTGCCTTAGCTGGATCAGG +
Preference number: 6 (lower is better)
Translates to: LIIVSVISSPSC*IWIRSCLSWIR
Trigger: CCTGATCCAGCTAAGGCAGGAACGGATCCAAATTCAGCAGCTTGGGCTGCTTATTACGCTCACTATTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000470287.1
CDS GCA 72 bp GGTAGTTTCTTCTACATTGAGCCCTTCTATGGTCCATaGTCATCGGCTCACCAATGGCATACACTCAAAGGA +
Preference number: 6 (lower is better)
Translates to: GSFFYIEPFYGP*SSAHQWHTLKG
Trigger: TCCTTTGAGTGTATGCCATTGGTGAGCCGATGAGCATGGACCATAGAAGGGCTCAATGTAGAAGAAACTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000474632.5
ENST00000483894.5
ENST00000488814.5
ENST00000489495.5
ENST00000492405.5
ENST00000492724.1
CDS CCA 72 bp CCAAGCCTTGGTATAATCAACCTGTCCAGCTGGGGCTaGATTCTGCTGATCTCCTTGTTCAAGCAAAACAAA +
Preference number: 6 (lower is better)
Translates to: PSLGIINLSSWG*ILLISLFKQNK
Trigger: TTTGTTTTGCTTGAACAAGGAGATCAGCAGAATCCAGCCCCAGCTGGACAGGTTGATTATACCAAGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487684.1
CDS CAA 72 bp TCTGGAAGGCCACCACTGTCAGGAGCTATCTGTATTTaGCATCCAGATTCCTGTTGTATGCGTGAGATCTGT +
Preference number: 6 (lower is better)
Translates to: SGRPPLSGAICI*HPDSCCMREIC
Trigger: ACAGATCTCACGCATACAACAGGAATCTGGATGCAAAATACAGATAGCTCCTGACAGTGGTGGCCTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
ENST00000421641.1
CDS CAA 72 bp AGGATTTACTGGGCCACCAATCTTTTCTTCTATGAGTaGCCGAGCATAGTCTATCTGTTGTGGAGTGCCACG +
Preference number: 6 (lower is better)
Translates to: RIYWATNLFFYE*PSIVYLLWSAT
Trigger: CGTGGCACTCCACAACAGATAGACTATGCTCGGCAACTCATAGAAGAAAAGATTGGTGGCCCAGTAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
CDS CAA 90 bp AGCCTGAACACTTCGAAGAAGGTCTGTAATAATTTCTGCAGCATGTaGACATCGGTCTGGAGGTCCTGTTATTTGTGCTATCCTTTCGGG +
Preference number: 6 (lower is better)
Translates to: SLNTSKKVCNNFCSM*TSVWRSCYLCYPFG
Trigger: CCCGAAAGGATAGCACAAATAACAGGACCTCCAGACCGATGTCAACATGCTGCAGAAATTATTACAGACCTTCTTCGAAGTGTTCAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
CDS CAA 90 bp TCTTTATGGGTAACTATCTCAGGACCTGATTTTATGAGCTATGATTaGGTGCTTGCAGCATCTTCAGCACTGAGGTGCTGGAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: SLWVTISGPDFMSYD*VLAASSALRCWRML
Trigger: CAGCATCCTCCAGCACCTCAGTGCTGAAGATGCTGCAAGCACCAAATCATAGCTCATAAAATCAGGTCCTGAGATAGTTACCCATAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492724.1
CDS TCA 72 bp GACCCATACTCATTCCGAACTTCTCTGAAACCGCCTTaGTCACGAATTAACTCTAACACCATTTCCTTGGCT +
Preference number: 6 (lower is better)
Translates to: DPYSFRTSLKPP*SRINSNTISLA
Trigger: AGCCAAGGAAATGGTGTTAGAGTTAATTCGTGATCAAGGCGGTTTCAGAGAAGTTCGGAATGAGTATGGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
CDS TCA 72 bp CTAAAGGATTTACTGGGCCACCAATCTTTTCTTCTATaGGTTGCCGAGCATAGTCTATCTGTTGTGGAGTGC +
Preference number: 6 (lower is better)
Translates to: LKDLLGHQSFLL*VAEHSLSVVEC
Trigger: GCACTCCACAACAGATAGACTATGCTCGGCAACTCATAGAAGAAAAGATTGGTGGCCCAGTAAATCCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
CDS CAA 90 bp TCTTTATGGGTAACTATCTCAGGACCTGATTTTATGAGCTATGATTaGGTGCTTGCAGCATCTTCAGCACTGGTGCTTTTTGCAGCAGAA +
Preference number: 6 (lower is better)
Translates to: SLWVTISGPDFMSYD*VLAASSALVLFAAE
Trigger: TTCTGCTGCAAAAAGCACCAGTGCTGAAGATGCTGCAAGCACCAAATCATAGCTCATAAAATCAGGTCCTGAGATAGTTACCCATAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474632.5
ENST00000488814.5
ENST00000489495.5
ENST00000492405.5
CDS CAA 72 bp ACTTCGAAGAAGGTCTGTAATAATTTCTGCAGCATGTaGACATCGGTCTGGAGGTCCTGTTATTTGTGCTAT +
Preference number: 6 (lower is better)
Translates to: TSKKVCNNFCSM*TSVWRSCYLCY
Trigger: ATAGCACAAATAACAGGACCTCCAGACCGATGTCAACATGCTGCAGAAATTATTACAGACCTTCTTCGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294623.8
ENST00000370767.5
ENST00000370768.7
CDS CAA 72 bp AAAGAAAAAGTGGTTAATATAAATGGTGGTGGCTTCTaGCATGATTTGCAAATCCCTGAGGTGCTGGAGGAT +
Preference number: 6 (lower is better)
Translates to: KEKVVNINGGGF*HDLQIPEVLED
Trigger: ATCCTCCAGCACCTCAGGGATTTGCAAATCATGCAAGAAGCCACCACCATTTATATTAACCACTTTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370767.5