Pregenerated sensors for FTH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000167996Ensembl transcript IDs: ENST00000273550.12, ENST00000529191.5, ENST00000529631.5, ENST00000533138.1
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCCTTAGTTCTGCCTGGATAGATTTCTaGTTCATCCCAAGACCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HWKHLTQTLDSESGTLSSAWIDF*FIPRPQ Trigger: TTGAGGTCTTGGGATGAATCAGAAATCTATCCAGGC...AGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273550.12 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTGAATCCAAGACAGCCACACTCAAAGACAACACCTaGGTACCAAATTTCTTTATT | + |
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Preference number: 2 (lower is better) Translates to: LWIQSREPLVLSESKTATLKDNT*VPNFFI Trigger: AATAAAGAAATTTGGTACCCAGGTGTTGTCTTTGAG...TGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273550.12 |
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| 3UTR TCA 72 bp | ACTCTGGATTCAGAGTCGGGAACCCTTAGTTCTATCTaGATCCAAGACAGCCACACCTTAGTATACTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: TLDSESGTLSSI*IQDSHTLVYCP Trigger: TGGGCAGTATACTAAGGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGTTCCCGACTCTGAATCCAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273550.12 |
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| CDS-3UTR TCA 90 bp | ACAGGATTCTCACCTCAATCTTTGAGGCTGCAGGCAGGCACCCATCTCCCCATTTCTCACCTCAATCTTTaGGGCTGCAGGCAGGCACCC | + |
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Preference number: 4 (lower is better) Translates to: TGFSPQSLRLQAGTHLPISHLNL*GCRQAP Trigger: GGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGA...AATGGGGAGATGGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAATCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529631.5 |
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| CDS-3UTR CCA 90 bp | CACAGGATTCTCACCTCAATCTTTGAGGCTGCAGGCAGGCACCCATCTCCCCATGTGTCCCTGTTGGCATaGACAGGTAAACGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HRILTSIFEAAGRHPSPHVSLLA*TGKRRR Trigger: CCTCCTACGTTTACCTGTCCATGCCAACAGGGACAC...ATGGGGAGATGGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAATCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529631.5 |
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| CDS-3UTR TCA 90 bp | ACAGGATTCTCACCTCAATCTTTGAGGCTGCAGGCAGGCACCCATCTCCCCATTAGGTCCTGCCTGGGATaGTCTTTCTGTGGGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: TGFSPQSLRLQAGTHLPIRSCLG*SFCGTS Trigger: AGAAGTCCCACAGAAAGATCATCCCAGGCAGGACCT...AATGGGGAGATGGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAATCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529631.5 |
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| CDS-3UTR CCA 90 bp | CACAGGATTCTCACCTCAATCTTTGAGGCTGCAGGCAGGCACCCATCTCCCCATGGGATGATCTTTCTGTaGGACTTCTTCTGTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HRILTSIFEAAGRHPSPHGMIFL*DFFCPW Trigger: CCAGGGACAGAAGAAGTCCCACAGAAAGATCATCCC...ATGGGGAGATGGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAATCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529631.5 |
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| CDS-3UTR CCA 90 bp | ACAGGATTCTCACCTCAATCTTTGAGGCTGCAGGCAGGCACCCATCTCCCCATTATACAAGGTCCTGCCTaGGATGATCTTTCTGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: TGFSPQSLRLQAGTHLPIIQGPA*DDLSVG Trigger: TCCCACAGAAAGATCATCCCAGGCAGGACCTTGTAT...AATGGGGAGATGGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAATCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529631.5 |
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| CDS-3UTR TCA 90 bp | CTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCCTTACCCTTAGTTCTATCTaGATCCAAGACAGCCACACC | + |
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Preference number: 4 (lower is better) Translates to: LNHWKHLTQTLDSESGTLTLSSI*IQDSHT Trigger: GGTGTGGCTGTCTTGGATTCAGATAGAACTAAGGGT...AAGGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273550.12 |
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| CDS-3UTR TCA 90 bp | ACTGAACCATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCCTGCCTGGATAGATTTCTaGTTCATCCCAAGACCTCAA | + |
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Preference number: 4 (lower is better) Translates to: TEPLETFNSDSGFRVGNPAWIDF*FIPRPQ Trigger: TTGAGGTCTTGGGATGAATCAGAAATCTATCCAGGC...AGGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATGGTTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273550.12 |
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| CDS-3UTR CCA 90 bp | CATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCCTTAGTTCTGCTAGACTGAACCATTaGAAACATTTAACTCAGACT | + |
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Preference number: 4 (lower is better) Translates to: HWKHLTQTLDSESGTLSSARLNH*KHLTQT Trigger: AGTCTGAGTTAAATGTTTCCAATGGTTCAGTCTAGC...AGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273550.12 |
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| CDS-3UTR CCA 90 bp | CATTGGAAACATTTAACTCAGACTCTGGATTCAGAGTCGGGAACCCTTAGTTCTCTCAAAGACAACACCTaGGTACCAAATTTCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: HWKHLTQTLDSESGTLSSLKDNT*VPNFFI Trigger: AATAAAGAAATTTGGTACCCAGGTGTTGTCTTTGAG...AGAACTAAGGGTTCCCGACTCTGAATCCAGAGTCTGAGTTAAATGTTTCCAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273550.12 |
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| CDS-3UTR CAA 90 bp | ACAGGATTCTCACCTCAATCTTTGAGGCTGCAGGCAGGCACCCATCTCCCCATTGACCAGGTGTCCCTGTaGGCATGGACAGGTAAACGT | + |
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Preference number: 5 (lower is better) Translates to: TGFSPQSLRLQAGTHLPIDQVSL*AWTGKR Trigger: ACGTTTACCTGTCCATGCCAACAGGGACACCTGGTC...AATGGGGAGATGGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAATCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529631.5 |
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| CDS-3UTR CAA 90 bp | ACAGGATTCTCACCTCAATCTTTGAGGCTGCAGGCAGGCACCCATCTCCCCATTTTCTCACCTCAATCTTaGAGGCTGCAGGCAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: TGFSPQSLRLQAGTHLPIFSPQS*RLQAGT Trigger: GGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAA...AATGGGGAGATGGGTGCCTGCCTGCAGCCTCAAAGATTGAGGTGAGAATCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000529631.5 |
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| CDS TCA 90 bp | GAGATTCCTCCAAGTCATCAGGCACATACAAGGTCCTGCCTGGGATaGTCTTTCTGTGGGACTTCTTCTGTCCCTGGTGACCAGGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: EIPPSHQAHTRSCLG*SFCGTSSVPGDQVS Trigger: GGACACCTGGTCACCAGGGACAGAAGAAGTCCCACAGAAAGATCATCCCAGGCAGGACCTTGTATGTGCCTGATGACTTGGAGGAATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529191.5 ENST00000529631.5 |
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| CDS CCA 90 bp | AGGGAGAGATTCCTCCAAGTCATCAGGCACATACAAGGTCCTGCCTaGGATGATCTTTCTGTGGGACTTCTTCTGTCCCTGGTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: RERFLQVIRHIQGPA*DDLSVGLLLSLVTR Trigger: CCTGGTCACCAGGGACAGAAGAAGTCCCACAGAAAGATCATCCCAGGCAGGACCTTGTATGTGCCTGATGACTTGGAGGAATCTCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529191.5 ENST00000529631.5 |
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| CDS CCA 72 bp | TTCCTCCAAGTCATCAGGCACATACAAGGTCCTGCCTaGGATGATCTTTCTGTGGGACTTCTTCTGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: FLQVIRHIQGPA*DDLSVGLLLSL Trigger: CAGGGACAGAAGAAGTCCCACAGAAAGATCATCCCAGGCAGGACCTTGTATGTGCCTGATGACTTGGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529191.5 ENST00000529631.5 |
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| CDS CCA 72 bp | AAGTCAGCAAGCCCATCATCTCTAACCACCACGTTTTaGCAAAAGGGACATTACTATTTGCCTAATTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: KSASPSSLTTTF*QKGHYYLPNLV Trigger: AACTAAATTAGGCAAATAGTAATGTCCCTTTTGCCAAAACGTGGTGGTTAGAGATGATGGGCTTGCTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533138.1 |
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