RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FSTL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000168843

Ensembl transcript IDs: ENST00000306100.10, ENST00000379164.8, ENST00000427802.2, ENST00000511170.1

Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTaGGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCAAGAGAT +
Preference number: 1 (lower is better)
Translates to: CIQPKTNLCLQLVVH*GLNKRLKTGFGARD
Trigger: ATCTCTTGCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATACATCTGTAGGCAGTTaGCATCCCAGACAAACTTGC +
Preference number: 2 (lower is better)
Translates to: IFTYHCRATPLFPTYITNTSVGS*HPRQTC
Trigger: GCAAGTTTGTCTGGGATGTCAACTGCCTACAGATGT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCAATTGGTAGTTCATTaGGGGTTAAACAAAAGACTG +
Preference number: 2 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMQLVVH*GLNKRL
Trigger: CAGTCTTTTGTTTAACCCTCAATGAACTACCAATTG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGTTTTAATCTACTTCTaGTGGCCTTCTCATTTCCTC +
Preference number: 2 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSVLIYF*WPSHFL
Trigger: GAGGAAATGAGAAGGCCAGCAGAAGTAGATTAAAAC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACCTAAGACCAACTTATaGCTTCAATTGGTAGTTCAT +
Preference number: 2 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSPKTNL*LQLVVH
Trigger: ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCCACTTTCTATAGCATaGTGCAGATTATACAGTAAA +
Preference number: 2 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMPLSIA*CRLYSK
Trigger: TTTACTGTATAATCTGCAGCATGCTATAGAAAGTGG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACCACTTTCTATAGCATaGTGCAGATTATACAGTAAA +
Preference number: 2 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSPLSIA*CRLYSK
Trigger: TTTACTGTATAATCTGCAGCATGCTATAGAAAGTGG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGAACATCTGTAGGCAGTaGACATCCCAGACAAACTTG +
Preference number: 3 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMNICRQ*TSQTNL
Trigger: CAAGTTTGTCTGGGATGTCAACTGCCTACAGATGTT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR CCA 72 bp TTTTATCAAGCAGTGTCTACAGACAGAGCATCCACATaGTGTAAGCTACAAAAGAAGGATGTATGCGACAGA +
Preference number: 3 (lower is better)
Translates to: FYQAVSTDRAST*CKLQKKDVCDR
Trigger: TCTGTCGCATACATCCTTCTTTTGTAGCTTACACCATGTGGATGCTCTGTCTGTAGACACTGCTTGATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
3UTR TCA 72 bp CCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTaGGGGTTAAACAAAAGACTGAAGACAGGATTTGGT +
Preference number: 3 (lower is better)
Translates to: PKTNLCLQLVVH*GLNKRLKTGFG
Trigger: ACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTATGGGTCCTGTTGGTaGAGCGGGTCCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMYGSCW*SGSHRA
Trigger: TGCCCTGTGGGACCCGCTTCACCAACAGGACCCATA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCTCCAAAGTCACGCCTaGATGAGCGCCCAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMLQSHA*MSAQVA
Trigger: TGCCACCTGGGCGCTCATTCAGGCGTGACTTTGGAG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGGCGTTGCCTTCAGGTaGTGGAGCAACTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMGVAFR*WSNWSA
Trigger: AGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGTTGCCTTCAGGTGCTaGAGCAACTGGTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMVAFRC*SNWSAR
Trigger: GCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAAC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTATGGGTCCTGTTGGTaGAGCGGGTCCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWYGSCW*SGSHRA
Trigger: TGCCCTGTGGGACCCGCTTCACCAACAGGACCCATA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGGTGCAAGAGGGCGTTaGCTTCAGGTGCTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMGARGR*LQVLEQ
Trigger: TTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGTTGCCTTCAGGTGCTaGAGCAACTGGTCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSVAFRC*SNWSAR
Trigger: GCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAAC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATGTGTGGATCGTGTGGTaGGGCACATTCCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHVWIVW*GTFPLA
Trigger: GGCCAGTGGGAATGTGCCTCACCACACGATCCACAC...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATGGCGTTGCCTTCAGGTaGTGGAGCAACTGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHGVAFR*WSNWSA
Trigger: AGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCC...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCGGTGCAAGAGGGCGTTaGCTTCAGGTGCTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCGARGR*LQVLEQ
Trigger: TTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACC...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTAGGTGCTGGAGCAACTaGTCCGCTCGCGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILRCWSN*SARVSG
Trigger: ACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCT...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGCCAAGCTGAGGCTTTaGTATGCCCTCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMAKLRL*YALCMA
Trigger: TGCCATGCAGAGGGCATACCAAAGCCTCAGCTTGGC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGGTCCACCATGACCTGTaGGGAAACTGCTCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWVHHDL*GNCSGA
Trigger: AGCACCGGAGCAGTTTCCCCACAGGTCATGGTGGAC...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATGTGTGGATCGTGTGGTaGGGCACATTCCCACTGGCC +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNVWIVW*GTFPLA
Trigger: GGCCAGTGGGAATGTGCCTCACCACACGATCCACAC...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTTACACCGTCCACCATaGCCTGTGGGGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCLHRPP*PVGKLL
Trigger: GAGCAGTTTCCCCACAGGTCATGGTGGACGGTGTAA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCTGGGACAGGGTCTGTaGTCACTGCCTGAACAACTT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMLGQGL*SLPEQL
Trigger: AAGTTGTTCAGGCAGTGAGCACAGACCCTGTCCCAG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGGGAAACTGCTCCGGTaGTGTCAGGTTTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSGKLLR*CQVCSQ
Trigger: TTGGCTGCAAACCTGACAGCACCGGAGCAGTTTCCC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCGGGAAACTGCTCCGGTaGTGTCAGGTTTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCGKLLR*CQVCSQ
Trigger: TTGGCTGCAAACCTGACAGCACCGGAGCAGTTTCCC...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGACCTGTGGGGAAACTaGTCCGGTGCTGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSDLWGN*SGAVRF
Trigger: AAACCTGACAGCACCGGAGCAGTTTCCCCACAGGTC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGGCACCGACAGCACAGTaGACAGTACCAGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWAPTAQ*TVPAPF
Trigger: GAAAGGAGCTGGTACTGTCCACTGTGCTGTCGGTGC...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306100.10
CDS-3UTR CCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAGGTGCTGGAGCAACTaGTCCGCTCGCGTCTCAGGT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNRCWSN*SARVSG
Trigger: ACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGGCCAAGCTGAGGCTTTaGTATGCCCTCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWAKLRL*YALCMA
Trigger: TGCCATGCAGAGGGCATACCAAAGCCTCAGCTTGGC...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTAAAGTCACGCCTGAATaGGCGCCCAGGTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILKVTPE*APRWQT
Trigger: TGTTTGCCACCTGGGCGCTCATTCAGGCGTGACTTT...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGGGTCTCAGGGTTCCTTaGATGGCACAGCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWGLRVP*MAQLRT
Trigger: TGTTCTGAGCTGTGCCATTCAAGGAACCCTGAGACC...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCTGGATACACCCGGATaGCTGGAGGAACATTCACTT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMLDTPG*LEEHSL
Trigger: AAGTGAATGTTCCTCCAGTCATCCGGGTGTATCCAG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTTCAACCAGCCAAGCTaGGGCTTTGGTATGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWFNQPS*GFGMPS
Trigger: AGAGGGCATACCAAAGCCTCAGCTTGGCTGGTTGAA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCAGGTTTGCAGCCAATaGAGTAGTAGCCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMQVCSQ*SSSLPS
Trigger: ACTTGGGAGGCTACTACTTCATTGGCTGCAAACCTG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTTACACCGTCCACCATaGCCTGTGGGGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHLHRPP*PVGKLL
Trigger: GAGCAGTTTCCCCACAGGTCATGGTGGACGGTGTAA...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCCTTTGGTATGCCCTCTaGATGGCACCTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCLWYAL*MAPKTG
Trigger: GCCAGTCTTAGGTGCCATGCAGAGGGCATACCAAAG...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCTTTGGTATGCCCTCTaGATGGCACCTAAGACTGGC +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWLWYAL*MAPKTG
Trigger: GCCAGTCTTAGGTGCCATGCAGAGGGCATACCAAAG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCCTGGGACAGGGTCTGTaGTCACTGCCTGAACAACTT +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCLGQGL*SLPEQL
Trigger: AAGTTGTTCAGGCAGTGAGCACAGACCCTGTCCCAG...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAAAGTCACGCCTGAATaGGCGCCCAGGTGGCAAACA +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNKVTPE*APRWQT
Trigger: TGTTTGCCACCTGGGCGCTCATTCAGGCGTGACTTT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTGGTCTCAGGGTTCCTTaGATGGCACAGCTCAGAACA +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILGLRVP*MAQLRT
Trigger: TGTTCTGAGCTGTGCCATTCAAGGAACCCTGAGACC...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCTGGATACACCCGGATaGCTGGAGGAACATTCACTT +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWLDTPG*LEEHSL
Trigger: AAGTGAATGTTCCTCCAGTCATCCGGGTGTATCCAG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTTTGACATTAACAGCTaGTGCCCACACACACCTCTG +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMFDINS*CPHTPL
Trigger: CAGAGGTGTGTGTGGGCATCAGCTGTTAATGTCAAA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCGGTGTCATCAGGTATTaGCCAAACAAGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCGVIRY*PNKPLS
Trigger: GGACAGTGGCTTGTTTGGTCAATACCTGATGACACC...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATGACCTGTGGGGAAACTaGTCCGGTGCTGTCAGGTTT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNDLWGN*SGAVRF
Trigger: AAACCTGACAGCACCGGAGCAGTTTCCCCACAGGTC...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCATATCCTCCTTCTTTaGTTGGCCTTCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMHILLL*LAFLPT
Trigger: AGTCGGAAGGAAGGCCAACCAAAGAAGGAGGATATG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTCAGGGTTCCTTGAATaGCACAGCTCAGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWSGFLE*HSSEQH
Trigger: GTGCTGTTCTGAGCTGTGCCATTCAAGGAACCCTGA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTCAGGGTTCCTTGAATaGCACAGCTCAGAACAGCAC +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCSGFLE*HSSEQH
Trigger: GTGCTGTTCTGAGCTGTGCCATTCAAGGAACCCTGA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAAAGGTAGTGGCCATCTaGAGAGACATATGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSKVVAI*RDIWSA
Trigger: GGCACTCCATATGTCTCTCCAGATGGCCACTACCTT...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGTGATGCTTAGTTTCTaGTCTTCTGGCAGACTCAAC +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMVMLSF*SSGRLN
Trigger: GTTGAGTCTGCCAGAAGATCAGAAACTAAGCATCAC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGGACAGACTTCATCCTaGAATCCAAGGAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMGQTSS*NPRSFS
Trigger: TGAAAAGCTCCTTGGATTTCAGGATGAAGTCTGTCC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTTTGACATTAACAGCTaGTGCCCACACACACCTCTG +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCFDINS*CPHTPL
Trigger: CAGAGGTGTGTGTGGGCATCAGCTGTTAATGTCAAA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAACATCTGTAGGCAGTTaGCATCCCAGACAAACTTGC +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSTSVGS*HPRQTC
Trigger: GCAAGTTTGTCTGGGATGTCAACTGCCTACAGATGT...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTCATACAGGCACATTCTaGTTGCCCTGTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILHTGTF*LPCLSA
Trigger: AGCAGAGAGACAGGGCAAGCAGAATGTGCCTGTATG...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGAGGGTCTGTGCTCACTaGCTGAACAACTTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWRVCAH*LNNFLG
Trigger: TCCCAAAAAGTTGTTCAGGCAGTGAGCACAGACCCT...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACCACTGTCCTGGATTTaGCTGTTTTTCCGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSPLSWI*LFFRFQ
Trigger: TTGGAACCGGAAAAACAGGCAAATCCAGGACAGTGG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCATATCCTCCTTCTTTaGTTGGCCTTCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWHILLL*LAFLPT
Trigger: AGTCGGAAGGAAGGCCAACCAAAGAAGGAGGATATG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTCTGGCAGACTCAACTaGATCACTTGGAATGCTCTA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMSGRLN*ITWNAL
Trigger: TAGAGCATTCCAAGTGATCCAGTTGAGTCTGCCAGA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGATACACCCGGATGACTaGAGGAACATTCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMIHPDD*RNIHLE
Trigger: TTCCAAGTGAATGTTCCTCCAGTCATCCGGGTGTAT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCCATCTCCCTCAGCTTTaGGACAGACTTCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCHLPQL*DRLHPE
Trigger: TTCAGGATGAAGTCTGTCCCAAAGCTGAGGGAGATG...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAAAATTGCTTTCCCACTaGTTGGGTGTGGATCGTGTG +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSKLLSH*LGVDRV
Trigger: CACACGATCCACACCCAACCAGTGGGAAAGCAATTT...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCATCTGGAGAGACATATaGAGTGCCCGTCACATCACT +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCIWRDI*SARHIT
Trigger: AGTGATGTGACGGGCACTCCATATGTCTCTCCAGAT...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAAACAAGCCACTGTCCTaGATTTGCCTGTTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSNKPLS*ICLFFR
Trigger: CCGGAAAAACAGGCAAATCCAGGACAGTGGCTTGTT...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGAGAACCAAGACAACTaGCCAGCACTTAAACATCCT +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSENQDN*PALKHP
Trigger: AGGATGTTTAAGTGCTGGTCAGTTGTCTTGGTTCTC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCATTTGCTTGAAGCGTaGGTTGTTTGGAAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMHLLEA*VVWKAL
Trigger: CAAAGCTTTCCAAACAACTCACGCTTCAAGCAAATG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTCGCACATTGCTTATGTaGACCTCACTGCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILRTLLM*TSLPFA
Trigger: AGCAAATGGCAGTGAGGTTCACATAAGCAATGTGCG...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGTGTTGTGGTGGGAATaGAAAAATCATCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMVLWWE*KNHPLC
Trigger: ACAGAGTGGATGATTTTTTCATTCCCACCACAACAC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGTGTGTATATGCCAATaGCTGAGGAACGCACTTATA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMVCICQ*LRNALI
Trigger: TATAAGTGCGTTCCTCAGTCATTGGCATATACACAC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCAGGTTTGCAGCCAATaGAGTAGTAGCCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNQVCSQ*SSSLPS
Trigger: ACTTGGGAGGCTACTACTTCATTGGCTGCAAACCTG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCTGATGGTAATGTACTaGACCCTTACAAGACCTTTC +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMLMVMY*TLTRPF
Trigger: GAAAGGTCTTGTAAGGGTTCAGTACATTACCATCAG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATGGTGTCATCAGGTATTaGCCAAACAAGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNGVIRY*PNKPLS
Trigger: GGACAGTGGCTTGTTTGGTCAATACCTGATGACACC...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATACATCTGTAGGCAGTTaGCATCCCAGACAAACTTGC +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHTSVGS*HPRQTC
Trigger: GCAAGTTTGTCTGGGATGTCAACTGCCTACAGATGT...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGGTTTGTAGTGACGTTTaGAAAGGTCCATACAGGCAC +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWVCSDV*KGPYRH
Trigger: GTGCCTGTATGGACCTTTGCAAACGTCACTACAAAC...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTTGTTCATAGCCATCTaGATAGCAGGTGTAATTGCC +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMLFIAI*IAGVIA
Trigger: GGCAATTACACCTGCTATGCAGATGGCTATGAACAA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGCACATCAGTTTGTGTaGTTGAACTACCGTAGATGT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMAHQFV*LNYRRC
Trigger: ACATCTACGGTAGTTCAAGCACACAAACTGATGTGC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCCAAGGCCATTCTTCTaGCTTGAGTGGTTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNPRPFF*LEWFLE
Trigger: CTCAAGGAACCACTCAAGGCAGAAGAATGGCCTTGG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTTTGTCAAGTTGATATaGGTCCTGTTGGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWFVKLI*VLLVKR
Trigger: CCGCTTCACCAACAGGACCCATATCAACTTGACAAA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTCTGGCAGACTCAACTaGATCACTTGGAATGCTCTA +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCSGRLN*ITWNAL
Trigger: TAGAGCATTCCAAGTGATCCAGTTGAGTCTGCCAGA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTATCTGGAGAGACATATaGAGTGCCCGTCACATCACT +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILIWRDI*SARHIT
Trigger: AGTGATGTGACGGGCACTCCATATGTCTCTCCAGAT...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAAGGTAGTGGCCATCTaGAGAGACATATGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNKVVAI*RDIWSA
Trigger: GGCACTCCATATGTCTCTCCAGATGGCCACTACCTT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGGCTTCAGTAAAGGATaGTTGAAATGCCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMGFSKG*LKCQIR
Trigger: TCTGATCTGGCATTTCAACCATCCTTTACTGAAGCC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTAACAAGCCACTGTCCTaGATTTGCCTGTTTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILNKPLS*ICLFFR
Trigger: CCGGAAAAACAGGCAAATCCAGGACAGTGGCTTGTT...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATGTGATGCTTAGTTTCTaGTCTTCTGGCAGACTCAAC +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHVMLSF*SSGRLN
Trigger: GTTGAGTCTGCCAGAAGATCAGAAACTAAGCATCAC...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATCCACAGTTGCTGCAGTaGTGCTTAGTTTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHPQLLQ*CLVSDL
Trigger: AAGATCAGAAACTAAGCATCACTGCAGCAACTGTGG...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCGCACATTGCTTATGTaGACCTCACTGCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNRTLLM*TSLPFA
Trigger: AGCAAATGGCAGTGAGGTTCACATAAGCAATGTGCG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCGTGTTGTGGTGGGAATaGAAAAATCATCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCVLWWE*KNHPLC
Trigger: ACAGAGTGGATGATTTTTTCATTCCCACCACAACAC...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCGTGTGTATATGCCAATaGCTGAGGAACGCACTTATA +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCVCICQ*LRNALI
Trigger: TATAAGTGCGTTCCTCAGTCATTGGCATATACACAC...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATATTGAACCCAATGACTaGGTCAGTTACACCGTCCAC +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNIEPND*VSYTVH
Trigger: GTGGACGGTGTAACTGACTCAGTCATTGGGTTCAAT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTGTTTGTAGTGACGTTTaGAAAGGTCCATACAGGCAC +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILVCSDV*KGPYRH
Trigger: GTGCCTGTATGGACCTTTGCAAACGTCACTACAAAC...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCATTGTTCATAGCCATCTaGATAGCAGGTGTAATTGCC +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSLFIAI*IAGVIA
Trigger: GGCAATTACACCTGCTATGCAGATGGCTATGAACAA...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGAACCTCACTGCCATTTaGTTGAAGCGTGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWNLTAI*LKRELF
Trigger: AAACAACTCACGCTTCAAGCAAATGGCAGTGAGGTT...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTCCTGCTTCATTCTTTaGGATACAAGTGTATGCTCC +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWSCFIL*DTSVCS
Trigger: GGAGCATACACTTGTATCGCAAAGAATGAAGCAGGA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCATCCTGCTTCATTCTTTaGGATACAAGTGTATGCTCC +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSSCFIL*DTSVCS
Trigger: GGAGCATACACTTGTATCGCAAAGAATGAAGCAGGA...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAGGGTCTGTGCTCACTaGCTGAACAACTTTTTGGGA +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNRVCAH*LNNFLG
Trigger: TCCCAAAAAGTTGTTCAGGCAGTGAGCACAGACCCT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGAAAGGATGGTTGAAATaGCAGATCAGATATGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMKGWLK*QIRYVQ
Trigger: CTGCACATATCTGATCTGGCATTTCAACCATCCTTT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCCACTGTCCTGGATTTaGCTGTTTTTCCGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNPLSWI*LFFRFQ
Trigger: TTGGAACCGGAAAAACAGGCAAATCCAGGACAGTGG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGTTTTAATCTACTTCTaGTGGCCTTCTCATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMVLIYF*WPSHFL
Trigger: GAGGAAATGAGAAGGCCAGCAGAAGTAGATTAAAAC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATATACACCCGGATGACTaGAGGAACATTCACTTGGAA +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHIHPDD*RNIHLE
Trigger: TTCCAAGTGAATGTTCCTCCAGTCATCCGGGTGTAT...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCATCTCCCTCAGCTTTaGGACAGACTTCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNHLPQL*DRLHPE
Trigger: TTCAGGATGAAGTCTGTCCCAAAGCTGAGGGAGATG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAAATTGCTTTCCCACTaGTTGGGTGTGGATCGTGTG +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNKLLSH*LGVDRV
Trigger: CACACGATCCACACCCAACCAGTGGGAAAGCAATTT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGGCTTCAGTAAAGGATaGTTGAAATGCCAGATCAGA +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSGFSKG*LKCQIR
Trigger: TCTGATCTGGCATTTCAACCATCCTTTACTGAAGCC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGGACAGAGCATCCACATaGTGTAAGCTACAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWDRAST*CKLQKK
Trigger: CTTCTTTTGTAGCTTACACCATGTGGATGCTCTGTC...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATGAGAACCAAGACAACTaGCCAGCACTTAAACATCCT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNENQDN*PALKHP
Trigger: AGGATGTTTAAGTGCTGGTCAGTTGTCTTGGTTCTC...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCCGACTCCAGAAAAATaGATCCGAGAACCAAGACAA +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNPTPEK*IREPRQ
Trigger: TTGTCTTGGTTCTCGGATTCATTTTTCTGGAGTCGG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTCTGATGGTAATGTACTaGACCCTTACAAGACCTTTC +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILLMVMY*TLTRPF
Trigger: GAAAGGTCTTGTAAGGGTTCAGTACATTACCATCAG...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTCAGTAAAGGATGGTTaGAATGCCAGATCAGATATG +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCSVKDG*NARSDM
Trigger: CATATCTGATCTGGCATTTCAACCATCCTTTACTGA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCATCTTCAAGAGCCAGGTaGTTGTCAGCATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSSSRAR*LSALKS
Trigger: TGATTTTAATGCTGACAAGCACCTGGCTCTTGAAGA...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCTTCATAGCGCACATTaGTTATGTGAACCTCACTGC +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNLHSAH*LCEPHC
Trigger: GCAGTGAGGTTCACATAAGCAATGTGCGCTATGAAG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTTGCGATACAAGTGTATaGTCCAGTATCTTCATAGCG +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILCDTSV*SSIFIA
Trigger: CGCTATGAAGATACTGGAGCATACACTTGTATCGCA...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATGTCTTCATCCACTCCTaGTTCATTCTTTGCGATACA +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHVFIHS*FILCDT
Trigger: TGTATCGCAAAGAATGAAGCAGGAGTGGATGAAGAC...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTGTCTTCATCCACTCCTaGTTCATTCTTTGCGATACA +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILVFIHS*FILCDT
Trigger: TGTATCGCAAAGAATGAAGCAGGAGTGGATGAAGAC...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGACAACTTTTTGGGACTaGACATCAACAATAAGGACT +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMTTFWD*TSTIRT
Trigger: AGTCCTTATTGTTGATGTGCAGTCCCAAAAAGTTGT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCAAAGGATGGTTGAAATaGCAGATCAGATATGTGCAG +
Preference number: 4 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCKGWLK*QIRYVQ
Trigger: CTGCACATATCTGATCTGGCATTTCAACCATCCTTT...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATGCACATCAGTTTGTGTaGTTGAACTACCGTAGATGT +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHAHQFV*LNYRRC
Trigger: ACATCTACGGTAGTTCAAGCACACAAACTGATGTGC...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTTTGTCAAGTTGATATaGGTCCTGTTGGTGAAGCGG +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNFVKLI*VLLVKR
Trigger: CCGCTTCACCAACAGGACCCATATCAACTTGACAAA...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGAATCCAAACCTCATATaGGTGATAATGAGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMNPNLI*VIMSVV
Trigger: CACAACACTCATTATCACCCATATGAGGTTTGGATT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTTCTTCTGCCTTGAGTaGTTCCTTGAGACTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWFFCLE*FLETLY
Trigger: ATAAAGAGTCTCAAGGAACCACTCAAGGCAGAAGAA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATGACAGAGCATCCACATaGTGTAAGCTACAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHDRAST*CKLQKK
Trigger: CTTCTTTTGTAGCTTACACCATGTGGATGCTCTGTC...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCATTTGCTTGAAGCGTaGGTTGTTTGGAAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNHLLEA*VVWKAL
Trigger: CAAAGCTTTCCAAACAACTCACGCTTCAAGCAAATG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGATCAGTTTGTGTGCTTaGACTACCGTAGATGTTATA +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWISLCA*TTVDVI
Trigger: TATAACATCTACGGTAGTTCAAGCACACAAACTGAT...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACAATTGGTAGTTCATTaGGGGTTAAACAAAAGACTG +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSQLVVH*GLNKRL
Trigger: CAGTCTTTTGTTTAACCCTCAATGAACTACCAATTG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCAATTGGTAGTTCATTaGGGGTTAAACAAAAGACTG +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWQLVVH*GLNKRL
Trigger: CAGTCTTTTGTTTAACCCTCAATGAACTACCAATTG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGAATCAAAGAGATCCTTaGCAAGTTCTTCCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMNQRDP*QVLPVL
Trigger: TAAAACAGGAAGAACTTGGCAAGGATCTCTTTGATT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTCTTCAAGAGCCAGGTaGTTGTCAGCATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHSSRAR*LSALKS
Trigger: TGATTTTAATGCTGACAAGCACCTGGCTCTTGAAGA...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCTGGATCACTTGGAATaGTCTATAAAATTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMLDHLE*SIKFFK
Trigger: CTTGAAGAATTTTATAGAGCATTCCAAGTGATCCAG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAACCTCACTGCCATTTaGTTGAAGCGTGAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNNLTAI*LKRELF
Trigger: AAACAACTCACGCTTCAAGCAAATGGCAGTGAGGTT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTGCGATACAAGTGTATaGTCCAGTATCTTCATAGCG +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNCDTSV*SSIFIA
Trigger: CGCTATGAAGATACTGGAGCATACACTTGTATCGCA...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCCTAAGACCAACTTATaGCTTCAATTGGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWPKTNL*LQLVVH
Trigger: ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAAATCCAAACCTCATATaGGTGATAATGAGTGTTGTG +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSNPNLI*VIMSVV
Trigger: CACAACACTCATTATCACCCATATGAGGTTTGGATT...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCACAGACACTTTATATaGTTCATGTTCACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWHRHFI*FMFTRK
Trigger: CTTCCTTGTGAACATGAACCATATAAAGTGTCTGTG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCAGTAAAGGATGGTTaGAATGCCAGATCAGATATG +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNSVKDG*NARSDM
Trigger: CATATCTGATCTGGCATTTCAACCATCCTTTACTGA...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR TCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATATCAGTTTGTGTGCTTaGACTACCGTAGATGTTATA +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHISLCA*TTVDVI
Trigger: TATAACATCTACGGTAGTTCAAGCACACAAACTGAT...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACTGGATCACTTGGAATaGTCTATAAAATTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSLDHLE*SIKFFK
Trigger: CTTGAAGAATTTTATAGAGCATTCCAAGTGATCCAG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTACAACTTTTTGGGACTaGACATCAACAATAAGGACT +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILTTFWD*TSTIRT
Trigger: AGTCCTTATTGTTGATGTGCAGTCCCAAAAAGTTGT...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTTCTTCTGCCTTGAGTaGTTCCTTGAGACTCTTTAT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNFFCLE*FLETLY
Trigger: ATAAAGAGTCTCAAGGAACCACTCAAGGCAGAAGAA...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATACAGTAAATGTCAAGTaGAGTTTGACACCTGTATAC +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHTVNVK*SLTPVY
Trigger: GTATACAGGTGTCAAACTCCACTTGACATTTACTGT...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATCACAGACACTTTATATaGTTCATGTTCACAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHHRHFI*FMFTRK
Trigger: CTTCCTTGTGAACATGAACCATATAAAGTGTCTGTG...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATAATCAAAGAGATCCTTaGCAAGTTCTTCCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHNQRDP*QVLPVL
Trigger: TAAAACAGGAAGAACTTGGCAAGGATCTCTTTGATT...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCCTAAGACCAACTTATaGCTTCAATTGGTAGTTCAT +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNPKTNL*LQLVVH
Trigger: ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATCCACTTTCTATAGCATaGTGCAGATTATACAGTAAA +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHPLSIA*CRLYSK
Trigger: TTTACTGTATAATCTGCAGCATGCTATAGAAAGTGG...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTTCACACAGCTCAGGATaGTATATACACATAAGATAT +
Preference number: 4 (lower is better)
Translates to: LLTTVGLPLYSQLILLILSHSSG*YIHIRY
Trigger: ATATCTTATGTGTATATAGCATCCTGAGCTGTGTGA...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTCACACAGCTCAGGATaGTATATACACATAAGATAT +
Preference number: 4 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHSHSSG*YIHIRY
Trigger: ATATCTTATGTGTATATAGCATCCTGAGCTGTGTGA...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATACAGTAAATGTCAAGTaGAGTTTGACACCTGTATAC +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNTVNVK*SLTPVY
Trigger: GTATACAGGTGTCAAACTCCACTTGACATTTACTGT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR GCA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCCACTTTCTATAGCATaGTGCAGATTATACAGTAAA +
Preference number: 4 (lower is better)
Translates to: IFTYHCRATPLFPTYITNPLSIA*CRLYSK
Trigger: TTTACTGTATAATCTGCAGCATGCTATAGAAAGTGG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS GCA 90 bp GGGTCCCACAGGGCACAGAGGGTGCAAGAGGGCGTTGCCTTCAGGTaGTGGAGCAACTGGTCCGCTCGCGTCTCAGGTTCAGCACCGACA +
Preference number: 5 (lower is better)
Translates to: GSHRAQRVQEGVAFR*WSNWSARVSGSAPT
Trigger: TGTCGGTGCTGAACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 90 bp TTGGTGAAGCGGGTCCCACAGGGCACAGAGGGTGCAAGAGGGCGTTaGCTTCAGGTGCTGGAGCAACTGGTCCGCTCGCGTCTCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LVKRVPQGTEGARGR*LQVLEQLVRSRLRF
Trigger: GAACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCCGCTTCACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 90 bp TCCCACAGGGCACAGAGGGTGCAAGAGGGCGTTGCCTTCAGGTGCTaGAGCAACTGGTCCGCTCGCGTCTCAGGTTCAGCACCGACAGCA +
Preference number: 5 (lower is better)
Translates to: SHRAQRVQEGVAFRC*SNWSARVSGSAPTA
Trigger: TGCTGTCGGTGCTGAACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 90 bp GATATGGGTCCTGTTGGTGAAGCGGGTCCCACAGGGCACAGAGGGTaGAAGAGGGCGTTGCCTTCAGGTGCTGGAGCAACTGGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: DMGPVGEAGPTGHRG*KRALPSGAGATGPL
Trigger: GAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCCGCTTCACCAACAGGACCCATATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 90 bp GCACAGAGGGTGCAAGAGGGCGTTGCCTTCAGGTGCTGGAGCAACTaGTCCGCTCGCGTCTCAGGTTCAGCACCGACAGCACAGTGGACA +
Preference number: 5 (lower is better)
Translates to: AQRVQEGVAFRCWSN*SARVSGSAPTAQWT
Trigger: TGTCCACTGTGCTGTCGGTGCTGAACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 90 bp GACTCTCTCCCACGTCCGATACCACACTCCTTTGTCAAGTTGATATaGGTCCTGTTGGTGAAGCGGGTCCCACAGGGCACAGAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: DSLPRPIPHSFVKLI*VLLVKRVPQGTEGA
Trigger: TGCACCCTCTGTGCCCTGTGGGACCCGCTTCACCAACAGGACCCATATCAACTTGACAAAGGAGTGTGGTATCGGACGTGGGAGAGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 90 bp AGCAACTGGTCCGCTCGCGTCTCAGGTTCAGCACCGACAGCACAGTaGACAGTACCAGCTCCTTTCACCTCCAGTTTGTCTCAGTCACTG +
Preference number: 5 (lower is better)
Translates to: SNWSARVSGSAPTAQ*TVPAPFTSSLSQSL
Trigger: CAGTGACTGAGACAAACTGGAGGTGAAAGGAGCTGGTACTGTCCACTGTGCTGTCGGTGCTGAACCTGAGACGCGAGCGGACCAGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427802.2
CDS TCA 90 bp ACTCTGTCAAATTGCTTTCCCACTGGTTGGGTGTGGATCGTGTGGTaGGGCACATTCCCACTGGCCAGGGTAATTACCTGTAGTGTTGGT +
Preference number: 5 (lower is better)
Translates to: TLSNCFPTGWVWIVW*GTFPLARVITCSVG
Trigger: ACCAACACTACAGGTAATTACCCTGGCCAGTGGGAATGTGCCTCACCACACGATCCACACCCAACCAGTGGGAAAGCAATTTGACAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 90 bp AGAGACATATGGAGTGCCCGTCACATCACTATTGAACCCAATGACTaGGTCAGTTACACCGTCCACCATGACCTGTGGGGAAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RDIWSARHITIEPND*VSYTVHHDLWGNCS
Trigger: GGAGCAGTTTCCCCACAGGTCATGGTGGACGGTGTAACTGACTCAGTCATTGGGTTCAATAGTGATGTGACGGGCACTCCATATGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 90 bp CACAGGTTTGTAGTGACGTTTGCAAAGGTCCATACAGGCACATTCTaGTTGCCCTGTCTCTCTGCTGGTAACACAGTGTCTTCCCAAACC +
Preference number: 5 (lower is better)
Translates to: HRFVVTFAKVHTGTF*LPCLSAGNTVSSQT
Trigger: GGTTTGGGAAGACACTGTGTTACCAGCAGAGAGACAGGGCAAGCAGAATGTGCCTGTATGGACCTTTGCAAACGTCACTACAAACCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 90 bp CATAGAATTCTCCGTCAGATCCACACACAGGTTTGTAGTGACGTTTaGAAAGGTCCATACAGGCACATTCTGCTTGCCCTGTCTCTCTGC +
Preference number: 5 (lower is better)
Translates to: HRILRQIHTQVCSDV*KGPYRHILLALSLC
Trigger: GCAGAGAGACAGGGCAAGCAGAATGTGCCTGTATGGACCTTTGCAAACGTCACTACAAACCTGTGTGTGGATCTGACGGAGAATTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGGGTGCAAGAGGGCGTaGCCTTCAGGTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSGCKRA*PSGAGA
Trigger: TGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS TCA 90 bp ATAGTTTGGTCTAAAACTATAGAAATCTCCAAAGTCACGCCTGAATaGGCGCCCAGGTGGCAAACAGAGGACTCTCTCCCACGTCCGATA +
Preference number: 5 (lower is better)
Translates to: IVWSKTIEISKVTPE*APRWQTEDSLPRPI
Trigger: TATCGGACGTGGGAGAGAGTCCTCTGTTTGCCACCTGGGCGCTCATTCAGGCGTGACTTTGGAGATTTCTATAGTTTTAGACCAAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 90 bp CCATCTAGGATGAAGAGAGAGTCCTTGGAAGGTGTCATCAGGTATTaGCCAAACAAGCCACTGTCCTGGATTTGCCTGTTTTTCCGGTTC +
Preference number: 5 (lower is better)
Translates to: PSRMKRESLEGVIRY*PNKPLSWICLFFRF
Trigger: GAACCGGAAAAACAGGCAAATCCAGGACAGTGGCTTGTTTGGTCAATACCTGATGACACCTTCCAAGGACTCTCTCTTCATCCTAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 90 bp ACTGTCCTGGATTTGCCTGTTTTTCCGGTTCCAAGGCCATTCTTCTaGCTTGAGTGGTTCCTTGAGACTCTTTATCATCTTGACCTTCCC +
Preference number: 5 (lower is better)
Translates to: TVLDLPVFPVPRPFF*LEWFLETLYHLDLP
Trigger: GGGAAGGTCAAGATGATAAAGAGTCTCAAGGAACCACTCAAGGCAGAAGAATGGCCTTGGAACCGGAAAAACAGGCAAATCCAGGACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 90 bp GAAAGCTTTGGTGTAATATCAATTCCATTCTTCAACCAGCCAAGCTaGGGCTTTGGTATGCCCTCTGCATGGCACCTAAGACTGGCAGTT +
Preference number: 5 (lower is better)
Translates to: ESFGVISIPFFNQPS*GFGMPSAWHLRLAV
Trigger: AACTGCCAGTCTTAGGTGCCATGCAGAGGGCATACCAAAGCCTCAGCTTGGCTGGTTGAAGAATGGAATTGATATTACACCAAAGCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 90 bp GATTTGCCTGTTTTTCCGGTTCCAAGGCCATTCTTCTGCCTTGAGTaGTTCCTTGAGACTCTTTATCATCTTGACCTTCCCAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: DLPVFPVPRPFFCLE*FLETLYHLDLPRRE
Trigger: CTCTCTTCTGGGAAGGTCAAGATGATAAAGAGTCTCAAGGAACCACTCAAGGCAGAAGAATGGCCTTGGAACCGGAAAAACAGGCAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATGGGTGCAAGAGGGCGTaGCCTTCAGGTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNGCKRA*PSGAGA
Trigger: TGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCC...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTTGATATGGGTCCTGTaGGTGAAGCGGGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMLIWVL*VKRVPQ
Trigger: CTGTGGGACCCGCTTCACCAACAGGACCCATATCAA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS TCA 90 bp ATAATATTGTTCCTTTTCCAGATAATGGGAGGTCTCAGGGTTCCTTaGATGGCACAGCTCAGAACAGCACTTTGTCCCACAGTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: IILFLFQIMGGLRVP*MAQLRTALCPTVAA
Trigger: TGCAGCAACTGTGGGACAAAGTGCTGTTCTGAGCTGTGCCATTCAAGGAACCCTGAGACCTCCCATTATCTGGAAAAGGAACAATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
ENST00000511170.1
CDS TCA 90 bp AGTTGGCTGTGCAACATAAATGAACTTGTCTTTGACATTAACAGCTaGTGCCCACACACACCTCTGAACTTCATCTCCCTCAGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: SWLCNINELVFDINS*CPHTPLNFISLSFG
Trigger: CCCAAAGCTGAGGGAGATGAAGTTCAGAGGTGTGTGTGGGCATCAGCTGTTAATGTCAAAGACAAGTTCATTTATGTTGCACAGCCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 90 bp CTTCCCAGAAGAGAGCTCCACAAAGAGCACATCAGTTTGTGTGCTTaGACTACCGTAGATGTTATATTGGTGGGCTTCAGTAAAGGATGG +
Preference number: 5 (lower is better)
Translates to: LPRRELHKEHISLCA*TTVDVILVGFSKGW
Trigger: CCATCCTTTACTGAAGCCCACCAATATAACATCTACGGTAGTTCAAGCACACAAACTGATGTGCTCTTTGTGGAGCTCTCTTCTGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCACAGGCACATTCTGCTaGCCCTGTCTCTCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCTGTFC*PCLSAG
Trigger: ACCAGCAGAGAGACAGGGCAAGCAGAATGTGCCTGT...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGACAGGCACATTCTGCTaGCCCTGTCTCTCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWTGTFC*PCLSAG
Trigger: ACCAGCAGAGAGACAGGGCAAGCAGAATGTGCCTGT...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGGCCATTCTTCTGCCTaGAGTGGTTCCTTGAGACTC +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMGHSSA*SGSLRL
Trigger: GAGTCTCAAGGAACCACTCAAGGCAGAAGAATGGCC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGGCCACTGTCCTGGATTaGCCTGTTTTTCCGGTTCCA +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMATVLD*PVFPVP
Trigger: TGGAACCGGAAAAACAGGCAAATCCAGGACAGTGGC...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACCATATCCTCCTTCTTaGGTTGGCCTTCCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSPYPPS*VGLPSD
Trigger: GTCGGAAGGAAGGCCAACCAAAGAAGGAGGATATGG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCGCTCAGAACAGCACTTaGTCCCACAGTTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCAQNST*SHSCCS
Trigger: ACTGCAGCAACTGTGGGACAAAGTGCTGTTCTGAGC...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTTGCTTTCCCACTGGTaGGGTGTGGATCGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHLLSHW*GVDRVV
Trigger: CACCACACGATCCACACCCAACCAGTGGGAAAGCAA...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAGCCACTGTCCTGGATTaGCCTGTTTTTCCGGTTCCA +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSATVLD*PVFPVP
Trigger: TGGAACCGGAAAAACAGGCAAATCCAGGACAGTGGC...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS CCA 90 bp AACCTCACTGCCATTTGCTTGAAGCGTGAGTTGTTTGGAAAGCTTTaGTGTAATATCAATTCCATTCTTCAACCAGCCAAGCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: NLTAICLKRELFGKL*CNINSILQPAKLRL
Trigger: AAGCCTCAGCTTGGCTGGTTGAAGAATGGAATTGATATTACACCAAAGCTTTCCAAACAACTCACGCTTCAAGCAAATGGCAGTGAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTTGATATGGGTCCTGTaGGTGAAGCGGGTCCCACAG +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNLIWVL*VKRVPQ
Trigger: CTGTGGGACCCGCTTCACCAACAGGACCCATATCAA...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGCACTCCTTTGTCAAGTaGATATGGGTCCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMHSFVK*IWVLLV
Trigger: CACCAACAGGACCCATATCAACTTGACAAAGGAGTG...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTCCATATCCTCCTTCTTaGGTTGGCCTTCCTTCCGAC +
Preference number: 5 (lower is better)
Translates to: LLTTVGLPLYSQLILLILPYPPS*VGLPSD
Trigger: GTCGGAAGGAAGGCCAACCAAAGAAGGAGGATATGG...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTGCTCAGAACAGCACTTaGTCCCACAGTTGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LLTTVGLPLYSQLILLILAQNST*SHSCCS
Trigger: ACTGCAGCAACTGTGGGACAAAGTGCTGTTCTGAGC...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGATCCACTCTGTCAAATaGCTTTCCCACTGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMIHSVK*LSHWLG
Trigger: ACCCAACCAGTGGGAAAGCAATTTGACAGAGTGGAT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCTCACTGCCATTTGCTaGAAGCGTGAGTTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWLTAIC*KRELFG
Trigger: TCCAAACAACTCACGCTTCAAGCAAATGGCAGTGAG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCCTCACTGCCATTTGCTaGAAGCGTGAGTTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCLTAIC*KRELFG
Trigger: TCCAAACAACTCACGCTTCAAGCAAATGGCAGTGAG...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATGGCCATTCTTCTGCCTaGAGTGGTTCCTTGAGACTC +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNGHSSA*SGSLRL
Trigger: GAGTCTCAAGGAACCACTCAAGGCAGAAGAATGGCC...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAAGGTGTCATCAGGTATaGACCAAACAAGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSRCHQV*TKQATV
Trigger: GACAGTGGCTTGTTTGGTCAATACCTGATGACACCT...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS TCA 90 bp TTTGCAGCCAATGAAGTAGTAGCCTCCCAAGTGTGTATATGCCAATaGCTGAGGAACGCACTTATAGTCCTTCAAGTTAATTGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: FAANEVVASQVCICQ*LRNALIVLQVNCLD
Trigger: ATCAAGACAATTAACTTGAAGGACTATAAGTGCGTTCCTCAGTCATTGGCATATACACACTTGGGAGGCTACTACTTCATTGGCTGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTCAAGAGCCAGGTGCTaGTCAGCATTAAAATCATCA +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMSRARC*SALKSS
Trigger: TGATGATTTTAATGCTGACAAGCACCTGGCTCTTGA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTGGAGGAACATTCACTaGGAAGATGTGAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMWRNIH*EDVSLI
Trigger: TATCAGACTCACATCTTCCAAGTGAATGTTCCTCCA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTTGAAGCGTGAGTaGTTTGGAAAGCTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWCLKRE*FGKLWC
Trigger: ACACCAAAGCTTTCCAAACAACTCACGCTTCAAGCA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACTCCTGCTTCATTCTTaGCGATACAAGTGTATGCTC +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSLLLHS*RYKCML
Trigger: GAGCATACACTTGTATCGCAAAGAATGAAGCAGGAG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCCTCCTGCTTCATTCTTaGCGATACAAGTGTATGCTC +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCLLLHS*RYKCML
Trigger: GAGCATACACTTGTATCGCAAAGAATGAAGCAGGAG...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATATCCACTCTGTCAAATaGCTTTCCCACTGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHIHSVK*LSHWLG
Trigger: ACCCAACCAGTGGGAAAGCAATTTGACAGAGTGGAT...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGGCCTTGAGTGGTTCCTaGAGACTCTTTATCATCTTG +
Preference number: 5 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWALSGS*RLFIIL
Trigger: CAAGATGATAAAGAGTCTCAAGGAACCACTCAAGGC...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCAATGAAGAGAGAGTCCTaGGAAGGTGTCATCAGGTAT +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSMKRES*EGVIRY
Trigger: ATACCTGATGACACCTTCCAAGGACTCTCTCTTCAT...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGATGAAGAGAGAGTCCTaGGAAGGTGTCATCAGGTAT +
Preference number: 5 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWMKRES*EGVIRY
Trigger: ATACCTGATGACACCTTCCAAGGACTCTCTCTTCAT...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCAACATCTGTAGGCAGTaGACATCCCAGACAAACTTG +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCNICRQ*TSQTNL
Trigger: CAAGTTTGTCTGGGATGTCAACTGCCTACAGATGTT...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCATCAAGAGCCAGGTGCTaGTCAGCATTAAAATCATCA +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSSRARC*SALKSS
Trigger: TGATGATTTTAATGCTGACAAGCACCTGGCTCTTGA...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCGTGAGTCTGATAGACTaGTTCATAGCCATCTGCATA +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCVSLID*FIAICI
Trigger: TATGCAGATGGCTATGAACAAGTCTATCAGACTCAC...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGGAGGAACATTCACTaGGAAGATGTGAGTCTGATA +
Preference number: 5 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWWRNIH*EDVSLI
Trigger: TATCAGACTCACATCTTCCAAGTGAATGTTCCTCCA...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTGCTTGAAGCGTGAGTaGTTTGGAAAGCTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHCLKRE*FGKLWC
Trigger: ACACCAAAGCTTTCCAAACAACTCACGCTTCAAGCA...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTGCCTGAACAACTTTTaGGGACTGCACATCAACAAT +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCCLNNF*GLHINN
Trigger: ATTGTTGATGTGCAGTCCCAAAAAGTTGTTCAGGCA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCCCGTCACATCACTATaGAACCCAATGACTGAGTCA +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNPVTSL*NPMTES
Trigger: TGACTCAGTCATTGGGTTCAATAGTGATGTGACGGG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCACCGTAGATGTTATATaGGTGGGCTTCAGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCTVDVI*VGFSKG
Trigger: TCCTTTACTGAAGCCCACCAATATAACATCTACGGT...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATAGACTCTTTATCATCTaGACCTTCCCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHRLFII*TFPEES
Trigger: GCTCTCTTCTGGGAAGGTCAAGATGATAAAGAGTCT...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTGCCTTGAGTGGTTCCTaGAGACTCTTTATCATCTTG +
Preference number: 5 (lower is better)
Translates to: LLTTVGLPLYSQLILLILALSGS*RLFIIL
Trigger: CAAGATGATAAAGAGTCTCAAGGAACCACTCAAGGC...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAGGTGTCATCAGGTATaGACCAAACAAGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNRCHQV*TKQATV
Trigger: GACAGTGGCTTGTTTGGTCAATACCTGATGACACCT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS GCA 90 bp ACCGTAGATGTTATATTGGTGGGCTTCAGTAAAGGATGGTTGAAATaGCAGATCAGATATGTGCAGATTTGTGTAAATATCAAAAGCCTC +
Preference number: 5 (lower is better)
Translates to: TVDVILVGFSKGWLK*QIRYVQICVNIKSL
Trigger: GAGGCTTTTGATATTTACACAAATCTGCACATATCTGATCTGGCATTTCAACCATCCTTTACTGAAGCCCACCAATATAACATCTACGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS-3UTR CAA 90 bp CCTTCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGCAATCAAAGAGATCCTaGCCAAGTTCTTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: PSIGSSLRVKQKTEDRIWQSKRS*PSSSCF
Trigger: AAAACAGGAAGAACTTGGCAAGGATCTCTTTGATTG...CCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCACAATCAAAGAGATCCTaGCCAAGTTCTTCCTGTTTT +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSQSKRS*PSSSCF
Trigger: AAAACAGGAAGAACTTGGCAAGGATCTCTTTGATTG...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGACTCAACTGGATCACTaGGAATGCTCTATAAAATTC +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMTQLDH*ECSIKF
Trigger: GAATTTTATAGAGCATTCCAAGTGATCCAGTTGAGT...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTGTGAGTCTGATAGACTaGTTCATAGCCATCTGCATA +
Preference number: 5 (lower is better)
Translates to: LLTTVGLPLYSQLILLILVSLID*FIAICI
Trigger: TATGCAGATGGCTATGAACAAGTCTATCAGACTCAC...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTGCCTGAACAACTTTTaGGGACTGCACATCAACAAT +
Preference number: 5 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHCLNNF*GLHINN
Trigger: ATTGTTGATGTGCAGTCCCAAAAAGTTGTTCAGGCA...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCTCAAGTAGGAGGATTCGTTAGGTTTCAAACTACAGCACATAGTGAGAAGATGTTCAGTAAAGGATGGTaGAAATGCCAGATCAGATAT +
Preference number: 5 (lower is better)
Translates to: SQVGGFVRFQTTAHSEKMFSKGW*KCQIRY
Trigger: ATATCTGATCTGGCATTTCAACCATCCTTTACTGAA...CATCTTCTCACTATGTGCTGTAGTTTGAAACCTAACGAATCCTCCTACTTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTACCGTAGATGTTATATaGGTGGGCTTCAGTAAAGGA +
Preference number: 5 (lower is better)
Translates to: LLTTVGLPLYSQLILLILTVDVI*VGFSKG
Trigger: TCCTTTACTGAAGCCCACCAATATAACATCTACGGT...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCCATCAGTTTGTGTGCTaGAACTACCGTAGATGTTAT +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCHQFVC*NYRRCY
Trigger: ATAACATCTACGGTAGTTCAAGCACACAAACTGATG...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAGACTCTTTATCATCTaGACCTTCCCAGAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNRLFII*TFPEES
Trigger: GCTCTCTTCTGGGAAGGTCAAGATGATAAAGAGTCT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATAACATCTGTAGGCAGTaGACATCCCAGACAAACTTG +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNNICRQ*TSQTNL
Trigger: CAAGTTTGTCTGGGATGTCAACTGCCTACAGATGTT...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCCTGTATTCAGTAGTCTaGCACTTATCTCCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCLYSVV*HLSPLK
Trigger: CTTTAAAGGAGATAAGTGCAAGACTACTGAATACAG...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTTCACATTCTATGGGTaGTATCACTTTGATTCCATC +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCFTFYG*YHFDSI
Trigger: GATGGAATCAAAGTGATACAACCCATAGAATGTGAA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp AAATCTACCTCGCATGTTTCTGCTAAGAAGAAATCTACTGTATCACACAGCTCATCACAGTTTAATTTATaGAGTCGTCCATCTAGGATG +
Preference number: 5 (lower is better)
Translates to: KSTSHVSAKKKSTVSHSSSQFNL*SRPSRM
Trigger: CATCCTAGATGGACGACTCAATAAATTAAACTGTGA...TGAGCTGTGTGATACAGTAGATTTCTTCTTAGCAGAAACATGCGAGGTAGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TCAATTGGTAGTTCATTGAGGGTTAAACAAAAGACTGAAGACAGGATTTGGTGCTCACAGTTTAATTTATaGAGTCGTCCATCTAGGATG +
Preference number: 5 (lower is better)
Translates to: SIGSSLRVKQKTEDRIWCSQFNL*SRPSRM
Trigger: CATCCTAGATGGACGACTCAATAAATTAAACTGTGA...GCACCAAATCCTGTCTTCAGTCTTTTGTTTAACCCTCAATGAACTACCAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTCTTCTGTATTCAGTAGTCTaGCACTTATCTCCTTTAAAG +
Preference number: 5 (lower is better)
Translates to: LLTTVGLPLYSQLILLILLYSVV*HLSPLK
Trigger: CTTTAAAGGAGATAAGTGCAAGACTACTGAATACAG...AAGAATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp TTTGACACCTGTATACAACCTAAGACCAACTTATGCCTTCAATTGGTAGTTCATTTCAGTAAAGGATGGTaGAAATGCCAGATCAGATAT +
Preference number: 5 (lower is better)
Translates to: FDTCIQPKTNLCLQLVVHFSKGW*KCQIRY
Trigger: ATATCTGATCTGGCATTTCAACCATCCTTTACTGAA...ATGAACTACCAATTGAAGGCATAAGTTGGTCTTAGGTTGTATACAGGTGTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATCATCAGTTTGTGTGCTaGAACTACCGTAGATGTTAT +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNHQFVC*NYRRCY
Trigger: ATAACATCTACGGTAGTTCAAGCACACAAACTGATG...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS-3UTR CAA 90 bp ATTTTTACTTACCACTGTCGGGCTACCCCTTTATTCCCAACTTATATTACTAATTTCACATTCTATGGGTaGTATCACTTTGATTCCATC +
Preference number: 5 (lower is better)
Translates to: IFTYHCRATPLFPTYITNFTFYG*YHFDSI
Trigger: GATGGAATCAAAGTGATACAACCCATAGAATGTGAA...ATTAGTAATATAAGTTGGGAATAAAGGGGTAGCCCGACAGTGGTAAGTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000379164.8
CDS CAA 72 bp GCGGGTCCCACAGGGCACAGAGGGTGCAAGAGGGCGTaGCCTTCAGGTGCTGGAGCAACTGGTCCGCTCGCG +
Preference number: 6 (lower is better)
Translates to: AGPTGHRGCKRA*PSGAGATGPLA
Trigger: CGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp CGGGTCCCACAGGGCACAGAGGGTGCAAGAGGGCGTTaGCTTCAGGTGCTGGAGCAACTGGTCCGCTCGCGT +
Preference number: 6 (lower is better)
Translates to: RVPQGTEGARGR*LQVLEQLVRSR
Trigger: ACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp GTTGGTGAAGCGGGTCCCACAGGGCACAGAGGGTGCAAGAGGGCGTaGCCTTCAGGTGCTGGAGCAACTGGTCCGCTCGCGTCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: VGEAGPTGHRGCKRA*PSGAGATGPLASQV
Trigger: AACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCCGCTTCACCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp AGGGCACAGAGGGTGCAAGAGGGCGTTGCCTTCAGGTaGTGGAGCAACTGGTCCGCTCGCGTCTCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: RAQRVQEGVAFR*WSNWSARVSGS
Trigger: TGAACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp CCTGTTGGTGAAGCGGGTCCCACAGGGCACAGAGGGTaGAAGAGGGCGTTGCCTTCAGGTGCTGGAGCAACT +
Preference number: 6 (lower is better)
Translates to: PVGEAGPTGHRG*KRALPSGAGAT
Trigger: AGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCCGCTTCACCAACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 72 bp GTGCAAGAGGGCGTTGCCTTCAGGTGCTGGAGCAACTaGTCCGCTCGCGTCTCAGGTTCAGCACCGACAGCA +
Preference number: 6 (lower is better)
Translates to: VQEGVAFRCWSN*SARVSGSAPTA
Trigger: TGCTGTCGGTGCTGAACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 72 bp GCACAGAGGGTGCAAGAGGGCGTTGCCTTCAGGTGCTaGAGCAACTGGTCCGCTCGCGTCTCAGGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: AQRVQEGVAFRC*SNWSARVSGSA
Trigger: TGCTGAACCTGAGACGCGAGCGGACCAGTTGCTCCAGCACCTGAAGGCAACGCCCTCTTGCACCCTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp CCACGTCCGATACCACACTCCTTTGTCAAGTTGATATGGGTCCTGTaGGTGAAGCGGGTCCCACAGGGCACAGAGGGTGCAAGAGGGCGT +
Preference number: 6 (lower is better)
Translates to: PRPIPHSFVKLIWVL*VKRVPQGTEGARGR
Trigger: ACGCCCTCTTGCACCCTCTGTGCCCTGTGGGACCCGCTTCACCAACAGGACCCATATCAACTTGACAAAGGAGTGTGGTATCGGACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 72 bp TCCGCTCGCGTCTCAGGTTCAGCACCGACAGCACAGTaGACAGTACCAGCTCCTTTCACCTCCAGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: SARVSGSAPTAQ*TVPAPFTSSLS
Trigger: AGACAAACTGGAGGTGAAAGGAGCTGGTACTGTCCACTGTGCTGTCGGTGCTGAACCTGAGACGCGAGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306100.10
ENST00000427802.2
CDS CAA 90 bp ACAGAGGACTCTCTCCCACGTCCGATACCACACTCCTTTGTCAAGTaGATATGGGTCCTGTTGGTGAAGCGGGTCCCACAGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: TEDSLPRPIPHSFVK*IWVLLVKRVPQGTE
Trigger: CTCTGTGCCCTGTGGGACCCGCTTCACCAACAGGACCCATATCAACTTGACAAAGGAGTGTGGTATCGGACGTGGGAGAGAGTCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 72 bp CCACGTCCGATACCACACTCCTTTGTCAAGTTGATATaGGTCCTGTTGGTGAAGCGGGTCCCACAGGGCACA +
Preference number: 6 (lower is better)
Translates to: PRPIPHSFVKLI*VLLVKRVPQGT
Trigger: TGTGCCCTGTGGGACCCGCTTCACCAACAGGACCCATATCAACTTGACAAAGGAGTGTGGTATCGGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp GTCAGTTACACCGTCCACCATGACCTGTGGGGAAACTaGTCCGGTGCTGTCAGGTTTGCAGCCAATGAAGTA +
Preference number: 6 (lower is better)
Translates to: VSYTVHHDLWGN*SGAVRFAANEV
Trigger: TACTTCATTGGCTGCAAACCTGACAGCACCGGAGCAGTTTCCCCACAGGTCATGGTGGACGGTGTAACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp ATACCACACTCCTTTGTCAAGTTGATATGGGTCCTGTaGGTGAAGCGGGTCCCACAGGGCACAGAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: IPHSFVKLIWVL*VKRVPQGTEGA
Trigger: TGCACCCTCTGTGCCCTGTGGGACCCGCTTCACCAACAGGACCCATATCAACTTGACAAAGGAGTGTGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp AATTGCTTTCCCACTGGTTGGGTGTGGATCGTGTGGTaGGGCACATTCCCACTGGCCAGGGTAATTACCTGT +
Preference number: 6 (lower is better)
Translates to: NCFPTGWVWIVW*GTFPLARVITC
Trigger: ACAGGTAATTACCCTGGCCAGTGGGAATGTGCCTCACCACACGATCCACACCCAACCAGTGGGAAAGCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp TGGAGTGCCCGTCACATCACTATTGAACCCAATGACTaGGTCAGTTACACCGTCCACCATGACCTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: WSARHITIEPND*VSYTVHHDLWG
Trigger: TCCCCACAGGTCATGGTGGACGGTGTAACTGACTCAGTCATTGGGTTCAATAGTGATGTGACGGGCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp GGGAAACTGCTCCGGTGCTGTCAGGTTTGCAGCCAATaGAGTAGTAGCCTCCCAAGTGTGTATATGCCAATG +
Preference number: 6 (lower is better)
Translates to: GKLLRCCQVCSQ*SSSLPSVYMPM
Trigger: CATTGGCATATACACACTTGGGAGGCTACTACTTCATTGGCTGCAAACCTGACAGCACCGGAGCAGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp CTCCGTCAGATCCACACACAGGTTTGTAGTGACGTTTaGAAAGGTCCATACAGGCACATTCTGCTTGCCCTG +
Preference number: 6 (lower is better)
Translates to: LRQIHTQVCSDV*KGPYRHILLAL
Trigger: CAGGGCAAGCAGAATGTGCCTGTATGGACCTTTGCAAACGTCACTACAAACCTGTGTGTGGATCTGACGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp GTGACGTTTGCAAAGGTCCATACAGGCACATTCTGCTaGCCCTGTCTCTCTGCTGGTAACACAGTGTCTTCC +
Preference number: 6 (lower is better)
Translates to: VTFAKVHTGTFC*PCLSAGNTVSS
Trigger: GGAAGACACTGTGTTACCAGCAGAGAGACAGGGCAAGCAGAATGTGCCTGTATGGACCTTTGCAAACGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp GGAAGGTGTCATCAGGTATTGACCAAACAAGCCACTGTCCTGGATTaGCCTGTTTTTCCGGTTCCAAGGCCATTCTTCTGCCTTGAGTGG +
Preference number: 6 (lower is better)
Translates to: GRCHQVLTKQATVLD*PVFPVPRPFFCLEW
Trigger: CCACTCAAGGCAGAAGAATGGCCTTGGAACCGGAAAAACAGGCAAATCCAGGACAGTGGCTTGTTTGGTCAATACCTGATGACACCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp GTAGTGACGTTTGCAAAGGTCCATACAGGCACATTCTaGTTGCCCTGTCTCTCTGCTGGTAACACAGTGTCT +
Preference number: 6 (lower is better)
Translates to: VVTFAKVHTGTF*LPCLSAGNTVS
Trigger: AGACACTGTGTTACCAGCAGAGAGACAGGGCAAGCAGAATGTGCCTGTATGGACCTTTGCAAACGTCACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 72 bp TGGCAGACTCAACTGGATCACTTAATTCCACATGTCTaGGGAGGCCTCAGAATCATTGTGGGAGGTGAAAGG +
Preference number: 6 (lower is better)
Translates to: WQTQLDHLIPHV*GGLRIIVGGER
Trigger: CCTTTCACCTCCCACAATGATTCTGAGGCCTCCCCAGACATGTGGAATTAAGTGATCCAGTTGAGTCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511170.1
CDS CAA 72 bp TCTGGAGAGACATATGGAGTGCCCGTCACATCACTATaGAACCCAATGACTGAGTCAGTTACACCGTCCACC +
Preference number: 6 (lower is better)
Translates to: SGETYGVPVTSL*NPMTESVTPST
Trigger: GGTGGACGGTGTAACTGACTCAGTCATTGGGTTCAATAGTGATGTGACGGGCACTCCATATGTCTCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp AGGTTTGTAGTGACGTTTGCAAAGGTCCATACAGGCACATTCTGCTaGCCCTGTCTCTCTGCTGGTAACACAGTGTCTTCCCAAACCACA +
Preference number: 6 (lower is better)
Translates to: RFVVTFAKVHTGTFC*PCLSAGNTVSSQTT
Trigger: TGTGGTTTGGGAAGACACTGTGTTACCAGCAGAGAGACAGGGCAAGCAGAATGTGCCTGTATGGACCTTTGCAAACGTCACTACAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp TCTAAAACTATAGAAATCTCCAAAGTCACGCCTGAATaGGCGCCCAGGTGGCAAACAGAGGACTCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: SKTIEISKVTPE*APRWQTEDSLP
Trigger: TGGGAGAGAGTCCTCTGTTTGCCACCTGGGCGCTCATTCAGGCGTGACTTTGGAGATTTCTATAGTTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp TTCCTTTTCCAGATAATGGGAGGTCTCAGGGTTCCTTaGATGGCACAGCTCAGAACAGCACTTTGTCCCACA +
Preference number: 6 (lower is better)
Translates to: FLFQIMGGLRVP*MAQLRTALCPT
Trigger: TGTGGGACAAAGTGCTGTTCTGAGCTGTGCCATTCAAGGAACCCTGAGACCTCCCATTATCTGGAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
ENST00000511170.1
CDS CCA 72 bp AATGCTGACAAGGTAGTGGCCATCTGGAGAGACATATaGAGTGCCCGTCACATCACTATTGAACCCAATGAC +
Preference number: 6 (lower is better)
Translates to: NADKVVAIWRDI*SARHITIEPND
Trigger: GTCATTGGGTTCAATAGTGATGTGACGGGCACTCCATATGTCTCTCCAGATGGCCACTACCTTGTCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp AAAATCATCCACTCTGTCAAATTGCTTTCCCACTGGTaGGGTGTGGATCGTGTGGTGAGGCACATTCCCACT +
Preference number: 6 (lower is better)
Translates to: KIIHSVKLLSHW*GVDRVVRHIPT
Trigger: AGTGGGAATGTGCCTCACCACACGATCCACACCCAACCAGTGGGAAAGCAATTTGACAGAGTGGATGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp CATCAGGTATTGACCAAACAAGCCACTGTCCTGGATTaGCCTGTTTTTCCGGTTCCAAGGCCATTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: HQVLTKQATVLD*PVFPVPRPFFC
Trigger: GCAGAAGAATGGCCTTGGAACCGGAAAAACAGGCAAATCCAGGACAGTGGCTTGTTTGGTCAATACCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp GGCCATTCTTCTGCCTTGAGTGGTTCCTTGAGACTCTTTATCATCTaGACCTTCCCAGAAGAGAGCTCCACAAAGAGCACATCAGTTTGT +
Preference number: 6 (lower is better)
Translates to: GHSSALSGSLRLFII*TFPEESSTKSTSVC
Trigger: ACAAACTGATGTGCTCTTTGTGGAGCTCTCTTCTGGGAAGGTCAAGATGATAAAGAGTCTCAAGGAACCACTCAAGGCAGAAGAATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp TCCTGGATTTGCCTGTTTTTCCGGTTCCAAGGCCATTCTTCTGCCTaGAGTGGTTCCTTGAGACTCTTTATCATCTTGACCTTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: SWICLFFRFQGHSSA*SGSLRLFIILTFPE
Trigger: TTCTGGGAAGGTCAAGATGATAAAGAGTCTCAAGGAACCACTCAAGGCAGAAGAATGGCCTTGGAACCGGAAAAACAGGCAAATCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp GGTGTAATATCAATTCCATTCTTCAACCAGCCAAGCTaGGGCTTTGGTATGCCCTCTGCATGGCACCTAAGA +
Preference number: 6 (lower is better)
Translates to: GVISIPFFNQPS*GFGMPSAWHLR
Trigger: TCTTAGGTGCCATGCAGAGGGCATACCAAAGCCTCAGCTTGGCTGGTTGAAGAATGGAATTGATATTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp TCTTTGACATTAACAGCTGATGCCCACACACACCTCTaGACTTCATCTCCCTCAGCTTTGGGACAGACTTCA +
Preference number: 6 (lower is better)
Translates to: SLTLTADAHTHL*TSSPSALGQTS
Trigger: TGAAGTCTGTCCCAAAGCTGAGGGAGATGAAGTTCAGAGGTGTGTGTGGGCATCAGCTGTTAATGTCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp TCTGCCTTGAGTGGTTCCTTGAGACTCTTTATCATCTaGACCTTCCCAGAAGAGAGCTCCACAAAGAGCACA +
Preference number: 6 (lower is better)
Translates to: SALSGSLRLFII*TFPEESSTKST
Trigger: TGTGCTCTTTGTGGAGCTCTCTTCTGGGAAGGTCAAGATGATAAAGAGTCTCAAGGAACCACTCAAGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp GATGAAGAGAGAGTCCTTGGAAGGTGTCATCAGGTATaGACCAAACAAGCCACTGTCCTGGATTTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: DEERVLGRCHQV*TKQATVLDLPV
Trigger: AACAGGCAAATCCAGGACAGTGGCTTGTTTGGTCAATACCTGATGACACCTTCCAAGGACTCTCTCTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp AATAATATTGTTCCTTTTCCAGATAATGGGAGGTCTCAGGGTTCCTaGAATGGCACAGCTCAGAACAGCACTTTGTCCCACAGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: NNIVPFPDNGRSQGS*NGTAQNSTLSHSCC
Trigger: GCAGCAACTGTGGGACAAAGTGCTGTTCTGAGCTGTGCCATTCAAGGAACCCTGAGACCTCCCATTATCTGGAAAAGGAACAATATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
ENST00000511170.1
CDS TCA 72 bp ATGAAGAGAGAGTCCTTGGAAGGTGTCATCAGGTATTaGCCAAACAAGCCACTGTCCTGGATTTGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: MKRESLEGVIRY*PNKPLSWICLF
Trigger: AAACAGGCAAATCCAGGACAGTGGCTTGTTTGGTCAATACCTGATGACACCTTCCAAGGACTCTCTCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp GATGACTGGAGGAACATTCACTTGGAAGATGTGAGTCTGATAGACTaGTTCATAGCCATCTGCATAGCAGGTGTAATTGCCAACGTGAGT +
Preference number: 6 (lower is better)
Translates to: DDWRNIHLEDVSLID*FIAICIAGVIANVS
Trigger: ACTCACGTTGGCAATTACACCTGCTATGCAGATGGCTATGAACAAGTCTATCAGACTCACATCTTCCAAGTGAATGTTCCTCCAGTCATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp GAAGATGTGAGTCTGATAGACTTGTTCATAGCCATCTaGATAGCAGGTGTAATTGCCAACGTGAGTTGTGGT +
Preference number: 6 (lower is better)
Translates to: EDVSLIDLFIAI*IAGVIANVSCG
Trigger: ACCACAACTCACGTTGGCAATTACACCTGCTATGCAGATGGCTATGAACAAGTCTATCAGACTCACATCTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
ENST00000511170.1
CDS GCA 72 bp TACAAGTGTATGCTCCAGTATCTTCATAGCGCACATTaGTTATGTGAACCTCACTGCCATTTGCTTGAAGCG +
Preference number: 6 (lower is better)
Translates to: YKCMLQYLHSAH*LCEPHCHLLEA
Trigger: CGCTTCAAGCAAATGGCAGTGAGGTTCACATAAGCAATGTGCGCTATGAAGATACTGGAGCATACACTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp CAGAAGAGAGCTCCACAAAGAGCACATCAGTTTGTGTaGTTGAACTACCGTAGATGTTATATTGGTGGGCTT +
Preference number: 6 (lower is better)
Translates to: QKRAPQRAHQFV*LNYRRCYIGGL
Trigger: AAGCCCACCAATATAACATCTACGGTAGTTCAAGCACACAAACTGATGTGCTCTTTGTGGAGCTCTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp GATTTGCCTGTTTTTCCGGTTCCAAGGCCATTCTTCTaGCTTGAGTGGTTCCTTGAGACTCTTTATCATCTT +
Preference number: 6 (lower is better)
Translates to: DLPVFPVPRPFF*LEWFLETLYHL
Trigger: AAGATGATAAAGAGTCTCAAGGAACCACTCAAGGCAGAAGAATGGCCTTGGAACCGGAAAAACAGGCAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp AAGAGAGCTCCACAAAGAGCACATCAGTTTGTGTGCTaGAACTACCGTAGATGTTATATTGGTGGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: KRAPQRAHQFVC*NYRRCYIGGLQ
Trigger: CTGAAGCCCACCAATATAACATCTACGGTAGTTCAAGCACACAAACTGATGTGCTCTTTGTGGAGCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp AGGAACATTCACTTGGAAGATGTGAGTCTGATAGACTaGTTCATAGCCATCTGCATAGCAGGTGTAATTGCC +
Preference number: 6 (lower is better)
Translates to: RNIHLEDVSLID*FIAICIAGVIA
Trigger: GGCAATTACACCTGCTATGCAGATGGCTATGAACAAGTCTATCAGACTCACATCTTCCAAGTGAATGTTCCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 72 bp GCCATTTGCTTGAAGCGTGAGTTGTTTGGAAAGCTTTaGTGTAATATCAATTCCATTCTTCAACCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: AICLKRELFGKL*CNINSILQPAK
Trigger: CTTGGCTGGTTGAAGAATGGAATTGATATTACACCAAAGCTTTCCAAACAACTCACGCTTCAAGCAAATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 90 bp ACTTTATTGATGTACATTCACTTGGAAGATGTGAGTCTGATAGACTaGTTCATAGCCATCTGCATAGCAGGTGTAATTGCCAACGTGAGT +
Preference number: 6 (lower is better)
Translates to: TLLMYIHLEDVSLID*FIAICIAGVIANVS
Trigger: ACTCACGTTGGCAATTACACCTGCTATGCAGATGGCTATGAACAAGTCTATCAGACTCACATCTTCCAAGTGAATGTACATCAATAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511170.1
CDS TCA 72 bp AATGAAGTAGTAGCCTCCCAAGTGTGTATATGCCAATaGCTGAGGAACGCACTTATAGTCCTTCAAGTTAAT +
Preference number: 6 (lower is better)
Translates to: NEVVASQVCICQ*LRNALIVLQVN
Trigger: ATTAACTTGAAGGACTATAAGTGCGTTCCTCAGTCATTGGCATATACACACTTGGGAGGCTACTACTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS TCA 72 bp AAAGCCTCCTGTATTTCTCCTCTGATGGTAATGTACTaGACCCTTACAAGACCTTTCACATCATTAATGCTG +
Preference number: 6 (lower is better)
Translates to: KASCISPLMVMY*TLTRPFTSLML
Trigger: CAGCATTAATGATGTGAAAGGTCTTGTAAGGGTTCAGTACATTACCATCAGAGGAGAAATACAGGAGGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CCA 72 bp ACCGTAGATGTTATATTGGTGGGCTTCAGTAAAGGATaGTTGAAATGCCAGATCAGATATGTGCAGATTTGT +
Preference number: 6 (lower is better)
Translates to: TVDVILVGFSKG*LKCQIRYVQIC
Trigger: ACAAATCTGCACATATCTGATCTGGCATTTCAACCATCCTTTACTGAAGCCCACCAATATAACATCTACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp AGGATGGTTGAAATGCCAGATCAGATATGTGCAGATTaGTGTAAATATCAAAAGCCTCCTGTATTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: RMVEMPDQICAD*CKYQKPPVFLL
Trigger: GAGGAGAAATACAGGAGGCTTTTGATATTTACACAAATCTGCACATATCTGATCTGGCATTTCAACCATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS CAA 72 bp GTAGATGTTATATTGGTGGGCTTCAGTAAAGGATGGTaGAAATGCCAGATCAGATATGTGCAGATTTGTGTA +
Preference number: 6 (lower is better)
Translates to: VDVILVGFSKGW*KCQIRYVQICV
Trigger: TACACAAATCTGCACATATCTGATCTGGCATTTCAACCATCCTTTACTGAAGCCCACCAATATAACATCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2
CDS GCA 72 bp TCAATAGAACATACAAAGTACAATCAAAGAGATCCTTaGCAAGTTCTTCCTGTTTTATCACCTGAGTTAGTT +
Preference number: 6 (lower is better)
Translates to: SIEHTKYNQRDP*QVLPVLSPELV
Trigger: AACTAACTCAGGTGATAAAACAGGAAGAACTTGGCAAGGATCTCTTTGATTGTACTTTGTATGTTCTATTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306100.10
ENST00000379164.8
ENST00000427802.2