RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FSTL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000053108

Ensembl transcript IDs: ENST00000265342.12, ENST00000507112.1, ENST00000509525.5, ENST00000510685.1, ENST00000511375.1, ENST00000514998.1, ENST00000621681.4

Found 525 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAAGCAGCTGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATaGGCTTTCAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTC +
Preference number: 1 (lower is better)
Translates to: RSSCEGEDAVPREDG*AFSSGGRPLLLVGL
Trigger: GAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCAGCTGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR TCA 90 bp TCAGGAACTCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTaGGCCTGGAGGCCACCCATACCTTGCCAGGCAAGCCCAGTCTGC +
Preference number: 1 (lower is better)
Translates to: SGTHLAPLVSLGFLH*AWRPPIPCQASPVC
Trigger: GCAGACTGGGCTTGCCTGGCAAGGTATGGGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGAGTTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 90 bp TCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTaGCTGGGTCTGGCAGTAAGGGACAATGACTATGTGAAGGCAACT +
Preference number: 1 (lower is better)
Translates to: SWSASASGPLRQGKV*LGLAVRDNDYVKAT
Trigger: AGTTGCCTTCACATAGTCATTGTCCCTTACTGCCAGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR TCA 90 bp CCTCCCAGTGGCTTTCCAACTGTGTCCCATGAACCTCTGCTGGGGTaGAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCTT +
Preference number: 1 (lower is better)
Translates to: PPSGFPTVSHEPLLG*SMGERAGQSGLPPL
Trigger: AAGAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAGGTTCATGGGACACAGTTGGAAAGCCACTGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 90 bp GTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCAGGATCCCTTaGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACA +
Preference number: 1 (lower is better)
Translates to: VKATDRGVCLESRIP*FHDVPRSLGVQLGT
Trigger: TGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR TCA 90 bp TGGAGAAGCAGGGTGGCAATAGTCGACAGGGCCAGTATTCTCAGATaGCCATTGTTCTTTCTGGCTGTGGGATGTGGGGTTGTGACCACC +
Preference number: 1 (lower is better)
Translates to: WRSRVAIVDRASILR*PLFFLAVGCGVVTT
Trigger: GGTGGTCACAACCCCACATCCCACAGCCAGAAAGAACAATGGTCATCTGAGAATACTGGCCCTGTCGACTATTGCCACCCTGCTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 90 bp CTCATATGTGGGAGAGGGAAGGCGAGCCTGTTTTTGCTGAGTCTCTaGTCTAGGCGGTCTCCAGAGGGCTATGTGGGTTGTACTTCTTCG +
Preference number: 1 (lower is better)
Translates to: LICGRGKASLFLLSL*SRRSPEGYVGCTSS
Trigger: CGAAGAAGTACAACCCACATAGCCCTCTGGAGACCGCCTAGATCAGAGACTCAGCAAAAACAGGCTCGCCTTCCCTCTCCCACATATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 90 bp CGGTCTCCAGAGGGCTATGTGGGTTGTACTTCTTCGATGCCCATGTaGGAGTCACCACAGCCTGAGACACATAAGGAGAATGCAGTAGTG +
Preference number: 1 (lower is better)
Translates to: RSPEGYVGCTSSMPM*ESPQPETHKENAVV
Trigger: CACTACTGCATTCTCCTTATGTGTCTCAGGCTGTGGTGACTCTCACATGGGCATCGAAGAAGTACAACCCACATAGCCCTCTGGAGACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 90 bp AAGTTCCACTCATATGTGGGAGAGGGAAGGCGAGCCTGTTTTTGCTaGGTCTCTGATCTAGGCGGTCTCCAGAGGGCTATGTGGGTTGTA +
Preference number: 1 (lower is better)
Translates to: KFHSYVGEGRRACFC*VSDLGGLQRAMWVV
Trigger: TACAACCCACATAGCCCTCTGGAGACCGCCTAGATCAGAGACTCAGCAAAAACAGGCTCGCCTTCCCTCTCCCACATATGAGTGGAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR GCA 90 bp GATCTAGGCGGTCTCCAGAGGGCTATGTGGGTTGTACTTCTTCGATaGCCATGTGAGAGTCACCACAGCCTGAGACACATAAGGAGAATG +
Preference number: 1 (lower is better)
Translates to: DLGGLQRAMWVVLLR*PCESHHSLRHIRRM
Trigger: CATTCTCCTTATGTGTCTCAGGCTGTGGTGACTCTCACATGGGCATCGAAGAAGTACAACCCACATAGCCCTCTGGAGACCGCCTAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 90 bp TCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATaGTCCCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGC +
Preference number: 1 (lower is better)
Translates to: SMMSPGHSVCSLAQK*SLYTAAYVLIVAQG
Trigger: GCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR TCA 90 bp GCCAGCCTGTGGCCTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTaGTTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCT +
Preference number: 1 (lower is better)
Translates to: ASLWPSVLGSAVCVY*LGNVGKKTLAEMCS
Trigger: AGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 90 bp GCCTGTGGCCTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTaGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCT +
Preference number: 1 (lower is better)
Translates to: ACGLLFWVLQCVCID*GMWVRKPSPKCVLS
Trigger: AGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTaGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTG +
Preference number: 1 (lower is better)
Translates to: LLFWVLQCVCIDWGM*VRKPSPKCVLSAVL
Trigger: CAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 90 bp ACACATAAGGAGAATGCAGTAGTGCCAGCCTGTGGCCTTCTGTTCTaGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGA +
Preference number: 1 (lower is better)
Translates to: THKENAVVPACGLLF*VLQCVCIDWGMWVR
Trigger: TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGCTGGCACTACTGCATTCTCCTTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 90 bp GCAGAAGTTGACTCTGTCACTCCTGATTATTTTAAAAGGCCAGTTTaGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: AEVDSVTPDYFKRPV*VKLVFDLGILLPRG
Trigger: CCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAACTGGCCTTTTAAAATAATCAGGAGTGACAGAGTCAACTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 90 bp GCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTaGAAGAGTTCATTCCTTAATGGCAAAGGAAAATCCTGGTCATGT +
Preference number: 1 (lower is better)
Translates to: AVCVESDTESRVSSP*KSSFLNGKGKSWSC
Trigger: ACATGACCAGGATTTTCCTTTGCCATTAAGGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR GCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCCGGGAGGGAGGCCCCTaGTCCTGGTCGGCCTCTGCT +
Preference number: 2 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLREGGP*SWSASA
Trigger: AGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCG...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCACTATGTGAAGGCAACTaGCAGAGGTGTCTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSLCEGN*QRCLLG
Trigger: TCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAG...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR GCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGAATGTACAGCGTACCTaGTTGAGGCTGCAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKNVQRT*LRLQCQ
Trigger: CTGACACTGCAGCCTCAAGCAGGTACGCTGTACATT...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR TCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGAGCTTGGCACAGAAATaGTCCCTTTACACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKSLAQK*SLYTAA
Trigger: TGCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCT...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR TCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCGGACTCCTGAAACCCTaGCCTAGGCTTCAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLGLLKP*PRLQAC
Trigger: GCAGGCCTGAAGCCTAGGTCAGGGTTTCAGGAGTCC...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR GCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTAATGTACAGCGTACCTaGTTGAGGCTGCAGTGTCAG +
Preference number: 2 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSNVQRT*LRLQCQ
Trigger: CTGACACTGCAGCCTCAAGCAGGTACGCTGTACATT...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR GCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTACTGACAGAGGTGTCTaGTTGGAGAGCAGGATCCCT +
Preference number: 2 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSTDRGV*LESRIP
Trigger: AGGGATCCTGCTCTCCAAGCAGACACCTCTGTCAGT...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR GCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTACTGACAGAGGTGTCTaGTTGGAGAGCAGGATCCCT +
Preference number: 2 (lower is better)
Translates to: LLLVGLCFRATPSGQSLATDRGV*LESRIP
Trigger: AGGGATCCTGCTCTCCAAGCAGACACCTCTGTCAGT...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGACTCGGTGTGCAGCTTaGCACAGAAATGATCCCTTT +
Preference number: 2 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKTRCAA*HRNDPF
Trigger: AAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGT...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTACAGAGGTGTCTGCTTaGAGAGCAGGATCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: LLLVGLCFRATPSGQSLATEVSA*RAGSLG
Trigger: ACCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGT...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR CAA 90 bp TTCAGGAACTCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATaGAGCCTGGAGGCCACCCATACCTTGCCAGGCAAGCCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: FRNSPGPTRVLGVSA*SLEATHTLPGKPSL
Trigger: CAGACTGGGCTTGCCTGGCAAGGTATGGGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGAGTTCCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTCAAGGAGACCAGTGTTaGACCACAAAGCGAGTACAG +
Preference number: 2 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAQGDQC*TTKRVQ
Trigger: CTGTACTCGCTTTGTGGTTCAACACTGGTCTCCTTG...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR TCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTCTATGTGAAGGCAACTaGCAGAGGTGTCTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSLCEGN*QRCLLG
Trigger: TCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAG...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCCGTCAGGGCAAAGTCTaGCTGGGTCTGGCAGTAAGG +
Preference number: 2 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLRQGKV*LGLAVR
Trigger: CCTTACTGCCAGACCCAGCCAGACTTTGCCCTGACG...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCGGCCTGGTCTGCTCTTaGAGAAGCAGGGTGGCAATA +
Preference number: 2 (lower is better)
Translates to: SPGPTRVLGVSALSLEATGLVCS*RSRVAI
Trigger: TATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCC...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCGGTGACTTTGCCTCCTaGGGCTGGACTCCTGAAACC +
Preference number: 2 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLGDFAS*GWTPET
Trigger: GGTTTCAGGAGTCCAGCCCCAGGAGGCAAAGTCACC...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp TGCAGTAGTGCCAGCCTGTGGCCTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGGGATGTGGGGTTGTaGCCACCCCCGAGACTCGGC +
Preference number: 2 (lower is better)
Translates to: CSSASLWPSVLGSAVCVYWDVGL*PPPRLG
Trigger: GCCGAGTCTCGGGGGTGGTCACAACCCCACATCCCA...ATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGCTGGCACTACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR GCA 90 bp GTTTGGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGGGCTCGTCTGCGAGGGAGAAGATaGGGTCCCACGCGAGGACGG +
Preference number: 2 (lower is better)
Translates to: VWVKLVFDLGILLPRGARLRGRR*GPTRGR
Trigger: CCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCAG...ACGAGCCCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp AAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGGGTACCGTCTCCCTTCTGTGCTaGAAGGAGGCACACAGAACT +
Preference number: 2 (lower is better)
Translates to: KPSPKCVLSAVLMRGWGTVSLLC*KEAHRT
Trigger: AGTTCTGTGTGCCTCCTTTCAGCACAGAAGGGAGAC...GGTACCCCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR GCA 90 bp AGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTCCCCATCCCCCAAGATaGAGTAAGTCTTGTTGGCTC +
Preference number: 2 (lower is better)
Translates to: RTESLRMRWPGLLLEKQGPHPPR*SKSCWL
Trigger: GAGCCAACAAGACTTACTGCATCTTGGGGGATGGGG...ACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CCA 90 bp GTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGCTTCAGGAACTCACCTaGCCCCACTCGTGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: VRKPSPKCVLSAVLMRGWLQELT*PHSCPW
Trigger: CCAAGGACACGAGTGGGGCCAGGTGAGTTCCTGAAG...CCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTCAAGGAGACCAGTGTTaGACCACAAAGCGAGTACAG +
Preference number: 2 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGQGDQC*TTKRVQ
Trigger: CTGTACTCGCTTTGTGGTTCAACACTGGTCTCCTTG...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGCCACGCGAGGACGGATaGGCTTTCAGTTCGGGAGGG +
Preference number: 2 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMPREDG*AFSSGG
Trigger: CCCTCCCGAACTGAAAGCCCATCCGTCCTCGCGTGG...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CCA 90 bp GTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGACGGATGAGGTGGCCTaGTCTGCTCTTGGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: VRKPSPKCVLSAVLMRGWTDEVA*SALGEA
Trigger: TGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGT...CCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCGATCCCTTGGTTCCATaGTGTCCCCAGGTCACTCGG +
Preference number: 2 (lower is better)
Translates to: VRDNDYVKATDRGVCLESDPLVP*CPQVTR
Trigger: CCGAGTGACCTGGGGACATCATGGAACCAAGGGATC...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR GCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGAAGGCCACCCATACCTTaGCAGGCAAGCCCAGTCTGC +
Preference number: 2 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRRPPIP*QASPVC
Trigger: GCAGACTGGGCTTGCCTGGCAAGGTATGGGTGGCCT...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGAGAGCAGGATCCCTTaGTTCCATGATGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAESRIP*FHDVPR
Trigger: CCTGGGGACATCATGGAACCAAGGGATCCTGCTCTC...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CCA 90 bp ACCCAACCAACTCTATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGAGTTCCACTCATATGTaGGAGAGGGAAGGCGAGCCT +
Preference number: 2 (lower is better)
Translates to: TQPTLLVFLPKGIYLPALSSTHM*EREGEP
Trigger: AGGCTCGCCTTCCCTCTCCCACATATGAGTGGAACT...CAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGAGCTTGGCACAGAAATaGTCCCTTTACACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMSLAQK*SLYTAA
Trigger: TGCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCT...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCTGTGGCCTTCTGTTCTaGGTTCTGCAGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSCGLLF*VLQCVC
Trigger: ACACACACACTGCAGAACCCAGAACAGAAGGCCACA...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCAGGGACAATGACTATGTaGAGGCAACTGACAGAGGTG +
Preference number: 2 (lower is better)
Translates to: KSCWLSLRLTASQMERKAGTMTM*RQLTEV
Trigger: CACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCC...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCACTCGGTGTGCAGCTTaGCACAGAAATGATCCCTTT +
Preference number: 2 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSTRCAA*HRNDPF
Trigger: AAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGT...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCATTGATTGGGGAATGTaGGTAAGAAAACCCTCGCCG +
Preference number: 2 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSIDWGM*VRKPSP
Trigger: CGGCGAGGGTTTTCTTACCCACATTCCCCAATCAAT...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR TCA 90 bp ACCCAACCAACTCTATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGCCAGTATTCTCAGATaGCCATTGTTCTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: TQPTLLVFLPKGIYLPALASILR*PLFFLA
Trigger: AGCCAGAAAGAACAATGGTCATCTGAGAATACTGGC...CAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR GCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGACGGAGAGCATCTTTCTaGTTACTAGCATTTGAGATT +
Preference number: 2 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRRRASF*LLAFEI
Trigger: AATCTCAAATGCTAGTAAGCAGAAAGATGCTCTCCG...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CAA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGTACAGCGTACCTGCTaGAGGCTGCAGTGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRVQRTC*RLQCQD
Trigger: GTCCTGACACTGCAGCCTCAAGCAGGTACGCTGTAC...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CAA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGACAGAGGTGTCTGCTaGGAGAGCAGGATCCCTTGG +
Preference number: 3 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRDRGVC*ESRIPW
Trigger: CCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGTC...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR GCA 72 bp AGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTaGTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: SSGGRPLLLVGL*FRATPSGQSLA
Trigger: AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CAA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGACAGAGGTGTCTGCTaGGAGAGCAGGATCCCTTGG +
Preference number: 3 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSDRGVC*ESRIPW
Trigger: CCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGTC...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CAA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTGTACAGCGTACCTGCTaGAGGCTGCAGTGTCAGGAC +
Preference number: 3 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSVQRTC*RLQCQD
Trigger: GTCCTGACACTGCAGCCTCAAGCAGGTACGCTGTAC...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR CCA 72 bp GCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTaGCTGGGTCTGGCAGTAAGGGACAATGACTATGTG +
Preference number: 3 (lower is better)
Translates to: ASASGPLRQGKV*LGLAVRDNDYV
Trigger: CACATAGTCATTGTCCCTTACTGCCAGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CAA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCGCAAGGAGACCAGTGTaGAACCACAAAGCGAGTACA +
Preference number: 3 (lower is better)
Translates to: SPGPTRVLGVSALSLEATARRPV*NHKAST
Trigger: TGTACTCGCTTTGTGGTTCAACACTGGTCTCCTTGC...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp AGGTGTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATaGTGTCCCCAGGTCACTCGGTGTGCAGCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: RCLLGEQDPLVP*CPQVTRCAAWH
Trigger: GTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR CCA 72 bp GGGTCCCAACACAGAACCGAGTCCTTACGGATGAGGTaGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAAT +
Preference number: 3 (lower is better)
Translates to: GSQHRTESLRMR*PGLLLEKQGGN
Trigger: ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCTGTGTTGGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CAA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCACTAGGGGGTGTTCCTaGGCCCAGGGCTCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: AGVKGAVCVESDTESRVSTRGCS*AQGSAL
Trigger: CAGAGCAGAGCCCTGGGCCAAGGAACACCCCCTAGT...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp GGGAGAGGGAAGGCGAGCCTGTTTTTGCTGAGTCTCTaGTCTAGGCGGTCTCCAGAGGGCTATGTGGGTTGT +
Preference number: 3 (lower is better)
Translates to: GRGKASLFLLSL*SRRSPEGYVGC
Trigger: ACAACCCACATAGCCCTCTGGAGACCGCCTAGATCAGAGACTCAGCAAAAACAGGCTCGCCTTCCCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp GGCTTTCCAACTGTGTCCCATGAACCTCTGCTGGGGTaGAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: GFPTVSHEPLLG*SMGERAGQSGL
Trigger: AAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAGGTTCATGGGACACAGTTGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 72 bp ACTGACAGAGGTGTCTGCTTGGAGAGCAGGATCCCTTaGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAG +
Preference number: 3 (lower is better)
Translates to: TDRGVCLESRIP*FHDVPRSLGVQ
Trigger: CTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR-3UTR CAA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCCTTGGGGTTTCTGCATaGAGCCTGGAGGCCACCCAT +
Preference number: 3 (lower is better)
Translates to: AGVKGAVCVESDTESRVSLGVSA*SLEATH
Trigger: ATGGGTGGCCTCCAGGCTCAATGCAGAAACCCCAAG...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp TCATATGTGGGAGAGGGAAGGCGAGCCTGTTTTTGCTaGGTCTCTGATCTAGGCGGTCTCCAGAGGGCTATG +
Preference number: 3 (lower is better)
Translates to: SYVGEGRRACFC*VSDLGGLQRAM
Trigger: CATAGCCCTCTGGAGACCGCCTAGATCAGAGACTCAGCAAAAACAGGCTCGCCTTCCCTCTCCCACATATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp CCTGCTTCGATTCAGTTGTGTCTGGCATGCTGTCAGTaGGACCTAAGCCTGCCGTCTCCAGGAAATGCACTC +
Preference number: 3 (lower is better)
Translates to: PASIQLCLACCQ*DLSLPSPGNAL
Trigger: GAGTGCATTTCCTGGAGACGGCAGGCTTAGGTCTCACTGACAGCATGCCAGACACAACTGAATCGAAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp TTTGGTGGACCAAGTTGCGTGAGACATACAAGTGATTaGTCTCATGAGATCTGGGGCGGGGGATGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: FGGPSCVRHTSD*SHEIWGGGCRW
Trigger: CCACCTGCATCCCCCGCCCCAGATCTCATGAGATCAATCACTTGTATGTCTCACGCAACTTGGTCCACCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR GCA 72 bp GGTCTCCAGAGGGCTATGTGGGTTGTACTTCTTCGATaGCCATGTGAGAGTCACCACAGCCTGAGACACATA +
Preference number: 3 (lower is better)
Translates to: GLQRAMWVVLLR*PCESHHSLRHI
Trigger: TATGTGTCTCAGGCTGTGGTGACTCTCACATGGGCATCGAAGAAGTACAACCCACATAGCCCTCTGGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 72 bp GAGAATGCAGTAGTGCCAGCCTGTGGCCTTCTGTTCTaGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATG +
Preference number: 3 (lower is better)
Translates to: ENAVVPACGLLF*VLQCVCIDWGM
Trigger: CATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGCTGGCACTACTGCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR-3UTR CAA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCACTAGGGGGTGTTCCTaGGCCCAGGGCTCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFTRGCS*AQGSAL
Trigger: CAGAGCAGAGCCCTGGGCCAAGGAACACCCCCTAGT...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR TCA 72 bp TCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATaGTCCCTTTACACAGCAGCATATGTTCTCATCGTA +
Preference number: 3 (lower is better)
Translates to: SPGHSVCSLAQK*SLYTAAYVLIV
Trigger: TACGATGAGAACATATGCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR TCA 72 bp GAGGGCTATGTGGGTTGTACTTCTTCGATGCCCATGTaGGAGTCACCACAGCCTGAGACACATAAGGAGAAT +
Preference number: 3 (lower is better)
Translates to: EGYVGCTSSMPM*ESPQPETHKEN
Trigger: ATTCTCCTTATGTGTCTCAGGCTGTGGTGACTCTCACATGGGCATCGAAGAAGTACAACCCACATAGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp GTTACAGGGGACAGGCGTTTGGTGGACCAAGTTGCGTaGGACATACAAGTGATTGATCTCATGAGATCTGGG +
Preference number: 3 (lower is better)
Translates to: VTGDRRLVDQVA*DIQVIDLMRSG
Trigger: CCCAGATCTCATGAGATCAATCACTTGTATGTCTCACGCAACTTGGTCCACCAAACGCCTGTCCCCTGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR GCA 72 bp TCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTTaGAAAATGATCATTCAAACCAGGACACATGTAAGT +
Preference number: 3 (lower is better)
Translates to: SVVRPPLPTRVA*KMIIQTRTHVS
Trigger: ACTTACATGTGTCCTGGTTTGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 72 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTaGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGT +
Preference number: 3 (lower is better)
Translates to: LLFWVLQCVCID*GMWVRKPSPKC
Trigger: ACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CCA 72 bp ATTCAAACCAGGACACATGTAAGTTCCACTCATATGTaGGAGAGGGAAGGCGAGCCTGTTTTTGCTGAGTCT +
Preference number: 3 (lower is better)
Translates to: IQTRTHVSSTHM*EREGEPVFAES
Trigger: AGACTCAGCAAAAACAGGCTCGCCTTCCCTCTCCCACATATGAGTGGAACTTACATGTGTCCTGGTTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR TCA 72 bp GTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTaGAAGAGTTCATTCCTTAATGGCAAAGGAAAATCC +
Preference number: 3 (lower is better)
Translates to: VESDTESRVSSP*KSSFLNGKGKS
Trigger: GGATTTTCCTTTGCCATTAAGGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCCTCGGGGGCGAGGCTaGGCTGAACCACTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRPRGRG*AEPLGR
Trigger: CCTTCCAAGTGGTTCAGCTCAGCCTCGCCCCCGAGG...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTTCTCGCCCCGCACTGTaGTCTCCTGCACGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRSRPAL*SPARAA
Trigger: GGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGA...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCATGGGATGTGGGGTTGTaGCCACCCCCGAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSWDVGL*PPPRLG
Trigger: GCCGAGTCTCGGGGGTGGTCACAACCCCACATCCCA...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTGGCGGGGGATGCAGGTaGCTTGGCAGTCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRGGGCR*LGSQAG
Trigger: TCCTGCCTGACTGCCAAGCCACCTGCATCCCCCGCC...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCACCACATCCGGGCCTCTaGTGGTTCCTGGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSPHPGL*WFLGPS
Trigger: GGATGGACCCAGGAACCAGCAGAGGCCCGGATGTGG...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGGGTGTGCGGATGAGGTaGTGGCTCTGGCCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKGVRMR*WLWPVL
Trigger: CAGCACCGGCCAGAGCCAGCACCTCATCCGCACACC...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGACGCAGCCATGGTGGTaGAGGCCGATGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRTQPWW*RPMVLR
Trigger: CCTCAAGACCATCGGCCTGCACCACCATGGCTGCGT...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTCGGGAGGGAGGCCCCTaGTCCTGGTCGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSREGGP*SWSASA
Trigger: AGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCG...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGCACGCAGCCATGGTaGTGCAGGCCGATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSGTQPW*CRPMVL
Trigger: CAAGACCATCGGCCTGCACCACCATGGCTGCGTGCC...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCCACGCGAGGACGGATaGGCTTTCAGTTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRPREDG*AFSSGG
Trigger: CCCTCCCGAACTGAAAGCCCATCCGTCCTCGCGTGG...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGCGGTGCTGGCTTCTGTaGTCACCTGGAGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRRCWLL*SPGDLV
Trigger: GACCAAGTCTCCAGGTGATCACAGAAGCCAGCACCG...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGATCCCTTGGTTCCATaGTGTCCCCAGGTCACTCGG +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRDPLVP*CPQVTR
Trigger: CCGAGTGACCTGGGGACATCATGGAACCAAGGGATC...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGCACTCCAGGCTCCTGTaGCTGGCTCTCTGGATAGAC +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRHSRLL*LALWID
Trigger: GTCTATCCAGAGAGCCAGGCACAGGAGCCTGGAGTG...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCACGACCACAAGGACTCTaGTCAGTGCTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSRPQGL*SVLAGP
Trigger: TGGCCCAGCCAGCACTGAGCAGAGTCCTTGTGGTCG...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCATCCGGGCCTCTGCTaGTTCCTGGGTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRHPGLC*FLGPSI
Trigger: GATGGATGGACCCAGGAACCAGCAGAGGCCCGGATG...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTGCAGGACGTGGGTCTaGAACAGCTGCTCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKCRTWV*NSCSWP
Trigger: CGGCCACGAGCAGCTGTTCCAGACCCACGTCCTGCA...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTATGAGGTGCTGGCTCTaGCCGGTGCTGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRMRCWL*PVLASV
Trigger: CACAGAAGCCAGCACCGGCCAGAGCCAGCACCTCAT...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCTGCCCACCTTCCCCGTaGACAGCTCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSCPPSP*TAPGTA
Trigger: TGCTGTTCCTGGAGCTGTCCACGGGGAAGGTGGGCA...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGCCTGTCGGCACTGGATaGAGAAGTAGCCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKPVGTG*RSSRPG
Trigger: ACCTGGGCGGCTACTTCTTCATCCAGTGCCGACAGG...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTGATCCCTTGGTTCCATaGTGTCCCCAGGTCACTCGG +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRDPLVP*CPQVTR
Trigger: CCGAGTGACCTGGGGACATCATGGAACCAAGGGATC...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCCACTCCAGGCTCCTGTaGCTGGCTCTCTGGATAGAC +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSHSRLL*LALWID
Trigger: GTCTATCCAGAGAGCCAGGCACAGGAGCCTGGAGTG...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTCTGCGAGGGAGAAGATaGGGTCCCACGCGAGGACGG +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSLRGRR*GPTRGR
Trigger: CCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCAG...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTGGAACAGCTGCTCGTaGCCGGAAGCATGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKWNSCS*PEAWQV
Trigger: CACCTGCCATGCTTCCGGCCACGAGCAGCTGTTCCA...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCTTCACCTGCAGGACGTaGGTCTGGAACAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSFTCRT*VWNSCS
Trigger: CGAGCAGCTGTTCCAGACCCACGTCCTGCAGGTGAA...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTGGTGGGTGTGTGCCATaGCCTGGGGCACGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSGGCVP*PGARSH
Trigger: ATGGCTGCGTGCCCCAGGCCATGGCACACACCCACC...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTAGGTCATACAGGGTCTaGATCTCGCCCCGCACTGTG +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRRSYRV*ISPRTV
Trigger: CACAGTGCGGGGCGAGATCCAGACCCTGTATGACCT...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAAGGTCATACAGGGTCTaGATCTCGCCCCGCACTGTG +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSRSYRV*ISPRTV
Trigger: CACAGTGCGGGGCGAGATCCAGACCCTGTATGACCT...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCGTCAGGGCAAAGTCTaGCTGGGTCTGGCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRRQGKV*LGLAVR
Trigger: CCTTACTGCCAGACCCAGCCAGACTTTGCCCTGACG...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGAGGGGCTCGTGTTCTaGTCTGGTAGTTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSEGLVF*SGSWWD
Trigger: GTCCCACCAACTACCAGACCAGAACACGAGCCCCTC...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTCCACATCCGGGCCTCTaGTGGTTCCTGGGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAPHPGL*WFLGPS
Trigger: GGATGGACCCAGGAACCAGCAGAGGCCCGGATGTGG...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTCGCAGGTCAGCACTGTaGTCAGCCCCACGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSRRSAL*SAPRSL
Trigger: CAGTGACCGTGGGGCTGAGCACAGTGCTGACCTGCG...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTTGCAGGACGTGGGTCTaGAACAGCTGCTCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSCRTWV*NSCSWP
Trigger: CGGCCACGAGCAGCTGTTCCAGACCCACGTCCTGCA...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGCGAACACTGCTGATGTaGAGTTCGCTCCCATTGGCT +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRRTLLM*SSLPLA
Trigger: AGCCAATGGGAGCGAACTCCACATCAGCAGTGTTCG...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGTCCAGGTCCACCTTGTaGACTGCAGGATCAGACTTG +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRSRSTL*TAGSDL
Trigger: CAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGA...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTAGGCTCCGAGCAGTGTaGGATGCAGCCAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSRLRAV*DAAKSL
Trigger: GAGGCTTTTGGCTGCATCTCACACTGCTCGGAGCCT...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGCTGGATAGACACGGATaGCTGGCGGCACATTCACCT +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKLDRHG*LAAHSP
Trigger: AGGTGAATGTGCCGCCAGTCATCCGTGTCTATCCAG...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCATACCGAACACTGCTaGTGTGGAGTTCGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRHTEHC*CGVRSH
Trigger: ATGGGAGCGAACTCCACATCAGCAGTGTTCGGTATG...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCATCTTTTCCGTGGGTTTaGGGTGCCTCTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSSFPWV*GASGSH
Trigger: GTGAGATCCAGAGGCACCTCAAACCCACGGAAAAGA...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCTCTTTTCCGTGGGTTTaGGGTGCCTCTGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSSFPWV*GASGSH
Trigger: GTGAGATCCAGAGGCACCTCAAACCCACGGAAAAGA...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTCCTGTCGGCACTGGATaGAGAAGTAGCCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAPVGTG*RSSRPG
Trigger: ACCTGGGCGGCTACTTCTTCATCCAGTGCCGACAGG...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAAGCACAGAGTCTGTaGCACTGTCAACGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRQAQSL*HCQRAA
Trigger: AGCTGCTCGTTGACAGTGTCACAGACTCTGTGCTTG...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAATTGATGAGGAACAGTaGCTCTCGGGCTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSIDEEQ*LSGWCE
Trigger: CTCACACCAGCCCGAGAGTCACTGTTCCTCATCAAT...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTGTCTCCCTTCTGTGCTaGAAGGAGGCACACAGAACT +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRVSLLC*KEAHRT
Trigger: AGTTCTGTGTGCCTCCTTTCAGCACAGAAGGGAGAC...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGACTCCTGAAACCCTaGCCTAGGCTTCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAGLLKP*PRLQAC
Trigger: GCAGGCCTGAAGCCTAGGTCAGGGTTTCAGGAGTCC...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGCGGCACATTCACCTaGAGGACGTGGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAGGTFT*RTWVWN
Trigger: GTTCCAGACCCACGTCCTGCAGGTGAATGTGCCGCC...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCCAGGGGCTGTCAGCTaGAGCACTGACTATGAAGCG +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSPGAVS*STDYEA
Trigger: CGCTTCATAGTCAGTGCTGCAGCTGACAGCCCCTGG...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGTGATCTCCTGCACGTaGAGCCAGGGGCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAVISCT*SQGLSA
Trigger: AGCTGACAGCCCCTGGCTGCACGTGCAGGAGATCAC...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGCCTAGGCTTCAGGCCTaGTTCGATTCAGTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRPRLQA*FDSVVS
Trigger: AGACACAACTGAATCGAAGCAGGCCTGAAGCCTAGG...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTACCAGGAGGCGCTTCTaGGAGGCAGGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSTRRRF*EAGSCL
Trigger: CAGACAAGACCCTGCCTCCCAGAAGCGCCTCCTGGT...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCATAGACACGGATGACTaGCGGCACATTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSIDTDD*RHIHLQ
Trigger: CTGCAGGTGAATGTGCCGCCAGTCATCCGTGTCTAT...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCCGAACACTGCTGATGTaGAGTTCGCTCCCATTGGCT +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSRTLLM*SSLPLA
Trigger: AGCCAATGGGAGCGAACTCCACATCAGCAGTGTTCG...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCTCAGTGAAGGAGCGCTaGAAGGCCAAGTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSSVKER*KAKSEM
Trigger: CATCTCAGACTTGGCCTTCCAGCGCTCCTTCACTGA...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTACAGAGGTGTCTGCTTaGAGAGCAGGATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRTEVSA*RAGSLG
Trigger: ACCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGT...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTTTGGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGGGCTCGTGAGGCTCCAGCTCCCTaGGCCGCCGCTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VWVKLVFDLGILLPRGAREAPAP*AAAARC
Trigger: GCAGCGGGCAGCGGCGGCTCAGGGAGCTGGAGCCTC...ACGAGCCCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAGGGGCGAGGCTGAGCTaGACCACTTGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGGARLS*TTWKAM
Trigger: CATGGCCTTCCAAGTGGTTCAGCTCAGCCTCGCCCC...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTTGGTGGTCACCTTGGTaGTGTACAGGGAATCATCCT +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRWWSPW*CTGNHP
Trigger: AGGATGATTCCCTGTACATCACCAAGGTGACCACCA...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCCTGGAAGGCCAAGTCTaGGATGCCCGAGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSLEGQV*DARVYL
Trigger: CAAATAAACTCGGGCATCTCAGACTTGGCCTTCCAG...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTGAACCTCTGCTGGGGTaGAGTATGGGAGAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSEPLLG*SMGERA
Trigger: TGCCCTTTCTCCCATACTTCACCCCAGCAGAGGTTC...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTGTTCCGGACATTGACTaGAGATACCCACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSVPDID*RYPLAG
Trigger: CCCTGCCAGTGGGTATCTGCAGTCAATGTCCGGAAC...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTGAAATCATCCACTCCTaGAAAGGGTGTGCGGATGAG +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLREIIHS*KGCADE
Trigger: CTCATCCGCACACCCTTTGCAGGAGTGGATGATTTC...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTCCAGGGGCTGTCAGCTaGAGCACTGACTATGAAGCG +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAPGAVS*STDYEA
Trigger: CGCTTCATAGTCAGTGCTGCAGCTGACAGCCCCTGG...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTTTAAGTTCTTCAGCATaGCCACCTTCCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRLSSSA*PPSPWT
Trigger: TGTCCACGGGGAAGGTGGGCATGCTGAAGAACTTAA...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCCTGCGAGGGAGAAGATaGGGTCCCACGCGAGGACGG +
Preference number: 4 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLLRGRR*GPTRGR
Trigger: CCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCAG...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGCCCCATCCCCCAAGATaGAGTAAGTCTTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKPHPPR*SKSCWL
Trigger: GAGCCAACAAGACTTACTGCATCTTGGGGGATGGGG...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGAAATGTGTTCTCTCTaGAGTGCTGATGCGGGGATG +
Preference number: 4 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSEMCSL*SADAGM
Trigger: CATCCCCGCATCAGCACTGCAGAGAGAACACATTTC...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTGGCTGCAGACGGGTCTaGAGTGCCAGAAGGACATTC +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSGCRRV*SARRTF
Trigger: GAATGTCCTTCTGGCACTCCAGACCCGTCTGCAGCC...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGTCTCCTTCTTGGAGTaGCTGCAGACGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAVSFLE*LQTGLE
Trigger: CTCCAGACCCGTCTGCAGCCACTCCAAGAAGGAGAC...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTGACTGTAGGACTTTCTaGGCTTGGATGTCGACCACA +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRDCRTF*AWMSTT
Trigger: TGTGGTCGACATCCAAGCCCAGAAAGTCCTACAGTC...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGACCAGGAAGTTCAGGGTaGGCCCGTTGCGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGPGSSG*ARCASR
Trigger: TCTGGAAGCGCAACGGGCTCACCCTGAACTTCCTGG...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTAGGCCAAGTCTGAGATaGCCGAGTTTATTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRRPSLR*PSLFAG
Trigger: ACCTGCAAATAAACTCGGGCATCTCAGACTTGGCCT...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTTAAGTTCTTCAGCATaGCCACCTTCCCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKLSSSA*PPSPWT
Trigger: TGTCCACGGGGAAGGTGGGCATGCTGAAGAACTTAA...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCCTTGGCCCAGGGCTCTaGTCTGGGCCCTTCATACCT +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSALSLEATLGPGL*SGPFIP
Trigger: AGGTATGAAGGGCCCAGAGCAGAGCCCTGGGCCAAG...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTGTTGTACTTCTTCGATaGCCATGTGAGAGTCACCAC +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRVVLLR*PCESHH
Trigger: GTGGTGACTCTCACATGGGCATCGAAGAAGTACAAC...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATGGGTCCCGGGCTCGCTaGAGGCTGTTGAGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNGSRAR*RLLRLQ
Trigger: CTGGAGCCTCAACAGCCTCCAGCGAGCCCGGGACCC...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTTCCAGATGATTGGTaGCCTCAGGTCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSLPDDW*PQVSMD
Trigger: GTCCATGGAGACCTGAGGCCACCAATCATCTGGAAG...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGGGAGTTCGCTCCCATTaGCTAAAAGGGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKGVRSH*LKGRAV
Trigger: AACAGCTCTCCCTTTTAGCCAATGGGAGCGAACTCC...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTACTCGGTGTGCAGCTTaGCACAGAAATGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: VREGGPCSWSASASGPLRTRCAA*HRNDPF
Trigger: AAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGT...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTACAGAGGTGTCTGCTTaGAGAGCAGGATCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSTEVSA*RAGSLG
Trigger: ACCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGT...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGCGATTCAGTTGTGTCTaGCATGCTGTCAGTGAGACC +
Preference number: 4 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKRFSCV*HAVSET
Trigger: GGTCTCACTGACAGCATGCCAGACACAACTGAATCG...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTAGCTGTTTGGACATCTaGGTTGAGACATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSSCLDI*VETSTP
Trigger: CGGCGTGGATGTCTCAACTCAGATGTCCAAACAGCT...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCTTCTCTCTGCAGTGCTaGTGCGGGGATGGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSALSLEATFSLQC*CGDGVP
Trigger: TGGTACCCCATCCCCGCATCAGCACTGCAGAGAGAA...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCCCAACCCGTGTGGCTTaGAAAATGATCATTCAAACC +
Preference number: 4 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSPTRVA*KMIIQT
Trigger: GGTTTGAATGATCATTTTGCAAGCCACACGGGTTGG...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTTCACAGTCCACAGGATaGATGACGATGATACCGTCG +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSSQSTG*MTMIPS
Trigger: CGACGGTATCATCGTCATCCATCCTGTGGACTGTGA...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGTTTGAGGTGCCTCTaGATCTCACAGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAGLRCL*ISQSTG
Trigger: TCCTGTGGACTGTGAGATCCAGAGGCACCTCAAACC...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGCATTTCCTCCCAGTaGCTTTCCAACTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAGISSQ*LSNCVP
Trigger: TGGGACACAGTTGGAAAGCCACTGGGAGGAAATGCC...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCAGGAGGATTACCGGCTaGGCTTGCTACAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLRRITG*ACYRRP
Trigger: GGGCCTCCTGTAGCAAGCCCAGCCGGTAATCCTCCT...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
3UTR CAA 72 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATaGAGCCTGGAGGCCACCCATACCTTGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSA*SLEATHTLPGK
Trigger: CTTGCCTGGCAAGGTATGGGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCTCTCGCCCCGCACTGTaGTCTCCTGCACGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSSRPAL*SPARAA
Trigger: GGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGA...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTTTCTGGGCATGGGAATaGCCTCAGCATGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSFWAWE*PQHGIL
Trigger: TAAGATGCCATGCTGAGGGCATTCCCATGCCCAGAA...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAGTTCCGGACATTGACTaGAGATACCCACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGVPDID*RYPLAG
Trigger: CCCTGCCAGTGGGTATCTGCAGTCAATGTCCGGAAC...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TTTGGGGTCCCAACACAGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTATCTGGGGCGGGGGATaGAGGTGGCTTGGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FGVPTQNRVLTDEVAWSAIWGGG*RWLGSQ
Trigger: CTGACTGCCAAGCCACCTGCATCCCCCGCCCCAGAT...AGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCTGTGTTGGGACCCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAGCCAGCAGCTCGTTGTaGCTGGAAAGCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGASSSL*LESPSL
Trigger: AAGAGAAGGGCTTTCCAGCCACAACGAGCTGCTGGC...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp AGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTCATGCCTCCAGGCACTaGCATTCGGGCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RTESLRMRWPGLLLEKQGHASRH*HSGSPV
Trigger: GACAGGGGAGCCCGAATGCCAGTGCCTGGAGGCATG...ACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATGGCCTCAGGTCTCCATaGACGGCGCAGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNGLRSP*TAQVST
Trigger: AGTGCTGACCTGCGCCGTCCATGGAGACCTGAGGCC...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCGTGTGTGCCATGGCCTaGGGCACGCAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSVCAMA*GTQPWW
Trigger: CCACCATGGCTGCGTGCCCCAGGCCATGGCACACAC...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp ATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAGGTGGGTGTGTGCCATaGCCTGGGGCACGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: IPWFHDVPRSLGVQLGTEGGCVP*PGARSH
Trigger: ATGGCTGCGTGCCCCAGGCCATGGCACACACCCACC...TTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTAGACACATTCCAAGATaGAAGGGACAGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLARHIPR*KGQWGR
Trigger: TCTCCCCCACTGTCCCTTCCATCTTGGAATGTGTCT...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTCCTCTCCAAAGTCATTaGTGTCTTCCAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSPLQSH*CLPSPG
Trigger: TCCTGGACTTGGAAGACATCAATGACTTTGGAGAGG...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGTTTCTTCATAGCTCATaGAAATCTTTTCCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRFLHSS*KSFPWV
Trigger: AACCCACGGAAAAGATTTTCATGAGCTATGAAGAAA...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTCCACACTTGGTCATGTaGCTTGTCATAGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSPHLVM*LVIGQL
Trigger: AAGCTGTCCTATGACAAGTCACATGACCAAGTGTGG...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTAGCTTGGCACAGAAATaGTCCCTTTACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLVGLCFRATPSGQSLASLAQK*SLYTAA
Trigger: TGCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCT...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGACTGGGGTACCAGACCTaGCTAATGAGATGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGLGYQT*LMRCLP
Trigger: AGGGAGACATCTCATTAGTCAGGTCTGGTACCCCAG...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp AGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTCTGGGGCTGGACTCCTaGAACCCTGACCTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RTESLRMRWPGLLLEKQGLGLDS*NPDLGF
Trigger: GAAGCCTAGGTCAGGGTTTCAGGAGTCCAGCCCCAG...ACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp ATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGTGACTTTGCCTCCTCCCTGAGCCGCCGCTaGCCGCTGCTGTGCCACCGC +
Preference number: 4 (lower is better)
Translates to: IGFPAKRHLPPCIGDFASSLSRR*PLLCHR
Trigger: GCGGTGGCACAGCAGCGGGCAGCGGCGGCTCAGGGA...GGAGGCAAAGTCACCAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATGGCGGCACATTCACCTaGAGGACGTGGGTCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNGGTFT*RTWVWN
Trigger: GTTCCAGACCCACGTCCTGCAGGTGAATGTGCCGCC...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAAAGGACTCTGCTCAGTaGTGGCTGGGCCACATAGAT +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGKDSAQ*WLGHID
Trigger: ATCTATGTGGCCCAGCCAGCACTGAGCAGAGTCCTT...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTGTCCACCTTGTGGACTaGAGGATCAGACTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSVHLVD*RIRLVE
Trigger: TTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGAC...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCCGGGAGGGAGGCCCCTaGTCCTGGTCGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESREGGP*SWSASA
Trigger: AGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCG...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTCCAGGTGGCCGGACTTaGGCGGGAGGGAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAPGGRT*AGGREH
Trigger: GTGCTCCCTCCCTCCCGCCCAAGTCCGGCCACCTGG...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGACAGGGCCAGTATTCTCGCCTCTGCTGGTTCCTaGGTCCATCCATCCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LVCSWRSRVAIVDRASILASAGS*VHPSQR
Trigger: GCGCTGGGATGGATGGACCCAGGAACCAGCAGAGGC...GAGAATACTGGCCCTGTCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTAAACAGTCCTTGCTGTaGATGACGGTGATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSKQSLL*MTVILF
Trigger: AAAGAGGATCACCGTCATCCACAGCAAGGACTGTTT...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCGGCCTCAGGTCTCCATaGACGGCGCAGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSGLRSP*TAQVST
Trigger: AGTGCTGACCTGCGCCGTCCATGGAGACCTGAGGCC...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCATAGACACGGATGACTaGCGGCACATTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSALSLEATIDTDD*RHIHLQ
Trigger: CTGCAGGTGAATGTGCCGCCAGTCATCCGTGTCTAT...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAACTGCAGATACCCACTaGCAGGGCTGGGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGTADTH*QGWVAF
Trigger: AAATGCAACCCAGCCCTGCCAGTGGGTATCTGCAGT...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCGAGAGCAGGATCCCTTaGTTCCATGATGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLESRIP*FHDVPR
Trigger: CCTGGGGACATCATGGAACCAAGGGATCCTGCTCTC...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAAGTTCCACTCATATGTaGGAGAGGGAAGGCGAGCCT +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGSSTHM*EREGEP
Trigger: AGGCTCGCCTTCCCTCTCCCACATATGAGTGGAACT...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTCCCCTGTCTTCCTGCTaGGCACGCACCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAPLSSC*ARTGSL
Trigger: GAGGGAGCCGGTGCGTGCTCAGCAGGAAGACAGGGG...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TTTGGGGTCCCAACACAGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCGTTGCGCTTCCAGATaGTTGGTGGCCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: FGVPTQNRVLTDEVAWSARCASR*LVASGL
Trigger: GAGACCTGAGGCCACCAATCATCTGGAAGCGCAACG...AGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCTGTGTTGGGACCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp ATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAACCAGGAAGTTCAGGGTaGGCCCGTTGCGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: IPWFHDVPRSLGVQLGTEPGSSG*ARCASR
Trigger: TCTGGAAGCGCAACGGGCTCACCCTGAACTTCCTGG...TTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGACGTTTTTCAGCCAAGTaGTTCTGGGCATGGGAATGC +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGRFSAK*FWAWEC
Trigger: GCATTCCCATGCCCAGAATCACTTGGCTGAAAAACG...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATACATGTTTCCCACGCTaGGGCCTTCCTCTCGCCACA +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNTCFPR*GLPLAT
Trigger: TGTGGCGAGAGGAAGGCCTCAGCGTGGGAAACATGT...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp AGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTCGGTGCTGGCTTCTGTaGTCACCTGGAGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: RTESLRMRWPGLLLEKQGRCWLL*SPGDLV
Trigger: GACCAAGTCTCCAGGTGATCACAGAAGCCAGCACCG...ACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAATTGATTGCTTTCAGTaGAGGAGCGCTGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGIDCFQ*RSAGRP
Trigger: TGGCCTTCCAGCGCTCCTTCACTGAAAGCAATCAAT...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGACTATGTGAAGGCAACTaGCAGAGGTGTCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGLCEGN*QRCLLG
Trigger: TCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAG...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TTTGGGGTCCCAACACAGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTAAGCCCAGTCTGCCCTaGATCTGGGGTACCAGACCT +
Preference number: 4 (lower is better)
Translates to: FGVPTQNRVLTDEVAWSAKPSLP*IWGTRP
Trigger: AGGTCTGGTACCCCAGATTCAGGGCAGACTGGGCTT...AGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCTGTGTTGGGACCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCCGACCACAAGGACTCTaGTCAGTGCTGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSRPQGL*SVLAGP
Trigger: TGGCCCAGCCAGCACTGAGCAGAGTCCTTGTGGTCG...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GTTTGGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGGGCTCGTCGCACTGTGATCTCCTaGACGTGCAGCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VWVKLVFDLGILLPRGARRTVIS*TCSQGL
Trigger: CAGCCCCTGGCTGCACGTGCAGGAGATCACAGTGCG...ACGAGCCCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCTGGAACAGCTGCTCGTaGCCGGAAGCATGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSWNSCS*PEAWQV
Trigger: CACCTGCCATGCTTCCGGCCACGAGCAGCTGTTCCA...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCAGGACTTTCTGGGCTTaGATGTCGACCACAAGGACT +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSALSLEATRTFWA*MSTTRT
Trigger: AGTCCTTGTGGTCGACATCCAAGCCCAGAAAGTCCT...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCATGAGGTGCTGGCTCTaGCCGGTGCTGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSMRCWL*PVLASV
Trigger: CACAGAAGCCAGCACCGGCCAGAGCCAGCACCTCAT...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTCGTCAGGGCAAAGTCTaGCTGGGTCTGGCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGRQGKV*LGLAVR
Trigger: CCTTACTGCCAGACCCAGCCAGACTTTGCCCTGACG...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATGGTGACTTTGCCTCCTaGGGCTGGACTCCTGAAACC +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNGDFAS*GWTPET
Trigger: GGTTTCAGGAGTCCAGCCCCAGGAGGCAAAGTCACC...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCCAAAGGGTGTGCGGATaGGGTGCTGGCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESQRVCG*GAGSGR
Trigger: CCGGCCAGAGCCAGCACCTCATCCGCACACCCTTTG...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGCAGGCCGATGGTCTTaGGGGGCATCATTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGAGRWS*GASLFP
Trigger: TGGAAACAATGATGCCCCTCAAGACCATCGGCCTGC...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAAGCTTGGCACAGAAATaGTCCCTTTACACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGSLAQK*SLYTAA
Trigger: TGCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCT...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCGCATCCCAGCTACTGTaGAACTGCATTCTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSALSLEATASQLL*NCILGF
Trigger: AAAGCCTAGAATGCAGTTTCACAGTAGCTGGGATGC...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCGGTCAAACTGGTCTTTaGCTTAGGAATCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLGQTGL*LRNPAA
Trigger: GGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACC...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TTTGGGGTCCCAACACAGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCCAGGAAATGCACTCTaGGGACAGCAAAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FGVPTQNRVLTDEVAWSAPGNAL*GQQRAA
Trigger: AGCTGCCCTTTGCTGTCCTCAGAGTGCATTTCCTGG...AGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCTGTGTTGGGACCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTTCCGTGGGTTTGAGGTaGCTCTGGATCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGSVGLR*LWISQS
Trigger: GGACTGTGAGATCCAGAGGCACCTCAAACCCACGGA...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATGCCAGCAGCTCGTTGTaGCTGGAAAGCCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNASSSL*LESPSL
Trigger: AAGAGAAGGGCTTTCCAGCCACAACGAGCTGCTGGC...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp ATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAGTCGGGGGATGTGTGTaGGGTGCCTGTTACATCACC +
Preference number: 4 (lower is better)
Translates to: IPWFHDVPRSLGVQLGTEVGGCV*GACYIT
Trigger: GGTGATGTAACAGGCACCCCACACACATCCCCCGAC...TTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGTGCCCACCTTCCCCGTaGACAGCTCCAGGAACAGCA +
Preference number: 4 (lower is better)
Translates to: VRKPSPKCVLSAVLMRGWCPPSP*TAPGTA
Trigger: TGCTGTTCCTGGAGCTGTCCACGGGGAAGGTGGGCA...CCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGGCCTGGTCTGCTCTTaGAGAAGCAGGGTGGCAATA +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGGLVCS*RSRVAI
Trigger: TATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCC...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TTTGGGGTCCCAACACAGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTTCCTTACGGATGAGGTaGCCTGGTCTGCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: FGVPTQNRVLTDEVAWSASLRMR*PGLLLE
Trigger: CTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGA...AGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCTGTGTTGGGACCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTTGCAAAATGATCATTCAACCTCCCTGCATTGGTaGCTTTGCCTCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: VCGETTSPNPCGLQNDHSTSLHW*LCLLGL
Trigger: CAGCCCCAGGAGGCAAAGTCACCAATGCAGGGAGGT...TGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GAGTCACCACAGCCTGAGACACATAAGGAGAATGCAGTAGTGCCAGCCTGTGGCCCGAGCAGTGTGAGATaGAGCCAAAAGCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESPQPETHKENAVVPACGPSSVR*SQKPPG
Trigger: ACCAGGAGGCTTTTGGCTGCATCTCACACTGCTCGG...GCCACAGGCTGGCACTACTGCATTCTCCTTATGTGTCTCAGGCTGTGGTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATCCCCATCCCCCAAGATaGAGTAAGTCTTGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNPHPPR*SKSCWL
Trigger: GAGCCAACAAGACTTACTGCATCTTGGGGGATGGGG...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTCTTCCAGATGATTGGTaGCCTCAGGTCTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGLPDDW*PQVSMD
Trigger: GTCCATGGAGACCTGAGGCCACCAATCATCTGGAAG...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGAGCGCTTCCAGATGATTaGTGGCCTCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: LRMRWPGLLLEKQGGNSRALPDD*WPQVSM
Trigger: CATGGAGACCTGAGGCCACCAATCATCTGGAAGCGC...TCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTTCCAGGTCCACCTTGTaGACTGCAGGATCAGACTTG +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGSRSTL*TAGSDL
Trigger: CAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGA...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCGGCACGCAGCCATGGTaGTGCAGGCCGATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESGTQPW*CRPMVL
Trigger: CAAGACCATCGGCCTGCACCACCATGGCTGCGTGCC...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGTGTGTGCCATGGCCTaGGGCACGCAGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMVCAMA*GTQPWW
Trigger: CCACCATGGCTGCGTGCCCCAGGCCATGGCACACAC...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTTCAGTGAAGGAGCGCTaGAAGGCCAAGTCTGAGATG +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGSVKER*KAKSEM
Trigger: CATCTCAGACTTGGCCTTCCAGCGCTCCTTCACTGA...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTCCACGCGAGGACGGATaGGCTTTCAGTTCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAPREDG*AFSSGG
Trigger: CCCTCCCGAACTGAAAGCCCATCCGTCCTCGCGTGG...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTTGCAAAATGATCATTCAGTGCTGATGCGGGGATaGGGTACCAGAGAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VCGETTSPNPCGLQNDHSVLMRG*GTREEW
Trigger: CCACTCCTCTCTGGTACCCCATCCCCGCATCAGCAC...TGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTTTGGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGGGCTCGTCAGGGGACAGGCGTTTaGTGGACCAAGTTGCGTGAG +
Preference number: 4 (lower is better)
Translates to: VWVKLVFDLGILLPRGARQGTGV*WTKLRE
Trigger: CTCACGCAACTTGGTCCACCAAACGCCTGTCCCCTG...ACGAGCCCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCTTCTGGTCTGGTAGTTaGTGGGACTTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSALSLEATFWSGS*WDFSSF
Trigger: AAAGGAGGAAAAGTCCCACCAACTACCAGACCAGAA...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCCTCGCTGGAGGCTGTTaGGGCTCCAGCTCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSLAGGC*GSSSLS
Trigger: GCTCAGGGAGCTGGAGCCTCAACAGCCTCCAGCGAG...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTCTGCTGGGGTGAAGTATGGGAGAAAGGGCAGGCCAGTCTGGCCTTCCTCCTCTTTGGACATCTGAGTTaGGACATCCACGCCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LCWGEVWEKGQASLAFLLFGHLS*DIHAVF
Trigger: AAAAACGGCGTGGATGTCTCAACTCAGATGTCCAAA...GAGGAGGAAGGCCAGACTGGCCTGCCCTTTCTCCCATACTTCACCCCAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCCAAAGGGTGTGCGGATaGGGTGCTGGCTCTGGCCGG +
Preference number: 4 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSQRVCG*GAGSGR
Trigger: CCGGCCAGAGCCAGCACCTCATCCGCACACCCTTTG...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCATTGATGAGGAACAGTaGCTCTCGGGCTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSIDEEQ*LSGWCE
Trigger: CTCACACCAGCCCGAGAGTCACTGTTCCTCATCAAT...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TTTGGGGTCCCAACACAGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCAAGGAGACCAGTGTTaGACCACAAAGCGAGTACAG +
Preference number: 4 (lower is better)
Translates to: FGVPTQNRVLTDEVAWSAQGDQC*TTKRVQ
Trigger: CTGTACTCGCTTTGTGGTTCAACACTGGTCTCCTTG...AGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCTGTGTTGGGACCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GGTGAAGGTGGCCAAATTAGCAAAGACGTCTGTGGTGAGACCACCTCTCCCAACTCTTCGATGCCCATGTaGGAGTCACCACAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GEGGQISKDVCGETTSPNSSMPM*ESPQPE
Trigger: CTCAGGCTGTGGTGACTCTCACATGGGCATCGAAGA...GTTGGGAGAGGTGGTCTCACCACAGACGTCTTTGCTAATTTGGCCACCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGACCGGCTCCCTCGGCTaGAGAACTTCTTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMTGSLG*RTSSRR
Trigger: CCTGCGGGAAGAAGTTCTGCAGCCGAGGGAGCCGGT...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp AGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTCAGACGGGTCTGGAGTaGCAGAAGGACATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RTESLRMRWPGLLLEKQGQTGLE*QKDILQ
Trigger: TTGAAGAATGTCCTTCTGGCACTCCAGACCCGTCTG...ACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCAGGCAGGGTCTTGTCTaGTGTCTCCTTCTTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSRQGLV*CLLLGV
Trigger: CACTCCAAGAAGGAGACAGCAGACAAGACCCTGCCT...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTTGGGTCTGGAACAGCTaGTCGTGGCCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAWVWNS*SWPEAW
Trigger: CCATGCTTCCGGCCACGAGCAGCTGTTCCAGACCCA...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCTGGGTCTGGAACAGCTaGTCGTGGCCGGAAGCATGG +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESWVWNS*SWPEAW
Trigger: CCATGCTTCCGGCCACGAGCAGCTGTTCCAGACCCA...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCGGCAATGCAGGTGTATaGCCCTGTGTCTTCATACCG +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSGNAGV*PCVFIP
Trigger: CGGTATGAAGACACAGGGGCATACACCTGCATTGCC...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGTGATCTCCTGCACGTaGAGCCAGGGGCTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAVISCT*SQGLSA
Trigger: AGCTGACAGCCCCTGGCTGCACGTGCAGGAGATCAC...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCCTTGGCCCAGGGCTCTaGTCTGGGCCCTTCATACCT +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESLGPGL*SGPFIP
Trigger: AGGTATGAAGGGCCCAGAGCAGAGCCCTGGGCCAAG...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGAACTGACAGAGGTGTCTaGTTGGAGAGCAGGATCCCT +
Preference number: 4 (lower is better)
Translates to: LRMRWPGLLLEKQGGNSRTDRGV*LESRIP
Trigger: AGGGATCCTGCTCTCCAAGCAGACACCTCTGTCAGT...TCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGACTCCTGGTCGGCCTCTaGTTCCGGGCCACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRLLVGL*FRATPS
Trigger: TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAG...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCCAGCCAAAAGCCTCCTaGTTTCATTTTGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: SPGPTRVLGVSALSLEATQPKAS*FHFDES
Trigger: AGACTCATCAAAATGAAACCAGGAGGCTTTTGGCTG...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTCATCCGGGCCTCTGCTaGTTCCTGGGTCCATCCATC +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAHPGLC*FLGPSI
Trigger: GATGGATGGACCCAGGAACCAGCAGAGGCCCGGATG...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGAGCAGCTCGTTGTGGCTaGAAAGCCCTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LRMRWPGLLLEKQGGNSRAARCG*KALLFL
Trigger: CAAGAAGAGAAGGGCTTTCCAGCCACAACGAGCTGC...TCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAAAAGGGAGAGCTGTTTaGACATCTGAGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGKGRAV*TSELRH
Trigger: ATGTCTCAACTCAGATGTCCAAACAGCTCTCCCTTT...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTCTGTTACATCACCATTaGGGCCAAGCACAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGLLHHH*GQAQSL
Trigger: CAGACTCTGTGCTTGGCCCCAATGGTGATGTAACAG...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGGGGACAGGCGTTTGGTaGACCAAGTTGCGTGAGACA +
Preference number: 4 (lower is better)
Translates to: VRKPSPKCVLSAVLMRGWGTGVW*TKLRET
Trigger: TGTCTCACGCAACTTGGTCCACCAAACGCCTGTCCC...CCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTAGGCTCCGAGCAGTGTaGGATGCAGCCAAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSARLRAV*DAAKSL
Trigger: GAGGCTTTTGGCTGCATCTCACACTGCTCGGAGCCT...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GAGTCACCACAGCCTGAGACACATAAGGAGAATGCAGTAGTGCCAGCCTGTGGCCTGCATCTAAGTCCCTaGACAGAGATTCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: ESPQPETHKENAVVPACGLHLSP*TEIPPG
Trigger: TCCTGGTGGAATCTCTGTTCAGGGACTTAGATGCAG...GCCACAGGCTGGCACTACTGCATTCTCCTTATGTGTCTCAGGCTGTGGTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp ATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGTGACTTTGCCTCCCCAGTTCGGAGCTGCTaGGGTGGCCATTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: IGFPAKRHLPPCIGDFASPVRSC*GGHCHL
Trigger: CAGATGGCAATGGCCACCTCAGCAGCTCCGAACTGG...GGAGGCAAAGTCACCAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCCTGGATAGACACGGATaGCTGGCGGCACATTCACCT +
Preference number: 4 (lower is better)
Translates to: AGVKGAVCVESDTESRVSLDRHG*LAAHSP
Trigger: AGGTGAATGTGCCGCCAGTCATCCGTGTCTATCCAG...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCCTGGCATGCTGTCAGTaGGACCTAAGCCTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESLACCQ*DLSLPS
Trigger: AGACGGCAGGCTTAGGTCTCACTGACAGCATGCCAG...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp ACCCAACCAACTCTATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGACCGGCTCCCTCGGCTaGAGAACTTCTTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TQPTLLVFLPKGIYLPALTGSLG*RTSSRR
Trigger: CCTGCGGGAAGAAGTTCTGCAGCCGAGGGAGCCGGT...CAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGACGCAGGTCAGCACTGTaGTCAGCCCCACGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRRRSAL*SAPRSL
Trigger: CAGTGACCGTGGGGCTGAGCACAGTGCTGACCTGCG...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCCATGGCAGGTGTAATTaGCCATGTGGATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSHGRCN*PCGWWS
Trigger: TGACCACCATCCACATGGGCAATTACACCTGCCATG...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GGTGAAGGTGGCCAAATTAGCAAAGACGTCTGTGGTGAGACCACCTCTCCCAACAAGGACTCTGCTCAGTaGTGGCTGGGCCACATAGAT +
Preference number: 4 (lower is better)
Translates to: GEGGQISKDVCGETTSPNKDSAQ*WLGHID
Trigger: ATCTATGTGGCCCAGCCAGCACTGAGCAGAGTCCTT...GTTGGGAGAGGTGGTCTCACCACAGACGTCTTTGCTAATTTGGCCACCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GTTTGGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGGGCTCGTTGTCCCATGAACCTCTaGTGGGGTGAAGTATGGGAG +
Preference number: 4 (lower is better)
Translates to: VWVKLVFDLGILLPRGARCPMNL*WGEVWE
Trigger: CTCCCATACTTCACCCCAGCAGAGGTTCATGGGACA...ACGAGCCCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp AAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGGGTACCCACCCACTTCATTTTTaGCAATGCAGGTGTATGCCC +
Preference number: 4 (lower is better)
Translates to: KPSPKCVLSAVLMRGWGTHPLHF*QCRCMP
Trigger: GGGCATACACCTGCATTGCCAAAAATGAAGTGGGTG...GGTACCCCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TGCAGTAGTGCCAGCCTGTGGCCTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATACTGCAGATACCCACTaGCAGGGCTGGGTTGCATTT +
Preference number: 4 (lower is better)
Translates to: CSSASLWPSVLGSAVCVYTADTH*QGWVAF
Trigger: AAATGCAACCCAGCCCTGCCAGTGGGTATCTGCAGT...ATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGCTGGCACTACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCAGGACTTTCTGGGCTTaGATGTCGACCACAAGGACT +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSRTFWA*MSTTRT
Trigger: AGTCCTTGTGGTCGACATCCAAGCCCAGAAAGTCCT...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp AGAACCGAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTTGCAGTAAGTCTTGTTaGCTCTCCCTCAGGCTTACA +
Preference number: 4 (lower is better)
Translates to: RTESLRMRWPGLLLEKQGCSKSC*LSLRLT
Trigger: TGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA...ACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GGTGAAGGTGGCCAAATTAGCAAAGACGTCTGTGGTGAGACCACCTCTCCCAACTGCACGTGTCACCTTTaGGGAAACAGTCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GEGGQISKDVCGETTSPNCTCHL*GNSPCC
Trigger: ACAGCAAGGACTGTTTCCTCAAAGGTGACACGTGCA...GTTGGGAGAGGTGGTCTCACCACAGACGTCTTTGCTAATTTGGCCACCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCCCTCTCCAAAGTCATTaGTGTCTTCCAAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSPLQSH*CLPSPG
Trigger: TCCTGGACTTGGAAGACATCAATGACTTTGGAGAGG...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGTGGTGGTCACCTTGGTaGTGTACAGGGAATCATCCT +
Preference number: 4 (lower is better)
Translates to: VRKPSPKCVLSAVLMRGWWWSPW*CTGNHP
Trigger: AGGATGATTCCCTGTACATCACCAAGGTGACCACCA...CCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCAGCTGTTTGGACATCTaGGTTGAGACATCCACGCCG +
Preference number: 4 (lower is better)
Translates to: AGVKGAVCVESDTESRVSSCLDI*VETSTP
Trigger: CGGCGTGGATGTCTCAACTCAGATGTCCAAACAGCT...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCGGTTTGTTGGGGGAATaGAGAAATCATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSGLLGE*RNHPLL
Trigger: CAGGAGTGGATGATTTCTTCATTCCCCCAACAAACC...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGACCGAGTCCTTACGGATaGGGTGGCCTGGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRPSPYG*GGLVCS
Trigger: AGAGCAGACCAGGCCACCTCATCCGTAAGGACTCGG...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp AAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGGGTACCGTGTGGCTTGCAAAATaGTCATTCAAACCAGGACAC +
Preference number: 4 (lower is better)
Translates to: KPSPKCVLSAVLMRGWGTVWLAK*SFKPGH
Trigger: GTGTCCTGGTTTGAATGATCATTTTGCAAGCCACAC...GGTACCCCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GAGTCCTTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATGTGGACCAAGTTGCGTaGGACATACAAGTGATTGAT +
Preference number: 4 (lower is better)
Translates to: ESLRMRWPGLLLEKQGGNVDQVA*DIQVID
Trigger: ATCAATCACTTGTATGTCTCACGCAACTTGGTCCAC...ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAAGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp ACCCAACCAACTCTATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGTAGCTGGGCCTGCATaGCTCCAGGCACTGGCATTC +
Preference number: 4 (lower is better)
Translates to: TQPTLLVFLPKGIYLPALVAGPA*LQALAF
Trigger: GAATGCCAGTGCCTGGAGGCATGCAGGCCCAGCTAC...CAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAGGTGTGCGGATGAGGTaGTGGCTCTGGCCGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGGVRMR*WLWPVL
Trigger: CAGCACCGGCCAGAGCCAGCACCTCATCCGCACACC...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCGGGATGTGTGTGGGGTaGCTGTTACATCACCATTGG +
Preference number: 4 (lower is better)
Translates to: AGVKGAVCVESDTESRVSGMCVG*LLHHHW
Trigger: CCAATGGTGATGTAACAGGCACCCCACACACATCCC...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGAGGCATTTACCTCCCTaGATTGGTGACTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VRKPSPKCVLSAVLMRGWRHLPP*IGDFAS
Trigger: GGAGGCAAAGTCACCAATGCAGGGAGGTAAATGCCT...CCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCGAGGGGAAGACCAGGTaGCCGGACTTGGGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFEGKTR*PDLGGR
Trigger: CCTCCCGCCCAAGTCCGGCCACCTGGTCTTCCCCTC...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTTCGGAGCTGCTGAGGTaGCCATTGCCATCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSASELLR*PLPSAS
Trigger: AGATGCAGATGGCAATGGCCACCTCAGCAGCTCCGA...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCCACCCACTTCATTTTTaGCAATGCAGGTGTATGCCC +
Preference number: 4 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSHPLHF*QCRCMP
Trigger: GGGCATACACCTGCATTGCCAAAAATGAAGTGGGTG...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTTGCAAAATGATCATTCAGCTTCTGTGATCACCTaGAGACTTGGTCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VCGETTSPNPCGLQNDHSASVIT*RLGRDL
Trigger: CAAGTCCCGACCAAGTCTCCAGGTGATCACAGAAGC...TGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTTTGGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGGGCTCGTCTGTTACATCACCATTaGGGCCAAGCACAGAGTCTG +
Preference number: 4 (lower is better)
Translates to: VWVKLVFDLGILLPRGARLLHHH*GQAQSL
Trigger: CAGACTCTGTGCTTGGCCCCAATGGTGATGTAACAG...ACGAGCCCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp ATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAACTCGGTGTGCAGCTTaGCACAGAAATGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: IPWFHDVPRSLGVQLGTETRCAA*HRNDPF
Trigger: AAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGT...TTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCAGTAGTGCCAGCCTGTaGCCTTCTGTTCTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AGVKGAVCVESDTESRVSSSASL*PSVLGS
Trigger: AGAACCCAGAACAGAAGGCCACAGGCTGGCACTACT...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GGTGAAGGTGGCCAAATTAGCAAAGACGTCTGTGGTGAGACCACCTCTCCCAACCTCCAGAGGGCTATGTaGGTTGTACTTCTTCGATGC +
Preference number: 4 (lower is better)
Translates to: GEGGQISKDVCGETTSPNLQRAM*VVLLRC
Trigger: GCATCGAAGAAGTACAACCCACATAGCCCTCTGGAG...GTTGGGAGAGGTGGTCTCACCACAGACGTCTTTGCTAATTTGGCCACCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGAACCGGTTCCGGACATTaGCTGCAGATACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRTGSGH*LQIPTG
Trigger: GCCAGTGGGTATCTGCAGTCAATGTCCGGAACCGGT...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCGGGACAATGACTATGTaGAGGCAACTGACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AGVKGAVCVESDTESRVSGTMTM*RQLTEV
Trigger: CACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCC...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTTGCAAAATGATCATTCATTTTTGCTGAGTCTCTaGTCTAGGCGGTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VCGETTSPNPCGLQNDHSFLLSL*SRRSPE
Trigger: CTCTGGAGACCGCCTAGATCAGAGACTCAGCAAAAA...TGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTCGAGCCTGTTTTTGCTaGGTCTCTGATCTAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSARACFC*VSDLGG
Trigger: ACCGCCTAGATCAGAGACTCAGCAAAAACAGGCTCG...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGACAAAGACGTCTGTGGTaGGACCACCTCTCCCAACCC +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERQRRLW*DHLSQP
Trigger: GGGTTGGGAGAGGTGGTCTCACCACAGACGTCTTTG...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCACCTTCTTGGAGTGGCTaGAGACGGGTCTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKAPSWSG*RRVWSA
Trigger: GGCACTCCAGACCCGTCTGCAGCCACTCCAAGAAGG...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGACGCACTGTGATCTCCTaGACGTGCAGCCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGRTVIS*TCSQGL
Trigger: CAGCCCCTGGCTGCACGTGCAGGAGATCACAGTGCG...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCCTCCTGGTCGGCCTCTaGTTCCGGGCCACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFLLVGL*FRATPS
Trigger: TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAG...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTTGCAAAATGATCATTCAAGGCAAGCAGCACGGTaGAGCTTACAGTGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VCGETTSPNPCGLQNDHSRQAAR*SLQWFS
Trigger: TGAAAACCACTGTAAGCTCCACCGTGCTGCTTGCCT...TGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCCATGGCATCTTAGGCTaGCTGCCACTCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSHGILG*LPLQAP
Trigger: AGGAGCCTGGAGTGGCAGCCAGCCTAAGATGCCATG...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCGCTTCTGTGATCACCTaGAGACTTGGTCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESASVIT*RLGRDL
Trigger: CAAGTCCCGACCAAGTCTCCAGGTGATCACAGAAGC...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAGAGCAGGATCCCTTaGTTCCATGATGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMESRIP*FHDVPR
Trigger: CCTGGGGACATCATGGAACCAAGGGATCCTGCTCTC...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGACGGATGAGGTGGCCTaGTCTGCTCTTGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMTDEVA*SALGEA
Trigger: TGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGT...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGCATACCGAACACTGCTaGTGTGGAGTTCGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMHTEHC*CGVRSH
Trigger: ATGGGAGCGAACTCCACATCAGCAGTGTTCGGTATG...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp ATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGTGACTTTGCCTCCCAAGCACAGAGTCTGTaGCACTGTCAACGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IGFPAKRHLPPCIGDFASQAQSL*HCQRAA
Trigger: AGCTGCTCGTTGACAGTGTCACAGACTCTGTGCTTG...GGAGGCAAAGTCACCAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTATTGATTGCTTTCAGTaGAGGAGCGCTGGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSAIDCFQ*RSAGRP
Trigger: TGGCCTTCCAGCGCTCCTTCACTGAAAGCAATCAAT...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGAACTCTCGGGCTGGTGTaGGGAGGTACTGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRTLGLV*GGTVQT
Trigger: TGTTTGGACAGTACCTCCTCACACCAGCCCGAGAGT...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCCTATGTGAAGGCAACTaGCAGAGGTGTCTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESLCEGN*QRCLLG
Trigger: TCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAG...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp TGCAGTAGTGCCAGCCTGTGGCCTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATGCCAGTATTCTCAGATaGCCATTGTTCTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CSSASLWPSVLGSAVCVYASILR*PLFFLA
Trigger: AGCCAGAAAGAACAATGGTCATCTGAGAATACTGGC...ATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGCTGGCACTACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp CTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGACAGGGCCAGTATTCTCTCTAGGCTTTTGAGGTaGGCTTCCTCAACTTATATC +
Preference number: 4 (lower is better)
Translates to: LVCSWRSRVAIVDRASILSRLLR*ASSTYI
Trigger: GATATAAGTTGAGGAAGCTCACCTCAAAAGCCTAGA...GAGAATACTGGCCCTGTCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTCTAAGATATCAGTTGTaGATTGACCTTGTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGLRYQL*IDLVGS
Trigger: TGAACCCACAAGGTCAATTCACAACTGATATCTTAG...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCGTCCACCTTGTGGACTaGAGGATCAGACTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: AGVKGAVCVESDTESRVSVHLVD*RIRLVE
Trigger: TTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGAC...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAACGCAGCCATGGTGGTaGAGGCCGATGGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGTQPWW*RPMVLR
Trigger: CCTCAAGACCATCGGCCTGCACCACCATGGCTGCGT...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp AAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGGGTACCCGGAGAGCATCTTTCTaGTTACTAGCATTTGAGATT +
Preference number: 4 (lower is better)
Translates to: KPSPKCVLSAVLMRGWGTRRASF*LLAFEI
Trigger: AATCTCAAATGCTAGTAAGCAGAAAGATGCTCTCCG...GGTACCCCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAAGGCCACCCATACCTTaGCAGGCAAGCCCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGRPPIP*QASPVC
Trigger: GCAGACTGGGCTTGCCTGGCAAGGTATGGGTGGCCT...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCACTGCTGTCTCCTTCTTaGAGTGGCTGCAGACGGGTC +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKALLSPS*SGCRRV
Trigger: GACCCGTCTGCAGCCACTCCAAGAAGGAGACAGCAG...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCGGAGTTCGCTCCCATTaGCTAAAAGGGAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESGVRSH*LKGRAV
Trigger: AACAGCTCTCCCTTTTAGCCAATGGGAGCGAACTCC...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCGACTGTAGGACTTTCTaGGCTTGGATGTCGACCACA +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESDCRTF*AWMSTT
Trigger: TGTGGTCGACATCCAAGCCCAGAAAGTCCTACAGTC...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
3UTR CAA 72 bp GTCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTaGCAAAATGATCATTCAAACCAGGACACATGTAAG +
Preference number: 4 (lower is better)
Translates to: VCGETTSPNPCG*QNDHSNQDTCK
Trigger: CTTACATGTGTCCTGGTTTGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGACGTTGCGCTTCCAGATaGTTGGTGGCCTCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGRCASR*LVASGL
Trigger: GAGACCTGAGGCCACCAATCATCTGGAAGCGCAACG...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAACATGTTTCCCACGCTaGGGCCTTCCTCTCGCCACA +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGTCFPR*GLPLAT
Trigger: TGTGGCGAGAGGAAGGCCTCAGCGTGGGAAACATGT...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCCCACACTTGGTCATGTaGCTTGTCATAGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESPHLVM*LVIGQL
Trigger: AAGCTGTCCTATGACAAGTCACATGACCAAGTGTGG...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCAACTCTCGGGCTGGTGTaGGGAGGTACTGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKATLGLV*GGTVQT
Trigger: TGTTTGGACAGTACCTCCTCACACCAGCCCGAGAGT...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGGGACAATGACTATGTaGAGGCAACTGACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMGTMTM*RQLTEV
Trigger: CACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCC...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp ATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATATCAGTTGTGAATTaGCCTTGTGGGTTCATTAGG +
Preference number: 4 (lower is better)
Translates to: IPWFHDVPRSLGVQLGTEISVVN*PCGFIR
Trigger: CCTAATGAACCCACAAGGTCAATTCACAACTGATAT...TTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCACCGAGCAGTGTGAGATaGAGCCAAAAGCCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKAPSSVR*SQKPPG
Trigger: ACCAGGAGGCTTTTGGCTGCATCTCACACTGCTCGG...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAGGGATGTGTGTGGGGTaGCTGTTACATCACCATTGG +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERGMCVG*LLHHHW
Trigger: CCAATGGTGATGTAACAGGCACCCCACACACATCCC...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGACAGGGCCAGTATTCTCTTCTGTTCTGGGTTCTaGAGTGTGTGTGTATTGATT +
Preference number: 4 (lower is better)
Translates to: LVCSWRSRVAIVDRASILFCSGF*SVCVLI
Trigger: AATCAATACACACACACTGCAGAACCCAGAACAGAA...GAGAATACTGGCCCTGTCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCAGCGCTTCCAGATGATTaGTGGCCTCAGGTCTCCATG +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKAALPDD*WPQVSM
Trigger: CATGGAGACCTGAGGCCACCAATCATCTGGAAGCGC...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAGGTTTGAGGTGCCTCTaGATCTCACAGTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERGLRCL*ISQSTG
Trigger: TCCTGTGGACTGTGAGATCCAGAGGCACCTCAAACC...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCAGATCACCTGGAGACTTaGTCGGGACTTGTGCACGTC +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKADHLET*SGLVHV
Trigger: GACGTGCACAAGTCCCGACCAAGTCTCCAGGTGATC...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCTGCAGTAAGTCTTGTTaGCTCTCCCTCAGGCTTACA +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESCSKSC*LSLRLT
Trigger: TGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCATTGATTGGGGAATGTaGGTAAGAAAACCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESIDWGM*VRKPSP
Trigger: CGGCGAGGGTTTTCTTACCCACATTCCCCAATCAAT...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCTGGTCTGGTAGTTGGTaGGACTTTTCCTCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESWSGSW*DFSSFR
Trigger: CCTAAAGGAGGAAAAGTCCCACCAACTACCAGACCA...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGACGTTTTTCAGCCAAGTaGTTCTGGGCATGGGAATGC +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERRFSAK*FWAWEC
Trigger: GCATTCCCATGCCCAGAATCACTTGGCTGAAAAACG...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCTTTGGACATCTGAGTTaGGACATCCACGCCGTTTTT +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESFGHLS*DIHAVF
Trigger: AAAAACGGCGTGGATGTCTCAACTCAGATGTCCAAA...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCAAGGGTCTTTCTAGCTaGGTCTTCAATGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESKGLSS*VFNEER
Trigger: TCGCTCTTCATTGAAGACTCAGCTAGAAAGACCCTT...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCACCGGTTCCGGACATTaGCTGCAGATACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFTGSGH*LQIPTG
Trigger: GCCAGTGGGTATCTGCAGTCAATGTCCGGAACCGGT...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAGCAGGCCGATGGTCTTaGGGGGCATCATTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGAGRWS*GASLFP
Trigger: TGGAAACAATGATGCCCCTCAAGACCATCGGCCTGC...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp ACCCAACCAACTCTATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGCTGGAAGGCCAAGTCTaGGATGCCCGAGTTTATTTG +
Preference number: 4 (lower is better)
Translates to: TQPTLLVFLPKGIYLPALLEGQV*DARVYL
Trigger: CAAATAAACTCGGGCATCTCAGACTTGGCCTTCCAG...CAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGACATGGCAGGTGTAATTaGCCATGTGGATGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERHGRCN*PCGWWS
Trigger: TGACCACCATCCACATGGGCAATTACACCTGCCATG...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGATTCTGGGCATGGGAATaGCCTCAGCATGGCATCTTA +
Preference number: 4 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRFWAWE*PQHGIL
Trigger: TAAGATGCCATGCTGAGGGCATTCCCATGCCCAGAA...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGATCCGTGGGTTTGAGGTaGCTCTGGATCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGSVGLR*LWISQS
Trigger: GGACTGTGAGATCCAGAGGCACCTCAAACCCACGGA...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp ATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGTGACTTTGCCTCCATGCCCGAGTTTATTTaGAGGTCATACAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IGFPAKRHLPPCIGDFASMPEFI*RSYRVW
Trigger: CCAGACCCTGTATGACCTGCAAATAAACTCGGGCAT...GGAGGCAAAGTCACCAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGATGCCCGAGTTTATTTaGAGGTCATACAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMMPEFI*RSYRVW
Trigger: CCAGACCCTGTATGACCTGCAAATAAACTCGGGCAT...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCCAGGCAAGCCCAGTCTaGCCTGAATCTGGGGTACCA +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFQASPV*PESGVP
Trigger: TGGTACCCCAGATTCAGGGCAGACTGGGCTTGCCTG...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTTTGGTGGACCAAGTTaGGTGAGACATACAAGTGAT +
Preference number: 4 (lower is better)
Translates to: AGVKGAVCVESDTESRVSFGGPS*VRHTSD
Trigger: ATCACTTGTATGTCTCACGCAACTTGGTCCACCAAA...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp ATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGTGACTTTGCCTCCGAGATGGGTCATCCATaGATCCCAGCTACTGTGAAA +
Preference number: 4 (lower is better)
Translates to: IGFPAKRHLPPCIGDFASEMGHP*IPATVK
Trigger: TTTCACAGTAGCTGGGATGCATGGATGACCCATCTC...GGAGGCAAAGTCACCAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCAGCAGCTCGTTGTGGCTaGAAAGCCCTTCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKAAARCG*KALLFL
Trigger: CAAGAAGAGAAGGGCTTTCCAGCCACAACGAGCTGC...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCTTCACCTGCAGGACGTaGGTCTGGAACAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFFTCRT*VWNSCS
Trigger: CGAGCAGCTGTTCCAGACCCACGTCCTGCAGGTGAA...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCCATGGCATCTTAGGCTaGCTGCCACTCCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFHGILG*LPLQAP
Trigger: AGGAGCCTGGAGTGGCAGCCAGCCTAAGATGCCATG...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCTCACAGTCCACAGGATaGATGACGATGATACCGTCG +
Preference number: 4 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSSQSTG*MTMIPS
Trigger: CGACGGTATCATCGTCATCCATCCTGTGGACTGTGA...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCCTTCAGGAACTCACCTaGCCCCACTCGTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFLQELT*PHSCPW
Trigger: CCAAGGACACGAGTGGGGCCAGGTGAGTTCCTGAAG...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp GTTTGGGTCAAACTGGTCTTTGACTTAGGAATCCTGCTGCCCAGAGGGGCTCGTTTTAAAAGGCCAGTTTaGGTCAAACTGGTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: VWVKLVFDLGILLPRGARFKRPV*VKLVFD
Trigger: GTCAAAGACCAGTTTGACCCAAACTGGCCTTTTAAA...ACGAGCCCCTCTGGGCAGCAGGATTCCTAAGTCAAAGACCAGTTTGACCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGACCCATGAACCTCTGCTaGGGTGAAGTATGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERPMNLC*GEVWEK
Trigger: TTTCTCCCATACTTCACCCCAGCAGAGGTTCATGGG...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCGGTTTGTTGGGGGAATaGAGAAATCATCCACTCCTG +
Preference number: 4 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSGLLGE*RNHPLL
Trigger: CAGGAGTGGATGATTTCTTCATTCCCCCAACAAACC...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR TCA 90 bp ATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGGTGACTTTGCCTCCAGACATACAAGTGATTaGTCTCATGAGATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IGFPAKRHLPPCIGDFASRHTSD*SHEIWG
Trigger: GCCCCAGATCTCATGAGATCAATCACTTGTATGTCT...GGAGGCAAAGTCACCAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAGGCAATGCAGGTGTATaGCCCTGTGTCTTCATACCG +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGGNAGV*PCVFIP
Trigger: CGGTATGAAGACACAGGGGCATACACCTGCATTGCC...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR GCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAGGCCAAGTCTGAGATaGCCGAGTTTATTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERRPSLR*PSLFAG
Trigger: ACCTGCAAATAAACTCGGGCATCTCAGACTTGGCCT...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCGATCACCTGGAGACTTaGTCGGGACTTGTGCACGTC +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFDHLET*SGLVHV
Trigger: GACGTGCACAAGTCCCGACCAAGTCTCCAGGTGATC...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAGCCCTTCTCTTCTTGTaGCTTCAAAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGALLFL*LQSFWA
Trigger: AGCCCAGAAGCTTTGAAGTCACAAGAAGAGAAGGGC...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGACAAGGAGACCAGTGTTaGACCACAAAGCGAGTACAG +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGQGDQC*TTKRVQ
Trigger: CTGTACTCGCTTTGTGGTTCAACACTGGTCTCCTTG...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCAGGGTTTCCTCTCCTTaGAAGAGTTCATTCCTTAAT +
Preference number: 4 (lower is better)
Translates to: VRDNDYVKATDRGVCLESRVSSP*KSSFLN
Trigger: ATTAAGGAATGAACTCTTTCAAGGAGAGGAAACCCT...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAAATGTACAGCGTACCTaGTTGAGGCTGCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGNVQRT*LRLQCQ
Trigger: CTGACACTGCAGCCTCAAGCAGGTACGCTGTACATT...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAGGGAAGGATATAGTTaGACCTCGGAGAGCATCTTT +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERREGYS*TSESIF
Trigger: AAAGATGCTCTCCGAGGTCCAACTATATCCTTCCCT...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR GCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCGAAATCATCCACTCCTaGAAAGGGTGTGCGGATGAG +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFEIIHS*KGCADE
Trigger: CTCATCCGCACACCCTTTGCAGGAGTGGATGATTTC...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CCA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCAAAGGGAGAGCTGTTTaGACATCTGAGTTGAGACAT +
Preference number: 4 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSKGRAV*TSELRH
Trigger: ATGTCTCAACTCAGATGTCCAAACAGCTCTCCCTTT...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCTGTGGCCTTCTGTTCTaGGTTCTGCAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFCGLLF*VLQCVC
Trigger: ACACACACACTGCAGAACCCAGAACAGAAGGCCACA...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CCA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAGCCAAACCTGATGTaGTTGATGATGAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CSKSCWLSLRLTASQMERKPNLM*LMMRFV
Trigger: AACAAACCTCATCATCAACCACATCAGGTTTGGCTT...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCAAGGGTCTTTCTAGCTaGGTCTTCAATGAAGAGCGA +
Preference number: 4 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFKGLSS*VFNEER
Trigger: TCGCTCTTCATTGAAGACTCAGCTAGAAAGACCCTT...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR TCA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCATTTCTTCATAGCTCATaGAAATCTTTTCCGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KSCWLSLRLTASQMERKAFLHSS*KSFPWV
Trigger: AACCCACGGAAAAGATTTTCATGAGCTATGAAGAAA...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTACCAGGTGGCCGGACTaGGGCGGGAGGGAGGGAGCA +
Preference number: 5 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSTRWPD*GGREGA
Trigger: TGCTCCCTCCCTCCCGCCCAAGTCCGGCCACCTGGT...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTACTAGGGGGTGTTCCTaGGCCCAGGGCTCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: VREGGPCSWSASASGPLRTRGCS*AQGSAL
Trigger: CAGAGCAGAGCCCTGGGCCAAGGAACACCCCCTAGT...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS TCA 90 bp GCAGCTGTCGGGCAGCAGAGGCGGGGCTGTCCTGTCGGCACTGGATaGAGAAGTAGCCGCCCAGGTGGGTGTGTGCCATGGCCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: AAVGQQRRGCPVGTG*RSSRPGGCVPWPGA
Trigger: TGCCCCAGGCCATGGCACACACCCACCTGGGCGGCTACTTCTTCATCCAGTGCCGACAGGACAGCCCCGCCTCTGCTGCCCGACAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 90 bp TGCATGCCTCCAGGCACTGGCATTCGGGCTCCCCTGTCTTCCTGCTaGGCACGCACCGGCTCCCTCGGCTGCAGAACTTCTTCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: CMPPGTGIRAPLSSC*ARTGSLGCRTSSRR
Trigger: CCTGCGGGAAGAAGTTCTGCAGCCGAGGGAGCCGGTGCGTGCTCAGCAGGAAGACAGGGGAGCCCGAATGCCAGTGCCTGGAGGCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000510685.1
CDS CCA 90 bp CCGCCCAGGTGGGTGTGTGCCATGGCCTGGGGCACGCAGCCATGGTaGTGCAGGCCGATGGTCTTGAGGGGCATCATTGTTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PPRWVCAMAWGTQPW*CRPMVLRGIIVSRS
Trigger: GGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCTGCACCACCATGGCTGCGTGCCCCAGGCCATGGCACACACCCACCTGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCTTCAGGGTGAGCCCGTaGCGCTTCCAGATGATTGGT +
Preference number: 5 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSFRVSP*RFQMIG
Trigger: ACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAA...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGTGGAGTTCGCTCCCATaGGCTAAAAGGGAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRWSSLP*AKRESC
Trigger: ACAGCTCTCCCTTTTAGCCAATGGGAGCGAACTCCA...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp GTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTTGCAGGCCGATGGTCTaGAGGGGCATCATTGTTTCC +
Preference number: 5 (lower is better)
Translates to: VREGGPCSWSASASGPLRCRPMV*RGIIVS
Trigger: GGAAACAATGATGCCCCTCAAGACCATCGGCCTGCA...ACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS GCA 90 bp CCCAGGTGGGTGTGTGCCATGGCCTGGGGCACGCAGCCATGGTGGTaGAGGCCGATGGTCTTGAGGGGCATCATTGTTTCCAGGTCCACC +
Preference number: 5 (lower is better)
Translates to: PRWVCAMAWGTQPWW*RPMVLRGIIVSRST
Trigger: GGTGGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCTGCACCACCATGGCTGCGTGCCCCAGGCCATGGCACACACCCACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp GAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTACCGGTTCCGGACATaGACTGCAGATACCCACTGG +
Preference number: 5 (lower is better)
Translates to: EAPAPGRPLLPGHSVRAKYRFRT*TADTHW
Trigger: CCAGTGGGTATCTGCAGTCAATGTCCGGAACCGGTA...CTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp GGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGCAGGTGCTGCAGAAGTaGACTCTGTCACTCCTGATT +
Preference number: 5 (lower is better)
Translates to: GREAPAPGRPLLPGHSVRQVLQK*TLSLLI
Trigger: AATCAGGAGTGACAGAGTCAACTTCTGCAGCACCTG...CCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS GCA 90 bp AAACCTCCCATCAGAGCCGCACACAGGCACGTAGCTGGGCCTGCATaGCTCCAGGCACTGGCATTCGGGCTCCCCTGTCTTCCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: KPPIRAAHRHVAGPA*LQALAFGLPCLPAE
Trigger: CTCAGCAGGAAGACAGGGGAGCCCGAATGCCAGTGCCTGGAGGCATGCAGGCCCAGCTACGTGCCTGTGTGCGGCTCTGATGGGAGGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000510685.1
CDS-3UTR CAA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGCAAGGAGACCAGTGTaGAACCACAAAGCGAGTACA +
Preference number: 5 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSARRPV*NHKAST
Trigger: TGTACTCGCTTTGTGGTTCAACACTGGTCTCCTTGC...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS GCA 90 bp CATAAAACCTCCCATCAGAGCCGCACACAGGCACGTAGCTGGGCCTaGATGCCTCCAGGCACTGGCATTCGGGCTCCCCTGTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: HKTSHQSRTQARSWA*MPPGTGIRAPLSSC
Trigger: GCAGGAAGACAGGGGAGCCCGAATGCCAGTGCCTGGAGGCATGCAGGCCCAGCTACGTGCCTGTGTGCGGCTCTGATGGGAGGTTTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000510685.1
CDS GCA 90 bp TCATACAGGGTCTGGATCTCGCCCCGCACTGTGATCTCCTGCACGTaGAGCCAGGGGCTGTCAGCTGCAGCACTGACTATGAAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: SYRVWISPRTVISCT*SQGLSAAALTMKRP
Trigger: CGGGCGCTTCATAGTCAGTGCTGCAGCTGACAGCCCCTGGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGATCCAGACCCTGTATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCACACCCACTTCATTTTaGGCAATGCAGGTGTATGCC +
Preference number: 5 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSTPTSF*AMQVYA
Trigger: GGCATACACCTGCATTGCCAAAAATGAAGTGGGTGT...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp CAGTTCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGCAGGATCAGACTTGTaGAAGATGAAGCCAAACCTG +
Preference number: 5 (lower is better)
Translates to: QFGREAPAPGRPLLPGHSAGSDL*KMKPNL
Trigger: CAGGTTTGGCTTCATCTTCAACAAGTCTGATCCTGC...GGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCCTGTTACATCACCATaGGGGCCAAGCACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSPVTSP*GPSTES
Trigger: AGACTCTGTGCTTGGCCCCAATGGTGATGTAACAGG...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS TCA 90 bp CCATGGCCTGGGGCACGCAGCCATGGTGGTGCAGGCCGATGGTCTTaGGGGGCATCATTGTTTCCAGGTCCACCTTGTGGACTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: PWPGARSHGGAGRWS*GASLFPGPPCGLQD
Trigger: ATCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCTGCACCACCATGGCTGCGTGCCCCAGGCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 90 bp ATGCCCTCCAAGCAGTCGGCCCCTGGGCAGGGTCACACGCAGCATTaGACACACAAGAAACCGGCCACGTGGATGCATCTGGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: MPSKQSAPGQGHTQH*THKKPATWMHLVQA
Trigger: TGCCTGCACCAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAATGCTGCGTGTGACCCTGCCCAGGGGCCGACTGCTTGGAGGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CCA 90 bp GTCCAGGAAGTTCAGGGTGAGCCCGTTGCGCTTCCAGATGATTGGTaGCCTCAGGTCTCCATGGACGGCGCAGGTCAGCACTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VQEVQGEPVALPDDW*PQVSMDGAGQHCAQ
Trigger: CTGAGCACAGTGCTGACCTGCGCCGTCCATGGAGACCTGAGGCCACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAACTTCCTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000621681.4
CDS-3UTR CAA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTTGGAGTTCGCTCCCATaGGCTAAAAGGGAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAWSSLP*AKRESC
Trigger: ACAGCTCTCCCTTTTAGCCAATGGGAGCGAACTCCA...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp TCGGGAGGGAGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGTGTTTTGTCTCCCATaGATGAGGAACAGTGACTCT +
Preference number: 5 (lower is better)
Translates to: SGGRPLLLVGLCFRATPSVFCLP*MRNSDS
Trigger: AGAGTCACTGTTCCTCATCAATGGGAGACAAAACAC...TGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCTCCCTCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS GCA 90 bp ACAGAGATTCCACCAGGAGGCGCTTCTGGGAGGCAGGGTCTTGTCTaGTGTCTCCTTCTTGGAGTGGCTGCAGACGGGTCTGGAGTGCCA +
Preference number: 5 (lower is better)
Translates to: TEIPPGGASGRQGLV*CLLLGVAADGSGVP
Trigger: TGGCACTCCAGACCCGTCTGCAGCCACTCCAAGAAGGAGACAGCAGACAAGACCCTGCCTCCCAGAAGCGCCTCCTGGTGGAATCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000514998.1
CDS GCA 90 bp TGCAGGTCATACAGGGTCTGGATCTCGCCCCGCACTGTGATCTCCTaGACGTGCAGCCAGGGGCTGTCAGCTGCAGCACTGACTATGAAG +
Preference number: 5 (lower is better)
Translates to: CRSYRVWISPRTVIS*TCSQGLSAAALTMK
Trigger: CTTCATAGTCAGTGCTGCAGCTGACAGCCCCTGGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGATCCAGACCCTGTATGACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 90 bp CAAGTCCAGGAAGTTCAGGGTGAGCCCGTTGCGCTTCCAGATGATTaGTGGCCTCAGGTCTCCATGGACGGCGCAGGTCAGCACTGTGCT +
Preference number: 5 (lower is better)
Translates to: QVQEVQGEPVALPDD*WPQVSMDGAGQHCA
Trigger: AGCACAGTGCTGACCTGCGCCGTCCATGGAGACCTGAGGCCACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAACTTCCTGGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000621681.4
CDS-3UTR CAA 90 bp CTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTTGGATGGTGGTCACCTaGGTGATGTACAGGGAATCA +
Preference number: 5 (lower is better)
Translates to: LLLVGLCFRATPSGQSLAWMVVT*VMYRES
Trigger: TGATTCCCTGTACATCACCAAGGTGACCACCATCCA...AGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS GCA 90 bp TTCTGGGAGGCAGGGTCTTGTCTGCTGTCTCCTTCTTGGAGTGGCTaGAGACGGGTCTGGAGTGCCAGAAGGACATTCTTCAAGCGGGCG +
Preference number: 5 (lower is better)
Translates to: FWEAGSCLLSPSWSG*RRVWSARRTFFKRA
Trigger: CGCCCGCTTGAAGAATGTCCTTCTGGCACTCCAGACCCGTCTGCAGCCACTCCAAGAAGGAGACAGCAGACAAGACCCTGCCTCCCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000514998.1
CDS CCA 90 bp CCGGCCATGGTGCACGTGTCACCTTTGAGGAAACAGTCCTTGCTGTaGATGACGGTGATCCTCTTTCCCAGGAGGCAAGCAGCACGGTGG +
Preference number: 5 (lower is better)
Translates to: PAMVHVSPLRKQSLL*MTVILFPRRQAARW
Trigger: CCACCGTGCTGCTTGCCTCCTGGGAAAGAGGATCACCGTCATCCACAGCAAGGACTGTTTCCTCAAAGGTGACACGTGCACCATGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000510685.1
CDS CCA 90 bp GTCAGCTGCAGCACTGACTATGAAGCGCCCGTCGGGGGATGTGTGTaGGGTGCCTGTTACATCACCATTGGGGCCAAGCACAGAGTCTGT +
Preference number: 5 (lower is better)
Translates to: VSCSTDYEAPVGGCV*GACYITIGAKHRVC
Trigger: ACAGACTCTGTGCTTGGCCCCAATGGTGATGTAACAGGCACCCCACACACATCCCCCGACGGGCGCTTCATAGTCAGTGCTGCAGCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 90 bp GCCAAGTCTGAGATGCCCGAGTTTATTTGCAGGTCATACAGGGTCTaGATCTCGCCCCGCACTGTGATCTCCTGCACGTGCAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: AKSEMPEFICRSYRV*ISPRTVISCTCSQG
Trigger: CCCCTGGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGATCCAGACCCTGTATGACCTGCAAATAAACTCGGGCATCTCAGACTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTGCAGGATCAGACTTGTaGAAGATGAAGCCAAACCTG +
Preference number: 5 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSAGSDL*KMKPNL
Trigger: CAGGTTTGGCTTCATCTTCAACAAGTCTGATCCTGC...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp ATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAACTAGGGGGTGTTCCTaGGCCCAGGGCTCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: IPWFHDVPRSLGVQLGTETRGCS*AQGSAL
Trigger: CAGAGCAGAGCCCTGGGCCAAGGAACACCCCCTAGT...TTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp CTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCTGGCTGGGTCTACTGCAGGATCAGACTaGTTGAAGATGAAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: LVGLCFRATPSGQSLAGSTAGSD*LKMKPN
Trigger: GTTTGGCTTCATCTTCAACAAGTCTGATCCTGCAGT...AGACCCAGCCAGACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp AGGCCCCTGCTCCTGGTCGGCCTCTGCTTCCGGGCCACTCCGTCAGGGCAAAGTCGCGTAGATGTTGTATaGATTGCTTTCAGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: RPLLLVGLCFRATPSGQSRVDVV*IAFSEG
Trigger: TCCTTCACTGAAAGCAATCAATACAACATCTACGCG...ACTTTGCCCTGACGGAGTGGCCCGGAAGCAGAGGCCGACCAGGAGCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp TGCGAGGGAGAAGATGCGGTCCCACGCGAGGACGGATGGGCTTTCAGTTCGGGAGCAAGGAGACCAGTGTaGAACCACAAAGCGAGTACA +
Preference number: 5 (lower is better)
Translates to: CEGEDAVPREDGWAFSSGARRPV*NHKAST
Trigger: TGTACTCGCTTTGTGGTTCAACACTGGTCTCCTTGC...TCCCGAACTGAAAGCCCATCCGTCCTCGCGTGGGACCGCATCTTCTCCCTCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp TCACCTGGCCCCACTCGTGTCCTTGGGGTTTCTGCATTGAGCCTGGAGGCCACCAGAGGGCTATGTGGGTaGTACTTCTTCGATGCCCAT +
Preference number: 5 (lower is better)
Translates to: SPGPTRVLGVSALSLEATRGLCG*YFFDAH
Trigger: ATGGGCATCGAAGAAGTACAACCCACATAGCCCTCT...GGTGGCCTCCAGGCTCAATGCAGAAACCCCAAGGACACGAGTGGGGCCAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS GCA 90 bp GTGAAGGAGCGCTGGAAGGCCAAGTCTGAGATGCCCGAGTTTATTTaGAGGTCATACAGGGTCTGGATCTCGCCCCGCACTGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: VKERWKAKSEMPEFI*RSYRVWISPRTVIS
Trigger: GGAGATCACAGTGCGGGGCGAGATCCAGACCCTGTATGACCTGCAAATAAACTCGGGCATCTCAGACTTGGCCTTCCAGCGCTCCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp GTCTGCTTGGAGAGCAGGATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTTTCCAGGTCCACCTaGTGGACTGCAGGATCAGAC +
Preference number: 5 (lower is better)
Translates to: VCLESRIPWFHDVPRSLGVSRST*WTAGSD
Trigger: GTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAAC...ACCGAGTGACCTGGGGACATCATGGAACCAAGGGATCCTGCTCTCCAAGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS GCA 90 bp AGGGTCACACGCAGCATTGAACACACAAGAAACCGGCCACGTGGATaGATCTGGTGCAGGCACGAGATGCAATTCCTTCCTCTCGCCACA +
Preference number: 5 (lower is better)
Translates to: RVTRSIEHTRNRPRG*IWCRHEMQFLPLAT
Trigger: TGTGGCGAGAGGAAGGAATTGCATCTCGTGCCTGCACCAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAATGCTGCGTGTGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CCA 90 bp GACTTTCTGGGCTTGGATGTCGACCACAAGGACTCTGCTCAGTGCTaGCTGGGCCACATAGATGTACCGGTTCCGGACATTGACTGCAGA +
Preference number: 5 (lower is better)
Translates to: DFLGLDVDHKDSAQC*LGHIDVPVPDIDCR
Trigger: TCTGCAGTCAATGTCCGGAACCGGTACATCTATGTGGCCCAGCCAGCACTGAGCAGAGTCCTTGTGGTCGACATCCAAGCCCAGAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp GGTGAAGGTGGCCAAATTAGCAAAGACGTCTGTGGTGAGACCACCTCTCCCAACTCTGCTGTCTCCTTCTaGGAGTGGCTGCAGACGGGT +
Preference number: 5 (lower is better)
Translates to: GEGGQISKDVCGETTSPNSAVSF*EWLQTG
Trigger: ACCCGTCTGCAGCCACTCCAAGAAGGAGACAGCAGA...GTTGGGAGAGGTGGTCTCACCACAGACGTCTTTGCTAATTTGGCCACCTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp CTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGACAGGGCCAGTATTCTCCTGCTGAGGTGGCCATaGCCATCTGCATCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: LVCSWRSRVAIVDRASILLLRWP*PSASKS
Trigger: GGACTTAGATGCAGATGGCAATGGCCACCTCAGCAG...GAGAATACTGGCCCTGTCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCTGCAGGCCGATGGTCTaGAGGGGCATCATTGTTTCC +
Preference number: 5 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSCRPMV*RGIIVS
Trigger: GGAAACAATGATGCCCCTCAAGACCATCGGCCTGCA...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS CCA 90 bp ACACGCAGCATTGAACACACAAGAAACCGGCCACGTGGATGCATCTaGTGCAGGCACGAGATGCAATTCCTTCCTCTCGCCACAGGATGT +
Preference number: 5 (lower is better)
Translates to: TRSIEHTRNRPRGCI*CRHEMQFLPLATGC
Trigger: ACATCCTGTGGCGAGAGGAAGGAATTGCATCTCGTGCCTGCACCAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAATGCTGCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS-3UTR CAA 90 bp CCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATGATCCCTTTACACAGCAGCCCTCCTGGTTTCATTTaGATGAGTCTGAGACGGCCG +
Preference number: 5 (lower is better)
Translates to: PRSLGVQLGTEMIPLHSSPPGFI*MSLRRP
Trigger: CGGCCGTCTCAGACTCATCAAAATGAAACCAGGAGG...GCTGCTGTGTAAAGGGATCATTTCTGTGCCAAGCTGCACACCGAGTGACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp GTCTGTGGTGAGACCACCTCTCCCAACCCGTGTGGCTTGCAAAATGATCATTCATGGCCTGGTCTGCTCTaGGAGAAGCAGGGTGGCAAT +
Preference number: 5 (lower is better)
Translates to: VCGETTSPNPCGLQNDHSWPGLL*EKQGGN
Trigger: ATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCA...TGAATGATCATTTTGCAAGCCACACGGGTTGGGAGAGGTGGTCTCACCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp TTACGGATGAGGTGGCCTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGACCTGCTTCGATTCAGTaGTGTCTGGCATGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: LRMRWPGLLLEKQGGNSRPASIQ*CLACCQ
Trigger: CTGACAGCATGCCAGACACAACTGAATCGAAGCAGG...TCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAGGCCACCTCATCCGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp CTGGTCTGCTCTTGGAGAAGCAGGGTGGCAATAGTCGACAGGGCCAGTATTCTCTTGAGGAAACAGTCCTaGCTGTGGATGACGGTGATC +
Preference number: 5 (lower is better)
Translates to: LVCSWRSRVAIVDRASILLRKQS*LWMTVI
Trigger: GATCACCGTCATCCACAGCAAGGACTGTTTCCTCAA...GAGAATACTGGCCCTGTCGACTATTGCCACCCTGCTTCTCCAAGAGCAGACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp ATCCCTTGGTTCCATGATGTCCCCAGGTCACTCGGTGTGCAGCTTGGCACAGAAATCTTTTCCGTGGGTTaGAGGTGCCTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: IPWFHDVPRSLGVQLGTEIFSVG*RCLWIS
Trigger: TGAGATCCAGAGGCACCTCAAACCCACGGAAAAGAT...TTCTGTGCCAAGCTGCACACCGAGTGACCTGGGGACATCATGGAACCAAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCGTACAGCGTACCTGCTaGAGGCTGCAGTGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: VRDNDYVKATDRGVCLESVQRTC*RLQCQD
Trigger: GTCCTGACACTGCAGCCTCAAGCAGGTACGCTGTAC...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp TTGGGGAATGTGGGTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGACAGAGGTGTCTGCTaGGAGAGCAGGATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LGNVGKKTLAEMCSLCSADRGVC*ESRIPW
Trigger: CCAAGGGATCCTGCTCTCCAAGCAGACACCTCTGTC...AGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTACCCACATTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp TGCAGTAGTGCCAGCCTGTGGCCTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATATTTACCTCCCTGCATaGGTGACTTTGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: CSSASLWPSVLGSAVCVYIYLPA*VTLPPG
Trigger: CCCAGGAGGCAAAGTCACCAATGCAGGGAGGTAAAT...ATACACACACACTGCAGAACCCAGAACAGAAGGCCACAGGCTGGCACTACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS TCA 90 bp GTTTGGACATCTGAGTTGAGACATCCACGCCGTTTTTCAGCCAAGTaGTTCTGGGCATGGGAATGCCCTCAGCATGGCATCTTAGGCTGG +
Preference number: 5 (lower is better)
Translates to: VWTSELRHPRRFSAK*FWAWECPQHGILGW
Trigger: CCAGCCTAAGATGCCATGCTGAGGGCATTCCCATGCCCAGAATCACTTGGCTGAAAAACGGCGTGGATGTCTCAACTCAGATGTCCAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS TCA 90 bp TGGCAATGCAGGTGTATGCCCCTGTGTCTTCATACCGAACACTGCTaGTGTGGAGTTCGCTCCCATTGGCTAAAAGGGAGAGCTGTTTGG +
Preference number: 5 (lower is better)
Translates to: WQCRCMPLCLHTEHC*CGVRSHWLKGRAVW
Trigger: CCAAACAGCTCTCCCTTTTAGCCAATGGGAGCGAACTCCACATCAGCAGTGTTCGGTATGAAGACACAGGGGCATACACCTGCATTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS TCA 90 bp CAGTTTGTTGGTAGTCTCTGTCGGATGCTGCTCACAGGCATTCTCTaGGGTGCGACTCCAGGACTGATGAGAGAAAGCAGACATCCTACG +
Preference number: 5 (lower is better)
Translates to: QFVGSLCRMLLTGIL*GATPGLMRESRHPT
Trigger: CGTAGGATGTCTGCTTTCTCTCATCAGTCCTGGAGTCGCACCTCAGAGAATGCCTGTGAGCAGCATCCGACAGAGACTACCAACAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS GCA 90 bp GTGGTGGAACTGTCTACTGGGAGTTCATTTTTCTCTGGTGCCAGATaGCTGGGCCAGTTTGTTGGTAGTCTCTGTCGGATGCTGCTCACA +
Preference number: 5 (lower is better)
Translates to: VVELSTGSSFFSGAR*LGQFVGSLCRMLLT
Trigger: TGTGAGCAGCATCCGACAGAGACTACCAACAAACTGGCCCAGGCATCTGGCACCAGAGAAAAATGAACTCCCAGTAGACAGTTCCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS-3UTR CAA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCGCTGAGCTGAACCACTaGGAAGGCCATGTAGAACTC +
Preference number: 5 (lower is better)
Translates to: AGVKGAVCVESDTESRVSAELNH*EGHVEL
Trigger: GAGTTCTACATGGCCTTCCAAGTGGTTCAGCTCAGC...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCGTTTCCAGGTCCACCTaGTGGACTGCAGGATCAGAC +
Preference number: 5 (lower is better)
Translates to: VRDNDYVKATDRGVCLESVSRST*WTAGSD
Trigger: GTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAAC...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS TCA 90 bp GCTCCGTGTGCAGAGCCGCGTAGATGTTGTATTGATTGCTTTCAGTaGAGGAGCGCTGGAAGGCCAAGTCTGAGATGCCCGAGTTTATTT +
Preference number: 5 (lower is better)
Translates to: APCAEPRRCCIDCFQ*RSAGRPSLRCPSLF
Trigger: AAATAAACTCGGGCATCTCAGACTTGGCCTTCCAGCGCTCCTTCACTGAAAGCAATCAATACAACATCTACGCGGCTCTGCACACGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 90 bp GCTGCTGCTTCTCCTTCTTCATTGGCTAACATCTGCTGCTTGCTTTaGCACTATTCTTCAGCCTCCCTTCTGGACCCCAGAGCCTCATTC +
Preference number: 5 (lower is better)
Translates to: AAASPSSLANICCLL*HYSSASLLDPRASF
Trigger: GAATGAGGCTCTGGGGTCCAGAAGGGAGGCTGAAGAATAGTGTCAAAGCAAGCAGCAGATGTTAGCCAATGAAGAAGGAGAAGCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS TCA 90 bp GAAAGCAGACATCCTACGGGATGCCACTCTGACATGCTGGGCTGTTaGGATGTCTTGCATTTAGAATGCTGGGAAGAGGTCCTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: ESRHPTGCHSDMLGC*DVLHLECWEEVLVS
Trigger: TGAGACCAGGACCTCTTCCCAGCATTCTAAATGCAAGACATCTCAACAGCCCAGCATGTCAGAGTGGCATCCCGTAGGATGTCTGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CCA 90 bp AGGCCGATGGTCTTGAGGGGCATCATTGTTTCCAGGTCCACCTTGTaGACTGCAGGATCAGACTTGTTGAAGATGAAGCCAAACCTGATG +
Preference number: 5 (lower is better)
Translates to: RPMVLRGIIVSRSTL*TAGSDLLKMKPNLM
Trigger: CATCAGGTTTGGCTTCATCTTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp GTAAGGGACAATGACTATGTGAAGGCAACTGACAGAGGTGTCTGCTTGGAGAGCCCTGTTACATCACCATaGGGGCCAAGCACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: VRDNDYVKATDRGVCLESPVTSP*GPSTES
Trigger: AGACTCTGTGCTTGGCCCCAATGGTGATGTAACAGG...GCTCTCCAAGCAGACACCTCTGTCAGTTGCCTTCACATAGTCATTGTCCCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp GTAAGAAAACCCTCGCCGAAATGTGTTCTCTCTGCAGTGCTGATGCGGGGATGGACTTGTTCTGGTTTTTaGGGGTCCCAACACAGAACC +
Preference number: 5 (lower is better)
Translates to: VRKPSPKCVLSAVLMRGWTCSGF*GSQHRT
Trigger: GGTTCTGTGTTGGGACCCCAAAAAACCAGAACAAGT...CCATCCCCGCATCAGCACTGCAGAGAGAACACATTTCGGCGAGGGTTTTCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGACTTGGGGTTTCTGCATaGAGCCTGGAGGCCACCCAT +
Preference number: 5 (lower is better)
Translates to: CSKSCWLSLRLTASQMERLGVSA*SLEATH
Trigger: ATGGGTGGCCTCCAGGCTCAATGCAGAAACCCCAAG...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS TCA 90 bp TCCAGGACTGATGAGAGAAAGCAGACATCCTACGGGATGCCACTCTaGCATGCTGGGCTGTTGAGATGTCTTGCATTTAGAATGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SRTDERKQTSYGMPL*HAGLLRCLAFRMLG
Trigger: TCCCAGCATTCTAAATGCAAGACATCTCAACAGCCCAGCATGTCAGAGTGGCATCCCGTAGGATGTCTGCTTTCTCTCATCAGTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS-3UTR CAA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCACCCAACCAACTCTATaGGTTTTCCTGCCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: AGVKGAVCVESDTESRVSTQPTL*VFLPKG
Trigger: GCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS TCA 90 bp GTTGTATTGATTGCTTTCAGTGAAGGAGCGCTGGAAGGCCAAGTCTaGGATGCCCGAGTTTATTTGCAGGTCATACAGGGTCTGGATCTC +
Preference number: 5 (lower is better)
Translates to: VVLIAFSEGALEGQV*DARVYLQVIQGLDL
Trigger: GAGATCCAGACCCTGTATGACCTGCAAATAAACTCGGGCATCTCAGACTTGGCCTTCCAGCGCTCCTTCACTGAAAGCAATCAATACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS GCA 90 bp GATGGTCTTGAGGGGCATCATTGTTTCCAGGTCCACCTTGTGGACTaGAGGATCAGACTTGTTGAAGATGAAGCCAAACCTGATGTGGTT +
Preference number: 5 (lower is better)
Translates to: DGLEGHHCFQVHLVD*RIRLVEDEAKPDVV
Trigger: AACCACATCAGGTTTGGCTTCATCTTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS-3UTR CAA 90 bp CTTCTGTTCTGGGTTCTGCAGTGTGTGTGTATTGATTGGGGAATGTGGGTAAGAGTGCACGTGTCACCTTaGAGGAAACAGTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLFWVLQCVCIDWGMWVRVHVSP*RKQSLL
Trigger: CAGCAAGGACTGTTTCCTCAAAGGTGACACGTGCAC...TCTTACCCACATTCCCCAATCAATACACACACACTGCAGAACCCAGAACAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCATACCGGTTCCGGACATaGACTGCAGATACCCACTGG +
Preference number: 5 (lower is better)
Translates to: KSCWLSLRLTASQMERKAYRFRT*TADTHW
Trigger: CCAGTGGGTATCTGCAGTCAATGTCCGGAACCGGTA...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp GCAGGAGTGAAAGGAGCTGTGTGTGTTGAGAGTGACACAGAGTCTAGGGTTTCCACTGCAGGATCAGACTaGTTGAAGATGAAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: AGVKGAVCVESDTESRVSTAGSD*LKMKPN
Trigger: GTTTGGCTTCATCTTCAACAAGTCTGATCCTGCAGT...GGAAACCCTAGACTCTGTGTCACTCTCAACACACACAGCTCCTTTCACTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp GGTGAAGGTGGCCAAATTAGCAAAGACGTCTGTGGTGAGACCACCTCTCCCAACCGCGTAGATGTTGTATaGATTGCTTTCAGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: GEGGQISKDVCGETTSPNRVDVV*IAFSEG
Trigger: TCCTTCACTGAAAGCAATCAATACAACATCTACGCG...GTTGGGAGAGGTGGTCTCACCACAGACGTCTTTGCTAATTTGGCCACCTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGATTCAGGGTGAGCCCGTaGCGCTTCCAGATGATTGGT +
Preference number: 5 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGFRVSP*RFQMIG
Trigger: ACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAA...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp ACCCAACCAACTCTATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGATCTTTTCCGTGGGTTaGAGGTGCCTCTGGATCTCA +
Preference number: 5 (lower is better)
Translates to: TQPTLLVFLPKGIYLPALIFSVG*RCLWIS
Trigger: TGAGATCCAGAGGCACCTCAAACCCACGGAAAAGAT...CAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAGATGCCCGAGTTTATTaGCAGGTCATACAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CSKSCWLSLRLTASQMERDARVY*QVIQGL
Trigger: CAGACCCTGTATGACCTGCAAATAAACTCGGGCATC...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp TGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGATCCTCTCCAAAGTCATaGATGTCTTCCAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: CSKSCWLSLRLTASQMERSSPKS*MSSKSR
Trigger: CCTGGACTTGGAAGACATCAATGACTTTGGAGAGGA...TCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp AAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGAAAGAAAAGCATGGATGGTGGTCACCTaGGTGATGTACAGGGAATCA +
Preference number: 5 (lower is better)
Translates to: KSCWLSLRLTASQMERKAWMVVT*VMYRES
Trigger: TGATTCCCTGTACATCACCAAGGTGACCACCATCCA...TGCTTTTCTTTCCATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp ACCCAACCAACTCTATTGGTTTTCCTGCCAAAAGGCATTTACCTCCCTGCATTGACACCCACTTCATTTTaGGCAATGCAGGTGTATGCC +
Preference number: 5 (lower is better)
Translates to: TQPTLLVFLPKGIYLPALTPTSF*AMQVYA
Trigger: GGCATACACCTGCATTGCCAAAAATGAAGTGGGTGT...CAATGCAGGGAGGTAAATGCCTTTTGGCAGGAAAACCAATAGAGTTGGTTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp CCAAGATGCAGTAAGTCTTGTTGGCTCTCCCTCAGGCTTACAGCAAGTCAAATGGTGTTTTGTCTCCCATaGATGAGGAACAGTGACTCT +
Preference number: 5 (lower is better)
Translates to: PRCSKSCWLSLRLTASQMVFCLP*MRNSDS
Trigger: AGAGTCACTGTTCCTCATCAATGGGAGACAAAACAC...CATTTGACTTGCTGTAAGCCTGAGGGAGAGCCAACAAGACTTACTGCATCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCCCCAACCCGTGTGGCTaGCAAAATGATCATTCAAAC +
Preference number: 5 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSPNPCG*QNDHSN
Trigger: GTTTGAATGATCATTTTGCAAGCCACACGGGTTGGG...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp GTGTTGAGAGTGACACAGAGTCTAGGGTTTCCTCTCCTTGAAAGAGTTCATTCCAAGGAGCTGTGTGTGTaGAGAGTGACACAGAGTCTA +
Preference number: 5 (lower is better)
Translates to: VLRVTQSLGFPLLERVHSKELCV*RVTQSL
Trigger: TAGACTCTGTGTCACTCTCAACACACACAGCTCCTT...GGAATGAACTCTTTCAAGGAGAGGAAACCCTAGACTCTGTGTCACTCTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS-3UTR CAA 90 bp AAAAACCCCAATCTTGGTAGCAGCGCATACCTTATACTAGGAAACTTGCAAGGAGATGCCCGAGTTTATTaGCAGGTCATACAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: KNPNLGSSAYLILGNLQGDARVY*QVIQGL
Trigger: CAGACCCTGTATGACCTGCAAATAAACTCGGGCATC...TCCTTGCAAGTTTCCTAGTATAAGGTATGCGCTGCTACCAAGATTGGGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS-3UTR CAA 90 bp CCTTTACACAGCAGCATATGTTCTCATCGTAGCTCAAGGCATAAATCATACTTCTCCTCTCCAAAGTCATaGATGTCTTCCAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PLHSSICSHRSSRHKSYFSSPKS*MSSKSR
Trigger: CCTGGACTTGGAAGACATCAATGACTTTGGAGAGGA...GAAGTATGATTTATGCCTTGAGCTACGATGAGAACATATGCTGCTGTGTAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS CCA 72 bp TGGCGGCGGCGGCGACCCCGCCCCGCGTCCTTCGGCTaGTTTCTCGGGCTGTCGGCGGGTCCCGGGCTCGCT +
Preference number: 6 (lower is better)
Translates to: WRRRRPRPASFG*FLGLSAGPGLA
Trigger: AGCGAGCCCGGGACCCGCCGACAGCCCGAGAAACCAGCCGAAGGACGCGGGGCGGGGTCGCCGCCGCCGCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS CCA 72 bp CTGGTTTCTCGGGCTGTCGGCGGGTCCCGGGCTCGCTaGAGGCTGTTGAGGCTCCAGCTCCCTGAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: LVSRAVGGSRAR*RLLRLQLPEPP
Trigger: CGGCGGCTCAGGGAGCTGGAGCCTCAACAGCCTCCAGCGAGCCCGGGACCCGCCGACAGCCCGAGAAACCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265342.12
CDS CCA 72 bp CTCCCCCACACCCACATCCGGGCCTCTGCTGGTTCCTaGGTCCATCCATCCCAGCGCAGCCGGCAGGGAGGC +
Preference number: 6 (lower is better)
Translates to: LPHTHIRASAGS*VHPSQRSRQGG
Trigger: GCCTCCCTGCCGGCTGCGCTGGGATGGATGGACCCAGGAACCAGCAGAGGCCCGGATGTGGGTGTGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000621681.4
CDS CAA 90 bp GGCCAGTGTGTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATaGCCTCACCTGGGAAGCGCAAGGGGCCAGGGAGTTCCCTTTCCG +
Preference number: 6 (lower is better)
Translates to: GQCVRTVREPKQGEA*PHLGSARGQGVPFP
Trigger: CGGAAAGGGAACTCCCTGGCCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCACACACTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510685.1
CDS CAA 72 bp GTGCGCACCGTGCGCGAGCCGAAGCAGGGCGAGGCATaGCCTCACCTGGGAAGCGCAAGGGGCCAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: VRTVREPKQGEA*PHLGSARGQGV
Trigger: AACTCCCTGGCCCCTTGCGCTTCCCAGGTGAGGCAATGCCTCGCCCTGCTTCGGCTCGCGCACGGTGCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510685.1
CDS TCA 72 bp CCAGGCACTGGCATTCGGGCTCCCCTGTCTTCCTGCTaGGCACGCACCGGCTCCCTCGGCTGCAGAACTTCT +
Preference number: 6 (lower is better)
Translates to: PGTGIRAPLSSC*ARTGSLGCRTS
Trigger: AGAAGTTCTGCAGCCGAGGGAGCCGGTGCGTGCTCAGCAGGAAGACAGGGGAGCCCGAATGCCAGTGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000510685.1
CDS TCA 72 bp GCAGGTCATACAGGGTCTGGATCTCGCCCCGCACTGTaGTCTCCTGCACGTGCAGCCAGGGGCTGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: AGHTGSGSRPAL*SPARAARGCQL
Trigger: CAGCTGACAGCCCCTGGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGATCCAGACCCTGTATGACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS GCA 72 bp ATCAGAGCCGCACACAGGCACGTAGCTGGGCCTGCATaGCTCCAGGCACTGGCATTCGGGCTCCCCTGTCTT +
Preference number: 6 (lower is better)
Translates to: IRAAHRHVAGPA*LQALAFGLPCL
Trigger: AAGACAGGGGAGCCCGAATGCCAGTGCCTGGAGGCATGCAGGCCCAGCTACGTGCCTGTGTGCGGCTCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000510685.1
CDS GCA 72 bp TACAGGGTCTGGATCTCGCCCCGCACTGTGATCTCCTaGACGTGCAGCCAGGGGCTGTCAGCTGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: YRVWISPRTVIS*TCSQGLSAAAL
Trigger: CAGTGCTGCAGCTGACAGCCCCTGGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGATCCAGACCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CAA 90 bp GCCATGGCCTGGGGCACGCAGCCATGGTGGTGCAGGCCGATGGTCTaGAGGGGCATCATTGTTTCCAGGTCCACCTTGTGGACTGCAGGA +
Preference number: 6 (lower is better)
Translates to: AMAWGTQPWWCRPMV*RGIIVSRSTLWTAG
Trigger: TCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCTGCACCACCATGGCTGCGTGCCCCAGGCCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CAA 90 bp CATGCCCTCCAAGCAGTCGGCCCCTGGGCAGGGTCACACGCAGCATaGAACACACAAGAAACCGGCCACGTGGATGCATCTGGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: HALQAVGPWAGSHAA*NTQETGHVDASGAG
Trigger: GCCTGCACCAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAATGCTGCGTGTGACCCTGCCCAGGGGCCGACTGCTTGGAGGGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS GCA 72 bp CCACCAGGAGGCGCTTCTGGGAGGCAGGGTCTTGTCTaGTGTCTCCTTCTTGGAGTGGCTGCAGACGGGTCT +
Preference number: 6 (lower is better)
Translates to: PPGGASGRQGLV*CLLLGVAADGS
Trigger: AGACCCGTCTGCAGCCACTCCAAGAAGGAGACAGCAGACAAGACCCTGCCTCCCAGAAGCGCCTCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000514998.1
CDS GCA 72 bp GTCTGGATCTCGCCCCGCACTGTGATCTCCTGCACGTaGAGCCAGGGGCTGTCAGCTGCAGCACTGACTATG +
Preference number: 6 (lower is better)
Translates to: VWISPRTVISCT*SQGLSAAALTM
Trigger: CATAGTCAGTGCTGCAGCTGACAGCCCCTGGCTGCACGTGCAGGAGATCACAGTGCGGGGCGAGATCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp AAAACCTCCCATCAGAGCCGCACACAGGCACGTAGCTaGGCCTGCATGCCTCCAGGCACTGGCATTCGGGCT +
Preference number: 6 (lower is better)
Translates to: KTSHQSRTQARS*ACMPPGTGIRA
Trigger: AGCCCGAATGCCAGTGCCTGGAGGCATGCAGGCCCAGCTACGTGCCTGTGTGCGGCTCTGATGGGAGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000510685.1
CDS CCA 72 bp GTTCAGGGTGAGCCCGTTGCGCTTCCAGATGATTGGTaGCCTCAGGTCTCCATGGACGGCGCAGGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: VQGEPVALPDDW*PQVSMDGAGQH
Trigger: GTGCTGACCTGCGCCGTCCATGGAGACCTGAGGCCACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000621681.4
CDS CCA 72 bp ACACGGATGACTGGCGGCACATTCACCTGCAGGACGTaGGTCTGGAACAGCTGCTCGTGGCCGGAAGCATGG +
Preference number: 6 (lower is better)
Translates to: TRMTGGTFTCRT*VWNSCSWPEAW
Trigger: CCATGCTTCCGGCCACGAGCAGCTGTTCCAGACCCACGTCCTGCAGGTGAATGTGCCGCCAGTCATCCGTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000621681.4
CDS TCA 72 bp GGGGCACGCAGCCATGGTGGTGCAGGCCGATGGTCTTaGGGGGCATCATTGTTTCCAGGTCCACCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: GARSHGGAGRWS*GASLFPGPPCG
Trigger: TCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCTGCACCACCATGGCTGCGTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp ATGACTGGCGGCACTGTGGGTGAGAGTCAGTGCTGGTaGGAAAGAGACGGCCCTGACCTGGACTTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: MTGGTVGESQCW*ERDGPDLDLGL
Trigger: CAGGCCCAAGTCCAGGTCAGGGCCGTCTCTTTCTCACCAGCACTGACTCTCACCCACAGTGCCGCCAGTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CCA 72 bp GAAGTTCAGGGTGAGCCCGTTGCGCTTCCAGATGATTaGTGGCCTCAGGTCTCCATGGACGGCGCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: EVQGEPVALPDD*WPQVSMDGAGQ
Trigger: CTGACCTGCGCCGTCCATGGAGACCTGAGGCCACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000621681.4
CDS CCA 72 bp AACATGTTTCCCACGCTGAGGCCTGGGAGGAGCAAATaGAATGGGCATGCCCTCCAAGCAGTCGGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: NMFPTLRPGRSK*NGHALQAVGPW
Trigger: CCAGGGGCCGACTGCTTGGAGGGCATGCCCATTCCATTTGCTCCTCCCAGGCCTCAGCGTGGGAAACATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CAA 72 bp TGGGGCACGCAGCCATGGTGGTGCAGGCCGATGGTCTaGAGGGGCATCATTGTTTCCAGGTCCACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: WGTQPWWCRPMV*RGIIVSRSTLW
Trigger: CCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCTGCACCACCATGGCTGCGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp AAGCAGTCGGCCCCTGGGCAGGGTCACACGCAGCATTaGACACACAAGAAACCGGCCACGTGGATGCATCTG +
Preference number: 6 (lower is better)
Translates to: KQSAPGQGHTQH*THKKPATWMHL
Trigger: CAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAATGCTGCGTGTGACCCTGCCCAGGGGCCGACTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS GCA 72 bp CTGGGCTTGGATGTCGACCACAAGGACTCTGCTCAGTaGTGGCTGGGCCACATAGATGTACCGGTTCCGGAC +
Preference number: 6 (lower is better)
Translates to: LGLDVDHKDSAQ*WLGHIDVPVPD
Trigger: GTCCGGAACCGGTACATCTATGTGGCCCAGCCAGCACTGAGCAGAGTCCTTGTGGTCGACATCCAAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp ACTCCTGCAAAGGGTGTGCGGATGAGGTGCTGGCTCTaGCCGGTGCTGGCTTCTGTGATCACCTGGAGACTT +
Preference number: 6 (lower is better)
Translates to: TPAKGVRMRCWL*PVLASVITWRL
Trigger: AAGTCTCCAGGTGATCACAGAAGCCAGCACCGGCCAGAGCCAGCACCTCATCCGCACACCCTTTGCAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp AGCACTGACTATGAAGCGCCCGTCGGGGGATGTGTGTaGGGTGCCTGTTACATCACCATTGGGGCCAAGCAC +
Preference number: 6 (lower is better)
Translates to: STDYEAPVGGCV*GACYITIGAKH
Trigger: GTGCTTGGCCCCAATGGTGATGTAACAGGCACCCCACACACATCCCCCGACGGGCGCTTCATAGTCAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CAA 72 bp CAAGCAGTCGGCCCCTGGGCAGGGTCACACGCAGCATaGAACACACAAGAAACCGGCCACGTGGATGCATCT +
Preference number: 6 (lower is better)
Translates to: QAVGPWAGSHAA*NTQETGHVDAS
Trigger: AGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAATGCTGCGTGTGACCCTGCCCAGGGGCCGACTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CAA 90 bp CAGGAGGCGCTTCTGGGAGGCAGGGTCTTGTCTGCTGTCTCCTTCTaGGAGTGGCTGCAGACGGGTCTGGAGTGCCAGAAGGACATTCTT +
Preference number: 6 (lower is better)
Translates to: QEALLGGRVLSAVSF*EWLQTGLECQKDIL
Trigger: AAGAATGTCCTTCTGGCACTCCAGACCCGTCTGCAGCCACTCCAAGAAGGAGACAGCAGACAAGACCCTGCCTCCCAGAAGCGCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265342.12
ENST00000514998.1
CDS TCA 72 bp CTGGCTGGGCCACATAGATGTACCGGTTCCGGACATTaGCTGCAGATACCCACTGGCAGGGCTGGGTTGCAT +
Preference number: 6 (lower is better)
Translates to: LAGPHRCTGSGH*LQIPTGRAGLH
Trigger: ATGCAACCCAGCCCTGCCAGTGGGTATCTGCAGTCAATGTCCGGAACCGGTACATCTATGTGGCCCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS GCA 72 bp GCCTGGGCCAGTTTGTTGGTAGTCTCTGTCGGATGCTaGTCACAGGCATTCTCTGAGGTGCGACTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: AWASLLVVSVGC*SQAFSEVRLQD
Trigger: GTCCTGGAGTCGCACCTCAGAGAATGCCTGTGAGCAGCATCCGACAGAGACTACCAACAAACTGGCCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CCA 72 bp AGCCAAGTGATTCTGGGCATGGGAATGCCCTCAGCATaGCATCTTAGGCTGGCTGCCACTCCAGGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: SQVILGMGMPSA*HLRLAATPGSC
Trigger: ACAGGAGCCTGGAGTGGCAGCCAGCCTAAGATGCCATGCTGAGGGCATTCCCATGCCCAGAATCACTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp ACTCCTGCAAAGGGTGTGCGGATGAGGTGCTGGCTCTaGCCGGTGCTGGCTTCTGTGATCACCTTCTCAACA +
Preference number: 6 (lower is better)
Translates to: TPAKGVRMRCWL*PVLASVITFST
Trigger: TGTTGAGAAGGTGATCACAGAAGCCAGCACCGGCCAGAGCCAGCACCTCATCCGCACACCCTTTGCAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS TCA 72 bp CTGTTACATCACCATTGGGGCCAAGCACAGAGTCTGTaGCACTGTCAACGAGCAGCTGTCGGGCAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LLHHHWGQAQSL*HCQRAAVGQQR
Trigger: CCTCTGCTGCCCGACAGCTGCTCGTTGACAGTGTCACAGACTCTGTGCTTGGCCCCAATGGTGATGTAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS GCA 72 bp CGCTGGAAGGCCAAGTCTGAGATGCCCGAGTTTATTTaGAGGTCATACAGGGTCTGGATCTCGCCCCGCACT +
Preference number: 6 (lower is better)
Translates to: RWKAKSEMPEFI*RSYRVWISPRT
Trigger: AGTGCGGGGCGAGATCCAGACCCTGTATGACCTGCAAATAAACTCGGGCATCTCAGACTTGGCCTTCCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS GCA 72 bp GATGCCTGGGCCAGTTTGTTGGTAGTCTCTGTCGGATaGTGCTCACAGGCATTCTCTGAGGTGCGACTCCAG +
Preference number: 6 (lower is better)
Translates to: DAWASLLVVSVG*CSQAFSEVRLQ
Trigger: CTGGAGTCGCACCTCAGAGAATGCCTGTGAGCAGCATCCGACAGAGACTACCAACAAACTGGCCCAGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CCA 72 bp GGGTCCACACCTATGGACTGTAGGACTTTCTGGGCTTaGATGTCGACCACAAGGACTCTGCTCAGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: GSTPMDCRTFWA*MSTTRTLLSAG
Trigger: GCCAGCACTGAGCAGAGTCCTTGTGGTCGACATCCAAGCCCAGAAAGTCCTACAGTCCATAGGTGTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp GAGATGCCCGAGTTTATTTGCAGGTCATACAGGGTCTaGATCTCGCCCCGCACTGTGATCTCCTGCACGTGC +
Preference number: 6 (lower is better)
Translates to: EMPEFICRSYRV*ISPRTVISCTC
Trigger: GCACGTGCAGGAGATCACAGTGCGGGGCGAGATCCAGACCCTGTATGACCTGCAAATAAACTCGGGCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp AAATGGAATGGGCATGCCCTCCAAGCAGTCGGCCCCTaGGCAGGGTCACACGCAGCATTGAACACACAAGAA +
Preference number: 6 (lower is better)
Translates to: KWNGHALQAVGP*AGSHAALNTQE
Trigger: TTCTTGTGTGTTCAATGCTGCGTGTGACCCTGCCCAGGGGCCGACTGCTTGGAGGGCATGCCCATTCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CAA 72 bp CCTGACACCTCACACCGCAGCGTGTTTTGTCTCCCATaGATGAGGAACAGTGACTCTCGGGCTGGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: PDTSHRSVFCLP*MRNSDSRAGVR
Trigger: CCTCACACCAGCCCGAGAGTCACTGTTCCTCATCAATGGGAGACAAAACACGCTGCGGTGTGAGGTGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CAA 90 bp AAGTCATTGATGTCTTCCAAGTCCAGGAAGTTCAGGGTGAGCCCGTaGCGCTTCCAGATGATTGGTGGCCTCAGGTCTCCATGGACGGCG +
Preference number: 6 (lower is better)
Translates to: KSLMSSKSRKFRVSP*RFQMIGGLRSPWTA
Trigger: CGCCGTCCATGGAGACCTGAGGCCACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAACTTCCTGGACTTGGAAGACATCAATGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000621681.4
CDS GCA 72 bp GAACACACAAGAAACCGGCCACGTGGATGCATCTGGTaGAGGCACGAGATGCAATTCCTTCCTCTCGCCACA +
Preference number: 6 (lower is better)
Translates to: EHTRNRPRGCIW*RHEMQFLPLAT
Trigger: TGTGGCGAGAGGAAGGAATTGCATCTCGTGCCTGCACCAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CAA 72 bp ATGTCTTCCAAGTCCAGGAAGTTCAGGGTGAGCCCGTaGCGCTTCCAGATGATTGGTGGCCTCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: MSSKSRKFRVSP*RFQMIGGLRSP
Trigger: TGGAGACCTGAGGCCACCAATCATCTGGAAGCGCAACGGGCTCACCCTGAACTTCCTGGACTTGGAAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000621681.4
CDS CAA 72 bp GTCCGGCTCCGTGTGCAGAGCCGCGTAGATGTTGTATaGATTGCTTTCAGTGAAGGAGCGCTGGAAGGCCAA +
Preference number: 6 (lower is better)
Translates to: VRLRVQSRVDVV*IAFSEGALEGQ
Trigger: TTGGCCTTCCAGCGCTCCTTCACTGAAAGCAATCAATACAACATCTACGCGGCTCTGCACACGGAGCCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CAA 72 bp ACGCACCTGGAAAATCGGGTCACTCCCACCCGAATATaGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACC +
Preference number: 6 (lower is better)
Translates to: THLENRVTPTRI*RFSDRLKKRRT
Trigger: GGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510685.1
CDS TCA 72 bp GCAGAGCCGCGTAGATGTTGTATTGATTGCTTTCAGTaGAGGAGCGCTGGAAGGCCAAGTCTGAGATGCCCG +
Preference number: 6 (lower is better)
Translates to: AEPRRCCIDCFQ*RSAGRPSLRCP
Trigger: CGGGCATCTCAGACTTGGCCTTCCAGCGCTCCTTCACTGAAAGCAATCAATACAACATCTACGCGGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp GGTAGTCTCTGTCGGATGCTGCTCACAGGCATTCTCTaGGGTGCGACTCCAGGACTGATGAGAGAAAGCAGA +
Preference number: 6 (lower is better)
Translates to: GSLCRMLLTGIL*GATPGLMRESR
Trigger: TCTGCTTTCTCTCATCAGTCCTGGAGTCGCACCTCAGAGAATGCCTGTGAGCAGCATCCGACAGAGACTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS GCA 72 bp CTGGGCCACATAGATGTACCGGTTCCGGACATTGACTaGAGATACCCACTGGCAGGGCTGGGTTGCATTTTT +
Preference number: 6 (lower is better)
Translates to: LGHIDVPVPDID*RYPLAGLGCIF
Trigger: AAAAATGCAACCCAGCCCTGCCAGTGGGTATCTGCAGTCAATGTCCGGAACCGGTACATCTATGTGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS GCA 72 bp CGCAGCATTGAACACACAAGAAACCGGCCACGTGGATaGATCTGGTGCAGGCACGAGATGCAATTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: RSIEHTRNRPRG*IWCRHEMQFLP
Trigger: AGGAAGGAATTGCATCTCGTGCCTGCACCAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAATGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS GCA 72 bp TCTCTGTCGGATGCTGCTCACAGGCATTCTCTGAGGTaGGACTCCAGGACTGATGAGAGAAAGCAGACATCC +
Preference number: 6 (lower is better)
Translates to: SLSDAAHRHSLR*DSRTDERKQTS
Trigger: GGATGTCTGCTTTCTCTCATCAGTCCTGGAGTCGCACCTCAGAGAATGCCTGTGAGCAGCATCCGACAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CCA 72 bp CAGAACTTCTTCCCGCAGGAGGCCAGCAGCTCGTTGTaGCTGGAAAGCCCTTCTCTTCTTGTGACTTCAAAG +
Preference number: 6 (lower is better)
Translates to: QNFFPQEASSSL*LESPSLLVTSK
Trigger: CTTTGAAGTCACAAGAAGAGAAGGGCTTTCCAGCCACAACGAGCTGCTGGCCTCCTGCGGGAAGAAGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000510685.1
ENST00000621681.4
CDS CCA 72 bp ATTGAACACACAAGAAACCGGCCACGTGGATGCATCTaGTGCAGGCACGAGATGCAATTCCTTCCTCTCGCC +
Preference number: 6 (lower is better)
Translates to: IEHTRNRPRGCI*CRHEMQFLPLA
Trigger: GGCGAGAGGAAGGAATTGCATCTCGTGCCTGCACCAGATGCATCCACGTGGCCGGTTTCTTGTGTGTTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509525.5
CDS CAA 90 bp CCCTTTATACCTGACACCTCACACCGCAGCGTGTTTTGTCTCCCATaGATGAGGAACAGTGACTCTCGGGCTGGTGTGAGGAGGTACTGT +
Preference number: 6 (lower is better)
Translates to: PFIPDTSHRSVFCLP*MRNSDSRAGVRRYC
Trigger: ACAGTACCTCCTCACACCAGCCCGAGAGTCACTGTTCCTCATCAATGGGAGACAAAACACGCTGCGGTGTGAGGTGTCAGGTATAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp TCTGAGTTGAGACATCCACGCCGTTTTTCAGCCAAGTaGTTCTGGGCATGGGAATGCCCTCAGCATGGCATC +
Preference number: 6 (lower is better)
Translates to: SELRHPRRFSAK*FWAWECPQHGI
Trigger: GATGCCATGCTGAGGGCATTCCCATGCCCAGAATCACTTGGCTGAAAAACGGCGTGGATGTCTCAACTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS CAA 72 bp CATTTTTCTCTGGTGCCAGATGCCTGGGCCAGTTTGTaGGTAGTCTCTGTCGGATGCTGCTCACAGGCATTC +
Preference number: 6 (lower is better)
Translates to: HFSLVPDAWASL*VVSVGCCSQAF
Trigger: GAATGCCTGTGAGCAGCATCCGACAGAGACTACCAACAAACTGGCCCAGGCATCTGGCACCAGAGAAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CAA 90 bp TGCAGGCCGATGGTCTTGAGGGGCATCATTGTTTCCAGGTCCACCTaGTGGACTGCAGGATCAGACTTGTTGAAGATGAAGCCAAACCTG +
Preference number: 6 (lower is better)
Translates to: CRPMVLRGIIVSRST*WTAGSDLLKMKPNL
Trigger: CAGGTTTGGCTTCATCTTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCATCGGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp AGGTGTATGCCCCTGTGTCTTCATACCGAACACTGCTaGTGTGGAGTTCGCTCCCATTGGCTAAAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: RCMPLCLHTEHC*CGVRSHWLKGR
Trigger: TCTCCCTTTTAGCCAATGGGAGCGAACTCCACATCAGCAGTGTTCGGTATGAAGACACAGGGGCATACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS GCA 72 bp CTGTCTACTGGGAGTTCATTTTTCTCTGGTGCCAGATaGCTGGGCCAGTTTGTTGGTAGTCTCTGTCGGATG +
Preference number: 6 (lower is better)
Translates to: LSTGSSFFSGAR*LGQFVGSLCRM
Trigger: CATCCGACAGAGACTACCAACAAACTGGCCCAGGCATCTGGCACCAGAGAAAAATGAACTCCCAGTAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CCA 72 bp TATGCCCCTGTGTCTTCATACCGAACACTGCTGATGTaGAGTTCGCTCCCATTGGCTAAAAGGGAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: YAPVSSYRTLLM*SSLPLAKRESC
Trigger: ACAGCTCTCCCTTTTAGCCAATGGGAGCGAACTCCACATCAGCAGTGTTCGGTATGAAGACACAGGGGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp CTCCCATTGGCTAAAAGGGAGAGCTGTTTGGACATCTaGGTTGAGACATCCACGCCGTTTTTCAGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: LPLAKRESCLDI*VETSTPFFSQV
Trigger: CACTTGGCTGAAAAACGGCGTGGATGTCTCAACTCAGATGTCCAAACAGCTCTCCCTTTTAGCCAATGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp ATTGCTTTCAGTGAAGGAGCGCTGGAAGGCCAAGTCTaGGATGCCCGAGTTTATTTGCAGGTCATACAGGGT +
Preference number: 6 (lower is better)
Translates to: IAFSEGALEGQV*DARVYLQVIQG
Trigger: ACCCTGTATGACCTGCAAATAAACTCGGGCATCTCAGACTTGGCCTTCCAGCGCTCCTTCACTGAAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS GCA 72 bp GAGGGGCATCATTGTTTCCAGGTCCACCTTGTGGACTaGAGGATCAGACTTGTTGAAGATGAAGCCAAACCT +
Preference number: 6 (lower is better)
Translates to: EGHHCFQVHLVD*RIRLVEDEAKP
Trigger: AGGTTTGGCTTCATCTTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp GGAGTTCGCTCCCATTGGCTAAAAGGGAGAGCTGTTTaGACATCTGAGTTGAGACATCCACGCCGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: GVRSHWLKGRAV*TSELRHPRRFS
Trigger: TGAAAAACGGCGTGGATGTCTCAACTCAGATGTCCAAACAGCTCTCCCTTTTAGCCAATGGGAGCGAACTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265342.12
ENST00000507112.1
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp GTCTTGAGGGGCATCATTGTTTCCAGGTCCACCTTGTaGACTGCAGGATCAGACTTGTTGAAGATGAAGCCA +
Preference number: 6 (lower is better)
Translates to: VLRGIIVSRSTL*TAGSDLLKMKP
Trigger: TGGCTTCATCTTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS TCA 72 bp GATGAGAGAAAGCAGACATCCTACGGGATGCCACTCTaGCATGCTGGGCTGTTGAGATGTCTTGCATTTAGA +
Preference number: 6 (lower is better)
Translates to: DERKQTSYGMPL*HAGLLRCLAFR
Trigger: TCTAAATGCAAGACATCTCAACAGCCCAGCATGTCAGAGTGGCATCCCGTAGGATGTCTGCTTTCTCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CAA 72 bp ATGGTCTTGAGGGGCATCATTGTTTCCAGGTCCACCTaGTGGACTGCAGGATCAGACTTGTTGAAGATGAAG +
Preference number: 6 (lower is better)
Translates to: MVLRGIIVSRST*WTAGSDLLKMK
Trigger: CTTCATCTTCAACAAGTCTGATCCTGCAGTCCACAAGGTGGACCTGGAAACAATGATGCCCCTCAAGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp CTCATGAAAATCTTTTCCGTGGGTTTGAGGTGCCTCTaGATCTCACAGTCCACAGGATGGATGACGATGATA +
Preference number: 6 (lower is better)
Translates to: LMKIFSVGLRCL*ISQSTGWMTMI
Trigger: TATCATCGTCATCCATCCTGTGGACTGTGAGATCCAGAGGCACCTCAAACCCACGGAAAAGATTTTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265342.12
ENST00000509525.5
ENST00000621681.4
CDS CCA 72 bp AAGTGGGAGAGGGCTGTCAATCATGAAAATGTCACGTaGTGGAACTGTCTACTGGGAGTTCATTTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: KWERAVNHENVT*WNCLLGVHFSL
Trigger: CAGAGAAAAATGAACTCCCAGTAGACAGTTCCACCACGTGACATTTTCATGATTGACAGCCCTCTCCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511375.1
CDS CCA 72 bp CAATGGATTGAGCATTTAGTTGTGCTTTTCTCCCATTaGGGTGAGGCTTGTAAAGTCAGGTTAGTTACAAAA +
Preference number: 6 (lower is better)
Translates to: QWIEHLVVLFSH*GEACKVRLVTK
Trigger: TTTTGTAACTAACCTGACTTTACAAGCCTCACCCCAATGGGAGAAAAGCACAACTAAATGCTCAATCCATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507112.1