RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FSD1L (Homo sapiens)

Ensembl gene IDs: ENSG00000106701

Ensembl transcript IDs: ENST00000374707.1, ENST00000394926.7, ENST00000469022.5, ENST00000480279.1, ENST00000481272.6, ENST00000484973.5, ENST00000495708.5

Found 458 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCATGTATACTCCTCCAGCCCCTGATTAATATATGCATTTCCCCATaGCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTA +
Preference number: 1 (lower is better)
Translates to: SCILLQPLINICISP*PCNRGPSPLQQCSV
Trigger: TACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATATTAATCAGGGGCTGGAGGAGTATACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 90 bp AGGGCCCTCACCACTACAACAATGCTCTGTAGCTTAAACATCAGTTaGCACTGCATGGGGCATGGACCAAGAGTATGCTTAGAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: RALTTTTMLCSLNIS*HCMGHGPRVCLEEK
Trigger: TTTTTCCTCTAAGCATACTCTTGGTCCATGCCCCATGCAGTGTCAACTGATGTTTAAGCTACAGAGCATTGTTGTAGTGGTGAGGGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 90 bp CAAGCCAAAGCAAACACATTCACGTGCCTTCTGCTCTACATACTGTaGAATCCTCTTCATGTCCATTCCCATGGACCAGCTTACATTGAA +
Preference number: 1 (lower is better)
Translates to: QAKANTFTCLLLYIL*NPLHVHSHGPAYIE
Trigger: TTCAATGTAAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAAGGCACGTGAATGTGTTTGCTTTGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 90 bp AAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTaGTTAGTAACTGCACAGAAAAGGCCACCTAATCAAGACGGAGGG +
Preference number: 1 (lower is better)
Translates to: KQNTANLIFTTTKFL*LVTAQKRPPNQDGG
Trigger: CCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
3UTR GCA 90 bp AACTTAATAAGCTCCAAGCCAAAGCAAACACATTCACGTGCCTTCTaGTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGAC +
Preference number: 1 (lower is better)
Translates to: NLISSKPKQTHSRAF*STYCEILFMSIPMD
Trigger: GTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAAGGCACGTGAATGTGTTTGCTTTGGCTTGGAGCTTATTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CCA 90 bp ATATCATTTATCCGTGACAACAAGCTGCCCAGCCATTTGGTTGTTTaGAAAGAACTGTTTAGACCAAATACACTCTTTGCATGTGGCACT +
Preference number: 1 (lower is better)
Translates to: ISFIRDNKLPSHLVV*KELFRPNTLFACGT
Trigger: AGTGCCACATGCAAAGAGTGTATTTGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGATAAATGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 90 bp AAAGTTGTCAAATGTTCAGTGGTTACATTTTATATCATTTATCCGTaGCAACAAGCTGCCCAGCCATTTGGTTGTTTGGAAAGAACTGTT +
Preference number: 1 (lower is better)
Translates to: KVVKCSVVTFYIIYP*QQAAQPFGCLERTV
Trigger: AACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGATAAATGATATAAAATGTAACCACTGAACATTTGACAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR GCA 90 bp ATGTTCAGTGGTTACATTTTATATCATTTATCCGTGACAACAAGCTaGCCAGCCATTTGGTTGTTTGGAAAGAACTGTTTAGACCAAATA +
Preference number: 1 (lower is better)
Translates to: MFSGYILYHLSVTTS*PAIWLFGKNCLDQI
Trigger: TATTTGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGATAAATGATATAAAATGTAACCACTGAACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CCA 90 bp TACATTTTATATCATTTATCCGTGACAACAAGCTGCCCAGCCATTTaGTTGTTTGGAAAGAACTGTTTAGACCAAATACACTCTTTGCAT +
Preference number: 1 (lower is better)
Translates to: YILYHLSVTTSCPAI*LFGKNCLDQIHSLH
Trigger: ATGCAAAGAGTGTATTTGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGATAAATGATATAAAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR GCA 90 bp ATTCATTTATTTATGCCACTATTCTACACTGACACAACAATGCTGTaGAAGAGCTTTTACAGCTCTAGAGTAATAGGCTTGAGAAAATAC +
Preference number: 1 (lower is better)
Translates to: IHLFMPLFYTDTTML*KSFYSSRVIGLRKY
Trigger: GTATTTTCTCAAGCCTATTACTCTAGAGCTGTAAAAGCTCTTGCACAGCATTGTTGTGTCAGTGTAGAATAGTGGCATAAATAAATGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCGCAAACCACCCACCTTaGCTTCCCATAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLANHPP*LPIVLG
Trigger: TCCCAGCACTATGGGAAGCCAAGGTGGGTGGTTTGC...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
3UTR-3UTR CCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGACACTGCATGGGGCATaGACCAAGAGTATGCTTAGA +
Preference number: 2 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMTLHGA*TKSMLR
Trigger: TCTAAGCATACTCTTGGTCCATGCCCCATGCAGTGT...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGTCAGTTGACACTGCATaGGGCATGGACCAAGAGTAT +
Preference number: 2 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMSVDTA*GMDQEY
Trigger: ATACTCTTGGTCCATGCCCCATGCAGTGTCAACTGA...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR TCA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCGCCACTATTCTACACTaGCACAACAATGCTGTGCAA +
Preference number: 2 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSATILH*HNNAVQ
Trigger: TTGCACAGCATTGTTGTGTCAGTGTAGAATAGTGGC...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR GCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTATATGCATTTCCCCATaGCCCTGCAACAGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLICISP*PCNRGP
Trigger: GGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATAT...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR GCA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCACCTTTCTAACACAATaGAGCTCACTACATACTCCA +
Preference number: 2 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLTFLTQ*SSLHTP
Trigger: TGGAGTATGTAGTGAGCTGCATTGTGTTAGAAAGGT...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
3UTR-3UTR GCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCATGGACCAAGAGTATaGTTAGAGGAAAAAGGCACT +
Preference number: 2 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMHGPRV*LEEKGT
Trigger: AGTGCCTTTTTCCTCTAAGCATACTCTTGGTCCATG...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR TCA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCGAGAAAACAAACCTCTaGATGAATGGCTGCTTGAAA +
Preference number: 2 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSEKTNL*MNGCLK
Trigger: TTTCAAGCAGCCATTCATTCAGAGGTTTGTTTTCTC...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR GCA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTATGTTAATTAAACACTaGCTTTTCCCCCATTTACTC +
Preference number: 2 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCMLIKH*LFPHLL
Trigger: GAGTAAATGGGGGAAAAGGCAGTGTTTAATTAACAT...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR GCA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCATAAGTCCACCTATGTaGATTAGTAAGCTTCTTTAC +
Preference number: 2 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLISPPM*ISKLLY
Trigger: GTAAAGAAGCTTACTAATGCACATAGGTGGACTTAT...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
3UTR-3UTR TCA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCGTATGGATTAGCCAATaGATGGAGACTCATCTTTTA +
Preference number: 2 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSVWISQ*METHLL
Trigger: TAAAAGATGAGTCTCCATTCATTGGCTAATCCATAC...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp GTAGAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTGCCTCCCCAACTGGTaGTCAGAGTGTCTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: VEYVILSIKEHLYLPEPKCLPNW*SECLLR
Trigger: TCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCA...CTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
3UTR-3UTR CCA 90 bp GTAGAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGGTTTGCCTCCCCAACTaGTGGTCAGAGTGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: VEYVILSIKEHLYLPEPKVCLPN*WSECLL
Trigger: CAGCAGACACTCTGACCACCAGTTGGGGAGGCAAAC...CTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
3UTR CAA 90 bp GCCATTTGGTTGTTTGGAAAGAACTGTTTAGACCAAATACACTCTTaGCATGTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCT +
Preference number: 2 (lower is better)
Translates to: AIWLFGKNCLDQIHS*HVALGSPNFKVQMP
Trigger: AGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCACATGCAAAGAGTGTATTTGGTCTAAACAGTTCTTTCCAAACAACCAAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCAGTGTCACATTCAAGTaGGAATTTTACCAAACACAA +
Preference number: 2 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSSVTFK*EFYQTQ
Trigger: TTGTGTTTGGTAAAATTCCCACTTGAATGTGACACT...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCCATGTGATGAGAATTTaGACTGGATTTACTGAACTT +
Preference number: 2 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSHVMRI*TGFTEL
Trigger: AAGTTCAGTAAATCCAGTCCAAATTCTCATCACATG...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCACACTGCATGGGGCATaGACCAAGAGTATGCTTAGA +
Preference number: 2 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFTLHGA*TKSMLR
Trigger: TCTAAGCATACTCTTGGTCCATGCCCCATGCAGTGT...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR GCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTAGCTGCAAAACTCTATaGACAGTCCATCAAACTTCA +
Preference number: 2 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLSCKTL*TVHQTS
Trigger: TGAAGTTTGATGGACTGTGCATAGAGTTTTGCAGCT...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTGTAATGGTCACTCCTTaGAAGAAGGTTGGTTATCAT +
Preference number: 2 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLVMVTP*KKVGYH
Trigger: ATGATAACCAACCTTCTTCCAAGGAGTGACCATTAC...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR GCA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACAATACACTGATAGTTTaGCTCCCCAACTGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYNTLIV*LPNWWS
Trigger: TGACCACCAGTTGGGGAGGCAAACTATCAGTGTATT...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
3UTR-3UTR TCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAAGAACACAGCAAACCTaGTTTTCACTACTACCAAAT +
Preference number: 2 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLRTQQT*FSLLPN
Trigger: ATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCT...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
3UTR-3UTR TCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCAGCTTAAACATCAGTTaGCACTGCATGGGGCATGGA +
Preference number: 2 (lower is better)
Translates to: HAYCKIHTKLNYTEREVISLNIS*HCMGHG
Trigger: TCCATGCCCCATGCAGTGTCAACTGATGTTTAAGCT...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CAA 90 bp GCAAGCCAATATGTCTCTCTTCATAACATAGGGAAAAATTACTGTTaGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: ASQYVSLHNIGKNYC*HNRVNRQSLAIQQQ
Trigger: CTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTAATTTTTCCCTATGTTATGAAGAGAGACATATTGGCTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR TCA 90 bp GTAGAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTCAATGATTGTCAACTaGAAAGGCACAGCAGATTCA +
Preference number: 2 (lower is better)
Translates to: VEYVILSIKEHLYLPEPKSMIVN*KGTADS
Trigger: TGAATCTGCTGTGCCTTTTCAGTTGACAATCATTGA...CTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
3UTR-3UTR GCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTTGCACAGTAGGTTCCTaGAAATGCTTCGTACTAGGT +
Preference number: 2 (lower is better)
Translates to: SRVIGLRKYKKATSHAQICTVGS*KCFVLG
Trigger: ACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCA...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CAA 90 bp ATTTTATATCATTTATCCGTGACAACAAGCTGCCCAGCCATTTGGTaGTTTGGAAAGAACTGTTTAGACCAAATACACTCTTTGCATGTG +
Preference number: 2 (lower is better)
Translates to: ILYHLSVTTSCPAIW*FGKNCLDQIHSLHV
Trigger: CACATGCAAAGAGTGTATTTGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGATAAATGATATAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR TCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTTGGACCAGCTTACATTaGATGGGTACCACTAAGAAA +
Preference number: 2 (lower is better)
Translates to: SRVIGLRKYKKATSHAQIWTSLH*MGTTKK
Trigger: TTTCTTAGTGGTACCCATTCAATGTAAGCTGGTCCA...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCGTTTTACCCCAAGTTTaGGAAAGATATCTATGTCAA +
Preference number: 2 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFVLPQV*ERYLCQ
Trigger: TTGACATAGATATCTTTCCCAAACTTGGGGTAAAAC...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CAA 90 bp TTACATTTTATATCATTTATCCGTGACAACAAGCTGCCCAGCCATTaGGTTGTTTGGAAAGAACTGTTTAGACCAAATACACTCTTTGCA +
Preference number: 2 (lower is better)
Translates to: LHFISFIRDNKLPSH*VVWKELFRPNTLFA
Trigger: TGCAAAGAGTGTATTTGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGATAAATGATATAAAATGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR TCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTACTACCAAATTCCTGTaGTTAGTAACTGCACAGAAA +
Preference number: 2 (lower is better)
Translates to: SRVIGLRKYKKATSHAQITTKFL*LVTAQK
Trigger: TTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGT...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTAAAGACATAATGACATaGTCAGCCATGAGAGTCAAA +
Preference number: 2 (lower is better)
Translates to: SRVIGLRKYKKATSHAQIKDIMT*SAMRVK
Trigger: TTTGACTCTCATGGCTGACCATGTCATTATGTCTTT...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTATGCTAACTCTGATGTaGCATATCCAACAATATCTT +
Preference number: 2 (lower is better)
Translates to: SRVIGLRKYKKATSHAQIMLTLM*HIQQYL
Trigger: AAGATATTGTTGGATATGCCACATCAGAGTTAGCAT...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CAA 90 bp AGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGGAGCAAACCACCCACCTaGGCTTCCCATAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: RVQQCNHSSVQPQLPRLRSKPPT*ASHSAG
Trigger: CCCAGCACTATGGGAAGCCAAGGTGGGTGGTTTGCT...CCTGAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
3UTR GCA 72 bp CTCCTCCAGCCCCTGATTAATATATGCATTTCCCCATaGCCCTGCAACAGAGGGCCCTCACCACTACAACAA +
Preference number: 3 (lower is better)
Translates to: LLQPLINICISP*PCNRGPSPLQQ
Trigger: TTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATATTAATCAGGGGCTGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CAA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGAGTAATGGTCACTCCTaGGAAGAAGGTTGGTTATCA +
Preference number: 3 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMSNGHS*EEGWLS
Trigger: TGATAACCAACCTTCTTCCAAGGAGTGACCATTACT...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CAA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCCGTAGCACTTTGCTGTaGCTGAAGCAATTTCACATA +
Preference number: 3 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSRSTLL*LKQFHI
Trigger: TATGTGAAATTGCTTCAGCAACAGCAAAGTGCTACG...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 72 bp GCAAACACATTCACGTGCCTTCTGCTCTACATACTGTaGAATCCTCTTCATGTCCATTCCCATGGACCAGCT +
Preference number: 3 (lower is better)
Translates to: ANTFTCLLLYIL*NPLHVHSHGPA
Trigger: AGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAAGGCACGTGAATGTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 72 bp ACCACTACAACAATGCTCTGTAGCTTAAACATCAGTTaGCACTGCATGGGGCATGGACCAAGAGTATGCTTA +
Preference number: 3 (lower is better)
Translates to: TTTTMLCSLNIS*HCMGHGPRVCL
Trigger: TAAGCATACTCTTGGTCCATGCCCCATGCAGTGTCAACTGATGTTTAAGCTACAGAGCATTGTTGTAGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR GCA 72 bp AGCTCCAAGCCAAAGCAAACACATTCACGTGCCTTCTaGTCTACATACTGTGAAATCCTCTTCATGTCCATT +
Preference number: 3 (lower is better)
Translates to: SSKPKQTHSRAF*STYCEILFMSI
Trigger: AATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAAGGCACGTGAATGTGTTTGCTTTGGCTTGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CCA 72 bp TTTCAAAATACACTGATAGTTTGCCTCCCCAACTGGTaGTCAGAGTGTCTGCTGAGAGGAAACATGCATTCT +
Preference number: 3 (lower is better)
Translates to: FQNTLIVCLPNW*SECLLRGNMHS
Trigger: AGAATGCATGTTTCCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495708.5
3UTR-3UTR CAA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCAAATACACTGATAGTTaGCCTCCCCAACTGGTGGTC +
Preference number: 3 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSKYTDS*PPQLVV
Trigger: GACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
3UTR CCA 72 bp ATCCGTGACAACAAGCTGCCCAGCCATTTGGTTGTTTaGAAAGAACTGTTTAGACCAAATACACTCTTTGCA +
Preference number: 3 (lower is better)
Translates to: IRDNKLPSHLVV*KELFRPNTLFA
Trigger: TGCAAAGAGTGTATTTGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR GCA 72 bp TTTATGCCACTATTCTACACTGACACAACAATGCTGTaGAAGAGCTTTTACAGCTCTAGAGTAATAGGCTTG +
Preference number: 3 (lower is better)
Translates to: FMPLFYTDTTML*KSFYSSRVIGL
Trigger: CAAGCCTATTACTCTAGAGCTGTAAAAGCTCTTGCACAGCATTGTTGTGTCAGTGTAGAATAGTGGCATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CCA 72 bp CTTCATGTCCATTCCCATGGACCAGCTTACATTGAATaGGTACCACTAAGAAAAGATACCAGTTTAAACTCA +
Preference number: 3 (lower is better)
Translates to: LHVHSHGPAYIE*VPLRKDTSLNS
Trigger: TGAGTTTAAACTGGTATCTTTTCTTAGTGGTACCCATTCAATGTAAGCTGGTCCATGGGAATGGACATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 72 bp ACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTaGTTAGTAACTGCACAGAAAAGGCCACCTAATCAA +
Preference number: 3 (lower is better)
Translates to: TANLIFTTTKFL*LVTAQKRPPNQ
Trigger: TTGATTAGGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
3UTR TCA 72 bp CTGAACTTACACTATTATTACAAAACCTCTCAGAGATaGAACCTCTCCAGTGGAGAGGTTTTCCAAATGAAT +
Preference number: 3 (lower is better)
Translates to: LNLHYYYKTSQR*NLSSGEVFQMN
Trigger: ATTCATTTGGAAAACCTCTCCACTGGAGAGGTTTCATCTCTGAGAGGTTTTGTAATAATAGTGTAAGTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR TCA 72 bp AAATGTTCAGTGGTTACATTTTATATCATTTATCCGTaGCAACAAGCTGCCCAGCCATTTGGTTGTTTGGAA +
Preference number: 3 (lower is better)
Translates to: KCSVVTFYIIYP*QQAAQPFGCLE
Trigger: TTCCAAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGATAAATGATATAAAATGTAACCACTGAACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR-3UTR CAA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCCTCCTTGGAAGAAGGTaGGTTATCATAGCACAATAT +
Preference number: 3 (lower is better)
Translates to: HAYCKIHTKLNYTEREVILLGRR*VIIAQY
Trigger: ATATTGTGCTATGATAACCAACCTTCTTCCAAGGAG...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGGCAGAAGGGAGGGGCTaGGGAGCGCACCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERAEGRG*GAHRAC
Trigger: GCAGGCGCGGTGCGCTCCTCAGCCCCTCCCTTCTGC...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp AGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGGGGAGTCCATGGCGAGTaGCTAAGCCCACTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RVQQCNHSSVQPQLPRLRGVHGE*LSPLGS
Trigger: CGAGCCCAGTGGGCTTAGCCACTCGCCATGGACTCC...CCTGAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR TCA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTAGACGACGAACCGTGTaGGGAGGCTCAGCGAGATCG +
Preference number: 4 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCRRRTV*GGSARS
Trigger: CGATCTCGCTGAGCCTCCTCACACGGTTCGTCGTCT...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR GCA 90 bp CTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGAAACATGAAGACCGCTACTCACTaGACTGCCCCAGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: LIVCLPNWWSECLLRGNMKTATH*TAPART
Trigger: GGTGCGGGCTGGGGCAGTGCAGTGAGTAGCGGTCTT...CATGTTTCCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGGGAGTCCATGGCGAGTaGCTAAGCCCACTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMGVHGE*LSPLGS
Trigger: CGAGCCCAGTGGGCTTAGCCACTCGCCATGGACTCC...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR TCA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGCGGTCTCTCCGGCCCTaGAATAGGCCACTGGGCATC +
Preference number: 4 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERRSLRP*NRPLGI
Trigger: GATGCCCAGTGGCCTATTTCAGGGCCGGAGAGACCG...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCCTTTCTGGGAGTCCATaGCGAGTGGCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLLSGSP*RVAKPT
Trigger: AGTGGGCTTAGCCACTCGCCATGGACTCCCAGAAAG...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CCA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGCCTGAAATAGGCCACTaGGCATCCAGCAGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERPEIGH*ASSSRP
Trigger: CGGCCGGCTGCTGGATGCCCAGTGGCCTATTTCAGG...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGCCGCGGTTGCCAGGGTaGAAGGGCGGCCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAEPRLPG*KGGPQK
Trigger: CTTCTGCGGGCCGCCCTTTCACCCTGGCAACCGCGG...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp TACAGTGCTCATGTGCATAAAGTGATGATGCTTTCCCAAGCAGCTCATAGACAGCGCTACTCACTGCACTaGCCCAGCCCGCACCGGCAC +
Preference number: 4 (lower is better)
Translates to: YSAHVHKVMMLSQAAHRQRYSLH*PSPHRH
Trigger: GTGCCGGTGCGGGCTGGGGCAGTGCAGTGAGTAGCG...CTGTCTATGAGCTGCTTGGGAAAGCATCATCACTTTATGCACATGAGCACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CCA 90 bp AGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGGTGTAGAGCTTCTTTCTaGGAGTCCATGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: RVQQCNHSSVQPQLPRLRCRASF*ESMASG
Trigger: GCCACTCGCCATGGACTCCCAGAAAGAAGCTCTACA...CCTGAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CCA 90 bp AGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGGCAGCCTTCGAGTAGCTaGGACTACAGGTGCACATCA +
Preference number: 4 (lower is better)
Translates to: RVQQCNHSSVQPQLPRLRQPSSS*DYRCTS
Trigger: TGATGTGCACCTGTAGTCCCAGCTACTCGAAGGCTG...CCTGAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR TCA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCCCTGCGCGCAGCGGCTaGCTGCTCCCGGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSPARSG*LLPGSS
Trigger: GCTACTTCCCGGGAGCAGTCAGCCGCTGCGCGCAGG...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGCGCGCAGCGGCTGACTaGTCCCGGGAAGTAGCCGTG +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAERAAAD*SREVAV
Trigger: CACGGCTACTTCCCGGGAGCAGTCAGCCGCTGCGCG...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp GTAGAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGGGAGCGCACCGCGCCTaGGCGCAGCGGCTGACTGCT +
Preference number: 4 (lower is better)
Translates to: VEYVILSIKEHLYLPEPKGAHRA*AQRLTA
Trigger: AGCAGTCAGCCGCTGCGCGCAGGCGCGGTGCGCTCC...CTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGAGTAGCCGTGGAGGGTaGGGAGCGCCGCCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAESSRGG*GAPPVC
Trigger: ACAGACGGGCGGCGCTCCCCACCCTCCACGGCTACT...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp CTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGAAACATGTGCCTCCCCAACTGGTaGTCAGAGTGTCTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LIVCLPNWWSECLLRGNMCLPNW*SECLLR
Trigger: TCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCA...CATGTTTCCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTAGCTTAAACATCAGTTaGCACTGCATGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCSLNIS*HCMGHG
Trigger: TCCATGCCCCATGCAGTGTCAACTGATGTTTAAGCT...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCACAACAGCCCTGTaGGGCAGGCTGAACAACTTA +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMLTTAL*GRLNNL
Trigger: TAAGTTGTTCAGCCTGCCTCACAGGGCTGTTGTGAG...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCCGCTACTCACTGCACTaGCCCAGCCCGCACCGGCAC +
Preference number: 4 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSRYSLH*PSPHRH
Trigger: GTGCCGGTGCGGGCTGGGGCAGTGCAGTGAGTAGCG...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp TACAGTGCTCATGTGCATAAAGTGATGATGCTTTCCCAAGCAGCTCATAGACAGAAGACCGCTACTCACTaGACTGCCCCAGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: YSAHVHKVMMLSQAAHRQKTATH*TAPART
Trigger: GGTGCGGGCTGGGGCAGTGCAGTGAGTAGCGGTCTT...CTGTCTATGAGCTGCTTGGGAAAGCATCATCACTTTATGCACATGAGCACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR GCA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGGATCTCATCATGTTaGCCAAGCTGGCCTCAAACT +
Preference number: 4 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLRISSC*PSWPQT
Trigger: AGTTTGAGGCCAGCTTGGGCAACATGATGAGATCCT...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CCA 90 bp CTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGAAACATGATTTCTGGGAGTCCATaGCGAGTGGCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: LIVCLPNWWSECLLRGNMISGSP*RVAKPT
Trigger: AGTGGGCTTAGCCACTCGCCATGGACTCCCAGAAAT...CATGTTTCCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp TACAGTGCTCATGTGCATAAAGTGATGATGCTTTCCCAAGCAGCTCATAGACAGAGACGACGAACCGTGTaGGGAGGCTCAGCGAGATCG +
Preference number: 4 (lower is better)
Translates to: YSAHVHKVMMLSQAAHRQRRRTV*GGSARS
Trigger: CGATCTCGCTGAGCCTCCTCACACGGTTCGTCGTCT...CTGTCTATGAGCTGCTTGGGAAAGCATCATCACTTTATGCACATGAGCACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR GCA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTTGCACAGTAGGTTCCTaGAAATGCTTCGTACTAGGT +
Preference number: 4 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCCTVGS*KCFVLG
Trigger: ACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCA...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTCGCTACTCACTGCACTaGCCCAGCCCGCACCGGCAC +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLIRYSLH*PSPHRH
Trigger: GTGCCGGTGCGGGCTGGGGCAGTGCAGTGAGTAGCG...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR TCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGAGACGACGAACCGTGTaGGGAGGCTCAGCGAGATCG +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAERRRTV*GGSARS
Trigger: CGATCTCGCTGAGCCTCCTCACACGGTTCGTCGTCT...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCTTGCCAGAGTTGAAATaGTCCTCTGTAGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLLPELK*SSVELL
Trigger: AAGAAGCTCTACAGAGGATCATTTCAACTCTGGCAA...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR GCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATCTACTGCCTCTTACTaGTGGTGGCCTGGAGCCTAC +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRSTASY*WWPGAY
Trigger: GTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGTAGA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGTGTTCGTTTTGGGGATaGTGTACCACTTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMCSFWG*CTTSAL
Trigger: AAGGGCAGAAGTGGTACACCATCCCCAAAACGAACA...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGGAGTCCATGGCGAGTaGCTAAGCCCACTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATGVHGE*LSPLGS
Trigger: CGAGCCCAGTGGGCTTAGCCACTCGCCATGGACTCC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCTTAAAGCAGTATTTCTaGGAGTCCATGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSLKQYF*ESMASG
Trigger: GCCACTCGCCATGGACTCCCAGAAATACTGCTTTAA...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR TCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGTACTCCTCCAGCCCCTaGTTAATATATGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMYSSSP*LIYAFP
Trigger: GGGAAATGCATATATTAATCAGGGGCTGGAGGAGTA...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp CTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGAAACATGCTGTCTGGCAGCCTTTaGAAATTCTTCAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LIVCLPNWWSECLLRGNMLSGSL*KFFRFL
Trigger: AAGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAG...CATGTTTCCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGTGCACAGTAGGTTCCTaGAAATGCTTCGTACTAGGT +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMCTVGS*KCFVLG
Trigger: ACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCA...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGGCAAACACATTCACGTaGCTTCTGCTCTACATACTG +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMANTFT*LLLYIL
Trigger: CAGTATGTAGAGCAGAAGGCACGTGAATGTGTTTGC...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCAAGACCGCTACTCACTaGACTGCCCCAGCCCGCACC +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCKTATH*TAPART
Trigger: GGTGCGGGCTGGGGCAGTGCAGTGAGTAGCGGTCTT...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR CCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTGCCTCTTACTGCTGGTaGCCTGGAGCCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLASYCW*PGAYRC
Trigger: ACATCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGC...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGACTGCCTCTTACTGCTaGTGGCCTGGAGCCTACAGA +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVTASYC*WPGAYR
Trigger: TCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGT...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTGTAATGGTCACTCCTTaGAAGAAGGTTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCVMVTP*KKVGYH
Trigger: ATGATAACCAACCTTCTTCCAAGGAGTGACCATTAC...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACGGAGTCCATGGCGAGTaGCTAAGCCCACTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYGVHGE*LSPLGS
Trigger: CGAGCCCAGTGGGCTTAGCCACTCGCCATGGACTCC...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATGTAGAGCTTCTTTCTaGGAGTCCATGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRCRASF*ESMASG
Trigger: GCCACTCGCCATGGACTCCCAGAAAGAAGCTCTACA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000484973.5
CDS-3UTR CCA 90 bp AGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGGACTCTGAGAGTATGTTaGACGAATTTTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RVQQCNHSSVQPQLPRLRTLRVC*TNFPEL
Trigger: GAGTTCAGGAAAATTCGTCCAACATACTCTCAGAGT...CCTGAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CCA 90 bp TACAGTGCTCATGTGCATAAAGTGATGATGCTTTCCCAAGCAGCTCATAGACAGGCAAACCACCCACCTTaGCTTCCCATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YSAHVHKVMMLSQAAHRQANHPP*LPIVLG
Trigger: TCCCAGCACTATGGGAAGCCAAGGTGGGTGGTTTGC...CTGTCTATGAGCTGCTTGGGAAAGCATCATCACTTTATGCACATGAGCACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGACGACGAACCGTGTaGGGAGGCTCAGCGAGATCG +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIRRRTV*GGSARS
Trigger: CGATCTCGCTGAGCCTCCTCACACGGTTCGTCGTCT...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAAGACGACGAACCGTGTaGGGAGGCTCAGCGAGATCG +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTRRRTV*GGSARS
Trigger: CGATCTCGCTGAGCCTCCTCACACGGTTCGTCGTCT...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCTGTTACAGAGTTATCTaGCACCAAACACTCTACTGG +
Preference number: 4 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSCYRVI*HQTLYW
Trigger: CCAGTAGAGTGTTTGGTGGCAGATAACTCTGTAACA...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAACTGCCTCTTACTGCTaGTGGCCTGGAGCCTACAGA +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLTASYC*WPGAYR
Trigger: TCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGT...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTGGAGTCCATGGCGAGTaGCTAAGCCCACTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISGVHGE*LSPLGS
Trigger: CGAGCCCAGTGGGCTTAGCCACTCGCCATGGACTCC...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCTCCAAAGATGTAAGGTaGCAAATGTTACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLSKDVR*QMLPSQ
Trigger: TTGAGAAGGTAACATTTGCCACCTTACATCTTTGGA...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR TCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTCACCACACCATACCATaGAACCAGGTAGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLHHTIP*NQVVLA
Trigger: AGCCAGTACTACCTGGTTTCATGGTATGGTGTGGTG...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGCACCACACCATACCATaGAACCAGGTAGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVHHTIP*NQVVLA
Trigger: AGCCAGTACTACCTGGTTTCATGGTATGGTGTGGTG...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCATATGCATTTCCCCATaGCCCTGCAACAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATICISP*PCNRGP
Trigger: GGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATAT...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp AGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGGTTACGAGCTTGTTCCTaGTTGATACAGTTAATCATA +
Preference number: 4 (lower is better)
Translates to: RVQQCNHSSVQPQLPRLRLRACS*LIQLII
Trigger: TATGATTAACTGTATCAAGCAGGAACAAGCTCGTAA...CCTGAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR GCA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGTGTAGAGCTTCCTGCTaGAAGTTAATAGACTCTGGT +
Preference number: 4 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERCRASC*KLIDSG
Trigger: ACCAGAGTCTATTAACTTGCAGCAGGAAGCTCTACA...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGCCTCTTACTGCTGGTaGCCTGGAGCCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATASYCW*PGAYRC
Trigger: ACATCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATGTTCTCACAGCACTTaGAACCTGCATCCCAGTACT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRCSHST*NLHPST
Trigger: AGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTCTTTGCATGTGGCACTaGGCAGCCCTAACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLLCMWH*AALTSK
Trigger: CTTTGAAGTTAGGGCTGCCCAGTGCCACATGCAAAG...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGTACACTCTTTGCATGTaGCACTGGGCAGCCCTAACT +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVYTLCM*HWAALT
Trigger: AGTTAGGGCTGCCCAGTGCCACATGCAAAGAGTGTA...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATACTGGATCTATCTCTaGAGCTTTGGGGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRYWIYL*SFGDWQ
Trigger: TTGCCAGTCCCCAAAGCTCCAGAGATAGATCCAGTA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATGTTCGTTTTGGGGATaGTGTACCACTGCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRCSFWG*CTTALV
Trigger: AACAAGGGCAGTGGTACACCATCCCCAAAACGAACA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484973.5
CDS-3UTR TCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGAATCCTTCTGGGCCTTaGCCTCCCAATAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVNPSGP*PPNNVV
Trigger: GACAACATTATTGGGAGGTCAAGGCCCAGAAGGATT...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTAGCTTAAACATCAGTTaGCACTGCATGGGGCATGGA +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLSLNIS*HCMGHG
Trigger: TCCATGCCCCATGCAGTGTCAACTGATGTTTAAGCT...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTAGAAAGGCGAAAGGCTaGAGCCATTGTGACTCTATC +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLRKAKG*SHCDSI
Trigger: GATAGAGTCACAATGGCTTCAGCCTTTCGCCTTTCT...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATTGCCAGAGTTGAAATaGTCCTCTGTAGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRLPELK*SSVELP
Trigger: AGGAAGCTCTACAGAGGATCATTTCAACTCTGGCAA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR GCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCCCCAACGTTTTGTATaGTACTCCCACACTGTAGGA +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLPQRFV*YSHTVG
Trigger: TCCTACAGTGTGGGAGTAGCATACAAAACGTTGGGG...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR GCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGCCCCAACGTTTTGTATaGTACTCCCACACTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVPQRFV*YSHTVG
Trigger: TCCTACAGTGTGGGAGTAGCATACAAAACGTTGGGG...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTATATGCATTTCCCCATaGCCCTGCAACAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIICISP*PCNRGP
Trigger: GGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATAT...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCGCCTCTTACTGCTGGTaGCCTGGAGCCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCASYCW*PGAYRC
Trigger: ACATCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGC...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTACACTGCATGGGGCATaGACCAAGAGTATGCTTAGA +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLTLHGA*TKSMLR
Trigger: TCTAAGCATACTCTTGGTCCATGCCCCATGCAGTGT...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTTCAGTTGACACTGCATaGGGCATGGACCAAGAGTAT +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLSVDTA*GMDQEY
Trigger: ATACTCTTGGTCCATGCCCCATGCAGTGTCAACTGA...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGAAAGACATAATGACATaGTCAGCCATGAGAGTCAAA +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMKDIMT*SAMRVK
Trigger: TTTGACTCTCATGGCTGACCATGTCATTATGTCTTT...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACACTTTCTGGGAGTCCATaGCGAGTGGCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTLSGSP*RVAKPT
Trigger: AGTGGGCTTAGCCACTCGCCATGGACTCCCAGAAAG...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000484973.5
CDS-3UTR CCA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACGTTTGCCTCCCCAACTaGTGGTCAGAGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYVCLPN*WSECLL
Trigger: CAGCAGACACTCTGACCACCAGTTGGGGAGGCAAAC...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCGTCCCCACACATTTGTaGGTTTTACCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAVPTHL*VLPPGA
Trigger: AGCTCCTGGAGGTAAAACTCACAAATGTGTGGGGAC...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374707.1
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTTCCCAGCACTGTGTATaGTTCTCCAGTAAAACGATC +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLSQHCV*FSSKTI
Trigger: GATCGTTTTACTGGAGAATCATACACAGTGCTGGGA...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGACTGCTCTACATACTGTaGAATCCTCTTCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRLLYIL*NPLHVH
Trigger: ATGGACATGAAGAGGATTTCACAGTATGTAGAGCAG...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTCCCTGTGAGGCAGGCTaGACAACTTACACTTATTTT +
Preference number: 4 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLPCEAG*TTYTYF
Trigger: AAAATAAGTGTAAGTTGTTCAGCCTGCCTCACAGGG...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTCTCACAACAGCCCTGTaGGGCAGGCTGAACAACTTA +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVILTTAL*GRLNNL
Trigger: TAAGTTGTTCAGCCTGCCTCACAGGGCTGTTGTGAG...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGGCCACTATTCTACACTaGCACAACAATGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVATILH*HNNAVQ
Trigger: TTGCACAGCATTGTTGTGTCAGTGTAGAATAGTGGC...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTTATATCATTTATCCGTaGCAACAAGCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLYIIYP*QQAAQP
Trigger: TGGCTGGGCAGCTTGTTGTCACGGATAAATGATATA...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTATCCGTGACAACAAGCTaGCCAGCCATTTGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLSVTTS*PAIWLF
Trigger: AAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGA...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGACTTTCAGGTTCAAATaGGATGAGGAGTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERTFRFK*DEELSK
Trigger: TTTGGATAACTCCTCATCCCATTTGAACCTGAAAGT...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCTTACTGCTGGTGGCCTaGAGCCTACAGATGTTCGTT +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATLLLVA*SLQMFV
Trigger: AACGAACATCTGTAGGCTCCAGGCCACCAGCAGTAA...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAACTGCCTCTTACTGCTaGTGGCCTGGAGCCTACAGA +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTETASYC*WPGAYR
Trigger: TCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGT...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTATGTTCTCACAGCACTTaGAACCTGCATCCCAGTACT +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLCSHST*NLHPST
Trigger: AGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACA...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCATGTGATGAGAATTTaGACTGGATTTACTGAACTT +
Preference number: 4 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMHVMRI*TGFTEL
Trigger: AAGTTCAGTAAATCCAGTCCAAATTCTCATCACATG...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCCTTTGCATGTGGCACTaGGCAGCCCTAACTTCAAAG +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFLCMWH*AALTSK
Trigger: CTTTGAAGTTAGGGCTGCCCAGTGCCACATGCAAAG...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTCTTTCTGGGAGTCCATaGCGAGTGGCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISLSGSP*RVAKPT
Trigger: AGTGGGCTTAGCCACTCGCCATGGACTCCCAGAAAG...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000484973.5
CDS-3UTR CCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACATGTAGAGCTTCTTTCTaGGAGTCCATGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTCRASF*ESMASG
Trigger: GCCACTCGCCATGGACTCCCAGAAAGAAGCTCTACA...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000484973.5
CDS-3UTR CCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGTTAAAGCAGTATTTCTaGGAGTCCATGGCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAELKQYF*ESMASG
Trigger: GCCACTCGCCATGGACTCCCAGAAATACTGCTTTAA...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGACAGGTTCAAATGGGATaGGGAGTTATCCAAATTGAA +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRQVQMG*GVIQIE
Trigger: TTCAATTTGGATAACTCCTCATCCCATTTGAACCTG...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCAATCCTTCTGGGCCTTaGCCTCCCAATAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKANPSGP*PPNNVV
Trigger: GACAACATTATTGGGAGGTCAAGGCCCAGAAGGATT...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTCACCACACCATACCATaGAACCAGGTAGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIHHTIP*NQVVLA
Trigger: AGCCAGTACTACCTGGTTTCATGGTATGGTGTGGTG...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCGTTCAGGCTGCTAGCTaGACCAGTCATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAVQAAS*TSHSIF
Trigger: GAAAATGGAATGACTGGTTCAGCTAGCAGCCTGAAC...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCGTTCAGGCTGCTAGCTaGACCAGTCATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFVQAAS*TSHSIF
Trigger: GAAAATGGAATGACTGGTTCAGCTAGCAGCCTGAAC...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGTTCAGGCTGCTAGCTaGACCAGTCATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATVQAAS*TSHSIF
Trigger: GAAAATGGAATGACTGGTTCAGCTAGCAGCCTGAAC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATCTGCTTGCTTCTATaGTACTGCACAGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLICLLL*YCTVGS
Trigger: GGAACCTACTGTGCAGTATCATAGAAGCAAGCAGAT...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGAGAGAAAACAAACCTCTaGATGAATGGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSREKTNL*MNGCLK
Trigger: TTTCAAGCAGCCATTCATTCAGAGGTTTGTTTTCTC...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTCTGCTCTACATACTGTaGAATCCTCTTCATGTCCAT +
Preference number: 4 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLLLYIL*NPLHVH
Trigger: ATGGACATGAAGAGGATTTCACAGTATGTAGAGCAG...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTGTTAGAAATCACTGGTaGTACCACTTTAAGCACACG +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLVRNHW*YHFKHT
Trigger: CGTGTGCTTAAAGTGGTATCACCAGTGATTTCTAAC...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCAGAAAGGCGAAAGGCTaGAGCCATTGTGACTCTATC +
Preference number: 4 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSRKAKG*SHCDSI
Trigger: GATAGAGTCACAATGGCTTCAGCCTTTCGCCTTTCT...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGTGTTACAGAGTTATCTaGCACCAAACACTCTACTGG +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVCYRVI*HQTLYW
Trigger: CCAGTAGAGTGTTTGGTGGCAGATAACTCTGTAACA...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTCTACTGCCTCTTACTaGTGGTGGCCTGGAGCCTAC +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKSTASY*WWPGAY
Trigger: GTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGTAGA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTACCAAATACACTCTTTaGATGTGGCACTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLITKYTL*MWHWAA
Trigger: GGCTGCCCAGTGCCACATGCAAAGAGTGTATTTGGT...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGTTACGAGCTTGTTCCTaGTTGATACAGTTAATCATA +
Preference number: 4 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERLRACS*LIQLII
Trigger: TATGATTAACTGTATCAAGCAGGAACAAGCTCGTAA...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGCACCAAACACTCTACTaGATCTATCTCTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVHQTLY*IYLWSF
Trigger: AAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTG...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTTTACTGCTGGTGGCCTaGAGCCTACAGATGTTCGTT +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLILLLVA*SLQMFV
Trigger: AACGAACATCTGTAGGCTCCAGGCCACCAGCAGTAA...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGACTGCCTCTTACTGCTaGTGGCCTGGAGCCTACAGA +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKTASYC*WPGAYR
Trigger: TCTGTAGGCTCCAGGCCACCAGCAGTAAGAGGCAGT...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGAAGCCAGTTGTTGACATaGATACACCAACTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRSQLLT*IHQLVF
Trigger: AAACACTAGTTGGTGTATCCATGTCAACAACTGGCT...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCTACTGGATCTATCTCTaGAGCTTTGGGGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATYWIYL*SFGDWQ
Trigger: TTGCCAGTCCCCAAAGCTCCAGAGATAGATCCAGTA...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTATTTCTGGGAGTCCATaGCGAGTGGCTAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISISGSP*RVAKPT
Trigger: AGTGGGCTTAGCCACTCGCCATGGACTCCCAGAAAT...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR TCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGCAGGTTCAAATGGGATaGGGAGTTATCCAAATTGAA +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVQVQMG*GVIQIE
Trigger: TTCAATTTGGATAACTCCTCATCCCATTTGAACCTG...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCAGGTTCAAATGGGATaGGGAGTTATCCAAATTGAA +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLQVQMG*GVIQIE
Trigger: TTCAATTTGGATAACTCCTCATCCCATTTGAACCTG...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCTCCCAGCACTGTGTATaGTTCTCCAGTAAAACGATC +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFSQHCV*FSSKTI
Trigger: GATCGTTTTACTGGAGAATCATACACAGTGCTGGGA...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCCATTTTCACTTTTCTaGAGTGTTCTCACAGCACTT +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLPFSLF*SVLTAL
Trigger: AAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGG...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTGTTCAGGCTGCTAGCTaGACCAGTCATTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLIVQAAS*TSHSIF
Trigger: GAAAATGGAATGACTGGTTCAGCTAGCAGCCTGAAC...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCTGAGTAGACACTATTaGGTAACAACATTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLLSRHY*VTTLFR
Trigger: CCTGAACAATGTTGTTACTCAATAGTGTCTACTCAG...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTACCCATCACCTAAAGTaGTGGAATGAAAAGAACTGT +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLTHHLK*WNEKNC
Trigger: ACAGTTCTTTTCATTCCATCACTTTAGGTGATGGGT...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGCAGGCCCATTACATGTaGCTATATAAAAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVQAHYM*LYKSEP
Trigger: TGGTTCACTTTTATATAGTCACATGTAATGGGCCTG...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCGCACTTTGCTGTTGCTaGAGCAATTTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAALCCC*SNFTYS
Trigger: GGAGTATGTGAAATTGCTTCAGCAACAGCAAAGTGC...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCTATATCATTTATCCGTaGCAACAAGCTGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFYIIYP*QQAAQP
Trigger: TGGCTGGGCAGCTTGTTGTCACGGATAAATGATATA...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCCTGTCTGGCAGCCTTTaGAAATTCTTCAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKALSGSL*KFFRFL
Trigger: AAGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAG...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAAGAAAGGCGAAAGGCTaGAGCCATTGTGACTCTATC +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTRKAKG*SHCDSI
Trigger: GATAGAGTCACAATGGCTTCAGCCTTTCGCCTTTCT...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTTGCCAGAGTTGAAATaGTCCTCTGTAGAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSLPELK*SSVELP
Trigger: AGGAAGCTCTACAGAGGATCATTTCAACTCTGGCAA...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTATGTTACAGAGTTATCTaGCACCAAACACTCTACTGG +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLCYRVI*HQTLYW
Trigger: CCAGTAGAGTGTTTGGTGGCAGATAACTCTGTAACA...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR GCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGCAAACACATTCACGTaGCTTCTGCTCTACATACTG +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATANTFT*LLLYIL
Trigger: CAGTATGTAGAGCAGAAGGCACGTGAATGTGTTTGC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAGACACAACAATGCTGTaGAAGAGCTTTTACAGCTCT +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLDTTML*KSFYSS
Trigger: AGAGCTGTAAAAGCTCTTGCACAGCATTGTTGTGTC...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTACCAAATACACTCTTTaGATGTGGCACTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISTKYTL*MWHWAA
Trigger: GGCTGCCCAGTGCCACATGCAAAGAGTGTATTTGGT...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACATCCGTGACAACAAGCTaGCCAGCCATTTGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTSVTTS*PAIWLF
Trigger: AAACAACCAAATGGCTGGGCAGCTTGTTGTCACGGA...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCAATACACTGATAGTTTaGCTCCCCAACTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSNTLIV*LPNWWS
Trigger: TGACCACCAGTTGGGGAGGCAAACTATCAGTGTATT...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGCACCAAACACTCTACTaGATCTATCTCTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAEHQTLY*IYLWSF
Trigger: AAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTG...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGACTCATCCTTTACACGTaGAAGTCCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRLILYT*KSIKIS
Trigger: ACTAATTTTGATGGACTTCCACGTGTAAAGGATGAG...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATATGTTCGTTTTGGGGATaGTGTACCACTTCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: MILHSRFLQMLRTRCLMICSFWG*CTTSAL
Trigger: AAGGGCAGAAGTGGTACACCATCCCCAAAACGAACA...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTATACAGATGTTCGTTTTaGGGATGGTGTACCACTTCT +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLYRCSF*GWCTTS
Trigger: AGAAGTGGTACACCATCCCCAAAACGAACATCTGTA...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTTTACTGCTGGTGGCCTaGAGCCTACAGATGTTCGTT +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISLLLVA*SLQMFV
Trigger: AACGAACATCTGTAGGCTCCAGGCCACCAGCAGTAA...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTTGTTCTCACAGCACTTaGAACCTGCATCCCAGTACT +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLICSHST*NLHPST
Trigger: AGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACA...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATATCAGTTGACACTGCATaGGGCATGGACCAAGAGTAT +
Preference number: 4 (lower is better)
Translates to: MILHSRFLQMLRTRCLMISVDTA*GMDQEY
Trigger: ATACTCTTGGTCCATGCCCCATGCAGTGTCAACTGA...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGACCAGCTTACATTGAATaGGTACCACTAAGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRPAYIE*VPLRKD
Trigger: ATCTTTTCTTAGTGGTACCCATTCAATGTAAGCTGG...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTTACACTCTTTGCATGTaGCACTGGGCAGCCCTAACT +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISYTLCM*HWAALT
Trigger: AGTTAGGGCTGCCCAGTGCCACATGCAAAGAGTGTA...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGACTCTGAGAGTATGTTaGACGAATTTTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVTLRVC*TNFPEL
Trigger: GAGTTCAGGAAAATTCGTCCAACATACTCTCAGAGT...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGTGGAGCTTTGGGGACTaGCAAAAACTTCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAEWSFGD*QKLQSL
Trigger: CAAACTTTGAAGTTTTTGCCAGTCCCCAAAGCTCCA...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp GTAGAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACTGGATCTATCTCTaGAGCTTTGGGGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: VEYVILSIKEHLYLPEPKYWIYL*SFGDWQ
Trigger: TTGCCAGTCCCCAAAGCTCCAGAGATAGATCCAGTA...CTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTTCCCAGCACTGTGTATaGTTCTCCAGTAAAACGATC +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVISQHCV*FSSKTI
Trigger: GATCGTTTTACTGGAGAATCATACACAGTGCTGGGA...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCTCCCAGCACTGTGTATaGTTCTCCAGTAAAACGATC +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCSQHCV*FSSKTI
Trigger: GATCGTTTTACTGGAGAATCATACACAGTGCTGGGA...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTACCAGGTAGTACTGGCTaGGTAAATTTTGTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLPGSTG*VNFVLK
Trigger: CTTTAAGACAAAATTTACTCAGCCAGTACTACCTGG...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCACCACACCATACCATaGAACCAGGTAGTACTGGCT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKHHTIP*NQVVLA
Trigger: AGCCAGTACTACCTGGTTTCATGGTATGGTGTGGTG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATACCCTGTGAGGCAGGCTaGACAACTTACACTTATTTT +
Preference number: 4 (lower is better)
Translates to: MILHSRFLQMLRTRCLMIPCEAG*TTYTYF
Trigger: AAAATAAGTGTAAGTTGTTCAGCCTGCCTCACAGGG...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATAGCACTTTGCTGTTGCTaGAGCAATTTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: MILHSRFLQMLRTRCLMIALCCC*SNFTYS
Trigger: GGAGTATGTGAAATTGCTTCAGCAACAGCAAAGTGC...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCGCCACTATTCTACACTaGCACAACAATGCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCATILH*HNNAVQ
Trigger: TTGCACAGCATTGTTGTGTCAGTGTAGAATAGTGGC...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGCACGTTACTCCACTTTaGATACCCTATTTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVHVTPL*IPYFKV
Trigger: CACTTTAAAATAGGGTATTCAAAGTGGAGTAACGTG...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCTTGCCAGAGTTGAAATaGTCCTCTGTAGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATLPELK*SSVELL
Trigger: AAGAAGCTCTACAGAGGATCATTTCAACTCTGGCAA...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000484973.5
CDS-3UTR TCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTCTGTCTGGCAGCCTTTaGAAATTCTTCAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLILSGSL*KFFRFL
Trigger: AAGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAG...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAGAAAGGCGAAAGGCTaGAGCCATTGTGACTCTATC +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTERKAKG*SHCDSI
Trigger: GATAGAGTCACAATGGCTTCAGCCTTTCGCCTTTCT...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCTGTTACAGAGTTATCTaGCACCAAACACTCTACTGG +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKACYRVI*HQTLYW
Trigger: CCAGTAGAGTGTTTGGTGGCAGATAACTCTGTAACA...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGAAAAAACTTCAAAGTTTaGAGCATCTGTCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRKNFKV*SICLSC
Trigger: ACAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTT...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCTGTAGAGCTTCCTGCTaGAAGTTAATAGACTCTGGT +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKACRASC*KLIDSG
Trigger: ACCAGAGTCTATTAACTTGCAGCAGGAAGCTCTACA...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR GCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAGGGATGGTGTACCACTaGCCTTGTTCTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTEGMVYH*PCSLFL
Trigger: AAGGAAAAGAGAACAAGGGCAGTGGTACACCATCCC...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484973.5
CDS-3UTR CCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCCACCAAACACTCTACTaGATCTATCTCTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAHQTLY*IYLWSF
Trigger: AAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTG...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp TATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCTCAGCTGAGCTTATTATCTTCTTCTaGCATTCTCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: YPQYRVGVQYLTRMSSAELIIFF*HSPSHC
Trigger: ACAGTGGCTTGGAGAATGCCAGAAGAAGATAATAAG...CTCAGCTGAGCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCTCATCCTTTACACGTaGAAGTCCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLLILYT*KSIKIS
Trigger: ACTAATTTTGATGGACTTCCACGTGTAAAGGATGAG...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTACTTTCAGGTTCAAATaGGATGAGGAGTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLTFRFK*DEELSK
Trigger: TTTGGATAACTCCTCATCCCATTTGAACCTGAAAGT...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTTACTGCTGGTGGCCTaGAGCCTACAGATGTTCGTT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKLLLVA*SLQMFV
Trigger: AACGAACATCTGTAGGCTCCAGGCCACCAGCAGTAA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAGTAATGGTCACTCCTTaGAAGAAGGTTGGTTATCAT +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLVMVTP*KKVGYH
Trigger: ATGATAACCAACCTTCTTCCAAGGAGTGACCATTAC...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGAATGCTAACTCTGATGTaGCATATCCAACAATATCTT +
Preference number: 4 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRMLTLM*HIQQYL
Trigger: AAGATATTGTTGGATATGCCACATCAGAGTTAGCAT...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTGTGCAAATGCCTGCATaGAAATGTAGCTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLVQMPA*KCSLIH
Trigger: ATGAATTAAGCTACATTTCCATGCAGGCATTTGCAC...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGCTGCCCAGCCATTTaGTTGTTTGGAAAGAACTGT +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVISCPAI*LFGKNC
Trigger: ACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCT...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCTGGAGCTTTGGGGACTaGCAAAAACTTCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATWSFGD*QKLQSL
Trigger: CAAACTTTGAAGTTTTTGCCAGTCCCCAAAGCTCCA...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGAATCCTTCTGGGCCTTaGCCTCCCAATAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKNPSGP*PPNNVV
Trigger: GACAACATTATTGGGAGGTCAAGGCCCAGAAGGATT...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCAATCCTTCTGGGCCTTaGCCTCCCAATAATGTTGTC +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVINPSGP*PPNNVV
Trigger: GACAACATTATTGGGAGGTCAAGGCCCAGAAGGATT...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCCCAGGTAGTACTGGCTaGGTAAATTTTGTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAPGSTG*VNFVLK
Trigger: CTTTAAGACAAAATTTACTCAGCCAGTACTACCTGG...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCCTGAGTAGACACTATTaGGTAACAACATTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFLSRHY*VTTLFR
Trigger: CCTGAACAATGTTGTTACTCAATAGTGTCTACTCAG...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAACTACCAAATTCCTGTaGTTAGTAACTGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLTTKFL*LVTAQK
Trigger: TTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGT...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAATACTCCTCCAGCCCCTaGTTAATATATGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTEYSSSP*LIYAFP
Trigger: GGGAAATGCATATATTAATCAGGGGCTGGAGGAGTA...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCCAGGCCCATTACATGTaGCTATATAAAAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATQAHYM*LYKSEP
Trigger: TGGTTCACTTTTATATAGTCACATGTAATGGGCCTG...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCTGGACCAGCTTACATTaGATGGGTACCACTAAGAAA +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCWTSLH*MGTTKK
Trigger: TTTCTTAGTGGTACCCATTCAATGTAAGCTGGTCCA...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GTAGAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTGTTACAGAGTTATCTaGCACCAAACACTCTACTGG +
Preference number: 4 (lower is better)
Translates to: VEYVILSIKEHLYLPEPKCYRVI*HQTLYW
Trigger: CCAGTAGAGTGTTTGGTGGCAGATAACTCTGTAACA...CTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCCCCCAACGTTTTGTATaGTACTCCCACACTGTAGGA +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIPQRFV*YSHTVG
Trigger: TCCTACAGTGTGGGAGTAGCATACAAAACGTTGGGG...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCCCCAACGTTTTGTATaGTACTCCCACACTGTAGGA +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKPQRFV*YSHTVG
Trigger: TCCTACAGTGTGGGAGTAGCATACAAAACGTTGGGG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTTGCACAGTAGGTTCCTaGAAATGCTTCGTACTAGGT +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISCTVGS*KCFVLG
Trigger: ACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCA...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR GCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTATGTTAATTAAACACTaGCTTTTCCCCCATTTACTC +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLMLIKH*LFPHLL
Trigger: GAGTAAATGGGGGAAAAGGCAGTGTTTAATTAACAT...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR GCA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATACATGGACCAAGAGTATaGTTAGAGGAAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: MILHSRFLQMLRTRCLMIHGPRV*LEEKGT
Trigger: AGTGCCTTTTTCCTCTAAGCATACTCTTGGTCCATG...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCAGCTGCAAAACTCTATaGACAGTCCATCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATSCKTL*TVHQTS
Trigger: TGAAGTTTGATGGACTGTGCATAGAGTTTTGCAGCT...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCAGCTGCAAAACTCTATaGACAGTCCATCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFSCKTL*TVHQTS
Trigger: TGAAGTTTGATGGACTGTGCATAGAGTTTTGCAGCT...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCCATTCACGTGCCTTCTaGTCTACATACTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCHSRAF*STYCEI
Trigger: GATTTCACAGTATGTAGAGCAGAAGGCACGTGAATG...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGACACAACAATGCTGTaGAAGAGCTTTTACAGCTCT +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTDTTML*KSFYSS
Trigger: AGAGCTGTAAAAGCTCTTGCACAGCATTGTTGTGTC...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGTTACGAGCTTGTTCCTaGTTGATACAGTTAATCATA +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVLRACS*LIQLII
Trigger: TATGATTAACTGTATCAAGCAGGAACAAGCTCGTAA...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp TACAGTGCTCATGTGCATAAAGTGATGATGCTTTCCCAAGCAGCTCATAGACAGATAAGTCCACCTATGTaGATTAGTAAGCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: YSAHVHKVMMLSQAAHRQISPPM*ISKLLY
Trigger: GTAAAGAAGCTTACTAATGCACATAGGTGGACTTAT...CTGTCTATGAGCTGCTTGGGAAAGCATCATCACTTTATGCACATGAGCACTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTCTATCTCTGGAGCTTTaGGGATTAAGGAATACAGCA +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVILSLEL*GLRNTA
Trigger: TGCTGTATTCCTTAATCCCCAAAGCTCCAGAGATAG...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374707.1
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCCTTATTATCTTCTTCTaGCATTCTCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATLIIFF*HSPSHC
Trigger: ACAGTGGCTTGGAGAATGCCAGAAGAAGATAATAAG...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAACTTTCAGGTTCAAATaGGATGAGGAGTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLTFRFK*DEELSK
Trigger: TTTGGATAACTCCTCATCCCATTTGAACCTGAAAGT...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCAGCCAGTTGTTGACATaGATACACCAACTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATSQLLT*IHQLVF
Trigger: AAACACTAGTTGGTGTATCCATGTCAACAACTGGCT...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTGTTCTCACAGCACTTaGAACCTGCATCCCAGTACT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKCSHST*NLHPST
Trigger: AGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGAGTGTCACATTCAAGTaGGAATTTTACCAAACACAA +
Preference number: 4 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVSVTFK*EFYQTQ
Trigger: TTGTGTTTGGTAAAATTCCCACTTGAATGTGACACT...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGACACTGCATGGGGCATaGACCAAGAGTATGCTTAGA +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKTLHGA*TKSMLR
Trigger: TCTAAGCATACTCTTGGTCCATGCCCCATGCAGTGT...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAAAAGACATAATGACATaGTCAGCCATGAGAGTCAAA +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLKDIMT*SAMRVK
Trigger: TTTGACTCTCATGGCTGACCATGTCATTATGTCTTT...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTATGCTAACTCTGATGTaGCATATCCAACAATATCTT +
Preference number: 4 (lower is better)
Translates to: AWYLLASMILHSRFLQMLMLTLM*HIQQYL
Trigger: AAGATATTGTTGGATATGCCACATCAGAGTTAGCAT...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGTTGTCACTGACCTTTaGTTTCAAAGAAAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATVVTDL*FQRKAK
Trigger: TTTCGCCTTTCTTTGAAACCAAAGGTCAGTGACAAC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTTGGAGCTTTGGGGACTaGCAAAAACTTCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIWSFGD*QKLQSL
Trigger: CAAACTTTGAAGTTTTTGCCAGTCCCCAAAGCTCCA...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCTACTGGATCTATCTCTaGAGCTTTGGGGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIYWIYL*SFGDWQ
Trigger: TTGCCAGTCCCCAAAGCTCCAGAGATAGATCCAGTA...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTACAGATGTTCGTTTTaGGGATGGTGTACCACTGCC +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKYRCSF*GWCTTA
Trigger: GGCAGTGGTACACCATCCCCAAAACGAACATCTGTA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484973.5
CDS-3UTR TCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCCAGGTTCAAATGGGATaGGGAGTTATCCAAATTGAA +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCQVQMG*GVIQIE
Trigger: TTCAATTTGGATAACTCCTCATCCCATTTGAACCTG...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCATTTGCATCATAGAATaGAAGTTGACCCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAICIIE*KLTPIK
Trigger: TTTGATGGGGGTCAACTTTCATTCTATGATGCAAAT...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCATTTGCATCATAGAATaGAAGTTGACCCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATICIIE*KLTPIK
Trigger: TTTGATGGGGGTCAACTTTCATTCTATGATGCAAAT...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACACCAGGTAGTACTGGCTaGGTAAATTTTGTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTPGSTG*VNFVLK
Trigger: CTTTAAGACAAAATTTACTCAGCCAGTACTACCTGG...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTCCAGGTAGTACTGGCTaGGTAAATTTTGTCTTAAAG +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIPGSTG*VNFVLK
Trigger: CTTTAAGACAAAATTTACTCAGCCAGTACTACCTGG...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTCCATTTTCACTTTTCTaGAGTGTTCTCACAGCACTT +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIPFSLF*SVLTAL
Trigger: AAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGG...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCACTACCAAATTCCTGTaGTTAGTAACTGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATTTKFL*LVTAQK
Trigger: TTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGT...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGATCTGCTTGCTTCTATaGTACTGCACAGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKICLLL*YCTVGS
Trigger: GGAACCTACTGTGCAGTATCATAGAAGCAAGCAGAT...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTATCTGCTTGCTTCTATaGTACTGCACAGTAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SRVIGLRKYKKATSHAQIICLLL*YCTVGS
Trigger: GGAACCTACTGTGCAGTATCATAGAAGCAAGCAGAT...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTGAGAAAACAAACCTCTaGATGAATGGCTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLIEKTNL*MNGCLK
Trigger: TTTCAAGCAGCCATTCATTCAGAGGTTTGTTTTCTC...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCGTATGGATTAGCCAATaGATGGAGACTCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFVWISQ*METHLL
Trigger: TAAAAGATGAGTCTCCATTCATTGGCTAATCCATAC...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCCACGTTACTCCACTTTaGATACCCTATTTTAAAGTG +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFHVTPL*IPYFKV
Trigger: CACTTTAAAATAGGGTATTCAAAGTGGAGTAACGTG...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCTGTCTGGCAGCCTTTaGAAATTCTTCAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKLSGSL*KFFRFL
Trigger: AAGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTCATTCACGTGCCTTCTaGTCTACATACTGTGAAATC +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISHSRAF*STYCEI
Trigger: GATTTCACAGTATGTAGAGCAGAAGGCACGTGAATG...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTATTACGAGCTTGTTCCTaGTTGATACAGTTAATCATA +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLLRACS*LIQLII
Trigger: TATGATTAACTGTATCAAGCAGGAACAAGCTCGTAA...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAACACCAAACACTCTACTaGATCTATCTCTGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTEHQTLY*IYLWSF
Trigger: AAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTG...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTCTTATTATCTTCTTCTaGCATTCTCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVILIIFF*HSPSHC
Trigger: ACAGTGGCTTGGAGAATGCCAGAAGAAGATAATAAG...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCCTTATTATCTTCTTCTaGCATTCTCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCLIIFF*HSPSHC
Trigger: ACAGTGGCTTGGAGAATGCCAGAAGAAGATAATAAG...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTTACAGATGTTCGTTTTaGGGATGGTGTACCACTTCT +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISYRCSF*GWCTTS
Trigger: AGAAGTGGTACACCATCCCCAAAACGAACATCTGTA...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTAGCCAGTTGTTGACATaGATACACCAACTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLISQLLT*IHQLVF
Trigger: AAACACTAGTTGGTGTATCCATGTCAACAACTGGCT...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAAGTGTCACATTCAAGTaGGAATTTTACCAAACACAA +
Preference number: 4 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLSVTFK*EFYQTQ
Trigger: TTGTGTTTGGTAAAATTCCCACTTGAATGTGACACT...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGTGCAAATGCCTGCATaGAAATGTAGCTTAATTCAT +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATVQMPA*KCSLIH
Trigger: ATGAATTAAGCTACATTTCCATGCAGGCATTTGCAC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCAGCCATTTGGTTGTTTaGAAAGAACTGTTTAGACCA +
Preference number: 4 (lower is better)
Translates to: PDFHYYQIPVISNCTEKASHLVV*KELFRP
Trigger: TGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCT...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTAGCTGCCCAGCCATTTaGTTGTTTGGAAAGAACTGT +
Preference number: 4 (lower is better)
Translates to: SRVIGLRKYKKATSHAQISCPAI*LFGKNC
Trigger: ACAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCT...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAACTCTGAGAGTATGTTaGACGAATTTTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTTLRVC*TNFPEL
Trigger: GAGTTCAGGAAAATTCGTCCAACATACTCTCAGAGT...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GTAGAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGACTCTGAGAGTATGTTaGACGAATTTTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: VEYVILSIKEHLYLPEPKTLRVC*TNFPEL
Trigger: GAGTTCAGGAAAATTCGTCCAACATACTCTCAGAGT...CTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATAGTTGTCACTGACCTTTaGTTTCAAAGAAAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: MILHSRFLQMLRTRCLMIVVTDL*FQRKAK
Trigger: TTTCGCCTTTCTTTGAAACCAAAGGTCAGTGACAAC...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACGTTGTCACTGACCTTTaGTTTCAAAGAAAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYVVTDL*FQRKAK
Trigger: TTTCGCCTTTCTTTGAAACCAAAGGTCAGTGACAAC...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTTGGAGCTTTGGGGACTaGCAAAAACTTCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISWSFGD*QKLQSL
Trigger: CAAACTTTGAAGTTTTTGCCAGTCCCCAAAGCTCCA...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTTGTTCGTTTTGGGGATaGTGTACCACTTCTTGTATG +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISCSFWG*CTTSCM
Trigger: CATACAAGAAGTGGTACACCATCCCCAAAACGAACA...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394926.7
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTATTTGCATCATAGAATaGAAGTTGACCCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIICIIE*KLTPIK
Trigger: TTTGATGGGGGTCAACTTTCATTCTATGATGCAAAT...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAACTGAGTAGACACTATTaGGTAACAACATTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTELSRHY*VTTLFR
Trigger: CCTGAACAATGTTGTTACTCAATAGTGTCTACTCAG...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAACTACCAAATTCCTGTaGTTAGTAACTGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTTTKFL*LVTAQK
Trigger: TTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGT...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACTACCAAATTCCTGTaGTTAGTAACTGCACAGAAA +
Preference number: 4 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCTTKFL*LVTAQK
Trigger: TTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGT...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTAGAACACAGCAAACCTaGTTTTCACTACTACCAAAT +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLIRTQQT*FSLLPN
Trigger: ATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCT...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR TCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTGTATGGATTAGCCAATaGATGGAGACTCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIVWISQ*METHLL
Trigger: TAAAAGATGAGTCTCCATTCATTGGCTAATCCATAC...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCTGGACCAGCTTACATTaGATGGGTACCACTAAGAAA +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIWTSLH*MGTTKK
Trigger: TTTCTTAGTGGTACCCATTCAATGTAAGCTGGTCCA...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTGTTAGAAATCACTGGTaGTACCACTTTAAGCACACG +
Preference number: 4 (lower is better)
Translates to: SRVIGLRKYKKATSHAQIVRNHW*YHFKHT
Trigger: CGTGTGCTTAAAGTGGTATCACCAGTGATTTCTAAC...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTTGCCAGAGTTGAAATaGTCCTCTGTAGAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKLPELK*SSVELL
Trigger: AAGAAGCTCTACAGAGGATCATTTCAACTCTGGCAA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000484973.5
CDS-3UTR GCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCCATGGACCAAGAGTATaGTTAGAGGAAAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIHGPRV*LEEKGT
Trigger: AGTGCCTTTTTCCTCTAAGCATACTCTTGGTCCATG...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR GCA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCAAAAACTTCAAAGTTTaGAGCATCTGTCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: DFHYYQIPVISNCTEKATKNFKV*SICLSC
Trigger: ACAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTT...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTCTTATTATCTTCTTCTaGCATTCTCCAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISLIIFF*HSPSHC
Trigger: ACAGTGGCTTGGAGAATGCCAGAAGAAGATAATAAG...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACCTCATCCTTTACACGTaGAAGTCCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYLILYT*KSIKIS
Trigger: ACTAATTTTGATGGACTTCCACGTGTAAAGGATGAG...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTACAGATGTTCGTTTTaGGGATGGTGTACCACTTCT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKYRCSF*GWCTTS
Trigger: AGAAGTGGTACACCATCCCCAAAACGAACATCTGTA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CCA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCTTAGACTCAGTGCTTTaGTACCTTAGATATATAGGA +
Preference number: 4 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFLDSVL*YLRYIG
Trigger: TCCTATATATCTAAGGTACCAAAGCACTGAGTCTAA...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATAAGCCATTTGGTTGTTTaGAAAGAACTGTTTAGACCA +
Preference number: 4 (lower is better)
Translates to: MILHSRFLQMLRTRCLMISHLVV*KELFRP
Trigger: TGGTCTAAACAGTTCTTTCCAAACAACCAAATGGCT...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAACTCTGAGAGTATGTTaGACGAATTTTCCTGAACTC +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTETLRVC*TNFPEL
Trigger: GAGTTCAGGAAAATTCGTCCAACATACTCTCAGAGT...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTTCAGTGAAGTAACATaGACACTGCCCTTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKFSEVT*TLPLFS
Trigger: AGAGAACAAGGGCAGTGTCCATGTTACTTCACTGAA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394926.7
CDS-3UTR CCA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCCAAGTTAATAGACTCTaGTCCAATAGTGATGTTAGA +
Preference number: 4 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSQVNRL*SNSDVR
Trigger: TCTAACATCACTATTGGACCAGAGTCTATTAACTTG...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR TCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCCCATTTTCACTTTTCTaGAGTGTTCTCACAGCACTT +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIPFSLF*SVLTAL
Trigger: AAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGG...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCCATTTTCACTTTTCTaGAGTGTTCTCACAGCACTT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKPFSLF*SVLTAL
Trigger: AAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCTGAGTAGACACTATTaGGTAACAACATTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKLSRHY*VTTLFR
Trigger: CCTGAACAATGTTGTTACTCAATAGTGTCTACTCAG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAATGTTAATTAAACACTaGCTTTTCCCCCATTTACTC +
Preference number: 4 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTMLIKH*LFPHLL
Trigger: GAGTAAATGGGGGAAAAGGCAGTGTTTAATTAACAT...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR GCA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTTTACGAGCTTGTTCCTaGTTGATACAGTTAATCATA +
Preference number: 4 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVILRACS*LIQLII
Trigger: TATGATTAACTGTATCAAGCAGGAACAAGCTCGTAA...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR GCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTAAAAACTTCAAAGTTTaGAGCATCTGTCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLIKNFKV*SICLSC
Trigger: ACAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTT...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR GCA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACAAAAACTTCAAAGTTTaGAGCATCTGTCTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYKNFKV*SICLSC
Trigger: ACAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTT...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR GCA 90 bp TTTGGAATAAATGAACAGCCAGCATTTTACTTATCAAGAAACCCCAAGGCTTTAACCTTTCTAACACAATaGAGCTCACTACATACTCCA +
Preference number: 4 (lower is better)
Translates to: FGINEQPAFYLSRNPKALTFLTQ*SSLHTP
Trigger: TGGAGTATGTAGTGAGCTGCATTGTGTTAGAAAGGT...TAAAGCCTTGGGGTTTCTTGATAAGTAAAATGCTGGCTGTTCATTTATTCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CCA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTACTTTCAGGTTCAAATaGGATGAGGAGTTATCCAAA +
Preference number: 4 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISTFRFK*DEELSK
Trigger: TTTGGATAACTCCTCATCCCATTTGAACCTGAAAGT...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTTTAGACTCAGTGCTTTaGTACCTTAGATATATAGGA +
Preference number: 4 (lower is better)
Translates to: VFNDKRFQASKQNTANLILDSVL*YLRYIG
Trigger: TCCTATATATCTAAGGTACCAAAGCACTGAGTCTAA...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGTTGTCACTGACCTTTaGTTTCAAAGAAAGGCGAAA +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKVVTDL*FQRKAK
Trigger: TTTCGCCTTTCTTTGAAACCAAAGGTCAGTGACAAC...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp TTTGGAATAAATGAACAGCCAGCATTTTACTTATCAAGAAACCCCAAGGCTTTAATGAGCCACCATACCTaGCCAACATATCATACTTTT +
Preference number: 4 (lower is better)
Translates to: FGINEQPAFYLSRNPKALMSHHT*PTYHTF
Trigger: AAAAGTATGATATGTTGGCCAGGTATGGTGGCTCAT...TAAAGCCTTGGGGTTTCTTGATAAGTAAAATGCTGGCTGTTCATTTATTCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR TCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCATTTGCATCATAGAATaGAAGTTGACCCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIICIIE*KLTPIK
Trigger: TTTGATGGGGGTCAACTTTCATTCTATGATGCAAAT...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGAGAACACAGCAAACCTaGTTTTCACTACTACCAAAT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKRTQQT*FSLLPN
Trigger: ATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCT...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR TCA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTACTATTGTATGGCACTaGGTGCATCATAAGTATCAT +
Preference number: 4 (lower is better)
Translates to: SRVIGLRKYKKATSHAQITIVWH*VHHKYH
Trigger: ATGATACTTATGATGCACTCAGTGCCATACAATAGT...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR TCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGACTATTGTATGGCACTaGGTGCATCATAAGTATCAT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKTIVWH*VHHKYH
Trigger: ATGATACTTATGATGCACTCAGTGCCATACAATAGT...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCCTCATCCTTTACACGTaGAAGTCCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVILILYT*KSIKIS
Trigger: ACTAATTTTGATGGACTTCCACGTGTAAAGGATGAG...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCTCATCCTTTACACGTaGAAGTCCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKLILYT*KSIKIS
Trigger: ACTAATTTTGATGGACTTCCACGTGTAAAGGATGAG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CCA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAGTTTTACCCCAAGTTTaGGAAAGATATCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: SKPDFHYYQIPVISNCTEVLPQV*ERYLCQ
Trigger: TTGACATAGATATCTTTCCCAAACTTGGGGTAAAAC...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCCAGCTTACATTGAATaGGTACCACTAAGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKPAYIE*VPLRKD
Trigger: ATCTTTTCTTAGTGGTACCCATTCAATGTAAGCTGG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
3UTR CAA 72 bp TTAGCTAAAAACAACACTTTACATTTACGTAGCACTTaGCTGTTGCTGAAGCAATTTCACATACTCCATTTC +
Preference number: 4 (lower is better)
Translates to: LAKNNTLHLRST*LLLKQFHILHF
Trigger: GAAATGGAGTATGTGAAATTGCTTCAGCAACAGCAAAGTGCTACGTAAATGTAAAGTGTTGTTTTTAGCTAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCATGTGATGAGAATTTaGACTGGATTTACTGAACTT +
Preference number: 4 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKHVMRI*TGFTEL
Trigger: AAGTTCAGTAAATCCAGTCCAAATTCTCATCACATG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CCA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCCAAGTTAATAGACTCTaGTCCAATAGTGATGTTAGA +
Preference number: 4 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIQVNRL*SNSDVR
Trigger: TCTAACATCACTATTGGACCAGAGTCTATTAACTTG...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS TCA 90 bp GCCGCGGTTGCCAGGGTGAAAGGGCGGCCCGCAGAAGGGAGGGGCTaGGGAGCGCACCGCGCCTGCGCGCAGCGGCTGACTGCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: AAVARVKGRPAEGRG*GAHRACAQRLTAPG
Trigger: CCCGGGAGCAGTCAGCCGCTGCGCGCAGGCGCGGTGCGCTCCTCAGCCCCTCCCTTCTGCGGGCCGCCCTTTCACCCTGGCAACCGCGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS TCA 90 bp GAGTGGCTAAGCCCACTGGGCTCGAACCCGAGACGACGAACCGTGTaGGGAGGCTCAGCGAGATCGCACACCCCAAGACCGCTACTCACT +
Preference number: 5 (lower is better)
Translates to: EWLSPLGSNPRRRTV*GGSARSHTPRPLLT
Trigger: AGTGAGTAGCGGTCTTGGGGTGTGCGATCTCGCTGAGCCTCCTCACACGGTTCGTCGTCTCGGGTTCGAGCCCAGTGGGCTTAGCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394926.7
ENST00000469022.5
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS-3UTR CAA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCAGCAAACCACCCACCTaGGCTTCCCATAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLSKPPT*ASHSAG
Trigger: CCCAGCACTATGGGAAGCCAAGGTGGGTGGTTTGCT...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CAA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATCTCCAGCCACAGCCTaGTTACAAGCTCGCACTCTG +
Preference number: 5 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRSPATA*LQARTL
Trigger: CAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTGACCTCCCAATAATGTaGTCCACTTTCAATAGCAGT +
Preference number: 5 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCDLPIM*STFNSS
Trigger: ACTGCTATTGAAAGTGGACAACATTATTGGGAGGTC...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTTTGGGATTTACGAGCTaGTTCCTGCTTGATACAGTT +
Preference number: 5 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCLGFTS*FLLDTV
Trigger: AACTGTATCAAGCAGGAACAAGCTCGTAAATCCCAA...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR CAA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCTCTATCTCTGGAGCTTaGGGGACTGGCAAAAACTTC +
Preference number: 5 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSSISGA*GTGKNF
Trigger: GAAGTTTTTGCCAGTCCCCAAAGCTCCAGAGATAGA...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR CAA 90 bp CATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCTCTGTTTTTGTAGCCAGTTGTaGACATGGATACACCAACTA +
Preference number: 5 (lower is better)
Translates to: HFPMPLQQRALTTTTMLCFCSQL*TWIHQL
Trigger: TAGTTGGTGTATCCATGTCAACAACTGGCTACAAAA...ACAGAGCATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGAGTGTTCTCACAGCACTaGGAACCTGCATCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRVFSQH*EPASQY
Trigger: GTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACAC...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGAGACCAAATACACTCTTaGCATGTGGCACTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRDQIHS*HVALGS
Trigger: GCTGCCCAGTGCCACATGCAAAGAGTGTATTTGGTC...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp GCTAGAGTGCAGCAGTGTAATCACAGCTCGGTGCAGCCTCAACTTCCTAGGCTCCGAGCTTGTTCCTGCTaGATACAGTTAATCATACTT +
Preference number: 5 (lower is better)
Translates to: ARVQQCNHSSVQPQLPRLRACSC*IQLIIL
Trigger: AAGTATGATTAACTGTATCAAGCAGGAACAAGCTCG...GAGCCTAGGAAGTTGAGGCTGCACCGAGCTGTGATTACACTGCTGCACTCTAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CAA 90 bp CTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGAAACATGTCTGTCTGGCAGCCTTaGAAAATTCTTCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LIVCLPNWWSECLLRGNMSVWQP*KILQVP
Trigger: AGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAGA...CATGTTTCCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CAA 90 bp GTGGCACTGGGCAGCCCTAACTTCAAAGTGCAAATGCCTGCATGGAAATGTAGCATTGTGACTCTATCCTaGATCTGTCTGGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: VALGSPNFKVQMPAWKCSIVTLS*ICLAAF
Trigger: AAAGGCTGCCAGACAGATCAAGGATAGAGTCACAAT...GCTACATTTCCATGCAGGCATTTGCACTTTGAAGTTAGGGCTGCCCAGTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR CAA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGTCTATCTCTGGAGCTTaGGGGACTGGCAAAAACTTC +
Preference number: 5 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERSISGA*GTGKNF
Trigger: GAAGTTTTTGCCAGTCCCCAAAGCTCCAGAGATAGA...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CAA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGAAATACACTGATAGTTaGCCTCCCCAACTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERKYTDS*PPQLVV
Trigger: GACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CAA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGTGCCCAGCCATTTGGTaGTTTGGAAAGAACTGTTTA +
Preference number: 5 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMCPAIW*FGKNCL
Trigger: TAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCA...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCTCTCCAGCCACAGCCTaGTTACAAGCTCGCACTCTG +
Preference number: 5 (lower is better)
Translates to: DFHYYQIPVISNCTEKATSPATA*LQARTL
Trigger: CAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGA...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp AAATACACTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGTTGAAGTTAAGTGCTTaGGTCTCTAGAGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: KYTDSLPPQLVVRVSAERLKLSA*VSRVTG
Trigger: TCCAGTGACTCTAGAGACCAAAGCACTTAACTTCAA...CCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAGTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CAA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGGAGGAGTTATCCAAATaGAAGTTAAGTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMEELSK*KLSALV
Trigger: GACCAAAGCACTTAACTTCAATTTGGATAACTCCTC...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAGACCAAATACACTCTTaGCATGTGGCACTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLDQIHS*HVALGS
Trigger: GCTGCCCAGTGCCACATGCAAAGAGTGTATTTGGTC...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp TATATGCATTTCCCCATGCCCCTGCAACAGAGGGCCCTCACCACTACAACAATGCGAGCTTGTTCCTGCTaGATACAGTTAATCATACTT +
Preference number: 5 (lower is better)
Translates to: YMHFPMPLQQRALTTTTMRACSC*IQLIIL
Trigger: AAGTATGATTAACTGTATCAAGCAGGAACAAGCTCG...CATTGTTGTAGTGGTGAGGGCCCTCTGTTGCAGGGGCATGGGGAAATGCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR CAA 90 bp CTGATAGTTTGCCTCCCCAACTGGTGGTCAGAGTGTCTGCTGAGAGGAAACATGCAAAAACTTCAAAGTTaGCAGCATCTGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LIVCLPNWWSECLLRGNMQKLQS*QHLSFL
Trigger: CAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTTG...CATGTTTCCTCTCAGCAGACACTCTGACCACCAGTTGGGGAGGCAAACTATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS CCA 90 bp AGTTATCTGCCACCAAACACTCTACTGGATCTATCTCTGGAGCTTTaGGGATTAAGGAATACAGCAGAATGTCTGAGAGTCCAGCTCCAA +
Preference number: 5 (lower is better)
Translates to: SYLPPNTLLDLSLEL*GLRNTAECLRVQLQ
Trigger: TTGGAGCTGGACTCTCAGACATTCTGCTGTATTCCTTAATCCCCAAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTGGCAGATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374707.1
CDS-3UTR CAA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACATCTCCAGCCACAGCCTaGTTACAAGCTCGCACTCTG +
Preference number: 5 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTSPATA*LQARTL
Trigger: CAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGA...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTTCTCCAGCCACAGCCTaGTTACAAGCTCGCACTCTG +
Preference number: 5 (lower is better)
Translates to: VFNDKRFQASKQNTANLISPATA*LQARTL
Trigger: CAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGA...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCGTGTTCTCACAGCACTaGGAACCTGCATCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAVFSQH*EPASQY
Trigger: GTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACAC...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGTCTATCTCTGGAGCTTaGGGGACTGGCAAAAACTTC +
Preference number: 5 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVSISGA*GTGKNF
Trigger: GAAGTTTTTGCCAGTCCCCAAAGCTCCAGAGATAGA...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS TCA 90 bp TTGTTCAGGCTGCTAGCTGAACCAGTCATTCCATTTTCACTTTTCTaGAGTGTTCTCACAGCACTTGGAACCTGCATCCCAGTACTCAAA +
Preference number: 5 (lower is better)
Translates to: LFRLLAEPVIPFSLF*SVLTALGTCIPVLK
Trigger: TTTGAGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGGAATGACTGGTTCAGCTAGCAGCCTGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CCA 90 bp ACCAGTCATTCCATTTTCACTTTTCTGAAGTGTTCTCACAGCACTTaGAACCTGCATCCCAGTACTCAAAGAAAGTCCACCACACCATAC +
Preference number: 5 (lower is better)
Translates to: TSHSIFTFLKCSHST*NLHPSTQRKSTTPY
Trigger: GTATGGTGTGGTGGACTTTCTTTGAGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGGAATGACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCGTGTTCTCACAGCACTaGGAACCTGCATCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCVFSQH*EPASQY
Trigger: GTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACAC...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTGTGTTCTCACAGCACTaGGAACCTGCATCCCAGTAC +
Preference number: 5 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIVFSQH*EPASQY
Trigger: GTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACAC...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGTCTGTCTGGCAGCCTTaGAAAATTCTTCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVSVWQP*KILQVP
Trigger: AGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAGA...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS TCA 90 bp CACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGACACTATTaGGTAACAACATTGTTCAGGCTGCTAGCTGAACCAGTCATTCCA +
Preference number: 5 (lower is better)
Translates to: HLIKTEGKRILSRHY*VTTLFRLLAEPVIP
Trigger: TGGAATGACTGGTTCAGCTAGCAGCCTGAACAATGTTGTTACTCAATAGTGTCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS GCA 90 bp AGTGTTTGTCTTTCCCAATTGGTCAAATTTCCCCAACGTTTTGTATaGTACTCCCACACTGTAGGATTTACAATCCTTCTGGGCCTTGAC +
Preference number: 5 (lower is better)
Translates to: SVCLSQLVKFPQRFV*YSHTVGFTILLGLD
Trigger: GTCAAGGCCCAGAAGGATTGTAAATCCTACAGTGTGGGAGTAGCATACAAAACGTTGGGGAAATTTGACCAATTGGGAAAGACAAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGTTGAAGTTAAGTGCTTaGGTCTCTAGAGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVLKLSA*VSRVTG
Trigger: TCCAGTGACTCTAGAGACCAAAGCACTTAACTTCAA...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTGACCTCCCAATAATGTaGTCCACTTTCAATAGCAGT +
Preference number: 5 (lower is better)
Translates to: AWYLLASMILHSRFLQMLDLPIM*STFNSS
Trigger: ACTGCTATTGAAAGTGGACAACATTATTGGGAGGTC...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGGTTTGTCTTTCCCAATaGGTCAAATTTCCCCAACGT +
Preference number: 5 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVVCLSQ*VKFPQR
Trigger: ACGTTGGGGAAATTTGACCAATTGGGAAAGACAAAC...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CTGCACAGAAAAGGCCACCTAATCAAGACGGAGGGTAAACGTATTCTGAGTAGATTTTGTAGCCAGTTGTaGACATGGATACACCAACTA +
Preference number: 5 (lower is better)
Translates to: LHRKGHLIKTEGKRILSRFCSQL*TWIHQL
Trigger: TAGTTGGTGTATCCATGTCAACAACTGGCTACAAAA...TCTACTCAGAATACGTTTACCCTCCGTCTTGATTAGGTGGCCTTTTCTGTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTGTGTTTTGTAGCCAGTaGTTGACATGGATACACCAA +
Preference number: 5 (lower is better)
Translates to: AWYLLASMILHSRFLQMLVFCSQ*LTWIHQ
Trigger: TTGGTGTATCCATGTCAACAACTGGCTACAAAACAC...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCAAGCTGCCCAGCCATTaGGTTGTTTGGAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: DFHYYQIPVISNCTEKATKLPSH*VVWKEL
Trigger: CAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTT...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCCTACAGATGTTCGTTTaGGGGATGGTGTACCACTGC +
Preference number: 5 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCLQMFV*GMVYHC
Trigger: GCAGTGGTACACCATCCCCAAAACGAACATCTGTAG...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484973.5
CDS-3UTR CAA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTATTGAAGTTAAGTGCTTaGGTCTCTAGAGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLLKLSA*VSRVTG
Trigger: TCCAGTGACTCTAGAGACCAAAGCACTTAACTTCAA...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCCTACAGATGTTCGTTTaGGGGATGGTGTACCACTTC +
Preference number: 5 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCLQMFV*GMVYHF
Trigger: GAAGTGGTACACCATCCCCAAAACGAACATCTGTAG...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp TTCTGCTCTACATACTGTGAAATCCTCTTCATGTCCATTCCCATGGACCAGCTTTTTTGTAGCCAGTTGTaGACATGGATACACCAACTA +
Preference number: 5 (lower is better)
Translates to: FCSTYCEILFMSIPMDQLFCSQL*TWIHQL
Trigger: TAGTTGGTGTATCCATGTCAACAACTGGCTACAAAA...AAGCTGGTCCATGGGAATGGACATGAAGAGGATTTCACAGTATGTAGAGCAGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAAGCTGCCCAGCCATTaGGTTGTTTGGAAAGAACTG +
Preference number: 5 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIKLPSH*VVWKEL
Trigger: CAGTTCTTTCCAAACAACCAAATGGCTGGGCAGCTT...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGCGAGCTTGTTCCTGCTaGATACAGTTAATCATACTT +
Preference number: 5 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVRACSC*IQLIIL
Trigger: AAGTATGATTAACTGTATCAAGCAGGAACAAGCTCG...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GCTTGGTATCTGCTTGCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCAAAAACTTCAAAGTTaGCAGCATCTGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: AWYLLASMILHSRFLQMLQKLQS*QHLSFL
Trigger: CAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTTG...AAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGCAAGCAGATACCAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTTCTATCTCTGGAGCTTaGGGGACTGGCAAAAACTTC +
Preference number: 5 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVISISGA*GTGKNF
Trigger: GAAGTTTTTGCCAGTCCCCAAAGCTCCAGAGATAGA...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GCTTCTATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAGAGGAGTTATCCAAATaGAAGTTAAGTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: ASMILHSRFLQMLRTRCLEELSK*KLSALV
Trigger: GACCAAAGCACTTAACTTCAATTTGGATAACTCCTC...TAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCATAGAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTCTACAGATGTTCGTTTaGGGGATGGTGTACCACTTC +
Preference number: 5 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISLQMFV*GMVYHF
Trigger: GAAGTGGTACACCATCCCCAAAACGAACATCTGTAG...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAACTACAGATGTTCGTTTaGGGGATGGTGTACCACTTC +
Preference number: 5 (lower is better)
Translates to: SKPDFHYYQIPVISNCTELQMFV*GMVYHF
Trigger: GAAGTGGTACACCATCCCCAAAACGAACATCTGTAG...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGACCTCCCAATAATGTaGTCCACTTTCAATAGCAGT +
Preference number: 5 (lower is better)
Translates to: DFHYYQIPVISNCTEKATDLPIM*STFNSS
Trigger: ACTGCTATTGAAAGTGGACAACATTATTGGGAGGTC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCGTGTTTTGTAGCCAGTaGTTGACATGGATACACCAA +
Preference number: 5 (lower is better)
Translates to: DFHYYQIPVISNCTEKATVFCSQ*LTWIHQ
Trigger: TTGGTGTATCCATGTCAACAACTGGCTACAAAACAC...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GGCCTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGTCAATCATCAGTTTTTaGCTTGGTATCTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GLKAEHSKPDFHYYQIPVSIISF*LGICLL
Trigger: AAGCAAGCAGATACCAAGCAAAAAACTGATGATTGA...CACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCTTGGGATTTACGAGCTaGTTCCTGCTTGATACAGTT +
Preference number: 5 (lower is better)
Translates to: PDFHYYQIPVISNCTEKALGFTS*FLLDTV
Trigger: AACTGTATCAAGCAGGAACAAGCTCGTAAATCCCAA...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp ATGATACTGCACAGTAGGTTCCTGCAAATGCTTCGTACTAGGTGTTTAATGATAATTGTGACTCTATCCTaGATCTGTCTGGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: MILHSRFLQMLRTRCLMIIVTLS*ICLAAF
Trigger: AAAGGCTGCCAGACAGATCAAGGATAGAGTCACAAT...TATCATTAAACACCTAGTACGAAGCATTTGCAGGAACCTACTGTGCAGTATCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACATTGTGACTCTATCCTaGATCTGTCTGGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYIVTLS*ICLAAF
Trigger: AAAGGCTGCCAGACAGATCAAGGATAGAGTCACAAT...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS CCA 90 bp GTAGGATCCCACTCTACACATGTATCTTCAACTTTCAGGTTCAAATaGGATGAGGAGTTATCCAAATTGAAGTTAAGTGCTTTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: VGSHSTHVSSTFRFK*DEELSKLKLSALVS
Trigger: AGAGACCAAAGCACTTAACTTCAATTTGGATAACTCCTCATCCCATTTGAACCTGAAAGTTGAAGATACATGTGTAGAGTGGGATCCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS-3UTR CAA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTTTGAAGTTAAGTGCTTaGGTCTCTAGAGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVILKLSA*VSRVTG
Trigger: TCCAGTGACTCTAGAGACCAAAGCACTTAACTTCAA...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTTTGAAGTTAAGTGCTTaGGTCTCTAGAGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: VFNDKRFQASKQNTANLILKLSA*VSRVTG
Trigger: TCCAGTGACTCTAGAGACCAAAGCACTTAACTTCAA...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCGAGGAGTTATCCAAATaGAAGTTAAGTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: PDFHYYQIPVISNCTEKAEELSK*KLSALV
Trigger: GACCAAAGCACTTAACTTCAATTTGGATAACTCCTC...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp TCATCTCTGTATCCTCAGTACAGAGTAGGTGTACAATATCTGACTAGAATGAGCGAGGAGTTATCCAAATaGAAGTTAAGTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: SSLYPQYRVGVQYLTRMSEELSK*KLSALV
Trigger: GACCAAAGCACTTAACTTCAATTTGGATAACTCCTC...GCTCATTCTAGTCAGATATTGTACACCTACTCTGTACTGAGGATACAGAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CAA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCGTTTGTCTTTCCCAATaGGTCAAATTTCCCCAACGT +
Preference number: 5 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCVCLSQ*VKFPQR
Trigger: ACGTTGGGGAAATTTGACCAATTGGGAAAGACAAAC...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTGTGTTTTGTAGCCAGTaGTTGACATGGATACACCAA +
Preference number: 5 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIVFCSQ*LTWIHQ
Trigger: TTGGTGTATCCATGTCAACAACTGGCTACAAAACAC...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGTGTTTTGTAGCCAGTaGTTGACATGGATACACCAA +
Preference number: 5 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTVFCSQ*LTWIHQ
Trigger: TTGGTGTATCCATGTCAACAACTGGCTACAAAACAC...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp TACTGTTTGCATAACAGAGTAAATAGGCAAAGTCTAGCCATACAGCAGCAGTTCCTCCTTGGAAGAAGGTaGGTTATCATAGCACAATAT +
Preference number: 5 (lower is better)
Translates to: YCLHNRVNRQSLAIQQQFLLGRR*VIIAQY
Trigger: ATATTGTGCTATGATAACCAACCTTCTTCCAAGGAG...GAACTGCTGCTGTATGGCTAGACTTTGCCTATTTACTCTGTTATGCAAACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp CTCAAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTCGTAGCACTTTGCTGTaGCTGAAGCAATTTCACATA +
Preference number: 5 (lower is better)
Translates to: LKAEHSKPDFHYYQIPVIRSTLL*LKQFHI
Trigger: TATGTGAAATTGCTTCAGCAACAGCAAAGTGCTACG...AATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCCGAGCTTGTTCCTGCTaGATACAGTTAATCATACTT +
Preference number: 5 (lower is better)
Translates to: PDFHYYQIPVISNCTEKARACSC*IQLIIL
Trigger: AAGTATGATTAACTGTATCAAGCAGGAACAAGCTCG...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACTTGGGATTTACGAGCTaGTTCCTGCTTGATACAGTT +
Preference number: 5 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYLGFTS*FLLDTV
Trigger: AACTGTATCAAGCAGGAACAAGCTCGTAAATCCCAA...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CAA 90 bp GATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCACCCAAAAACTTCAAAGTTaGCAGCATCTGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: DFHYYQIPVISNCTEKATQKLQS*QHLSFL
Trigger: CAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTTG...GGTGGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTCTATCTCTGGAGCTTaGGGGATTAAGGAATACAGC +
Preference number: 5 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKSISGA*GIKEYS
Trigger: GCTGTATTCCTTAATCCCCAAAGCTCCAGAGATAGA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374707.1
CDS-3UTR CAA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAGGAGTTATCCAAATaGAAGTTAAGTGCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTEELSK*KLSALV
Trigger: GACCAAAGCACTTAACTTCAATTTGGATAACTCCTC...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACATTTTGTAGCCAGTTGTaGACATGGATACACCAACTA +
Preference number: 5 (lower is better)
Translates to: HSKPDFHYYQIPVISNCTFCSQL*TWIHQL
Trigger: TAGTTGGTGTATCCATGTCAACAACTGGCTACAAAA...TGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGCCTCAATCATCAGTTTTTaGCTTGGTATCTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: PDFHYYQIPVISNCTEKASIISF*LGICLL
Trigger: AAGCAAGCAGATACCAAGCAAAAAACTGATGATTGA...GGCCTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTCGTAGCACTTTGCTGTaGCTGAAGCAATTTCACATA +
Preference number: 5 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISRSTLL*LKQFHI
Trigger: TATGTGAAATTGCTTCAGCAACAGCAAAGTGCTACG...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp GAGTATGTGATACTATCAATTAAGGAACACCTGTATCTTCCTGAGCCAAAGTACCGAGCTTGTTCCTGCTaGATACAGTTAATCATACTT +
Preference number: 5 (lower is better)
Translates to: EYVILSIKEHLYLPEPKYRACSC*IQLIIL
Trigger: AAGTATGATTAACTGTATCAAGCAGGAACAAGCTCG...GTACTTTGGCTCAGGAAGATACAGGTGTTCCTTAATTGATAGTATCACATACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS-3UTR CAA 90 bp TCTAGAGTAATAGGCTTGAGAAAATACAAAAAGGCCACAAGTCATGCACAAATTTCTGTCTGGCAGCCTTaGAAAATTCTTCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SRVIGLRKYKKATSHAQISVWQP*KILQVP
Trigger: AGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAGA...AATTTGTGCATGACTTGTGGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481272.6
CDS-3UTR CAA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTCTGTCTGGCAGCCTTaGAAAATTCTTCAGGTTCCT +
Preference number: 5 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKSVWQP*KILQVP
Trigger: AGGAACCTGAAGAATTTTCAAAGGCTGCCAGACAGA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGATTGTGACTCTATCCTaGATCTGTCTGGCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKIVTLS*ICLAAF
Trigger: AAAGGCTGCCAGACAGATCAAGGATAGAGTCACAAT...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTCAAAAACTTCAAAGTTaGCAGCATCTGTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: VFNDKRFQASKQNTANLIQKLQS*QHLSFL
Trigger: CAGGAAAGACAGATGCTGCAAACTTTGAAGTTTTTG...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp GTGTTTAATGATAAAAGATTCCAGGCCTCAAAGCAGAACACAGCAAACCTGATTATGGTGTACCACTTCTaGTATGTTTCTTCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: VFNDKRFQASKQNTANLIMVYHF*YVSSVK
Trigger: CTTCACTGAAGAAACATACAAGAAGTGGTACACCAT...AATCAGGTTTGCTGTGTTCTGCTTTGAGGCCTGGAATCTTTTATCATTAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394926.7
CDS TCA 90 bp GATCAGAATACTCTCCAGCCACAGCCTTGTTACAAGCTCGCACTCTaGAATTCATATACTTTGAATCAAATTTTAAGCCTGATAGTGTAT +
Preference number: 5 (lower is better)
Translates to: DQNTLQPQPCYKLAL*NSYTLNQILSLIVY
Trigger: ATACACTATCAGGCTTAAAATTTGATTCAAAGTATATGAATTTCAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGAGTATTCTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS-3UTR CAA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGGACCTCCCAATAATGTaGTCCACTTTCAATAGCAGT +
Preference number: 5 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKDLPIM*STFNSS
Trigger: ACTGCTATTGAAAGTGGACAACATTATTGGGAGGTC...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCGTTTGTCTTTCCCAATaGGTCAAATTTCCCCAACGT +
Preference number: 5 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIVCLSQ*VKFPQR
Trigger: ACGTTGGGGAAATTTGACCAATTGGGAAAGACAAAC...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTGGTTTTACCCCAAGTTaGGGAAAGATATCTATGTCA +
Preference number: 5 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISGFTPS*GKISMS
Trigger: TGACATAGATATCTTTCCCAAACTTGGGGTAAAACC...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCAGTAATGGTCACTCCTaGGAAGAAGGTTGGTTATCA +
Preference number: 5 (lower is better)
Translates to: HAYCKIHTKLNYTEREVISNGHS*EEGWLS
Trigger: TGATAACCAACCTTCTTCCAAGGAGTGACCATTACT...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp GAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCTCTAGAGTAATAGGCTaGAGAAAATACAAAAAGGCC +
Preference number: 5 (lower is better)
Translates to: EHSKPDFHYYQIPVISNCSRVIG*RKYKKA
Trigger: GGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA...GCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCTGCCCAGCCATTTGGTaGTTTGGAAAGAACTGTTTA +
Preference number: 5 (lower is better)
Translates to: HAYCKIHTKLNYTEREVICPAIW*FGKNCL
Trigger: TAAACAGTTCTTTCCAAACAACCAAATGGCTGGGCA...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp TTTGGAATAAATGAACAGCCAGCATTTTACTTATCAAGAAACCCCAAGGCTTTATTGGGATTTACGAGCTaGTTCCTGCTTGATACAGTT +
Preference number: 5 (lower is better)
Translates to: FGINEQPAFYLSRNPKALLGFTS*FLLDTV
Trigger: AACTGTATCAAGCAGGAACAAGCTCGTAAATCCCAA...TAAAGCCTTGGGGTTTCTTGATAAGTAAAATGCTGGCTGTTCATTTATTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469022.5
CDS-3UTR CAA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGTTGGGATTTACGAGCTaGTTCCTGCTTGATACAGTT +
Preference number: 5 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKLGFTS*FLLDTV
Trigger: AACTGTATCAAGCAGGAACAAGCTCGTAAATCCCAA...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CCA 90 bp TTATTATGCTTTGCTGCAAATGTGTTTTGTAGCCAGTTGTTGACATaGATACACCAACTAGTGTTTGTCTTTCCCAATTGGTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: LLCFAANVFCSQLLT*IHQLVFVFPNWSNF
Trigger: GAAATTTGACCAATTGGGAAAGACAAACACTAGTTGGTGTATCCATGTCAACAACTGGCTACAAAACACATTTGCAGCAAAGCATAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS-3UTR CAA 90 bp AAAGCAGAACACAGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTTCAATCATCAGTTTTTaGCTTGGTATCTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: KAEHSKPDFHYYQIPVISSIISF*LGICLL
Trigger: AAGCAAGCAGATACCAAGCAAAAAACTGATGATTGA...ACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCTGTGTTCTGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
CDS-3UTR CAA 90 bp CATGCATACTGTAAGATACACACAAAACTAAACTATACTGAACGTGAGGTAATCGGTTTTACCCCAAGTTaGGGAAAGATATCTATGTCA +
Preference number: 5 (lower is better)
Translates to: HAYCKIHTKLNYTEREVIGFTPS*GKISMS
Trigger: TGACATAGATATCTTTCCCAAACTTGGGGTAAAACC...GATTACCTCACGTTCAGTATAGTTTAGTTTTGTGTGTATCTTACAGTATGCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp AAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAAAAGCTCCTTGGAAGAAGGTaGGTTATCATAGCACAATAT +
Preference number: 5 (lower is better)
Translates to: KPDFHYYQIPVISNCTEKLLGRR*VIIAQY
Trigger: ATATTGTGCTATGATAACCAACCTTCTTCCAAGGAG...CTTTTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS-3UTR CAA 90 bp AGCAAACCTGATTTTCACTACTACCAAATTCCTGTGATTAGTAACTGCACAGAATCTAGAGTAATAGGCTaGAGAAAATACAAAAAGGCC +
Preference number: 5 (lower is better)
Translates to: SKPDFHYYQIPVISNCTESRVIG*RKYKKA
Trigger: GGCCTTTTTGTATTTTCTCAAGCCTATTACTCTAGA...TTCTGTGCAGTTACTAATCACAGGAATTTGGTAGTAGTGAAAATCAGGTTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374707.1
ENST00000481272.6
CDS CCA 90 bp CTTAATATTATCAATTATCTCCCAGCATCGCTCATCCTTTACACGTaGAAGTCCATCAAAATTAGTCTTCCTATGTTCCAGTATAAAATG +
Preference number: 5 (lower is better)
Translates to: LNIINYLPASLILYT*KSIKISLPMFQYKM
Trigger: CATTTTATACTGGAACATAGGAAGACTAATTTTGATGGACTTCCACGTGTAAAGGATGAGCGATGCTGGGAGATAATTGATAATATTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS GCA 72 bp CTGAGGAGCGCACCGCGCCTGCGCGCAGCGGCTGACTaGTCCCGGGAAGTAGCCGTGGAGGGTGGGGAGCGC +
Preference number: 6 (lower is better)
Translates to: LRSAPRLRAAAD*SREVAVEGGER
Trigger: GCGCTCCCCACCCTCCACGGCTACTTCCCGGGAGCAGTCAGCCGCTGCGCGCAGGCGCGGTGCGCTCCTCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS CCA 72 bp AGCGATAGCGGTCTCTCCGGCCCTGAAATAGGCCACTaGGCATCCAGCAGCCGGCCGGTGCGGAGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SDSGLSGPEIGH*ASSSRPVRRAR
Trigger: CCGGGCCCTCCGCACCGGCCGGCTGCTGGATGCCCAGTGGCCTATTTCAGGGCCGGAGAGACCGCTATCGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495708.5
CDS TCA 72 bp AGCCCACTGGGCTCGAACCCGAGACGACGAACCGTGTaGGGAGGCTCAGCGAGATCGCACACCCCAAGACCG +
Preference number: 6 (lower is better)
Translates to: SPLGSNPRRRTV*GGSARSHTPRP
Trigger: CGGTCTTGGGGTGTGCGATCTCGCTGAGCCTCCTCACACGGTTCGTCGTCTCGGGTTCGAGCCCAGTGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000394926.7
ENST00000469022.5
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS CCA 72 bp CTCCTTAAAGCAGTATTTCTGGGAGTCCATGGCGAGTaGCTAAGCCCACTGGGCTCGAACCCGAGACGACGA +
Preference number: 6 (lower is better)
Translates to: LLKAVFLGVHGE*LSPLGSNPRRR
Trigger: TCGTCGTCTCGGGTTCGAGCCCAGTGGGCTTAGCCACTCGCCATGGACTCCCAGAAATACTGCTTTAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481272.6
ENST00000495708.5
CDS CCA 72 bp TACTGCTGGTGGCCTGGAGCCTACAGATGTTCGTTTTaGGGATGGTGTACCACTGCCCTTGTTCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: YCWWPGAYRCSF*GWCTTALVLFS
Trigger: GGAAAAGAGAACAAGGGCAGTGGTACACCATCCCCAAAACGAACATCTGTAGGCTCCAGGCCACCAGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484973.5
CDS CAA 72 bp TTACTGCTGGTGGCCTGGAGCCTACAGATGTTCGTTTaGGGGATGGTGTACCACTGCCCTTGTTCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: LLLVAWSLQMFV*GMVYHCPCSLF
Trigger: GAAAAGAGAACAAGGGCAGTGGTACACCATCCCCAAAACGAACATCTGTAGGCTCCAGGCCACCAGCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484973.5
CDS CCA 72 bp TACTGCTGGTGGCCTGGAGCCTACAGATGTTCGTTTTaGGGATGGTGTACCACTTCTTGTATGTTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: YCWWPGAYRCSF*GWCTTSCMFLQ
Trigger: CTGAAGAAACATACAAGAAGTGGTACACCATCCCCAAAACGAACATCTGTAGGCTCCAGGCCACCAGCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394926.7
CDS CAA 90 bp GAGTTATCTGCCACCAAACACTCTACTGGATCTATCTCTGGAGCTTaGGGGATTAAGGAATACAGCAGAATGTCTGAGAGTCCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: ELSATKHSTGSISGA*GIKEYSRMSESPAP
Trigger: TGGAGCTGGACTCTCAGACATTCTGCTGTATTCCTTAATCCCCAAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTGGCAGATAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374707.1
CDS CAA 72 bp TTACTGCTGGTGGCCTGGAGCCTACAGATGTTCGTTTaGGGGATGGTGTACCACTTCTTGTATGTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: LLLVAWSLQMFV*GMVYHFLYVSS
Trigger: TGAAGAAACATACAAGAAGTGGTACACCATCCCCAAAACGAACATCTGTAGGCTCCAGGCCACCAGCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394926.7
CDS TCA 72 bp CTGCTAGCTGAACCAGTCATTCCATTTTCACTTTTCTaGAGTGTTCTCACAGCACTTGGAACCTGCATCCCA +
Preference number: 6 (lower is better)
Translates to: LLAEPVIPFSLF*SVLTALGTCIP
Trigger: TGGGATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGGAATGACTGGTTCAGCTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CCA 72 bp CCACCAAACACTCTACTGGATCTATCTCTGGAGCTTTaGGGATTAAGGAATACAGCAGAATGTCTGAGAGTC +
Preference number: 6 (lower is better)
Translates to: PPNTLLDLSLEL*GLRNTAECLRV
Trigger: GACTCTCAGACATTCTGCTGTATTCCTTAATCCCCAAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374707.1
CDS CAA 72 bp GCCACCAAACACTCTACTGGATCTATCTCTGGAGCTTaGGGGATTAAGGAATACAGCAGAATGTCTGAGAGT +
Preference number: 6 (lower is better)
Translates to: ATKHSTGSISGA*GIKEYSRMSES
Trigger: ACTCTCAGACATTCTGCTGTATTCCTTAATCCCCAAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374707.1
CDS TCA 72 bp TCCACTTTCAATAGCAGTGTCTCCCAGCACTGTGTATaGTTCTCCAGTAAAACGATCTCTACTGCCTCTTAC +
Preference number: 6 (lower is better)
Translates to: STFNSSVSQHCV*FSSKTISTASY
Trigger: GTAAGAGGCAGTAGAGATCGTTTTACTGGAGAATCATACACAGTGCTGGGAGACACTGCTATTGAAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS TCA 72 bp TGGGGATGGTGTACCACTTCTTGTATGTTTCTTCAGTaGAGTAACATGGACACTGCCCTTGTTCTCTTTTCC +
Preference number: 6 (lower is better)
Translates to: WGWCTTSCMFLQ*SNMDTALVLFS
Trigger: GGAAAAGAGAACAAGGGCAGTGTCCATGTTACTTCACTGAAGAAACATACAAGAAGTGGTACACCATCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394926.7
CDS CCA 72 bp TCCATTTTCACTTTTCTGAAGTGTTCTCACAGCACTTaGAACCTGCATCCCAGTACTCAAAGAAAGTCCACC +
Preference number: 6 (lower is better)
Translates to: SIFTFLKCSHST*NLHPSTQRKST
Trigger: GGTGGACTTTCTTTGAGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CCA 72 bp GTTATCTGCCACCAAACACTCTACTGGATCTATCTCTaGAGCTTTGGGGACTGGCAAAAACTTCAAAGTTTG +
Preference number: 6 (lower is better)
Translates to: VICHQTLYWIYL*SFGDWQKLQSL
Trigger: CAAACTTTGAAGTTTTTGCCAGTCCCCAAAGCTCCAGAGATAGATCCAGTAGAGTGTTTGGTGGCAGATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000394926.7
ENST00000480279.1
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS CAA 90 bp AACCAGTCATTCCATTTTCACTTTTCTGAAGTGTTCTCACAGCACTaGGAACCTGCATCCCAGTACTCAAAGAAAGTCCACCACACCATA +
Preference number: 6 (lower is better)
Translates to: NQSFHFHFSEVFSQH*EPASQYSKKVHHTI
Trigger: TATGGTGTGGTGGACTTTCTTTGAGTACTGGGATGCAGGTTCCAAGTGCTGTGAGAACACTTCAGAAAAGTGAAAATGGAATGACTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS TCA 72 bp AAGACGGAGGGTAAACGTATTCTGAGTAGACACTATTaGGTAACAACATTGTTCAGGCTGCTAGCTGAACCA +
Preference number: 6 (lower is better)
Translates to: KTEGKRILSRHY*VTTLFRLLAEP
Trigger: TGGTTCAGCTAGCAGCCTGAACAATGTTGTTACTCAATAGTGTCTACTCAGAATACGTTTACCCTCCGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CAA 72 bp AGAGTCACTGGATCAGAATACTCTCCAGCCACAGCCTaGTTACAAGCTCGCACTCTGAAATTCATATACTTT +
Preference number: 6 (lower is better)
Translates to: RVTGSEYSPATA*LQARTLKFIYF
Trigger: AAAGTATATGAATTTCAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGAGTATTCTGATCCAGTGACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS GCA 72 bp CTTTCCCAATTGGTCAAATTTCCCCAACGTTTTGTATaGTACTCCCACACTGTAGGATTTACAATCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LSQLVKFPQRFV*YSHTVGFTILL
Trigger: CAGAAGGATTGTAAATCCTACAGTGTGGGAGTAGCATACAAAACGTTGGGGAAATTTGACCAATTGGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CCA 72 bp ATCAATTATCTCCCAGCATCGCTCATCCTTTACACGTaGAAGTCCATCAAAATTAGTCTTCCTATGTTCCAG +
Preference number: 6 (lower is better)
Translates to: INYLPASLILYT*KSIKISLPMFQ
Trigger: CTGGAACATAGGAAGACTAATTTTGATGGACTTCCACGTGTAAAGGATGAGCGATGCTGGGAGATAATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS CAA 90 bp TTGGTCTCTAGAGTCACTGGATCAGAATACTCTCCAGCCACAGCCTaGTTACAAGCTCGCACTCTGAAATTCATATACTTTGAATCAAAT +
Preference number: 6 (lower is better)
Translates to: LVSRVTGSEYSPATA*LQARTLKFIYFESN
Trigger: ATTTGATTCAAAGTATATGAATTTCAGAGTGCGAGCTTGTAACAAGGCTGTGGCTGGAGAGTATTCTGATCCAGTGACTCTAGAGACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS CCA 72 bp TTTGCTGCAAATGTGTTTTGTAGCCAGTTGTTGACATaGATACACCAACTAGTGTTTGTCTTTCCCAATTGG +
Preference number: 6 (lower is better)
Translates to: FAANVFCSQLLT*IHQLVFVFPNW
Trigger: CCAATTGGGAAAGACAAACACTAGTTGGTGTATCCATGTCAACAACTGGCTACAAAACACATTTGCAGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CAA 72 bp ACTTTCAGGTTCAAATGGGATGAGGAGTTATCCAAATaGAAGTTAAGTGCTTTGGTCTCTAGAGTCACTGGA +
Preference number: 6 (lower is better)
Translates to: TFRFKWDEELSK*KLSALVSRVTG
Trigger: TCCAGTGACTCTAGAGACCAAAGCACTTAACTTCAATTTGGATAACTCCTCATCCCATTTGAACCTGAAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS CAA 72 bp TTATGCTTTGCTGCAAATGTGTTTTGTAGCCAGTTGTaGACATGGATACACCAACTAGTGTTTGTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: LCFAANVFCSQL*TWIHQLVFVFP
Trigger: GGGAAAGACAAACACTAGTTGGTGTATCCATGTCAACAACTGGCTACAAAACACATTTGCAGCAAAGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS TCA 72 bp ACACTATTGAGTAACAACATTGTTCAGGCTGCTAGCTaGACCAGTCATTCCATTTTCACTTTTCTGAAGTGT +
Preference number: 6 (lower is better)
Translates to: TLLSNNIVQAAS*TSHSIFTFLKC
Trigger: ACACTTCAGAAAAGTGAAAATGGAATGACTGGTTCAGCTAGCAGCCTGAACAATGTTGTTACTCAATAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CCA 72 bp CACTCTACACATGTATCTTCAACTTTCAGGTTCAAATaGGATGAGGAGTTATCCAAATTGAAGTTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: HSTHVSSTFRFK*DEELSKLKLSA
Trigger: AGCACTTAACTTCAATTTGGATAACTCCTCATCCCATTTGAACCTGAAAGTTGAAGATACATGTGTAGAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS CAA 90 bp ACTTTATTATTATGCTTTGCTGCAAATGTGTTTTGTAGCCAGTTGTaGACATGGATACACCAACTAGTGTTTGTCTTTCCCAATTGGTCA +
Preference number: 6 (lower is better)
Translates to: TLLLCFAANVFCSQL*TWIHQLVFVFPNWS
Trigger: TGACCAATTGGGAAAGACAAACACTAGTTGGTGTATCCATGTCAACAACTGGCTACAAAACACATTTGCAGCAAAGCATAATAATAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS CAA 90 bp TTGACTTTATTATTATGCTTTGCTGCAAATGTGTTTTGTAGCCAGTaGTTGACATGGATACACCAACTAGTGTTTGTCTTTCCCAATTGG +
Preference number: 6 (lower is better)
Translates to: LTLLLCFAANVFCSQ*LTWIHQLVFVFPNW
Trigger: CCAATTGGGAAAGACAAACACTAGTTGGTGTATCCATGTCAACAACTGGCTACAAAACACATTTGCAGCAAAGCATAATAATAAAGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
CDS TCA 72 bp TACACATGTATCTTCAACTTTCAGGTTCAAATGGGATaGGGAGTTATCCAAATTGAAGTTAAGTGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: YTCIFNFQVQMG*GVIQIEVKCFG
Trigger: ACCAAAGCACTTAACTTCAATTTGGATAACTCCTCATCCCATTTGAACCTGAAAGTTGAAGATACATGTGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5
ENST00000495708.5
CDS CAA 72 bp TTATTATGCTTTGCTGCAAATGTGTTTTGTAGCCAGTaGTTGACATGGATACACCAACTAGTGTTTGTCTTT +
Preference number: 6 (lower is better)
Translates to: LLCFAANVFCSQ*LTWIHQLVFVF
Trigger: AAAGACAAACACTAGTTGGTGTATCCATGTCAACAACTGGCTACAAAACACATTTGCAGCAAAGCATAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374707.1
ENST00000394926.7
ENST00000481272.6
ENST00000484973.5