Pregenerated sensors for FSCB (Homo sapiens)
Ensembl gene IDs: ENSG00000189139Ensembl transcript IDs: ENST00000340446.5
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CAACCTGTATTCCAAGTCTTGGGGTCCCCTTTAATTTaGCTTATTGACAAAGCTACTTCCCGCTGCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: QPVFQVLGSPLI*LIDKATSRCPP Trigger: GGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGGGGACCCCAAGACTTGGAATACAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAACGCAACTGCAGTGGCTaGCTCAGCATCAGGAGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKRNCSG*LSIRSL Trigger: GAGACTCCTGATGCTGAGGCAGCCACTGCAGTTGCG...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGGGAGCCTTTTGTGCTaGGGGAGACCGAATTTCACC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKGSLLC*GRPNFT Trigger: GGTGAAATTCGGTCTCCCTCAGCACAAAAGGCTCCC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAAGCAGGAGCCTCTTCTaGAGAAGCCTCTGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKSRSLF*RSLCSC Trigger: GCAGCTACAGAGGCTTCTGCAGAAGAGGCTCCTGCT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTAACGGAGGCCTCTTCTaGAGGGACATCATCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCNGGLF*RDIISW Trigger: CCAGCTGATGATGTCCCTGCAGAAGAGGCCTCCGTT...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATCCTGCCACCTGCGGTaGCTGAAATTCTGTAGACAC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKSCHLR*LKFCRH Trigger: GTGTCTACAGAATTTCAGTCACCGCAGGTGGCAGGA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTAGTAGGAGCCTCTTCTaGAGGGGTCTCCATAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCSRSLF*RGLHSC Trigger: ACAGCTATGGAGACCCCTGCAGAAGAGGCTCCTACT...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGGGGGATGTTCATCATaGTCCAGTATCCTGTACGGC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKGGCSS*SSILYG Trigger: GCCGTACAGGATACTGGACCATGATGAACATCCCCC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGGCTGTACTTGGACATaGGTCTCTTCAGCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKGCTWT*VSSAGL Trigger: CAGACCTGCTGAAGAGACCCATGTCCAAGTACAGCC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTGGTCTCCATAGCTGTTaGAAGCTGAAGTTCTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCGLHSC*KLKFSS Trigger: GCTCGAGAACTTCAGCTTTCAACAGCTATGGAGACC...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTGCCACCTGCGGTGACTaGAATTCTGTAGACACATTC | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCATCGD*NSVDTF Trigger: GAATGTGTCTACAGAATTTCAGTCACCGCAGGTGGC...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTAGCTTAGGTACAACCTaGCTACAGTTCAGGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCSLGTT*LQFRRT Trigger: CGTCCTCCTGAACTGTAGTCAGGTTGTACCTAAGCT...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAAGTATCCTGTACGGCTaGTCTGCTGAGATCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKSILYG*SAEICP Trigger: TGGACAGATCTCAGCAGACCAGCCGTACAGGATACT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTAGGCTCTACTTTAGCTaGGGCCTCTTCAAGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFRLYFS*GLFKGA Trigger: GGCGCCCTTGAAGAGGCCCCAGCTAAAGTAGAGCCT...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATTCTTGCCTACACGCTaGGATAGGCTGATTAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKFLPTR*DRLIRV Trigger: GACTCTAATCAGCCTATCTCAGCGTGTAGGCAAGAA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTACGGCTGGTCTGCTaGGATCTGTCCATTTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKVRLVC*DLSIFS Trigger: ACTAAAAATGGACAGATCTCAGCAGACCAGCCGTAC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTAAGGCTGTACTTCAATaGGAGCCTTTTGTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCKAVLQ*EPFVLR Trigger: CCTCAGCACAAAAGGCTCCCATTGAAGTACAGCCTT...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTCACGCTGAGATAGGCTaGTTAGAGTCATCACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCHAEIG*LESSLS Trigger: AGAAAGTGATGACTCTAATCAGCCTATCTCAGCGTG...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAATAGCTGTTGAAAGCTaGAGTTCTCGAGCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKIAVES*SSRASS Trigger: AGAAGAGGCTCGAGAACTTCAGCTTTCAACAGCTAT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTAGAATTCTCCGCAACTaGAGTGGCTGCCTCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFRILRN*SGCLSI Trigger: GATGCTGAGGCAGCCACTGCAGTTGCGGAGAATTCT...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTAAAGCTACTTCCCGCTaGCCACCCTTTTCTAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCKATSR*PPFSKV Trigger: TACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTT...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGGATTTGCCTACCATTaGTTTGCTGGGTCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKGFAYH*FAGSSS Trigger: AGAAGATGACCCAGCAAACCAATGGTAGGCAAATCC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAAAGCAAATCAGCTGGTaGGGAATGTTTGTCAACGGA | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKKQISW*GMFVNG Trigger: TCCGTTGACAAACATTCCCCACCAGCTGATTTGCTT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTCAGAAGCAAATCAGCTaGTGGGGAATGTTTGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCQKQIS*WGMFVN Trigger: GTTGACAAACATTCCCCACCAGCTGATTTGCTTCTG...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGGAATTTCTACATCCTaGACACTCTCTGGCAATTCA | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKGISTS*TLSGNS Trigger: TGAATTGCCAGAGAGTGTTCAGGATGTAGAAATTCC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAACAGGGCATCTTCCTTTaGCTTTGTAGAAGAACTATC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKQGIFL*LCRRTI Trigger: GATAGTTCTTCTACAAAGTCAAAGGAAGATGCCCTG...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTCTGTTTGTTGCTGGTTaGAATTCAGGGTGTTCACTA | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCLFVAG*NSGCSL Trigger: TAGTGAACACCCTGAATTTCAACCAGCAACAAACAG...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTCTACCATTGGTTTGCTaGGTCATCTTCTCTTTCGAA | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCLPLVC*VIFSFE Trigger: TTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAG...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTGTATTACCAATACGATaGGTAGCTTTGGGGCTAGAT | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCVLPIR*VALGLD Trigger: ATCTAGCCCCAAAGCTACCCATCGTATTGGTAATAC...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTATCCTGAACACTCTCTaGCAATTCAATAGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCILNTL*QFNSSF Trigger: GAAGCTGCTATTGAATTGCCAGAGAGTGTTCAGGAT...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATTTCTATTTCAAGAGTaGGAGCCTGTCCATCATTGG | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKFLFQE*EPVHHW Trigger: CCAATGATGGACAGGCTCCCACTCTTGAAATAGAAA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTAGCTTTGGGGCTAGATaGTTTTGGTATGGCCATGTG | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFSFGAR*FWYGHV Trigger: CACATGGCCATACCAAAATCATCTAGCCCCAAAGCT...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATTTGTCCAAGTTTGCTaGAGCTCAGAAGATACTCTA | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKFVQVC*SSEDTL Trigger: TAGAGTATCTTCTGAGCTTCAGCAAACTTGGACAAA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTAGGAGTCTCTTCAGTTaGTGGCTGTACTTGGACATG | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFRSLFS*WLYLDM Trigger: CATGTCCAAGTACAGCCATCAACTGAAGAGACTCCT...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTTCAGGTAATAGAGGCTaGACATCAGCAAGGGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFSGNRG*TSARVS Trigger: AGAGACCCTTGCTGATGTTCAGCCTCTATTACCTGA...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTCAGTTTGCTGGGATTTaGCTACCATTGGTTTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFQFAGI*LPLVCW Trigger: CCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTG...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTTTCATTGCTGTTTGTTaGTGGTTGAAATTCAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCFIAVC*WLKFRV Trigger: CACCCTGAATTTCAACCAGCAACAAACAGCAATGAA...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTATTACATCAGTTTGCTaGGATTTGCCTACCATTGGT | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCITSVC*DLPTIG Trigger: ACCAATGGTAGGCAAATCCCAGCAAACTGATGTAAT...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAACAATGGTGTCTGTCTaGAGAGACTTACTAGTCATT | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKTMVSV*RDLLVI Trigger: AATGACTAGTAAGTCTCTCCAGACAGACACCATTGT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAATTGCTGTTTGTTGCTaGTTGAAATTCAGGGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKIAVCC*LKFRVF Trigger: GAACACCCTGAATTTCAACCAGCAACAAACAGCAAT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTGTTGATGGCTGTACTTaGACATGGGTCTCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFVDGCT*TWVSSA Trigger: TGCTGAAGAGACCCATGTCCAAGTACAGCCATCAAC...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTCTCTTTCGAATTTCTTaGCTACACGCTGAGATAGGC | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFLFRIS*LHAEIG Trigger: GCCTATCTCAGCGTGTAGGCAAGAAATTCGAAAGAG...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR GCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTTGCCTACCATTGGTTTaGTGGGTCATCTTCTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFCLPLV*WVIFSF Trigger: GAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCA...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAATACTACACTCTTGTTaGATCCCACCTTATTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: PLICLIDKATSRCPPFSKILHSC*IPPYSV Trigger: TACTGAATAAGGTGGGATCCAACAAGAGTGTAGTAT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CCA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTTGTAGAAGAACTATCTaGCCTGGAAATAACCACTAT | + |
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Preference number: 4 (lower is better) Translates to: ICLIDKATSRCPPFSKVCCRRTI*PGNNHY Trigger: ATAGTGGTTATTTCCAGGCCAGATAGTTCTTCTACA...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR TCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTTTCTCTAACATCAGCTaGCTTTTCTTCAGGTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFFSNIS*LFFRYH Trigger: GTGGTACCTGAAGAAAAGTCAGCTGATGTTAGAGAA...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR GCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTGGGTCCCCTTTAATTTaGCTTATTGACAAAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFGSPLI*LIDKAT Trigger: AGTAGCTTTGTCAATAAGGCAAATTAAAGGGGACCC...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR TCA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTCTGTCCATTTTTAGTTaGACTGAAGGTATGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFLSIFS*TEGMFG Trigger: ACCAAACATACCTTCAGTTCAACTAAAAATGGACAG...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS GCA 90 bp | AAGCAAATCAGCTGGTGGGGAATGTTTGTCAACGGAGGCCTCTTCTaGAGGGACATCATCAGCTGGGGGAGAGTGTACTGCAGCAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KQISWWGMFVNGGLF*RDIISWGRVYCSKG Trigger: ACCCTTGCTGCAGTACACTCTCCCCCAGCTGATGATGTCCCTGCAGAAGAGGCCTCCGTTGACAAACATTCCCCACCAGCTGATTTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 90 bp | AGAGGCCTCTCCTATAGGAAACTCCTCAGTCAGAAGCAAATCAGCTaGTGGGGAATGTTTGTCAACGGAGGCCTCTTCTGCAGGGACATC | + |
|
Preference number: 5 (lower is better) Translates to: RGLSYRKLLSQKQIS*WGMFVNGGLFCRDI Trigger: GATGTCCCTGCAGAAGAGGCCTCCGTTGACAAACATTCCCCACCAGCTGATTTGCTTCTGACTGAGGAGTTTCCTATAGGAGAGGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS TCA 90 bp | ACCGATCCTAATTTTACTGCTGGAATTCCTGCCACCTGCGGTGACTaGAATTCTGTAGACACATTCTCTACCAGAGCCTCATCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TDPNFTAGIPATCGD*NSVDTFSTRASSSG Trigger: CCCTGAAGATGAGGCTCTGGTAGAGAATGTGTCTACAGAATTTCAGTCACCGCAGGTGGCAGGAATTCCAGCAGTAAAATTAGGATCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGGGATTTGCCTACCATaGGTTTGCTGGGTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKGICLP*VCWVIF Trigger: GAAGATGACCCAGCAAACCAATGGTAGGCAAATCCC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATCAGTTTGCTGGGATTaGCCTACCATTGGTTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKSVCWD*PTIGLL Trigger: CAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTCAGGAGTCTCTTCAGTaGATGGCTGTACTTGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: ICLIDKATSRCPPFSKVCQESLQ*MAVLGH Trigger: ATGTCCAAGTACAGCCATCAACTGAAGAGACTCCTG...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTGCTGGTGGGGAATGTTaGTCAACGGAGGCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFAGGEC*STEASS Trigger: AGAAGAGGCCTCCGTTGACAAACATTCCCCACCAGC...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATTGCCTACCATTGGTTaGCTGGGTCATCTTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKLPTIG*LGHLLF Trigger: AAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTGTCCATGCTTTCTCTTaGTCCAAGTTTGCTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ICLIDKATSRCPPFSKVCVHAFS*SKFAEA Trigger: AGCTTCAGCAAACTTGGACAAAGAGAAAGCATGGAC...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGCTGTTTGTTGCTGGTaGAAATTCAGGGTGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKAVCCW*KFRVFT Trigger: AGTGAACACCCTGAATTTCAACCAGCAACAAACAGC...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS GCA 90 bp | TTTTCTCTATTACATCAGTTTGCTGGGATTTGCCTACCATTGGTTTaGTGGGTCATCTTCTCTTTCGAATTTCTTGCCTACACGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FSLLHQFAGICLPLV*WVIFSFEFLAYTLR Trigger: TCTCAGCGTGTAGGCAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTCATACTACACTCTTGTaGGATCCCACCTTATTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ICLIDKATSRCPPFSKVCHTTLL*DPTLFS Trigger: ACTGAATAAGGTGGGATCCAACAAGAGTGTAGTATG...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATTCCATACTACACTCTaGTTGGATCCCACCTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKFHTTL*LDPTLF Trigger: GAATAAGGTGGGATCCAACAAGAGTGTAGTATGGAA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTCTCTATTACATCAGTTaGCTGGGATTTGCCTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: ICLIDKATSRCPPFSKVCLYYIS*LGFAYH Trigger: ATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAG...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS-3UTR CAA 90 bp | ATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAGTATGTTCTCTTTGTCCAAGTTaGCTGAAGCTCAGAAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: ICLIDKATSRCPPFSKVCSLCPS*LKLRRY Trigger: GTATCTTCTGAGCTTCAGCAAACTTGGACAAAGAGA...ACATACTTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAAACAGCAGAACCTTCTaGTACAACAGGTACAGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKNSRTF*YNRYSY Trigger: GTAACTGTACCTGTTGTACAAGAAGGTTCTGCTGTT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS CCA 90 bp | TTTCTTTTTCTCTATTACATCAGTTTGCTGGGATTTGCCTACCATTaGTTTGCTGGGTCATCTTCTCTTTCGAATTTCTTGCCTACACGC | + |
|
Preference number: 5 (lower is better) Translates to: FLFLYYISLLGFAYH*FAGSSSLSNFLPTR Trigger: GCGTGTAGGCAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 90 bp | TTTGGTATGGCCATGTGTTTCTTTTTCTCTATTACATCAGTTTGCTaGGATTTGCCTACCATTGGTTTGCTGGGTCATCTTCTCTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: FGMAMCFFFSITSVC*DLPTIGLLGHLLFR Trigger: TCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAACACATGGCCATACCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTCCTGTATTCCAAGTCTaGGGGTCCCCTTTAATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFPVFQV*GSPLIC Trigger: GCAAATTAAAGGGGACCCCAAGACTTGGAATACAGG...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS TCA 90 bp | GGTCATCTTCTCTTTCGAATTTCTTGCCTACACGCTGAGATAGGCTaGTTAGAGTCATCACTTTCTTCCATTTCTAAGAGTAGTGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GHLLFRISCLHAEIG*LESSLSSISKSSDF Trigger: GAAATCACTACTCTTAGAAATGGAAGAAAGTGATGACTCTAATCAGCCTATCTCAGCGTGTAGGCAAGAAATTCGAAAGAGAAGATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS GCA 90 bp | TGGCCATGTGTTTCTTTTTCTCTATTACATCAGTTTGCTGGGATTTaGCTACCATTGGTTTGCTGGGTCATCTTCTCTTTCGAATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WPCVSFSLLHQFAGI*LPLVCWVIFSFEFL Trigger: AAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAACACATGGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS GCA 90 bp | GATTTTGGTATGGCCATGTGTTTCTTTTTCTCTATTACATCAGTTTaGTGGGATTTGCCTACCATTGGTTTGCTGGGTCATCTTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DFGMAMCFFFSITSV*WDLPTIGLLGHLLF Trigger: AAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAACACATGGCCATACCAAAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTATACGATGGGTAGCTTaGGGGCTAGATGATTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFIRWVA*GLDDFG Trigger: ACCAAAATCATCTAGCCCCAAAGCTACCCATCGTAT...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAAACTAAAGTATGTCTGTaGTTCCTTGTCCACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKTKVCL*FLVHFF Trigger: GAAAAAGTGGACAAGGAACAACAGACATACTTTAGT...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAATTTGCCTTATTGACAAAGCTACTTCCCGCTGCCCACCCTTTTCTAAATTTCTTCATTGCTGTTaGTTGCTGGTTGAAATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLICLIDKATSRCPPFSKFLHCC*LLVEIQ Trigger: CTGAATTTCAACCAGCAACAAACAGCAATGAAGAAA...TTTAGAAAAGGGTGGGCAGCGGGAAGTAGCTTTGTCAATAAGGCAAATTAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS TCA 90 bp | AGCAAAAATCTTTCCCGACGATTTATGTTTCAGGGCATCTTCCTTTaGCTTTGTAGAAGAACTATCTGGCCTGGAAATAACCACTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKNLSRRFMFQGIFL*LCRRTIWPGNNHYF Trigger: GAAATAGTGGTTATTTCCAGGCCAGATAGTTCTTCTACAAAGTCAAAGGAAGATGCCCTGAAACATAAATCGTCGGGAAAGATTTTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS-3UTR CAA 90 bp | GGCTGCAGATTAAACTTTACTCGTGTCAACAAGTTTACTGTAGGAAGGATATTTGAACTGAAGGTATGTTaGGTGGAATTTCTACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCRLNFTRVNKFTVGRIFELKVC*VEFLHP Trigger: AGGATGTAGAAATTCCACCAAACATACCTTCAGTTC...AAATATCCTTCCTACAGTAAACTTGTTGACACGAGTAAAGTTTAATCTGCAGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 72 bp | TCAGCATCAGGAGTCTCTTCAGTTGATGGCTGTACTTaGACATGGGTCTCTTCAGCAGGTCTGGGCTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SASGVSSVDGCT*TWVSSAGLGSA Trigger: AGCGGAGCCCAGACCTGCTGAAGAGACCCATGTCCAAGTACAGCCATCAACTGAAGAGACTCCTGATGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS TCA 72 bp | GCCTCTTCTCTAGGAGCCTCTTCAGGTAATAGAGGCTaGACATCAGCAAGGGTCTCTTCAACAGTGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSLGASSGNRG*TSARVSSTVGG Trigger: GCCTCCCACTGTTGAAGAGACCCTTGCTGATGTTCAGCCTCTATTACCTGAAGAGGCTCCTAGAGAAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CAA 90 bp | ATAGGAAACTCCTCAGTCAGAAGCAAATCAGCTGGTGGGGAATGTTaGTCAACGGAGGCCTCTTCTGCAGGGACATCATCAGCTGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: IGNSSVRSKSAGGEC*STEASSAGTSSAGG Trigger: TCCCCCAGCTGATGATGTCCCTGCAGAAGAGGCCTCCGTTGACAAACATTCCCCACCAGCTGATTTGCTTCTGACTGAGGAGTTTCCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 72 bp | TCCTATAGGAAACTCCTCAGTCAGAAGCAAATCAGCTaGTGGGGAATGTTTGTCAACGGAGGCCTCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SYRKLLSQKQIS*WGMFVNGGLFC Trigger: GCAGAAGAGGCCTCCGTTGACAAACATTCCCCACCAGCTGATTTGCTTCTGACTGAGGAGTTTCCTATAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 72 bp | GGGGGATGTTCATCATGGTCCAGTATCCTGTACGGCTaGTCTGCTGAGATCTGTCCATTTTTAGTTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: GGCSSWSSILYG*SAEICPFLVEL Trigger: CAGTTCAACTAAAAATGGACAGATCTCAGCAGACCAGCCGTACAGGATACTGGACCATGATGAACATCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS TCA 72 bp | AATTTTACTGCTGGAATTCCTGCCACCTGCGGTGACTaGAATTCTGTAGACACATTCTCTACCAGAGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: NFTAGIPATCGD*NSVDTFSTRAS Trigger: TGAGGCTCTGGTAGAGAATGTGTCTACAGAATTTCAGTCACCGCAGGTGGCAGGAATTCCAGCAGTAAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 72 bp | CATCAGTTTGCTGGGATTTGCCTACCATTGGTTTGCTaGGTCATCTTCTCTTTCGAATTTCTTGCCTACACG | + |
|
Preference number: 6 (lower is better) Translates to: HQFAGICLPLVC*VIFSFEFLAYT Trigger: CGTGTAGGCAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS TCA 72 bp | GGGTCATCTTCTCTTTCGAATTTCTTGCCTACACGCTaGGATAGGCTGATTAGAGTCATCACTTTCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GSSSLSNFLPTR*DRLIRVITFFH Trigger: ATGGAAGAAAGTGATGACTCTAATCAGCCTATCTCAGCGTGTAGGCAAGAAATTCGAAAGAGAAGATGACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS GCA 72 bp | TTACATCAGTTTGCTGGGATTTGCCTACCATTGGTTTaGTGGGTCATCTTCTCTTTCGAATTTCTTGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LHQFAGICLPLV*WVIFSFEFLAY Trigger: GTAGGCAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CAA 90 bp | TTTTTCTCTATTACATCAGTTTGCTGGGATTTGCCTACCATTGGTTaGCTGGGTCATCTTCTCTTTCGAATTTCTTGCCTACACGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FFSITSVCWDLPTIG*LGHLLFRISCLHAE Trigger: CTCAGCGTGTAGGCAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 72 bp | CTCTATTACATCAGTTTGCTGGGATTTGCCTACCATTaGTTTGCTGGGTCATCTTCTCTTTCGAATTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LYYISLLGFAYH*FAGSSSLSNFL Trigger: CAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS CCA 72 bp | GCCATGTGTTTCTTTTTCTCTATTACATCAGTTTGCTaGGATTTGCCTACCATTGGTTTGCTGGGTCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: AMCFFFSITSVC*DLPTIGLLGHL Trigger: AAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAACACATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS CAA 72 bp | ATTACATCAGTTTGCTGGGATTTGCCTACCATTGGTTaGCTGGGTCATCTTCTCTTTCGAATTTCTTGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: ITSVCWDLPTIG*LGHLLFRISCL Trigger: TAGGCAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS CAA 72 bp | TATGGCCATGTGTTTCTTTTTCTCTATTACATCAGTTaGCTGGGATTTGCCTACCATTGGTTTGCTGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: YGHVFLFLYYIS*LGFAYHWFAGS Trigger: TGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAACACATGGCCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS CAA 90 bp | GTTTCTTTTTCTCTATTACATCAGTTTGCTGGGATTTGCCTACCATaGGTTTGCTGGGTCATCTTCTCTTTCGAATTTCTTGCCTACACG | + |
|
Preference number: 6 (lower is better) Translates to: VSFSLLHQFAGICLP*VCWVIFSFEFLAYT Trigger: CGTGTAGGCAAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS CAA 90 bp | ATGGCCATGTGTTTCTTTTTCTCTATTACATCAGTTTGCTGGGATTaGCCTACCATTGGTTTGCTGGGTCATCTTCTCTTTCGAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MAMCFFFSITSVCWD*PTIGLLGHLLFRIS Trigger: AGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGAAAAAGAAACACATGGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS TCA 72 bp | CTCTTTCGAATTTCTTGCCTACACGCTGAGATAGGCTaGTTAGAGTCATCACTTTCTTCCATTTCTAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LFRISCLHAEIG*LESSLSSISKS Trigger: ACTCTTAGAAATGGAAGAAAGTGATGACTCTAATCAGCCTATCTCAGCGTGTAGGCAAGAAATTCGAAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS TCA 72 bp | TTCTGCCCAATTTCTTCATTGCTGTTTGTTGCTGGTTaGAATTCAGGGTGTTCACTAGCAAAAATCTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FCPISSLLFVAG*NSGCSLAKIFP Trigger: GGGAAAGATTTTTGCTAGTGAACACCCTGAATTTCAACCAGCAACAAACAGCAATGAAGAAATTGGGCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
||
| CDS CAA 72 bp | TCTCTATTACATCAGTTTGCTGGGATTTGCCTACCATaGGTTTGCTGGGTCATCTTCTCTTTCGAATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLLHQFAGICLP*VCWVIFSFEFL Trigger: AAGAAATTCGAAAGAGAAGATGACCCAGCAAACCAATGGTAGGCAAATCCCAGCAAACTGATGTAATAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CAA 72 bp | GAGATCTGTCCATTTTTAGTTGAACTGAAGGTATGTTaGGTGGAATTTCTACATCCTGAACACTCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: EICPFLVELKVC*VEFLHPEHSLA Trigger: TGCCAGAGAGTGTTCAGGATGTAGAAATTCCACCAAACATACCTTCAGTTCAACTAAAAATGGACAGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CAA 90 bp | GCTGATATTTTTCTGCCCAATTTCTTCATTGCTGTTTGTTGCTGGTaGAAATTCAGGGTGTTCACTAGCAAAAATCTTTCCCGACGATTT | + |
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Preference number: 6 (lower is better) Translates to: ADIFLPNFFIAVCCW*KFRVFTSKNLSRRF Trigger: AAATCGTCGGGAAAGATTTTTGCTAGTGAACACCCTGAATTTCAACCAGCAACAAACAGCAATGAAGAAATTGGGCAGAAAAATATCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS TCA 72 bp | AGAAGAACTATCTGGCCTGGAAATAACCACTATTTCTaGTTCACTAAAGTATGTCTGTTGTTCCTTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: RRTIWPGNNHYF*FTKVCLLFLVH Trigger: GTGGACAAGGAACAACAGACATACTTTAGTGAATCAGAAATAGTGGTTATTTCCAGGCCAGATAGTTCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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| CDS CCA 72 bp | ATTCATAAGCTATTGCATTCCATACTACACTCTTGTTaGATCCCACCTTATTCAGTAAGCGTCTTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: IHKLLHSILHSC*IPPYSVSVFLL Trigger: AAGAAGAAAGACGCTTACTGAATAAGGTGGGATCCAACAAGAGTGTAGTATGGAATGCAATAGCTTATGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340446.5 |
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