RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRYL (Homo sapiens)

Ensembl gene IDs: ENSG00000075539

Ensembl transcript IDs: ENST00000302806.5, ENST00000358350.9, ENST00000502520.5, ENST00000503238.6, ENST00000503339.5, ENST00000505437.5, ENST00000505759.1, ENST00000506685.1, ENST00000507711.5, ENST00000507873.7, ENST00000509886.5, ENST00000511343.1, ENST00000512810.1, ENST00000513401.5, ENST00000514617.5, ENST00000514783.5, ENST00000515684.1, ENST00000641795.1, ENST00000673760.1

Found 1159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGTGGCAGCGCCAGGCTTCCTCTTCATCATCATATGCCACGGGCTaGAAGGCGGCTATGATGGCAGAAAGAAATGGTGACGGCAGAGGC +
Preference number: 1 (lower is better)
Translates to: TWQRQASSSSSYATG*KAAMMAERNGDGRG
Trigger: GCCTCTGCCGTCACCATTTCTTTCTGCCATCATAGCCGCCTTTCAGCCCGTGGCATATGATGATGAAGAGGAAGCCTGGCGCTGCCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 90 bp TTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAGCACTGGTACTCCTaGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGC +
Preference number: 1 (lower is better)
Translates to: LVRFRLGVLLEHWYS*RDGVSPLSILSSER
Trigger: GCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTCTAGTAGCACCCCCAGCCTGAACCTCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 90 bp GCTGTAAGTGCCGCTTCTTCTTCCGAGGACTCATCTGTATCCTCCTaGTTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAGCACTGGTAC +
Preference number: 1 (lower is better)
Translates to: AVSAASSSEDSSVSS*LVRFRLGVLLEHWY
Trigger: GTACCAGTGCTCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCCTCGGAAGAAGAAGCGGCACTTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 90 bp GGAAGTGATGCGATAATACGGGGGATTATCCATGTGAGTGACCCCTaGACTGACAGGATCGGTCAGCTGAAGCTCACTCACCAGCTCTTC +
Preference number: 1 (lower is better)
Translates to: GSDAIIRGIIHVSDP*TDRIGQLKLTHQLF
Trigger: GAAGAGCTGGTGAGTGAGCTTCAGCTGACCGATCCTGTCAGTTCAGGGGTCACTCACATGGATAATCCCCCGTATTATCGCATCACTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 90 bp TTTCAGGAGAACCTGTATCTCCTCCATAGGTCTTGGGGATATCACTaGGTACGACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATA +
Preference number: 1 (lower is better)
Translates to: FQENLYLLHRSWGYH*VRQDSQSVTPPALI
Trigger: TATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGACCTATGGAGGAGATACAGGTTCTCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 90 bp GCATTATCTAGAGAAGCCTCCAAAGTTGGGGTCTCATCCCTGATTTaGAGCACTTCCTCTGTTGTGATGCTGCCAGTGGAATCTTCAGAC +
Preference number: 1 (lower is better)
Translates to: ALSREASKVGVSSLI*STSSVVMLPVESSD
Trigger: GTCTGAAGATTCCACTGGCAGCATCACAACAGAGGAAGTGCTTCAAATCAGGGATGAGACCCCAACTTTGGAGGCTTCTCTAGATAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 90 bp TCAGTGGCAGAATCACTGTTTAACATCTGTGTGCGTGAGAGTATCTaGCTTGCTGTAAGTGCCGCTTCTTCTTCCGAGGACTCATCTGTA +
Preference number: 1 (lower is better)
Translates to: SVAESLFNICVRESI*LAVSAASSSEDSSV
Trigger: TACAGATGAGTCCTCGGAAGAAGAAGCGGCACTTACAGCAAGCCAGATACTCTCACGCACACAGATGTTAAACAGTGATTCTGCCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 90 bp CTGAAGTGTCTCAGAATCCAGTGCTCACCATATTTCCCATTGGTTTaGCCTGTGCTAGAAGTTGGTATGATTGCACCATGCGTAGAGACT +
Preference number: 1 (lower is better)
Translates to: LKCLRIQCSPYFPLV*PVLEVGMIAPCVET
Trigger: AGTCTCTACGCATGGTGCAATCATACCAACTTCTAGCACAGGCCAAACCAATGGGAAATATGGTGAGCACTGGATTCTGAGACACTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp CCATCCTGCTCCACTGAGATGTCAACCTCATTGAGGATAGTGGTGTaGAGATGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTA +
Preference number: 1 (lower is better)
Translates to: PSCSTEMSTSLRIVV*RCEMAALLFPKLIL
Trigger: TAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACATCTGCACACCACTATCCTCAATGAGGTTGACATCTCAGTGGAGCAGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp GCAACAGTTCGGATGTTACTATTGGGTCCCATTACTATTAATAAGTaGAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: ATVRMLLLGPITINK*RSRRLQCSYTSGWQ
Trigger: CTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTGCACTTATTAATAGTAATGGGACCCAATAGTAACATCCGAACTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp CAGTTTAGTTTCTTTCCTAAAGGCCTGAAGTGTCTCAGAATCCAGTaGTCACCATATTTCCCATTGGTTTGGCCTGTGCTAGAAGTTGGT +
Preference number: 1 (lower is better)
Translates to: QFSFFPKGLKCLRIQ*SPYFPLVWPVLEVG
Trigger: ACCAACTTCTAGCACAGGCCAAACCAATGGGAAATATGGTGAGCACTGGATTCTGAGACACTTCAGGCCTTTAGGAAAGAAACTAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 90 bp CCAGTGCTCACCATATTTCCCATTGGTTTGGCCTGTGCTAGAAGTTaGTATGATTGCACCATGCGTAGAGACTCTCTTATTTCCAGATTA +
Preference number: 1 (lower is better)
Translates to: PVLTIFPIGLACARS*YDCTMRRDSLISRL
Trigger: TAATCTGGAAATAAGAGAGTCTCTACGCATGGTGCAATCATACCAACTTCTAGCACAGGCCAAACCAATGGGAAATATGGTGAGCACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 90 bp AATGAGTTTACTGAGGAGGTGCACGGTCATTTCTTGTGTAGATGCTaGGGTAAAACCCTTAAGGAAGAGCTGCTGAAGTCCTGGAAAATT +
Preference number: 1 (lower is better)
Translates to: NEFTEEVHGHFLCRC*GKTLKEELLKSWKI
Trigger: AATTTTCCAGGACTTCAGCAGCTCTTCCTTAAGGGTTTTACCTCAGCATCTACACAAGAAATGACCGTGCACCTCCTCAGTAAACTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp TTTCTTGAGGTAATGAATTCCATGAGGGTTTTGACTTTTCCATCCTaGTCCACTGAGATGTCAACCTCATTGAGGATAGTGGTGTGCAGA +
Preference number: 1 (lower is better)
Translates to: FLEVMNSMRVLTFPS*STEMSTSLRIVVCR
Trigger: TCTGCACACCACTATCCTCAATGAGGTTGACATCTCAGTGGAGCAGGATGGAAAAGTCAAAACCCTCATGGAATTCATTACCTCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp TCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGTaGACGGTCATTTCTTGTGTAGATGCTGAGGTAAAACCCTTAAGG +
Preference number: 1 (lower is better)
Translates to: STNVCLETEMSLLRR*TVISCVDAEVKPLR
Trigger: CCTTAAGGGTTTTACCTCAGCATCTACACAAGAAATGACCGTGCACCTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp ACAGTCTCTGGAATACGTGTGTGTACTGTACAAACTCATCATGTGTaGCAGATTGACAAGTGTTGGGCATTTTTCTTCTGCACAAACCTG +
Preference number: 1 (lower is better)
Translates to: TVSGIRVCTVQTHHV*QIDKCWAFFFCTNL
Trigger: CAGGTTTGTGCAGAAGAAAAATGCCCAACACTTGTCAATCTGGCACACATGATGAGTTTGTACAGTACACACACGTATTCCAGAGACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp TGCTCAGCGGCTTCTCTTTTCACATTGTATGTATCCAGGTGTTCTTaGAACTCCAAAACACCAAACTTGAGTGTTTCCAGCAAACCACAT +
Preference number: 1 (lower is better)
Translates to: CSAASLFTLYVSRCS*NSKTPNLSVSSKPH
Trigger: ATGTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACATACAATGTGAAAAGAGAAGCCGCTGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 90 bp TGTTCAGCACTCTTTATGCTAGGATTCTTGGCAGAAACATCCTCATaGTTCCAAAGGGGCCCTCTTTTTCTTGAGGTAATGAATTCCATG +
Preference number: 1 (lower is better)
Translates to: CSALFMLGFLAETSS*FQRGPLFLEVMNSM
Trigger: CATGGAATTCATTACCTCAAGAAAAAGAGGGCCCCTTTGGAACCATGAGGATGTTTCTGCCAAGAATCCTAGCATAAAGAGTGCTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 90 bp TGGAATACGTGTGTGTACTGTACAAACTCATCATGTGTGCCAGATTaGCAAGTGTTGGGCATTTTTCTTCTGCACAAACCTGACAATTGG +
Preference number: 1 (lower is better)
Translates to: WNTCVYCTNSSCVPD*QVLGIFLLHKPDNW
Trigger: CCAATTGTCAGGTTTGTGCAGAAGAAAAATGCCCAACACTTGTCAATCTGGCACACATGATGAGTTTGTACAGTACACACACGTATTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp ACCATATTTCCCATTGGTTTGGCCTGTGCTAGAAGTTGGTATGATTaGACCATGCGTAGAGACTCTCTTATTTCCAGATTAAGTTCCATC +
Preference number: 1 (lower is better)
Translates to: TIFPIGLACARSWYD*TMRRDSLISRLSSI
Trigger: GATGGAACTTAATCTGGAAATAAGAGAGTCTCTACGCATGGTGCAATCATACCAACTTCTAGCACAGGCCAAACCAATGGGAAATATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 90 bp TTTCCATTTGTTGTGCATCTGTGTTTATCCTATACATGTCTTCTTTaGCACCAAATGTCCTCTTACAATCATCTAGCCACTGCTCAGCGG +
Preference number: 1 (lower is better)
Translates to: FPFVVHLCLSYTCLL*HQMSSYNHLATAQR
Trigger: CCGCTGAGCAGTGGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAAACACAGATGCACAACAAATGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 90 bp CCAACTAACAGGAACCAAGGCATTAGAATTAGAACCAGAAGAAGTTaGGGAAGTACTTCTAGTGACAGCAATAACTTTTGGTTTCCCATT +
Preference number: 1 (lower is better)
Translates to: PTNRNQGIRIRTRRS*GSTSSDSNNFWFPI
Trigger: AATGGGAAACCAAAAGTTATTGCTGTCACTAGAAGTACTTCCTCAACTTCTTCTGGTTCTAATTCTAATGCCTTGGTTCCTGTTAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp AGCATCATCACTTCCAAGGAACTTTTAAATTTGGTACCAATGCGTTaGAGACTATCACCAAGAAAGCTGACTGCCTCATTAGTTATTTCT +
Preference number: 1 (lower is better)
Translates to: SIITSKELLNLVPMR*RLSPRKLTASLVIS
Trigger: AGAAATAACTAATGAGGCAGTCAGCTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAATTTAAAAGTTCCTTGGAAGTGATGATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 90 bp AAATTTGGTACCAATGCGTTGCAGACTATCACCAAGAAAGCTGACTaGCTCATTAGTTATTTCTCCAAACTTTCTTTGAATTGTCTGAAA +
Preference number: 1 (lower is better)
Translates to: KFGTNALQTITKKAD*LISYFSKLSLNCLK
Trigger: TTTCAGACAATTCAAAGAAAGTTTGGAGAAATAACTAATGAGGCAGTCAGCTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp AAGTGCAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAGTAATCCACCAGTGGTaGCCAGCAGCCTCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: KCRSRRLQCSYTSGWQWSVIHQW*PAASSW
Trigger: CCAGCTGGAGGCTGCTGGTCACCACTGGTGGATTAC...TGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCGCTGCTTTAGGGCCCTaGAAATCTGAAAGGATCTCC +
Preference number: 2 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAAALGP*KSERIS
Trigger: GGAGATCCTTTCAGATTTTCAGGGCCCTAAAGCAGC...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCGTAAGGCAAGAGGCTTaGTTCGCTATTCACCCCACA +
Preference number: 2 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAVRQEA*FAIHPT
Trigger: TGTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTAC...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGCATGTGAGTGACCCCTaGACTGACAGGATCGGTCAG +
Preference number: 2 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMHVSDP*TDRIGQ
Trigger: CTGACCGATCCTGTCAGTTCAGGGGTCACTCACATG...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp AAGTGCAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAGGCAGTGGCTCTCCTTaGTTATGCTCCATCACTTTC +
Preference number: 2 (lower is better)
Translates to: KCRSRRLQCSYTSGWQWSGSGSP*LCSITF
Trigger: GAAAGTGATGGAGCATAACCAAGGAGAGCCACTGCC...TGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTCATACACCTCAGGGTaGCAGTGGTCAAACCCTATA +
Preference number: 2 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMSYTSG*QWSNPI
Trigger: TATAGGGTTTGACCACTGCCACCCTGAGGTGTATGA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGCCAAAACACCAAACTTaGGTGTTTCCAGCAAACCAC +
Preference number: 2 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMPKHQT*VFPANH
Trigger: GTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGG...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTGTGTCAGACAGCATCTaGTTGACGTGGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: EMSISSFSEADSASLRILVSDSI*LTWQRQ
Trigger: CTGGCGCTGCCACGTCAATCAGATGCTGTCTGACAC...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAAAATCCAAGCAGCTTTaGAGGTCTTCAGCTAAAATG +
Preference number: 2 (lower is better)
Translates to: GLICILLIGEVQAGGATRKSKQL*RSSAKM
Trigger: CATTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTT...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACCATGTCGCCTTGCTGTaGGGAGAGGTTTTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYHVALL*GEVLSP
Trigger: TGGACTTAAAACCTCTCCCCACAGCAAGGCGACATG...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTGTGCGTGAGAGTATCTaGCTTGCTGTAAGTGCCGCT +
Preference number: 2 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCVRESI*LAVSAA
Trigger: AGCGGCACTTACAGCAAGCCAGATACTCTCACGCAC...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 90 bp AAAGGCCTGAAGTGTCTCAGAATCCAGTGCTCACCATATTTCCCATaGGTTTGGCCTGTGCTAGAAGTTGGTATGATTGCACCATGCGTA +
Preference number: 2 (lower is better)
Translates to: KGLKCLRIQCSPYFP*VWPVLEVGMIAPCV
Trigger: TACGCATGGTGCAATCATACCAACTTCTAGCACAGGCCAAACCAATGGGAAATATGGTGAGCACTGGATTCTGAGACACTTCAGGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp TGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTCCAGAAAGTTATCAGTaGATGCAAGGGTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: WFIRPSIISSVLLRRRSPPESYQ*MQGSIK
Trigger: TTTTATGGACCCTTGCATTCACTGATAACTTTCTGG...AGGTGACCGGCGGCGGAGTAACACACTGGATATAATGGATGGACGGATAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp CAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCTCTAATGAGAATAGCTaGCAGGCAGCATACATCTTT +
Preference number: 2 (lower is better)
Translates to: QKQAFTMFIHLRVAVVKPSNENS*QAAYIF
Trigger: AAAGATGTATGCTGCCTGTCAGCTATTCTCATTAGA...GGGTTTGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGGGGGATTATCCATGTaGGTGACCCCTGAACTGACA +
Preference number: 2 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEGGLSM*VTPELT
Trigger: TGTCAGTTCAGGGGTCACTCACATGGATAATCCCCC...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTTCCATCCTGCTCCACTaGGATGTCAACCTCATTGAG +
Preference number: 2 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCSILLH*DVNLIE
Trigger: CTCAATGAGGTTGACATCTCAGTGGAGCAGGATGGA...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp TGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTAGTCAAAAGGATCACTaGTATGTTACACCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: WFIRPSIISSVLLRRRSPSQKDH*YVTPVK
Trigger: CTTCACAGGTGTAACATAGCAGTGATCCTTTTGACT...AGGTGACCGGCGGCGGAGTAACACACTGGATATAATGGATGGACGGATAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTGAGCACTGGTACTCCTaGAGGGATGGAGTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSEHWYS*RDGVSP
Trigger: AGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTC...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp AAGTGCAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAAAATGAAACAGCCTTaGTTTCAGCCTCATTTCACC +
Preference number: 2 (lower is better)
Translates to: KCRSRRLQCSYTSGWQWSKMKQP*FQPHFT
Trigger: GGTGAAATGAGGCTGAAATCAAGGCTGTTTCATTTT...TGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTGCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGCCTTATCCCACATACTaGAAAATCAATGGTTTTTGC +
Preference number: 2 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMPYPTY*KINGFC
Trigger: GCAAAAACCATTGATTTTTCAGTATGTGGGATAAGG...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACCATCCCTCTCTGCCTaGCCCACACCCAAAAGTTTT +
Preference number: 2 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTPSLSA*PTPKSF
Trigger: AAAACTTTTGGGTGTGGGGCAGGCAGAGAGGGATGG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CCA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGATATTGTGGGAGATATTaGCAGCTGTTAAAATATCAG +
Preference number: 2 (lower is better)
Translates to: GLICILLIGEVQAGGATRYCGRY*QLLKYQ
Trigger: CTGATATTTTAACAGCTGCCAATATCTCCCACAATA...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTGGTTGTTTCAGTATTaGAGGCCATTATTGCAAACA +
Preference number: 2 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMWLFQY*RPLLQT
Trigger: TGTTTGCAATAATGGCCTCCAATACTGAAACAACCA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAGTGTGATGTATCTCTaGACACCATCCCTCTCTGCC +
Preference number: 2 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQSVMYL*TPSLSA
Trigger: GGCAGAGAGGGATGGTGTCCAGAGATACATCACACT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTATACATGTCTTCTTTaGCACCAAATGTCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMYTCLL*HQMSSY
Trigger: GTAAGAGGACATTTGGTGCCAAAGAAGACATGTATA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 90 bp TGTGCAACTTGTTTGACTGTAAGCACCCTGGGCTCATTAAACTCCTaGTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTG +
Preference number: 2 (lower is better)
Translates to: CATCLTVSTLGSLNS*FLRRTEATVRMLLL
Trigger: CAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAACAAGGAGTTTAATGAGCCCAGGGTGCTTACAGTCAAACAAGTTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 90 bp CTGCTCAGCGGCTTCTCTTTTCACATTGTATGTATCCAGGTGTTCTaGCAACTCCAAAACACCAAACTTGAGTGTTTCCAGCAAACCACA +
Preference number: 2 (lower is better)
Translates to: LLSGFSFHIVCIQVF*QLQNTKLECFQQTT
Trigger: TGTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACATACAATGTGAAAAGAGAAGCCGCTGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTTTTGGGCCAGCCATCTaGAAGTGTGGTCCACACATT +
Preference number: 2 (lower is better)
Translates to: EMSISSFSEADSASLRILFGPAI*KCGPHI
Trigger: AATGTGTGGACCACACTTGCAGATGGCTGGCCCAAA...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTGTACTCCTGGAGGGATaGAGTGTCCCCTTTGTCAAT +
Preference number: 2 (lower is better)
Translates to: EMSISSFSEADSASLRILVLLEG*SVPFVN
Trigger: ATTGACAAAGGGGACACTCCATCCCTCCAGGAGTAC...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGTGCTACTAGAGCACTaGTACTCCTGGAGGGATGGA +
Preference number: 2 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAVLLEH*YSWRDG
Trigger: TCCATCCCTCCAGGAGTACCAGTGCTCTAGTAGCAC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 90 bp AATGTTGTATCTGAGAAGGAGTCATGCAGGTATCTGCACACGACATaGATCCAGTTAGAACAGTCTCTGGAATACGTGTGTGTACTGTAC +
Preference number: 2 (lower is better)
Translates to: NVVSEKESCRYLHTT*IQLEQSLEYVCVLY
Trigger: GTACAGTACACACACGTATTCCAGAGACTGTTCTAACTGGATCAATGTCGTGTGCAGATACCTGCATGACTCCTTCTCAGATACAACATT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCCAGAAAGTTATCAGTaGATGCAAGGGTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: ALISASFHLLLVVSVLEAPESYQ*MQGSIK
Trigger: TTTTATGGACCCTTGCATTCACTGATAACTTTCTGG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR TCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCCCAGCCGCACTGTGCTaGTCACCATATTTGTTTCCA +
Preference number: 2 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAPAALC*SPYLFP
Trigger: TGGAAACAAATATGGTGATCAGCACAGTGCGGCTGG...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGGCTCTCCTTGGTTATaGTCCATCACTTTCAGTCGC +
Preference number: 2 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAGSPWL*SITFSR
Trigger: GCGACTGAAAGTGATGGAGCATAACCAAGGAGAGCC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTAATCACAAATCCCTGTaGATCTTCTCCTGGATCCCC +
Preference number: 2 (lower is better)
Translates to: EMSISSFSEADSASLRILNHKSL*IFSWIP
Trigger: GGGGATCCAGGAGAAGATGCACAGGGATTTGTGATT...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGGCTTTTCCTGTTAGCTaGATACTTGTTTCCCATTAT +
Preference number: 2 (lower is better)
Translates to: GSVVDCTSYIPFSLREERAFPVS*ILVSHY
Trigger: ATAATGGGAAACAAGTATGCAGCTAACAGGAAAAGC...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCTCTTGGGGATATCACTaGGTACGACAAGACTCGCAG +
Preference number: 2 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLASWGYH*VRQDSQ
Trigger: CTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGA...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 90 bp TCCTTGTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATaGGGTCCCATTACTATTAATAAGTGCAGAAGCAGGCGTTTACAA +
Preference number: 2 (lower is better)
Translates to: SLFLRRTEATVRMLL*GPITINKCRSRRLQ
Trigger: TTGTAAACGCCTGCTTCTGCACTTATTAATAGTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAACAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp TCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCACAGCTTGATGCGTATAGCTaGCTGCATGTTCATGTGGAT +
Preference number: 2 (lower is better)
Translates to: SSHLSSSSFRAKVTSSSQLDAYS*LHVHVD
Trigger: ATCCACATGAACATGCAGTCAGCTATACGCATCAAG...CTGTGAAGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACTTTTAGGCATGCTCTaGGACGTTATCACCAAACAT +
Preference number: 2 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQLLGML*DVITKH
Trigger: ATGTTTGGTGATAACGTCTCAGAGCATGCCTAAAAG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGAAAATCAATGGTTTTTaGAAACGAGTCTTGATGCGT +
Preference number: 2 (lower is better)
Translates to: GSVVDCTSYIPFSLREERKINGF*KRVLMR
Trigger: ACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGATTGTTCAAAACCATTaGAGTGGCTTGTGGAGATCC +
Preference number: 2 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEIVQNH*SGLWRS
Trigger: GGATCTCCACAAGCCACTGCAATGGTTTTGAACAAT...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTAAGATCCTCCAGAGCTaGTACTGTATCGGGATTCTA +
Preference number: 2 (lower is better)
Translates to: EMSISSFSEADSASLRILKILQS*YCIGIL
Trigger: TAGAATCCCGATACAGTAGCAGCTCTGGAGGATCTT...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGTTGACTTTTCCATCCTaGTCCACTGAGATGTCAACC +
Preference number: 2 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLLTFPS*STEMST
Trigger: GGTTGACATCTCAGTGGAGCAGGATGGAAAAGTCAA...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACGTTGCAGTGAGAGGCTaGTTTAGGGCCCTGAAAATC +
Preference number: 2 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNVAVRG*FRALKI
Trigger: GATTTTCAGGGCCCTAAAGCAGCCTCTCACTGCAAC...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATTGGTACCAATGCGTTaGAGACTATCACCAAGAAAG +
Preference number: 2 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQLVPMR*RLSPRK
Trigger: CTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAAATCCAAGCAGCTTTaGAGGTCTTCAGCTAAAATG +
Preference number: 2 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQKSKQL*RSSAKM
Trigger: CATTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTAAAATAATCTTGCAGTaGTCTTTTAGGCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCKIILQ*SFRHAL
Trigger: CAGAGCATGCCTAAAAGAGCACTGCAAGATTATTTT...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATTCACGCAGTTATTGTaGGAGATATTGGCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTFTQLL*EILAAV
Trigger: AACAGCTGCCAATATCTCCCACAATAACTGCGTGAA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACTCAAAACCATTGCAGTaGCTTGTGGAGATCCCCATC +
Preference number: 2 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNSKPLQ*LVEIPI
Trigger: GATGGGGATCTCCACAAGCCACTGCAATGGTTTTGA...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATaGGAGGCCATTATTGCAAACATTCTTGGAATTCTTTTCTTTCCC +
Preference number: 2 (lower is better)
Translates to: ALISASFHLLLVVSV*EAIIANILGILFFP
Trigger: GGGAAAGAAAAGAATTCCAAGAATGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR CAA 90 bp CAGCATCATCACTTCCAAGGAACTTTTAAATTTGGTACCAATGCGTaGCAGACTATCACCAAGAAAGCTGACTGCCTCATTAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: QHHHFQGTFKFGTNA*QTITKKADCLISYF
Trigger: GAAATAACTAATGAGGCAGTCAGCTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAATTTAAAAGTTCCTTGGAAGTGATGATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATCTTGATGCGTATAGCTaGCTGCATGTTCATGTGGAT +
Preference number: 2 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYLDAYS*LHVHVD
Trigger: ATCCACATGAACATGCAGTCAGCTATACGCATCAAG...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR TCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCCTTTTAGGCATGCTCTaGGACGTTATCACCAAACAT +
Preference number: 2 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLALLGML*DVITKH
Trigger: ATGTTTGGTGATAACGTCTCAGAGCATGCCTAAAAG...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTTATAGGATCATGATATaGGGTTTGAGAAAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVYRIMI*GLRKGR
Trigger: TCTGCCCTTTCTCAAACCTCATATCATGATCCTATA...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGAAATCAAGAATTCCTTaGCACACAAGAGATTCCTGC +
Preference number: 2 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLKSRIP*HTRDSC
Trigger: GCAGGAATCTCTTGTGTGTCAAGGAATTCTTGATTT...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACAGCCTCATTTCACCTaGTTTTGGTTGTTTCAGTAT +
Preference number: 2 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKQPHFT*FWLFQY
Trigger: ATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAAAATAATCTTGCAGTaGTCTTTTAGGCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQKIILQ*SFRHAL
Trigger: CAGAGCATGCCTAAAAGAGCACTGCAAGATTATTTT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGTATCCAGGTGTTCTTaGAACTCCAAAACACCAAAC +
Preference number: 2 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAVSRCS*NSKTPN
Trigger: GTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATAC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTTCACGCAGTTATTGTaGGAGATATTGGCAGCTGTT +
Preference number: 2 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAFTQLL*EILAAV
Trigger: AACAGCTGCCAATATCTCCCACAATAACTGCGTGAA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACATTTCACCTGCTTTTaGTTGTTTCAGTATTGGAGG +
Preference number: 2 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTHFTCF*LFQYWR
Trigger: CCTCCAATACTGAAACAACCAAAAGCAGGTGAAATG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATAAAATGAAACAGCCTTaGTTTCAGCCTCATTTCACC +
Preference number: 2 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNKMKQP*FQPHFT
Trigger: GGTGAAATGAGGCTGAAATCAAGGCTGTTTCATTTT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCCTTTTAGGCATGCTCTaGGACGTTATCACCAAACAT +
Preference number: 2 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIILLGML*DVITKH
Trigger: ATGTTTGGTGATAACGTCTCAGAGCATGCCTAAAAG...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR TCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGTACCTAAATATACAATaGCCTTCTTCACGTAAGGCA +
Preference number: 2 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLYLNIQ*PSSRKA
Trigger: TGCCTTACGTGAAGAAGGTCATTGTATATTTAGGTA...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAAATCCAAGCAGCTTTaGAGGTCTTCAGCTAAAATG +
Preference number: 2 (lower is better)
Translates to: KINGFCKRVLMRIADCMFKSKQL*RSSAKM
Trigger: CATTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATGCGTATAGCTGACTaGATGTTCATGTGGATGGAT +
Preference number: 2 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKMRIAD*MFMWMD
Trigger: ATCCATCCACATGAACATGCAGTCAGCTATACGCAT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCTGTTTAACATCTGTGTaGGTGAGAGTATCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: QEFLDTQEIPAVLELYRICLTSV*VRVSGL
Trigger: CAAGCCAGATACTCTCACGCACACAGATGTTAAACA...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATATTGTGGGAGATATTaGCAGCTGTTAAAATATCAG +
Preference number: 2 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQYCGRY*QLLKYQ
Trigger: CTGATATTTTAACAGCTGCCAATATCTCCCACAATA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCATTTCACCTGCTTTTaGTTGTTTCAGTATTGGAGG +
Preference number: 2 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAHFTCF*LFQYWR
Trigger: CCTCCAATACTGAAACAACCAAAAGCAGGTGAAATG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACCAGAAAGTTATCAGTaGATGCAAGGGTCCATAAAA +
Preference number: 2 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKPESYQ*MQGSIK
Trigger: TTTTATGGACCCTTGCATTCACTGATAACTTTCTGG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR TCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACCCTTATCCCACATACTaGAAAATCAATGGTTTTTGC +
Preference number: 2 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDPYPTY*KINGFC
Trigger: GCAAAAACCATTGATTTTTCAGTATGTGGGATAAGG...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAACACTAAAAAGTAGATaGTGCCAGAAAGTTATCAGT +
Preference number: 2 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTTLKSR*CQKVIS
Trigger: ACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAATGCGTATAGCTGACTaGATGTTCATGTGGATGGAT +
Preference number: 2 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKMRIAD*MFMWMD
Trigger: ATCCATCCACATGAACATGCAGTCAGCTATACGCAT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAAAAATCAATGGTTTTTaGAAACGAGTCTTGATGCGT +
Preference number: 2 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTKINGF*KRVLMR
Trigger: ACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATAAAATAATCTTGCAGTaGTCTTTTAGGCATGCTCTG +
Preference number: 2 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNKIILQ*SFRHAL
Trigger: CAGAGCATGCCTAAAAGAGCACTGCAAGATTATTTT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACGCATGTTCATGTGGATaGATGATTAAGCATCAATTG +
Preference number: 2 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDACSCG*MIKHQL
Trigger: CAATTGATGCTTAATCATCCATCCACATGAACATGC...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGCATGTTCATGTGGATaGATGATTAAGCATCAATTG +
Preference number: 2 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAACSCG*MIKHQL
Trigger: CAATTGATGCTTAATCATCCATCCACATGAACATGC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 90 bp GCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTaGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: AARKLSVNARVHKRC*VNILHHLQFSFFPK
Trigger: TTTAGGAAAGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTACACTAAAAAGTAGATaGTGCCAGAAAGTTATCAGT +
Preference number: 2 (lower is better)
Translates to: CEMAALLFPKLILEEVELTLKSR*CQKVIS
Trigger: ACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGT...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAACACTAAAAAGTAGATaGTGCCAGAAAGTTATCAGT +
Preference number: 2 (lower is better)
Translates to: NETALISASFHLLLVVSVTLKSR*CQKVIS
Trigger: ACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACTGTAGTAATGATTGCTaGATACTGGACAATCCTTTC +
Preference number: 2 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNCSNDC*ILDNPF
Trigger: GAAAGGATTGTCCAGTATGCAGCAATCATTACTACA...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTATTGTGGGAGATATTaGCAGCTGTTAAAATATCAG +
Preference number: 2 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNYCGRY*QLLKYQ
Trigger: CTGATATTTTAACAGCTGCCAATATCTCCCACAATA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATGGTTGTTTCAGTATTaGAGGCCATTATTGCAAACA +
Preference number: 2 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKWLFQY*RPLLQT
Trigger: TGTTTGCAATAATGGCCTCCAATACTGAAACAACCA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACATTTCACCTGCTTTTaGTTGTTTCAGTATTGGAGG +
Preference number: 2 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKHFTCF*LFQYWR
Trigger: CCTCCAATACTGAAACAACCAAAAGCAGGTGAAATG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACAGAAGTAAGTCAGGATaGTCTGGTATTGTTTCATCA +
Preference number: 2 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNRSKSG*SGIVSS
Trigger: TGATGAAACAATACCAGACCATCCTGACTTACTTCT...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACCTTATCCCACATACTaGAAAATCAATGGTTTTTGC +
Preference number: 2 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKPYPTY*KINGFC
Trigger: GCAAAAACCATTGATTTTTCAGTATGTGGGATAAGG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR GCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAACACTAAAAAGTAGATaGTGCCAGAAAGTTATCAGT +
Preference number: 2 (lower is better)
Translates to: ILNSGITEPSLKEKSQWITLKSR*CQKVIS
Trigger: ACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGT...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGCATGTTCATGTGGATaGATGATTAAGCATCAATTG +
Preference number: 2 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKACSCG*MIKHQL
Trigger: CAATTGATGCTTAATCATCCATCCACATGAACATGC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACTGCAGGCATCTACTTTaGTTAGTTATCAACAATCAT +
Preference number: 2 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNCRHLL*LVINNH
Trigger: ATGATTGTTGATAACTAACCAAAGTAGATGCCTGCA...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp CTGCAGAGGACCCGTCGGTGTCAGACAGCATCTGATTaGCGTGGCAGCGCCAGGCTTCCTCTTCATCATCAT +
Preference number: 3 (lower is better)
Translates to: LQRTRRCQTASD*RGSARLPLHHH
Trigger: ATGATGATGAAGAGGAAGCCTGGCGCTGCCACGTCAATCAGATGCTGTCTGACACCGACGGGTCCTCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp AACACTGCAGAGGACCCGTCGGTGTCAGACAGCATCTaGTTGACGTGGCAGCGCCAGGCTTCCTCTTCATCA +
Preference number: 3 (lower is better)
Translates to: NTAEDPSVSDSI*LTWQRQASSSS
Trigger: TGATGAAGAGGAAGCCTGGCGCTGCCACGTCAATCAGATGCTGTCTGACACCGACGGGTCCTCTGCAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp TTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAGCACTaGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCA +
Preference number: 3 (lower is better)
Translates to: LVRFRLGVLLEH*YSWRDGVSPLS
Trigger: TGACAAAGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTCTAGTAGCACCCCCAGCCTGAACCTCACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp GCCGCTTCTTCTTCCGAGGACTCATCTGTATCCTCCTaGTTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAG +
Preference number: 3 (lower is better)
Translates to: AASSSEDSSVSS*LVRFRLGVLLE
Trigger: CTCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCCTCGGAAGAAGAAGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp TTCAGGCTGGGGGTGCTACTAGAGCACTGGTACTCCTaGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCC +
Preference number: 3 (lower is better)
Translates to: FRLGVLLEHWYS*RDGVSPLSILS
Trigger: GGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTCTAGTAGCACCCCCAGCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp CTTCATCATCATATGCCACGGGCTGAAAGGCGGCTATaGTGGCAGAAAGAAATGGTGACGGCAGAGGCGACG +
Preference number: 3 (lower is better)
Translates to: LHHHMPRAERRL*WQKEMVTAEAT
Trigger: CGTCGCCTCTGCCGTCACCATTTCTTTCTGCCATCATAGCCGCCTTTCAGCCCGTGGCATATGATGATGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAAACCATTGCAGTGGCTaGTGGAGATCCCCATCCTTC +
Preference number: 3 (lower is better)
Translates to: GLICILLIGEVQAGGATRNHCSG*WRSPSF
Trigger: GAAGGATGGGGATCTCCACAAGCCACTGCAATGGTT...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp GCGATAATACGGGGGATTATCCATGTGAGTGACCCCTaGACTGACAGGATCGGTCAGCTGAAGCTCACTCAC +
Preference number: 3 (lower is better)
Translates to: AIIRGIIHVSDP*TDRIGQLKLTH
Trigger: GTGAGTGAGCTTCAGCTGACCGATCCTGTCAGTTCAGGGGTCACTCACATGGATAATCCCCCGTATTATCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp CGCCAGGCTTCCTCTTCATCATCATATGCCACGGGCTaGAAGGCGGCTATGATGGCAGAAAGAAATGGTGAC +
Preference number: 3 (lower is better)
Translates to: RQASSSSSYATG*KAAMMAERNGD
Trigger: GTCACCATTTCTTTCTGCCATCATAGCCGCCTTTCAGCCCGTGGCATATGATGATGAAGAGGAAGCCTGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp AACCTGTATCTCCTCCATAGGTCTTGGGGATATCACTaGGTACGACAAGACTCGCAGAGCGTGACACCACCA +
Preference number: 3 (lower is better)
Translates to: NLYLLHRSWGYH*VRQDSQSVTPP
Trigger: TGGTGGTGTCACGCTCTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGACCTATGGAGGAGATACAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCATCATGTGTGCCAGATaGACAAGTGTTGGGCATTTT +
Preference number: 3 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAIMCAR*TSVGHF
Trigger: AAAATGCCCAACACTTGTCAATCTGGCACACATGAT...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCTATCTGCACACGACATaGATCCAGTTAGAACAGTCT +
Preference number: 3 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAYLHTT*IQLEQS
Trigger: AGACTGTTCTAACTGGATCAATGTCGTGTGCAGATA...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp TTATTTTCAGGTTTTTGGGCCAGCCATCTGCAAGTGTaGTCCACACATTCTCCACCTCCGACCAGGCCAGTT +
Preference number: 3 (lower is better)
Translates to: LFSGFWASHLQV*STHSPPPTRPV
Trigger: AACTGGCCTGGTCGGAGGTGGAGAATGTGTGGACCACACTTGCAGATGGCTGGCCCAAAAACCTGAAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp TGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTGAGATGTCAACCTCATaGAGGATAGTGGTGTGCAGA +
Preference number: 3 (lower is better)
Translates to: WFIRPSIISSVLLRRRSPEMSTS*RIVVCR
Trigger: TCTGCACACCACTATCCTCAATGAGGTTGACATCTC...AGGTGACCGGCGGCGGAGTAACACACTGGATATAATGGATGGACGGATAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGCATCCACAAAGACTGTaGGGCATTCTGAACACAGCA +
Preference number: 3 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMHPQRL*GILNTA
Trigger: TGCTGTGTTCAGAATGCCCAACAGTCTTTGTGGATG...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp AGAGAAGCCTCCAAAGTTGGGGTCTCATCCCTGATTTaGAGCACTTCCTCTGTTGTGATGCTGCCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: REASKVGVSSLI*STSSVVMLPVE
Trigger: TTCCACTGGCAGCATCACAACAGAGGAAGTGCTTCAAATCAGGGATGAGACCCCAACTTTGGAGGCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp ACTGAGGAGGTGCACGGTCATTTCTTGTGTAGATGCTaGGGTAAAACCCTTAAGGAAGAGCTGCTGAAGTCC +
Preference number: 3 (lower is better)
Translates to: TEEVHGHFLCRC*GKTLKEELLKS
Trigger: GGACTTCAGCAGCTCTTCCTTAAGGGTTTTACCTCAGCATCTACACAAGAAATGACCGTGCACCTCCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp ATATTTCAGGAGAACCTGTATCTCCTCCATAGGTCTTaGGGATATCACTGGGTACGACAAGACTCGCAGAGC +
Preference number: 3 (lower is better)
Translates to: IFQENLYLLHRS*GYHWVRQDSQS
Trigger: GCTCTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGACCTATGGAGGAGATACAGGTTCTCCTGAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp GAATCACTGTTTAACATCTGTGTGCGTGAGAGTATCTaGCTTGCTGTAAGTGCCGCTTCTTCTTCCGAGGAC +
Preference number: 3 (lower is better)
Translates to: ESLFNICVRESI*LAVSAASSSED
Trigger: GTCCTCGGAAGAAGAAGCGGCACTTACAGCAAGCCAGATACTCTCACGCACACAGATGTTAAACAGTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp GAAGCGGACTCAGCTTCTTTGAGGATACTTTCCAGTTaGGCAAGTTCCTCTGACATGTTGATGACCTCTGCT +
Preference number: 3 (lower is better)
Translates to: EADSASLRILSS*ASSSDMLMTSA
Trigger: AGCAGAGGTCATCAACATGTCAGAGGAACTTGCCCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAACTTCATCATGTCGCCTaGCTGTGGGGAGAGGTTTTA +
Preference number: 3 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKLHHVA*LWGEVL
Trigger: TAAAACCTCTCCCCACAGCAAGGCGACATGATGAAG...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCTTCACCTGCTTTTGGTaGTTTCAGTATTGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: TRLAERDTTSFNMLRASFFTCFW*FQYWRP
Trigger: TGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAA...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCTTTTGCAAACGAGTCTaGATGCGTATAGCTGACTGC +
Preference number: 3 (lower is better)
Translates to: TRLAERDTTSFNMLRASFFCKRV*MRIADC
Trigger: GCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAA...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp TGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTCTGCAGGCATCTACTTaGGTTAGTTATCAACAATCA +
Preference number: 3 (lower is better)
Translates to: WFIRPSIISSVLLRRRSPLQAST*VSYQQS
Trigger: TGATTGTTGATAACTAACCAAAGTAGATGCCTGCAG...AGGTGACCGGCGGCGGAGTAACACACTGGATATAATGGATGGACGGATAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCAATTCCATGAGGGTTTaGACTTTTCCATCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: TRLAERDTTSFNMLRASFNSMRV*TFPSCS
Trigger: GGAGCAGGATGGAAAAGTCAAAACCCTCATGGAATT...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCAAATGGATAAGCAGTTaGTTGAGAAGCCTGAGAGCC +
Preference number: 3 (lower is better)
Translates to: TRLAERDTTSFNMLRASFKWISS*LRSLRA
Trigger: GGCTCTCAGGCTTCTCAACAAACTGCTTATCCATTT...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp CTCAGAATCCAGTGCTCACCATATTTCCCATTGGTTTaGCCTGTGCTAGAAGTTGGTATGATTGCACCATGC +
Preference number: 3 (lower is better)
Translates to: LRIQCSPYFPLV*PVLEVGMIAPC
Trigger: GCATGGTGCAATCATACCAACTTCTAGCACAGGCCAAACCAATGGGAAATATGGTGAGCACTGGATTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTTTGTACACCTATTCTaGTATAACAACAGTGCATGG +
Preference number: 3 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMFVHLF*YNNSAW
Trigger: CCATGCACTGTTGTTATACAAGAATAGGTGTACAAA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTCGTAAGGCAAGAGGCTaGGTTCGCTATTCACCCCAC +
Preference number: 3 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSRKARG*VRYSPH
Trigger: GTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTACG...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp AGAAAAACAGAGGACAGTAAGATAGGATGTAAAGTGTaGTGTATCTCTGGACACCATCCCTCTCTGCCTGCC +
Preference number: 3 (lower is better)
Translates to: RKTEDSKIGCKV*CISGHHPSLPA
Trigger: GGCAGGCAGAGAGGGATGGTGTCCAGAGATACATCACACTTTACATCCTATCTTACTGTCCTCTGTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR TCA 72 bp CAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTaGGGATACTTTCCAGTTGGGCAAGTTCCTCTGACA +
Preference number: 3 (lower is better)
Translates to: QFLRFRKRTQLL*GYFPVGQVPLT
Trigger: TGTCAGAGGAACTTGCCCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp GGATCTCCCAGCATAGTGTCGAGAAGAACAGGAAAGTaGTGTTTGCAGAGCAACTTCACTAAGATGATGTTC +
Preference number: 3 (lower is better)
Translates to: GSPSIVSRRTGK*CLQSNFTKMMF
Trigger: GAACATCATCTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTGTTCTTCTCGACACTATGCTGGGAGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp AAGAAGCTCAATCACAAATCCCTGTGCATCTTCTCCTaGATCCCCTACAGTTTCTACAAGTCTGGAGAGAAC +
Preference number: 3 (lower is better)
Translates to: KKLNHKSLCIFS*IPYSFYKSGEN
Trigger: GTTCTCTCCAGACTTGTAGAAACTGTAGGGGATCCAGGAGAAGATGCACAGGGATTTGTGATTGAGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp TCCTCTGTTGTGATGCTGCCAGTGGAATCTTCAGACTaGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCA +
Preference number: 3 (lower is better)
Translates to: SSVVMLPVESSD*RSKSGWSGIVS
Trigger: TGAAACAATACCAGACCATCCTGACTTACTTCTCCAGTCTGAAGATTCCACTGGCAGCATCACAACAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAAATTATTTTCAGGTTTTaGGGCCAGCCATCTGCAAGT +
Preference number: 3 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKIIFRF*GQPSAS
Trigger: ACTTGCAGATGGCTGGCCCAAAAACCTGAAAATAAT...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTGGACTTGTGCTTAGATaGAGTTGTCCAGTGCTTTTC +
Preference number: 3 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCGLVLR*SCPVLF
Trigger: GAAAAGCACTGGACAACTCAATCTAAGCACAAGTCC...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp TGGAAATGTTTAACTGTGGTCAGCAGTCCAATGGTGTaGACAGTGCCTTCAATTAATGCACTTGAGCATACG +
Preference number: 3 (lower is better)
Translates to: WKCLTVVSSPMV*TVPSINALEHT
Trigger: CGTATGCTCAAGTGCATTAATTGAAGGCACTGTGCACACCATTGGACTGCTGACCACAGTTAAACATTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATTCTTCACGCAGTTATaGTGGGAGATATTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQFFTQL*WEILAA
Trigger: AGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGGTCATATACATCAGATaGTTCAAAACCATTGCAGTG +
Preference number: 3 (lower is better)
Translates to: GSVVDCTSYIPFSLREERVIYIR*FKTIAV
Trigger: CACTGCAATGGTTTTGAACAATCTGATGTATATGAC...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGGAGCTACCATTGTATaGCTACTGGAAGTAGTTCCT +
Preference number: 3 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEGATIV*LLEVVP
Trigger: AGGAACTACTTCCAGTAGCAATACAATGGTAGCTCC...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTGGCTTATTATCAGGATaGCCATCTGTGGGAGCTACC +
Preference number: 3 (lower is better)
Translates to: CEMAALLFPKLILEEVELGLLSG*PSVGAT
Trigger: GGTAGCTCCCACAGATGGCAATCCTGATAATAAGCC...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp GTAATGAATTCCATGAGGGTTTTGACTTTTCCATCCTaGTCCACTGAGATGTCAACCTCATTGAGGATAGTG +
Preference number: 3 (lower is better)
Translates to: VMNSMRVLTFPS*STEMSTSLRIV
Trigger: CACTATCCTCAATGAGGTTGACATCTCAGTGGAGCAGGATGGAAAAGTCAAAACCCTCATGGAATTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp GGAATACGTGTGTGTACTGTACAAACTCATCATGTGTaGCAGATTGACAAGTGTTGGGCATTTTTCTTCTGC +
Preference number: 3 (lower is better)
Translates to: GIRVCTVQTHHV*QIDKCWAFFFC
Trigger: GCAGAAGAAAAATGCCCAACACTTGTCAATCTGGCACACATGATGAGTTTGTACAGTACACACACGTATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATTTTGCAAACGAGTCTaGATGCGTATAGCTGACTGC +
Preference number: 3 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTFCKRV*MRIADC
Trigger: GCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCGATGGAGTGTCCCCTTaGTCAATACTGTCCAGTGAG +
Preference number: 3 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIDGVSP*SILSSE
Trigger: CTCACTGGACAGTATTGACAAAGGGGACACTCCATC...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAGTTCCTCTGACATGTaGATGACCTCTGCTTCATTT +
Preference number: 3 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQSSSDM*MTSASF
Trigger: AAATGAAGCAGAGGTCATCAACATGTCAGAGGAACT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp CAGTGTTTCAGCATCCACAAAGACTGTTGGGCATTCTaGACACAGCATCATCACTTCCAAGGAACTTTTAAA +
Preference number: 3 (lower is better)
Translates to: QCFSIHKDCWAF*TQHHHFQGTFK
Trigger: TTTAAAAGTTCCTTGGAAGTGATGATGCTGTGTTCAGAATGCCCAACAGTCTTTGTGGATGCTGAAACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp TATCCAGGTGTTCTTGCAACTCCAAAACACCAAACTTaGGTGTTTCCAGCAAACCACATGACATCAGTGTTT +
Preference number: 3 (lower is better)
Translates to: YPGVLATPKHQT*VFPANHMTSVF
Trigger: AAACACTGATGTCATGTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp TTCCAGATTAAGTTCCATCAGTTTGTAGTTGGCTTCTaGCATGTCCAGGTTAGAGCCTATAACTGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: FQIKFHQFVVGF*HVQVRAYNCKA
Trigger: AGCTTTGCAGTTATAGGCTCTAACCTGGACATGTCAGAAGCCAACTACAAACTGATGGAACTTAATCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp GTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGTaGACGGTCATTTCTTGTGTAGATGCTGAGGTAAAA +
Preference number: 3 (lower is better)
Translates to: VCLETEMSLLRR*TVISCVDAEVK
Trigger: TTTTACCTCAGCATCTACACAAGAAATGACCGTGCACCTCCTCAGTAAACTCATTTCTGTCTCCAAACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp GCTTCTCTTTTCACATTGTATGTATCCAGGTGTTCTTaGAACTCCAAAACACCAAACTTGAGTGTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: ASLFTLYVSRCS*NSKTPNLSVSS
Trigger: GCTGGAAACACTCAAGTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACATACAATGTGAAAAGAGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp ATATACAATGACCTTCTTCACGTAAGGCAAGAGGCTTaGTTCGCTATTCACCCCACAAATGCTGATCAAAAA +
Preference number: 3 (lower is better)
Translates to: IYNDLLHVRQEA*FAIHPTNADQK
Trigger: TTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTACGTGAAGAAGGTCATTGTATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGATTGTTCAAAACCATaGCAGTGGCTTGTGGAGATC +
Preference number: 3 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLADCSKP*QWLVEI
Trigger: GATCTCCACAAGCCACTGCAATGGTTTTGAACAATC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGGCTCATTAAACTCCTaGTTCCTGAGAAGGACAGAA +
Preference number: 3 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAGSLNS*FLRRTE
Trigger: TTCTGTCCTTCTCAGGAACAAGGAGTTTAATGAGCC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATTGGTTGTTTCAGTATaGGAGGCCATTATTGCAAAC +
Preference number: 3 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTLVVSV*EAIIAN
Trigger: GTTTGCAATAATGGCCTCCAATACTGAAACAACCAA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACTTTCAAATCAGGAGTaGTGGGACTACATTCTTTTT +
Preference number: 3 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQLSNQE*WDYILF
Trigger: AAAAAGAATGTAGTCCCACAACTCCTGATTTGAAAG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR-3UTR CAA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCTGTATCCAGGTGTTCTaGCAACTCCAAAACACCAAA +
Preference number: 3 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLACIQVF*QLQNTK
Trigger: TTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACA...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp GTCACAAGATTAAATGTTGTATCTGAGAAGGAGTCATaGAGGTATCTGCACACGACATTGATCCAGTTAGAA +
Preference number: 3 (lower is better)
Translates to: VTRLNVVSEKES*RYLHTTLIQLE
Trigger: TTCTAACTGGATCAATGTCGTGTGCAGATACCTGCATGACTCCTTCTCAGATACAACATTTAATCTTGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp ACTTCCAAGGAACTTTTAAATTTGGTACCAATGCGTTaGAGACTATCACCAAGAAAGCTGACTGCCTCATTA +
Preference number: 3 (lower is better)
Translates to: TSKELLNLVPMR*RLSPRKLTASL
Trigger: TAATGAGGCAGTCAGCTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAATTTAAAAGTTCCTTGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp GTTGTGCATCTGTGTTTATCCTATACATGTCTTCTTTaGCACCAAATGTCCTCTTACAATCATCTAGCCACT +
Preference number: 3 (lower is better)
Translates to: VVHLCLSYTCLL*HQMSSYNHLAT
Trigger: AGTGGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAAACACAGATGCACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTCTTCACGCAGTTATaGTGGGAGATATTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKFFTQL*WEILAA
Trigger: AGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCATTTCACCTGCTTTaGGTTGTTTCAGTATTGGAG +
Preference number: 3 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSSFHLL*VVSVLE
Trigger: CTCCAATACTGAAACAACCAAAAGCAGGTGAAATGA...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTCATTTCACCTGCTTTaGGTTGTTTCAGTATTGGAG +
Preference number: 3 (lower is better)
Translates to: KINGFCKRVLMRIADCMFSFHLL*VVSVLE
Trigger: CTCCAATACTGAAACAACCAAAAGCAGGTGAAATGA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCCTGTTAGCTGCATACTaGTTTCCCATTATAGGATCA +
Preference number: 3 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLALLAAY*FPIIGS
Trigger: TGATCCTATAATGGGAAACAAGTATGCAGCTAACAG...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR-3UTR CAA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGAGATTCCTGCTGTTCTaGAATTATATAGGATCCTTC +
Preference number: 3 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLRFLLF*NYIGSF
Trigger: GAAGGATCCTATATAATTCAAGAACAGCAGGAATCT...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp GAGACGTTATCACCAAACATCCATACCTTGAAAATATaGCTATCACATATCCATACATCCCAACTCACACAC +
Preference number: 3 (lower is better)
Translates to: ETLSPNIHTLKI*LSHIHTSQLTH
Trigger: GTGTGTGAGTTGGGATGTATGGATATGTGATAGTCATATTTTCAAGGTATGGATGTTTGGTGATAACGTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR TCA 72 bp AGGAACCAAGGCATTAGAATTAGAACCAGAAGAAGTTaGGGAAGTACTTCTAGTGACAGCAATAACTTTTGG +
Preference number: 3 (lower is better)
Translates to: RNQGIRIRTRRS*GSTSSDSNNFW
Trigger: CCAAAAGTTATTGCTGTCACTAGAAGTACTTCCTCAACTTCTTCTGGTTCTAATTCTAATGCCTTGGTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR GCA 72 bp GCAGCTCTTTTCTTGAATTCTGCAGACTTCAAAGCCTaGAAGTCATATATTCCATCATCAATGACCACAATT +
Preference number: 3 (lower is better)
Translates to: AALFLNSADFKA*KSYIPSSMTTI
Trigger: AATTGTGGTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGAGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR CCA 72 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTaGAGGCCATTATTGCAAACATTCTTGGAATTCTTT +
Preference number: 3 (lower is better)
Translates to: QPHFTCFWLFQY*RPLLQTFLEFF
Trigger: AAAGAATTCCAAGAATGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTATTGGAGGCCATTATaGCAAACATTCTTGGAATTC +
Preference number: 3 (lower is better)
Translates to: KINGFCKRVLMRIADCMFYWRPL*QTFLEF
Trigger: GAATTCCAAGAATGTTTGCAATAATGGCCTCCAATA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATATTGGAGGCCATTATaGCAAACATTCTTGGAATTC +
Preference number: 3 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKYWRPL*QTFLEF
Trigger: GAATTCCAAGAATGTTTGCAATAATGGCCTCCAATA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTTGGTTGTTTCAGTATaGGAGGCCATTATTGCAAAC +
Preference number: 3 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYLVVSV*EAIIAN
Trigger: GTTTGCAATAATGGCCTCCAATACTGAAACAACCAA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATCATTTCACCTGCTTTaGGTTGTTTCAGTATTGGAG +
Preference number: 3 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSFHLL*VVSVLE
Trigger: CTCCAATACTGAAACAACCAAAAGCAGGTGAAATGA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTATTGGAGGCCATTATaGCAAACATTCTTGGAATTC +
Preference number: 3 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYYWRPL*QTFLEF
Trigger: GAATTCCAAGAATGTTTGCAATAATGGCCTCCAATA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR GCA 72 bp ATCATAATGCTTCATGGTTTCAGCCAAAGTATCAATTaGAGATTCCAATGTGAGAAGAAGCTCAATCACAAA +
Preference number: 3 (lower is better)
Translates to: IIMLHGFSQSIN*RFQCEKKLNHK
Trigger: TTTGTGATTGAGCTTCTTCTCACATTGGAATCTGCAATTGATACTTTGGCTGAAACCATGAAGCATTATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CCA 72 bp TTTATGTCTTCTGTTGTAGAAATTAGGCTAGTCTGTTaGTCACCGACTTCCAAATCCTCATTAGAAGAAAAT +
Preference number: 3 (lower is better)
Translates to: FMSSVVEIRLVC*SPTSKSSLEEN
Trigger: ATTTTCTTCTAATGAGGATTTGGAAGTCGGTGACCAACAGACTAGCCTAATTTCTACAACAGAAGACATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR TCA 72 bp AGACTCCAGTTCATGTTATACTACAGACTTAGACAGTaGATAAGTATATTGCATGTTTTGGTAGTCAGTCTT +
Preference number: 3 (lower is better)
Translates to: RLQFMLYYRLRQ*ISILHVLVVSL
Trigger: AAGACTGACTACCAAAACATGCAATATACTTATTCACTGTCTAAGTCTGTAGTATAACATGAACTGGAGTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR CAA 72 bp GAGCACTGGTACTCCTGGAGGGATGGAGTGTCCCCTTaGTCAATACTGTCCAGTGAGCGCCTGCGAACTCCC +
Preference number: 4 (lower is better)
Translates to: EHWYSWRDGVSP*SILSSERLRTP
Trigger: GGGAGTTCGCAGGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp GCAGCCTCCAGCTGGTGGGAAGGGCAGTGGCTCTCCTaGGTTATGCTCCATCACTTTCAGTCGCCAATTAGA +
Preference number: 4 (lower is better)
Translates to: AASSWWEGQWLS*VMLHHFQSPIR
Trigger: TCTAATTGGCGACTGAAAGTGATGGAGCATAACCAAGGAGAGCCACTGCCCTTCCCACCAGCTGGAGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TGTCGCCTTGCTGTGGGGAGAGGTTTTAAGTCCACCAGCTCGATGTTGTTCATCCTGGCTCCGTTCTCTTaGCAATGGCGCGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CRLAVGRGFKSTSSMLFILAPFS*QWRVPF
Trigger: AAAGGGGACGCGCCATTGTCAAGAGAACGGAGCCAG...GATGAACAACATCGAGCTGGTGGACTTAAAACCTCTCCCCACAGCAAGGCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCCAAAGCAGTAGTGAGTaGGTCACCGTGTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAQSSSE*VTVCEA
Trigger: TGCTTCACACACGGTGACTCACTCACTACTGCTTTG...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CACACATTCTCCACCTCCGACCAGGCCAGTTCATCGCCATACTTTGCTGTCATAGGCAGAAAGAAATGGTaGCGGCAGAGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: HTFSTSDQASSSPYFAVIGRKKW*RQRRRL
Trigger: CAGACGTCGCCTCTGCCGTCACCATTTCTTTCTGCC...TATGACAGCAAAGTATGGCGATGAACTGGCCTGGTCGGAGGTGGAGAATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTCATATGCCACGGGCTaGAAGGCGGCTATGATGGCA +
Preference number: 4 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMSYATG*KAAMMA
Trigger: TGCCATCATAGCCGCCTTTCAGCCCGTGGCATATGA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCTCAAAACCATTGCAGTaGCTTGTGGAGATCCCCATC +
Preference number: 4 (lower is better)
Translates to: GTPGGMECPLCQYCPVSASKPLQ*LVEIPI
Trigger: GATGGGGATCTCCACAAGCCACTGCAATGGTTTTGA...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCGCTTATTATCAGGATTaGCATCTGTGGGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAAYYQD*HLWELP
Trigger: TGGTAGCTCCCACAGATGGCAATCCTGATAATAAGC...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCATTAGGCTAGTCTGTTaGTCACCGACTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAIRLVC*SPTSKS
Trigger: GGATTTGGAAGTCGGTGACCAACAGACTAGCCTAAT...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAGTGCTTAAACAAGGATaGAGGGGATGGGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: GLICILLIGEVQAGGATRVLKQG*RGWDAN
Trigger: ATTGGCATCCCATCCCCTTCATCCTTGTTTAAGCAC...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTCACAGCCCAGCTGGTaGACCTTTTTGTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMSQPSW*TFLSRE
Trigger: TTCTCTGGACAAAAAGGTTCACCAGCTGGGCTGTGA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACCGCCCTCGGGCCCCTaGCTCCGTTCTCTTGACAAT +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQPPSGP*LRSLDN
Trigger: ATTGTCAAGAGAACGGAGCCAGGGGCCCGAGGGCGG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGAGCCATCTGCAAGTGTaGTCCACACATTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMSHLQV*STHSPP
Trigger: AGGTGGAGAATGTGTGGACCACACTTGCAGATGGCT...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp TCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCACAGGCAGCCTCCAGCTGGTaGGAAGGGCAGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSHLSSSSFRAKVTSSSQAASSW*EGQWLS
Trigger: GGAGAGCCACTGCCCTTCCCACCAGCTGGAGGCTGC...CTGTGAAGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAAGAAGCCTCCAAAGTTaGGGTCTCATCCCTGATTTG +
Preference number: 4 (lower is better)
Translates to: GLICILLIGEVQAGGATRRSLQS*GLIPDL
Trigger: CAAATCAGGGATGAGACCCCAACTTTGGAGGCTTCT...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAAACAGGATCGGTCAGCTaGAGCTCACTCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKTGSVS*SSLTSS
Trigger: AGAGCTGGTGAGTGAGCTTCAGCTGACCGATCCTGT...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACCATGTGAGTGACCCCTaGACTGACAGGATCGGTCAG +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYHVSDP*TDRIGQ
Trigger: CTGACCGATCCTGTCAGTTCAGGGGTCACTCACATG...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCATGTGAGTGACCCCTaGACTGACAGGATCGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAHVSDP*TDRIGQ
Trigger: CTGACCGATCCTGTCAGTTCAGGGGTCACTCACATG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCTTGAACAGCAAATTCTaGAAAGAGGCTCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: GTPGGMECPLCQYCPVSALNSKF*KEALDD
Trigger: GTCATCAAGAGCCTCTTTGCAGAATTTGCTGTTCAA...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCCAGAACCTGCAGATGTaGAAGATGACGATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QKQAFTMFIHLRVAVVKPQNLQM*KMTMLL
Trigger: CAGCAACATCGTCATCTTCCACATCTGCAGGTTCTG...GGGTTTGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGCAGCCTCCAGCTGGTaGGAAGGGCAGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVAASSW*EGQWLS
Trigger: GGAGAGCCACTGCCCTTCCCACCAGCTGGAGGCTGC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCTGTGCAGATGTGAAATaGCAGCACTGTTATTTCCTA +
Preference number: 4 (lower is better)
Translates to: GTPGGMECPLCQYCPVSACADVK*QHCYFL
Trigger: TAGGAAATAACAGTGCTGCCATTTCACATCTGCACA...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGACGACGTCTGTACTTCTaGAAAACCATCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLICILLIGEVQAGGATRRRLYF*KTILLF
Trigger: GAAGAGCAAGATGGTTTTCCAGAAGTACAGACGTCG...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGCCACCACTTGCACTGTaGCTAATGACACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERPPLAL*LMTPAS
Trigger: AGATGCTGGTGTCATTAGTCACAGTGCAAGTGGTGG...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAAGGGGGATTATCCATGTaGGTGACCCCTGAACTGACA +
Preference number: 4 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKGGLSM*VTPELT
Trigger: TGTCAGTTCAGGGGTCACTCACATGGATAATCCCCC...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CACACATTCTCCACCTCCGACCAGGCCAGTTCATCGCCATACTTTGCTGTCATAAGTGGTGTGCAGATGTaGAATGGCAGCACTGTTATT +
Preference number: 4 (lower is better)
Translates to: HTFSTSDQASSSPYFAVISGVQM*NGSTVI
Trigger: AATAACAGTGCTGCCATTTCACATCTGCACACCACT...TATGACAGCAAAGTATGGCGATGAACTGGCCTGGTCGGAGGTGGAGAATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCGCTGCTTTAGGGCCCTaGAAATCTGAAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: TRLAERDTTSFNMLRASFAALGP*KSERIS
Trigger: GGAGATCCTTTCAGATTTTCAGGGCCCTAAAGCAGC...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGGCACTTCCTCTGTTGTaGTGCTGCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERALPLL*CCQWNL
Trigger: AAGATTCCACTGGCAGCATCACAACAGAGGAAGTGC...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGATCCTCTTCACAGACTaGCTCGGGGTAACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERILFTD*LGVTFR
Trigger: CCTGAAAGTTACCCCGAGTCAGTCTGTGAAGAGGAT...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGCAGACAGCATCTGATTaGCGTGGCAGCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEQTASD*RGSARL
Trigger: AAGCCTGGCGCTGCCACGTCAATCAGATGCTGTCTG...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACAGACAGCATCTGATTaGCGTGGCAGCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQQTASD*RGSARL
Trigger: AAGCCTGGCGCTGCCACGTCAATCAGATGCTGTCTG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCTTCCAGCAAACCACATaGCATCAGTGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: QKQAFTMFIHLRVAVVKPFQQTT*HQCFSI
Trigger: GATGCTGAAACACTGATGTCATGTGGTTTGCTGGAA...GGGTTTGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TGTCGCCTTGCTGTGGGGAGAGGTTTTAAGTCCACCAGCTCGATGTTGTTCATCCAATCAGGTCAGTTCTaGTCATACCGTCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: CRLAVGRGFKSTSSMLFIQSGQF*SYRQES
Trigger: TGATTCCTGACGGTATGAGCAGAACTGACCTGATTG...GATGAACAACATCGAGCTGGTGGACTTAAAACCTCTCCCCACAGCAAGGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TGTCGCCTTGCTGTGGGGAGAGGTTTTAAGTCCACCAGCTCGATGTTGTTCATCACGATGTTGCTGCACTaGAGCAAAGGATCAGATAGT +
Preference number: 4 (lower is better)
Translates to: CRLAVGRGFKSTSSMLFITMLLH*SKGSDS
Trigger: ACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGT...GATGAACAACATCGAGCTGGTGGACTTAAAACCTCTCCCCACAGCAAGGCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGCTCGAGTGGGCACACTaGTACAAAGCAGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERLEWAH*YKAVVS
Trigger: ACTCACTACTGCTTTGTACCAGTGTGCCCACTCGAG...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACTTCCCTAAAAGCTCCTaGGTTGGTCCTGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYFPKSS*VGPAKT
Trigger: GGTCTTGGCAGGACCAACCCAGGAGCTTTTAGGGAA...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCATTGCAGTGGCTTGTaGAGATCCCCATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAHCSGL*RSPSFS
Trigger: GGAGAAGGATGGGGATCTCCACAAGCCACTGCAATG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGCAGCCTCCAGCTGGTaGGAAGGGCAGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYAASSW*EGQWLS
Trigger: GGAGAGCCACTGCCCTTCCCACCAGCTGGAGGCTGC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCGTGGAATCTTCAGACTaGAGAAGTAAGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: QKQAFTMFIHLRVAVVKPVESSD*RSKSGW
Trigger: CCATCCTGACTTACTTCTCCAGTCTGAAGATTCCAC...GGGTTTGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CACACATTCTCCACCTCCGACCAGGCCAGTTCATCGCCATACTTTGCTGTCATATTCTTCCTTACAGCCTaGAACTTTGATTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: HTFSTSDQASSSPYFAVIFFLTA*NFDWAR
Trigger: TCTTGCCCAATCAAAGTTTCAGGCTGTAAGGAAGAA...TATGACAGCAAAGTATGGCGATGAACTGGCCTGGTCGGAGGTGGAGAATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGAGGAACCACACTTCGTaGGCCTTTTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERRNHTS*AFWKKC
Trigger: GCACTTTTTCCAAAAGGCTCACGAAGTGTGGTTCCT...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTTTTATAGCTGGAAGTaGTGCGATAATACGGGGGAT +
Preference number: 4 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMFYSWK*CDNTGD
Trigger: ATCCCCCGTATTATCGCATCACTTCCAGCTATAAAA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGTAATCCACCAGTGGTaGCCAGCAGCCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAVIHQW*PAASSW
Trigger: CCAGCTGGAGGCTGCTGGTCACCACTGGTGGATTAC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGCTGAAAGGCGGCTATaGTGGCAGAAAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAAERRL*WQKEMV
Trigger: CACCATTTCTTTCTGCCATCATAGCCGCCTTTCAGC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGGACTGTTGGGCATTCTaGACACAGCATCATCACTTC +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERDCWAF*TQHHHF
Trigger: GAAGTGATGATGCTGTGTTCAGAATGCCCAACAGTC...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp CAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCATTGTTCAAAACCATTaGAGTGGCTTGTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: QKQAFTMFIHLRVAVVKPIVQNH*SGLWRS
Trigger: GGATCTCCACAAGCCACTGCAATGGTTTTGAACAAT...GGGTTTGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTCAGGAAAGTGCTGTTTaGAGAGCAACTTCACTAAGA +
Preference number: 4 (lower is better)
Translates to: WFIRPSIISSVLLRRRSPQESAV*RATSLR
Trigger: TCTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTG...AGGTGACCGGCGGCGGAGTAACACACTGGATATAATGGATGGACGGATAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGTTGCAGTGAGAGGCTaGTTTAGGGCCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAVAVRG*FRALKI
Trigger: GATTTTCAGGGCCCTAAAGCAGCCTCTCACTGCAAC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATCTCCAGATTAAACTaGTTGGCTGGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAISRLN*LAGAAD
Trigger: GTCTGCAGCCCCAGCCAAGCAGTTTAATCTGGAGAT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTGCTATAGCCGCTATCTaGGGTAGACGCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: EMSISSFSEADSASLRILAIAAI*GRRQRL
Trigger: GAGACGCTGGCGTCTACCCCAGATAGCGGCTATAGC...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGGTAGAGGAGACAGCTaGCTGAGTACTCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAGRGDS*LSTPSV
Trigger: AACAGATGGAGTACTCAGCCAGCTGTCTCCTCTACC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGGCAGTGGCTCTCCTTaGTTATGCTCCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAGSGSP*LCSITF
Trigger: GAAAGTGATGGAGCATAACCAAGGAGAGCCACTGCC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAATCTTGGGGATATCACTaGGTACGACAAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKSWGYH*VRQDSQ
Trigger: CTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGA...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGAGCACTGGTACTCCTaGAGGGATGGAGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKEHWYS*RDGVSP
Trigger: AGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACGGATCGGGTACAGGATaGACAGGAATCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYGSGTG*TGICFR
Trigger: TCTAAAGCAGATTCCTGTTCATCCTGTACCCGATCC...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGTACAGCCTGAAACTTTaGTTGGGCAAGAACCCCTAT +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERYSLKL*LGKNPY
Trigger: ATAGGGGTTCTTGCCCAATCAAAGTTTCAGGCTGTA...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGTGCCTGCAGAGTATTaGAAGCCAGAGCACGCAGTT +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQVPAEY*KPEHAV
Trigger: AACTGCGTGCTCTGGCTTTCAATACTCTGCAGGCAC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACGACTGCTACAGAGAATaGCAAGCGCAAAGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYDCYRE*QAQSLQ
Trigger: TTGAAGGCTTTGCGCTTGTCATTCTCTGTAGCAGTC...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAACAGGATCGGTCAGCTaGAGCTCACTCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKTGSVS*SSLTSS
Trigger: AGAGCTGGTGAGTGAGCTTCAGCTGACCGATCCTGT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR TCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGTAATCCACCAGTGGTaGCCAGCAGCCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIVIHQW*PAASSW
Trigger: CCAGCTGGAGGCTGCTGGTCACCACTGGTGGATTAC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGTAATCCACCAGTGGTaGCCAGCAGCCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVVIHQW*PAASSW
Trigger: CCAGCTGGAGGCTGCTGGTCACCACTGGTGGATTAC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGTAATCCACCAGTGGTaGCCAGCAGCCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYVIHQW*PAASSW
Trigger: CCAGCTGGAGGCTGCTGGTCACCACTGGTGGATTAC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAGTGCAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCACTTCTCTCGACTCTCTaGTTTATCCAAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: KCRSRRLQCSYTSGWQWSLLSTL*FIQRQM
Trigger: CATTTGCCTTTGGATAAATCAGAGAGTCGAGAGAAG...TGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTGCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGTCAATACTGTCCAGTaGGCGCCTGCGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFVNTVQ*APANSP
Trigger: TGGGGAGTTCGCAGGCGCTCACTGGACAGTATTGAC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACGTCTCATCCCTGATTTaGAGCACTTCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYVSSLI*STSSVV
Trigger: CACAACAGAGGAAGTGCTTCAAATCAGGGATGAGAC...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CACACATTCTCCACCTCCGACCAGGCCAGTTCATCGCCATACTTTGCTGTCATAAAATCAAGAATTCCTTaGCACACAAGAGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: HTFSTSDQASSSPYFAVIKSRIP*HTRDSC
Trigger: GCAGGAATCTCTTGTGTGTCAAGGAATTCTTGATTT...TATGACAGCAAAGTATGGCGATGAACTGGCCTGGTCGGAGGTGGAGAATGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGGCAGAAAGAAATGGTaGCGGCAGAGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFGRKKW*RQRRRL
Trigger: CAGACGTCGCCTCTGCCGTCACCATTTCTTTCTGCC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCAGACAGCATCTGATTaGCGTGGCAGCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFQTASD*RGSARL
Trigger: AAGCCTGGCGCTGCCACGTCAATCAGATGCTGTCTG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATCAGACAGCATCTGATTaGCGTGGCAGCGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNQTASD*RGSARL
Trigger: AAGCCTGGCGCTGCCACGTCAATCAGATGCTGTCTG...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCTCTTTCCTAAAGGCCTaGAGTGTCTCAGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: TRLAERDTTSFNMLRASFSFLKA*SVSESS
Trigger: ACTGGATTCTGAGACACTTCAGGCCTTTAGGAAAGA...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGAAGTCCTACATTATCTaGAACAGGGCCACAACACAG +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERKSYII*NRATTQ
Trigger: CTGTGTTGTGGCCCTGTTGCAGATAATGTAGGACTT...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp CGTAACCAGCGCCTACTAGTCACCATAAGTTCTCGGTCTTTTAAGGAATCATCTGGCTCTCCTTGGTTATaGTCCATCACTTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: RNQRLLVTISSRSFKESSGSPWL*SITFSR
Trigger: GCGACTGAAAGTGATGGAGCATAACCAAGGAGAGCC...AGATGATTCCTTAAAAGACCGAGAACTTATGGTGACTAGTAGGCGCTGGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGGCTCAGTAGTGGACTaGACGTCATACATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAGSVVD*TSYIPF
Trigger: GAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCTCTGAGAAGGAGTCATaGAGGTATCTGCACACGACA +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEASEKES*RYLHTT
Trigger: TGTCGTGTGCAGATACCTGCATGACTCCTTCTCAGA...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCTGCTTGGCTGGGGCTaGAGACAGGTCAATATGACT +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCLLGWG*RQVNMT
Trigger: AGTCATATTGACCTGTCTGCAGCCCCAGCCAAGCAG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCTCTTCATCATCATATaGCACGGGCTGAAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCLFIII*HGLKGG
Trigger: GCCGCCTTTCAGCCCGTGGCATATGATGATGAAGAG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGTTAGAGCCTATAACTaGAAAGCTTCCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAVRAYN*KASCLA
Trigger: GGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAAC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGACACCATCCCTCTCTaGCTGCCCCACACCCAAAAG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFDTIPL*LPHTQK
Trigger: CTTTTGGGTGTGGGGCAGGCAGAGAGGGATGGTGTC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGACACCATCCCTCTCTaGCTGCCCCACACCCAAAAG +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVDTIPL*LPHTQK
Trigger: CTTTTGGGTGTGGGGCAGGCAGAGAGGGATGGTGTC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCTCTTCCGTTCCATTTTaGCGTCTGTACCAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: TRLAERDTTSFNMLRASFSSVPF*RLYQSN
Trigger: GTTTGACTGGTACAGACGCCAAAATGGAACGGAAGA...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp TGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTTGTCCATCACATCTATaGCTAATTCATCATCACCCT +
Preference number: 4 (lower is better)
Translates to: WFIRPSIISSVLLRRRSPCPSHL*LIHHHP
Trigger: AGGGTGATGATGAATTAGCCATAGATGTGATGGACA...AGGTGACCGGCGGCGGAGTAACACACTGGATATAATGGATGGACGGATAAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCATGGGTCTTGGCCTTaGGTCACATGTGCAAATATC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAHGSWP*VTCANI
Trigger: GATATTTGCACATGTGACCCAAGGCCAAGACCCATG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGCTATAGCCGCTATCTaGGGTAGACGCCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVAIAAI*GRRQRL
Trigger: GAGACGCTGGCGTCTACCCCAGATAGCGGCTATAGC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTGTAAGGCAAGAGGCTTaGTTCGCTATTCACCCCACA +
Preference number: 4 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCVRQEA*FAIHPT
Trigger: TGTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTAC...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCTGTGCATCTTCTCCTaGATCCCCTACAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEALCIFS*IPYSFY
Trigger: GTAGAAACTGTAGGGGATCCAGGAGAAGATGCACAG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR CAA 72 bp TTATCAGGATTGCCATCTGTGGGAGCTACCATTGTATaGCTACTGGAAGTAGTTCCTGAGGTGACAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSGLPSVGATIV*LLEVVPEVTEG
Trigger: CCCTTCTGTCACCTCAGGAACTACTTCCAGTAGCAATACAATGGTAGCTCCCACAGATGGCAATCCTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATCTGGCTCCGTTCTCTTaGCAATGGCGCGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYLAPFS*QWRVPF
Trigger: AAAGGGGACGCGCCATTGTCAAGAGAACGGAGCCAG...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACGTGAGTCACCGTGTGTaGAGCAGAATATGGAATGTT +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYVSHRV*SRIWNV
Trigger: AACATTCCATATTCTGCTTCACACACGGTGACTCAC...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGATTTATTTACTTTGCTaGCTGGCGCTGAAGCGTATC +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERIYLLC*LALKRI
Trigger: GATACGCTTCAGCGCCAGTCAGCAAAGTAAATAAAT...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCACAGGTGCCTGCAGAGTATTaGAAGCCAGAGCACGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSHLSSSSFRAKVTSSSQVPAEY*KPEHAV
Trigger: AACTGCGTGCTCTGGCTTTCAATACTCTGCAGGCAC...CTGTGAAGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACACAGGATCGGTCAGCTaGAGCTCACTCACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDTGSVS*SSLTSS
Trigger: AGAGCTGGTGAGTGAGCTTCAGCTGACCGATCCTGT...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGCTATGTTACACCTGTaGAGAGGTAATCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAAMLHL*RGNPGD
Trigger: ATCACCTGGATTACCTCTTCACAGGTGTAACATAGC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCGCTGCTTTAGGGCCCTaGAAATCTGAAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCAALGP*KSERIS
Trigger: GGAGATCCTTTCAGATTTTCAGGGCCCTAAAGCAGC...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACCAGCCGCACTGTGCTaGTCACCATATTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQPAALC*SPYLFP
Trigger: TGGAAACAAATATGGTGATCAGCACAGTGCGGCTGG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTCCAGCCGCACTGTGCTaGTCACCATATTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: YTSDCSKPLQWLVEIPILPAALC*SPYLFP
Trigger: TGGAAACAAATATGGTGATCAGCACAGTGCGGCTGG...AAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GGCTCAGTAGTGGACTGCACGTCATACATTCCTTTCTCTCTTAGAGAGGAAAGGAGAACCAGAAGAAGTTaGGGAAGTACTTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GSVVDCTSYIPFSLREERRTRRS*GSTSSD
Trigger: GTCACTAGAAGTACTTCCTCAACTTCTTCTGGTTCT...CCTTTCCTCTCTAAGAGAGAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGTCAATACTGTCCAGTaGGCGCCTGCGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLVNTVQ*APANSP
Trigger: TGGGGAGTTCGCAGGCGCTCACTGGACAGTATTGAC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGTCAATACTGTCCAGTaGGCGCCTGCGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVVNTVQ*APANSP
Trigger: TGGGGAGTTCGCAGGCGCTCACTGGACAGTATTGAC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGGCAGAAAGAAATGGTaGCGGCAGAGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYGRKKW*RQRRRL
Trigger: CAGACGTCGCCTCTGCCGTCACCATTTCTTTCTGCC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGGCAGAAAGAAATGGTaGCGGCAGAGGCGACGTCTG +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVGRKKW*RQRRRL
Trigger: CAGACGTCGCCTCTGCCGTCACCATTTCTTTCTGCC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGCTGAAAGGCGGCTATaGTGGCAGAAAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQAERRL*WQKEMV
Trigger: CACCATTTCTTTCTGCCATCATAGCCGCCTTTCAGC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATCATATGCCACGGGCTaGAAGGCGGCTATGATGGCA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVSYATG*KAAMMA
Trigger: TGCCATCATAGCCGCCTTTCAGCCCGTGGCATATGA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTCATATGCCACGGGCTaGAAGGCGGCTATGATGGCA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTASYATG*KAAMMA
Trigger: TGCCATCATAGCCGCCTTTCAGCCCGTGGCATATGA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGTGTCAGACAGCATCTaGTTGACGTGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLVSDSI*LTWQRQ
Trigger: CTGGCGCTGCCACGTCAATCAGATGCTGTCTGACAC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGTGTCAGACAGCATCTaGTTGACGTGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYVSDSI*LTWQRQ
Trigger: CTGGCGCTGCCACGTCAATCAGATGCTGTCTGACAC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATTGGGCAAGTTCCTCTaGCATGTTGATGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQLGKFL*HVDDLC
Trigger: GCAGAGGTCATCAACATGTCAGAGGAACTTGCCCAA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCGGACTCAGCTTCTTTaGGGATACTTTCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCRTQLL*GYFPVG
Trigger: CCCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCTATAAAGCCAATGAATaGTTCTTTCTCGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: QKQAFTMFIHLRVAVVKPYKANE*FFLELS
Trigger: ACTGAGCTCGAGAAAGAAGCATTCATTGGCTTTATA...GGGTTTGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACTCCTGGGTTGGTCCTaGCAAGACCTAGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVLLGWS*QDLEQG
Trigger: CCCTTGTTCTAGGTCTTGGCAGGACCAACCCAGGAG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCAAGATCCTCCAGAGCTaGTACTGTATCGGGATTCTA +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAKILQS*YCIGIL
Trigger: TAGAATCCCGATACAGTAGCAGCTCTGGAGGATCTT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGGCTCTCCTTGGTTATaGTCCATCACTTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQGSPWL*SITFSR
Trigger: GCGACTGAAAGTGATGGAGCATAACCAAGGAGAGCC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACTTGAGGATAGTGGTGTaGAGATGTGAAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYLRIVV*RCEMAA
Trigger: TGCTGCCATTTCACATCTGCACACCACTATCCTCAA...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp CGTAACCAGCGCCTACTAGTCACCATAAGTTCTCGGTCTTTTAAGGAATCATCTTCTGAGAAGGAGTCATaGAGGTATCTGCACACGACA +
Preference number: 4 (lower is better)
Translates to: RNQRLLVTISSRSFKESSSEKES*RYLHTT
Trigger: TGTCGTGTGCAGATACCTGCATGACTCCTTCTCAGA...AGATGATTCCTTAAAAGACCGAGAACTTATGGTGACTAGTAGGCGCTGGTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACTGGCTTGCTGTAAGTaGCGCTTCTTCTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKLACCK*RFFFRG
Trigger: TCCTCGGAAGAAGAAGCGGCACTTACAGCAAGCCAG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACTCTTCATCATCATATaGCACGGGCTGAAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTLFIII*HGLKGG
Trigger: GCCGCCTTTCAGCCCGTGGCATATGATGATGAAGAG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGAACACTAAAAAGTAGATaGTGCCAGAAAGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: GLICILLIGEVQAGGATRTLKSR*CQKVIS
Trigger: ACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGT...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGTAAGGCAAGAGGCTTaGTTCGCTATTCACCCCACA +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQVRQEA*FAIHPT
Trigger: TGTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTAC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGGCAGTGGCTCTCCTTaGTTATGCTCCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQGSGSP*LCSITF
Trigger: GAAAGTGATGGAGCATAACCAAGGAGAGCCACTGCC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGAGCACTGGTACTCCTaGAGGGATGGAGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLEHWYS*RDGVSP
Trigger: AGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGAGCACTGGTACTCCTaGAGGGATGGAGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVEHWYS*RDGVSP
Trigger: AGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGAGCACTGGTACTCCTaGAGGGATGGAGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGEHWYS*RDGVSP
Trigger: AGGGGACACTCCATCCCTCCAGGAGTACCAGTGCTC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTGTGCGTGAGAGTATCTaGCTTGCTGTAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: EMSISSFSEADSASLRILVRESI*LAVSAA
Trigger: AGCGGCACTTACAGCAAGCCAGATACTCTCACGCAC...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp GTCCAATGGTGTGCACAGTGCCTTCAATTAATGCACTaGAGCATACGTAATTACATTTCTGGCAGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VQWCAQCLQLMH*SIRNYISGRVH
Trigger: GTGGACCCTGCCAGAAATGTAATTACGTATGCTCAAGTGCATTAATTGAAGGCACTGTGCACACCATTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR CAA 72 bp ACTTTGCTGTCATATACATCAGATTGTTCAAAACCATaGCAGTGGCTTGTGGAGATCCCCATCCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TLLSYTSDCSKP*QWLVEIPILLP
Trigger: GGGGAGAAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATATGACAGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp TCTGAGAAGGAGTCATGCAGGTATCTGCACACGACATaGATCCAGTTAGAACAGTCTCTGGAATACGTGTGT +
Preference number: 4 (lower is better)
Translates to: SEKESCRYLHTT*IQLEQSLEYVC
Trigger: ACACACGTATTCCAGAGACTGTTCTAACTGGATCAATGTCGTGTGCAGATACCTGCATGACTCCTTCTCAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACAAAGCAGTAGTGAGTaGGTCACCGTGTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKQSSSE*VTVCEA
Trigger: TGCTTCACACACGGTGACTCACTCACTACTGCTTTG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGACTGCTACAGAGAATaGCAAGCGCAAAGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQDCYRE*QAQSLQ
Trigger: TTGAAGGCTTTGCGCTTGTCATTCTCTGTAGCAGTC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCACAGTGCAGATGTGGAAGATaGCGATGTTGCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: SSHLSSSSFRAKVTSSSQCRCGR*RCCCTA
Trigger: TGCAGTGCAGCAACATCGTCATCTTCCACATCTGCA...CTGTGAAGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACCACCACTTGCACTGTaGCTAATGACACCAGCATCT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKPPLAL*LMTPAS
Trigger: AGATGCTGGTGTCATTAGTCACAGTGCAAGTGGTGG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGGGGGATTATCCATGTaGGTGACCCCTGAACTGACA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVGGLSM*VTPELT
Trigger: TGTCAGTTCAGGGGTCACTCACATGGATAATCCCCC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR TCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTTCCATCCTGCTCCACTaGGATGTCAACCTCATTGAG +
Preference number: 4 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVSILLH*DVNLIE
Trigger: CTCAATGAGGTTGACATCTCAGTGGAGCAGGATGGA...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGCTGCTTTAGGGCCCTaGAAATCTGAAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKAALGP*KSERIS
Trigger: GGAGATCCTTTCAGATTTTCAGGGCCCTAAAGCAGC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCTTCTCTCGACTCTCTaGTTTATCCAAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEALLSTL*FIQRQM
Trigger: CATTTGCCTTTGGATAAATCAGAGAGTCGAGAGAAG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGTTTCTTTGCAAAACTaGGTTGGGCTGTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAVSLQN*VGLSKC
Trigger: GCATTTTGACAGCCCAACTCAGTTTTGCAAAGAAAC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACCAGCCGCACTGTGCTaGTCACCATATTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKPAALC*SPYLFP
Trigger: TGGAAACAAATATGGTGATCAGCACAGTGCGGCTGG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCAGAACCAGAAGAAGTTaGGGAAGTACTTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEARTRRS*GSTSSD
Trigger: GTCACTAGAAGTACTTCCTCAACTTCTTCTGGTTCT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGTCAATACTGTCCAGTaGGCGCCTGCGAACTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYVNTVQ*APANSP
Trigger: TGGGGAGTTCGCAGGCGCTCACTGGACAGTATTGAC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATCATCTGTATCCTCCTaGTTGGTGAGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKSSVSS*LVRFRL
Trigger: CAGCCTGAACCTCACCAATCAGGAGGATACAGATGA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGCTGAAAGGCGGCTATaGTGGCAGAAAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTAERRL*WQKEMV
Trigger: CACCATTTCTTTCTGCCATCATAGCCGCCTTTCAGC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATCATATGCCACGGGCTaGAAGGCGGCTATGATGGCA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKSYATG*KAAMMA
Trigger: TGCCATCATAGCCGCCTTTCAGCCCGTGGCATATGA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGTGTCAGACAGCATCTaGTTGACGTGGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKVSDSI*LTWQRQ
Trigger: CTGGCGCTGCCACGTCAATCAGATGCTGTCTGACAC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATTTGGGCCAGCCATCTaGAAGTGTGGTCCACACATT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTFGPAI*KCGPHI
Trigger: AATGTGTGGACCACACTTGCAGATGGCTGGCCCAAA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp CGTAACCAGCGCCTACTAGTCACCATAAGTTCTCGGTCTTTTAAGGAATCATCTTTGACTTTTCCATCCTaGTCCACTGAGATGTCAACC +
Preference number: 4 (lower is better)
Translates to: RNQRLLVTISSRSFKESSLTFPS*STEMST
Trigger: GGTTGACATCTCAGTGGAGCAGGATGGAAAAGTCAA...AGATGATTCCTTAAAAGACCGAGAACTTATGGTGACTAGTAGGCGCTGGTTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp ACAAGACTCGCAGAGCGTGACACCACCAGCTTTAATATGTTAAGGGCTTCCTTCCCTTCTGAGCTTGACTaGTTAAAAACAGAAACCACA +
Preference number: 4 (lower is better)
Translates to: TRLAERDTTSFNMLRASFPSELD*LKTETT
Trigger: TGTGGTTTCTGTTTTTAAGCAGTCAAGCTCAGAAGG...GAAGGAAGCCCTTAACATATTAAAGCTGGTGGTGTCACGCTCTGCGAGTCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGTTGCAGTGAGAGGCTaGTTTAGGGCCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTVAVRG*FRALKI
Trigger: GATTTTCAGGGCCCTAAAGCAGCCTCTCACTGCAAC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAATCACAAATCCCTGTaGATCTTCTCCTGGATCCCC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQNHKSL*IFSWIP
Trigger: GGGGATCCAGGAGAAGATGCACAGGGATTTGTGATT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCAATCACAAATCCCTGTaGATCTTCTCCTGGATCCCC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCNHKSL*IFSWIP
Trigger: GGGGATCCAGGAGAAGATGCACAGGGATTTGTGATT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCGGCTCAGTAGTGGACTaGACGTCATACATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCGSVVD*TSYIPF
Trigger: GAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATCTGCTTGGCTGGGGCTaGAGACAGGTCAATATGACT +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNLLGWG*RQVNMT
Trigger: AGTCATATTGACCTGTCTGCAGCCCCAGCCAAGCAG...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCTGCTTGGCTGGGGCTaGAGACAGGTCAATATGACT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFLLGWG*RQVNMT
Trigger: AGTCATATTGACCTGTCTGCAGCCCCAGCCAAGCAG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACCTCTTCATCATCATATaGCACGGGCTGAAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDLFIII*HGLKGG
Trigger: GCCGCCTTTCAGCCCGTGGCATATGATGATGAAGAG...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGTTAGAGCCTATAACTaGAAAGCTTCCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQVRAYN*KASCLA
Trigger: GGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAAC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATGCGTATAGCTGACTaGATGTTCATGTGGATGGAT +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAMRIAD*MFMWMD
Trigger: ATCCATCCACATGAACATGCAGTCAGCTATACGCAT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACCATCCCTCTCTGCCTaGCCCACACCCAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVPSLSA*PTPKSF
Trigger: AAAACTTTTGGGTGTGGGGCAGGCAGAGAGGGATGG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAATAATCCATGGGTCTTaGCCTTGGGTCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQIIHGS*PWVTCA
Trigger: TGCACATGTGACCCAAGGCCAAGACCCATGGATTAT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACATTGCAGTGGCTTGTaGAGATCCCCATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVHCSGL*RSPSFS
Trigger: GGAGAAGGATGGGGATCTCCACAAGCCACTGCAATG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATCAAAACCATTGCAGTaGCTTGTGGAGATCCCCATC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQSKPLQ*LVEIPI
Trigger: GATGGGGATCTCCACAAGCCACTGCAATGGTTTTGA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp TATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTTCATACACCTCAGGGTaGCAGTGGTCAAACCCTATA +
Preference number: 4 (lower is better)
Translates to: YTSDCSKPLQWLVEIPILSYTSG*QWSNPI
Trigger: TATAGGGTTTGACCACTGCCACCCTGAGGTGTATGA...AAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATCTTGGGGATATCACTaGGTACGACAAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTSWGYH*VRQDSQ
Trigger: CTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGTACTCCTGGAGGGATaGAGTGTCCCCTTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTVLLEG*SVPFVN
Trigger: ATTGACAAAGGGGACACTCCATCCCTCCAGGAGTAC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGCCTGTGCTAGAAGTTaGTATGATTGCACCATGCGT +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQACARS*YDCTMR
Trigger: ACGCATGGTGCAATCATACCAACTTCTAGCACAGGC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAATTCACGCAGTTATTGTaGGAGATATTGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKFTQLL*EILAAV
Trigger: AACAGCTGCCAATATCTCCCACAATAACTGCGTGAA...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCTTCACGCAGTTATTGTaGGAGATATTGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAFTQLL*EILAAV
Trigger: AACAGCTGCCAATATCTCCCACAATAACTGCGTGAA...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATGGTCAGCAGTCCAATaGTGTGCACAGTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKWSAVQ*CAQCLQ
Trigger: TTGAAGGCACTGTGCACACCATTGGACTGCTGACCA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR CAA 72 bp AAGTGTCTCAGAATCCAGTGCTCACCATATTTCCCATaGGTTTGGCCTGTGCTAGAAGTTGGTATGATTGCA +
Preference number: 4 (lower is better)
Translates to: KCLRIQCSPYFP*VWPVLEVGMIA
Trigger: TGCAATCATACCAACTTCTAGCACAGGCCAAACCAATGGGAAATATGGTGAGCACTGGATTCTGAGACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCTCATAAGACGACTTTaGGTTACAGTGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEALIRRL*VTVLLS
Trigger: TGAAAGCAACACTGTAACTCAAAGTCGTCTTATGAG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCAAAATAAACAAATCCTaGAAGAACATCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAKINKS*KNILPP
Trigger: TGGCGGGAGGATGTTCTTTCAGGATTTGTTTATTTT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCCACAGGCCAATGTATaGGTCACTGCTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVPQANV*VTACGG
Trigger: ACCACCACAAGCAGTGACTCATACATTGGCCTGTGG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGTGCTTAAACAAGGATaGAGGGGATGGGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTVLKQG*RGWDAN
Trigger: ATTGGCATCCCATCCCCTTCATCCTTGTTTAAGCAC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTCACAGCCCAGCTGGTaGACCTTTTTGTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNSQPSW*TFLSRE
Trigger: TTCTCTGGACAAAAAGGTTCACCAGCTGGGCTGTGA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACATGTGAGTGACCCCTaGACTGACAGGATCGGTCAG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKHVSDP*TDRIGQ
Trigger: CTGACCGATCCTGTCAGTTCAGGGGTCACTCACATG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATCCATCCTGCTCCACTaGGATGTCAACCTCATTGAG +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVSILLH*DVNLIE
Trigger: CTCAATGAGGTTGACATCTCAGTGGAGCAGGATGGA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGACTTGTGCTTAGATTaGGTTGTCCAGTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQDLCLD*VVQCFS
Trigger: GGAAAAGCACTGGACAACTCAATCTAAGCACAAGTC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGCACTTCCTCTGTTGTaGTGCTGCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAALPLL*CCQWNL
Trigger: AAGATTCCACTGGCAGCATCACAACAGAGGAAGTGC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACATCCTCTTCACAGACTaGCTCGGGGTAACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDILFTD*LGVTFR
Trigger: CCTGAAAGTTACCCCGAGTCAGTCTGTGAAGAGGAT...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTATCCTCTTCACAGACTaGCTCGGGGTAACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAILFTD*LGVTFR
Trigger: CCTGAAAGTTACCCCGAGTCAGTCTGTGAAGAGGAT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATCGGACTCAGCTTCTTTaGGGATACTTTCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNRTQLL*GYFPVG
Trigger: CCCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCG...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCGGACTCAGCTTCTTTaGGGATACTTTCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFRTQLL*GYFPVG
Trigger: CCCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCTTGATGCGTATAGCTaGCTGCATGTTCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCLDAYS*LHVHVD
Trigger: ATCCACATGAACATGCAGTCAGCTATACGCATCAAG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCTCCTGGGTTGGTCCTaGCAAGACCTAGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYLLGWS*QDLEQG
Trigger: CCCTTGTTCTAGGTCTTGGCAGGACCAACCCAGGAG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACCCAGTACATCAGGTTaGTCTGATCAGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVPSTSG*SDQGSA
Trigger: AGCTGAACCCTGATCAGAGCAACCTGATGTACTGGG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCCCAGTACATCAGGTTaGTCTGATCAGGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFPSTSG*SDQGSA
Trigger: AGCTGAACCCTGATCAGAGCAACCTGATGTACTGGG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTTTTGGGCCAGCCATCTaGAAGTGTGGTCCACACATT +
Preference number: 4 (lower is better)
Translates to: CEMAALLFPKLILEEVELFGPAI*KCGPHI
Trigger: AATGTGTGGACCACACTTGCAGATGGCTGGCCCAAA...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGGCTCTCCTTGGTTATaGTCCATCACTTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNGSPWL*SITFSR
Trigger: GCGACTGAAAGTGATGGAGCATAACCAAGGAGAGCC...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATTGAGGATAGTGGTGTaGAGATGTGAAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQLRIVV*RCEMAA
Trigger: TGCTGCCATTTCACATCTGCACACCACTATCCTCAA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGTTGCAGTGAGAGGCTaGTTTAGGGCCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNVAVRG*FRALKI
Trigger: GATTTTCAGGGCCCTAAAGCAGCCTCTCACTGCAAC...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAAATCACAAATCCCTGTaGATCTTCTCCTGGATCCCC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKNHKSL*IFSWIP
Trigger: GGGGATCCAGGAGAAGATGCACAGGGATTTGTGATT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCTTCTGCACAAACCTTTaGTATTCGACTAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAFCTNL*YSTSCF
Trigger: GAAACAGCTAGTCGAATAGCAAAGGTTTGTGCAGAA...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCATCTCCAGATTAAACTaGTTGGCTGGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFISRLN*LAGAAD
Trigger: GTCTGCAGCCCCAGCCAAGCAGTTTAATCTGGAGAT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAATCTCCAGATTAAACTaGTTGGCTGGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVISRLN*LAGAAD
Trigger: GTCTGCAGCCCCAGCCAAGCAGTTTAATCTGGAGAT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCATACTTTCACCCTCTaGATCTTCCAATTCAACATC +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAHTFTL*IFQFNI
Trigger: GATGTTGAATTGGAAGATGCAGAGGGTGAAAGTATG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCCTGGCTTGCTGTAAGTaGCGCTTCTTCTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRILACCK*RFFFRG
Trigger: TCCTCGGAAGAAGAAGCGGCACTTACAGCAAGCCAG...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCTGGCTTGCTGTAAGTaGCGCTTCTTCTTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVLACCK*RFFFRG
Trigger: TCCTCGGAAGAAGAAGCGGCACTTACAGCAAGCCAG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCCTCTTCATCATCATATaGCACGGGCTGAAAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRILFIII*HGLKGG
Trigger: GCCGCCTTTCAGCCCGTGGCATATGATGATGAAGAG...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAATGAAAAGTAAACACTaGAGAGGACCCGTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKMKSKH*RGPVGV
Trigger: GACACCGACGGGTCCTCTGCAGTGTTTACTTTTCAT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGTTAGAGCCTATAACTaGAAAGCTTCCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKVRAYN*KASCLA
Trigger: GGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAAC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCAGCCTCATTTCACCTaGTTTTGGTTGTTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAQPHFT*FWLFQY
Trigger: ATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTATGCGTATAGCTGACTaGATGTTCATGTGGATGGAT +
Preference number: 4 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCMRIAD*MFMWMD
Trigger: ATCCATCCACATGAACATGCAGTCAGCTATACGCAT...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTCCATACTTTCACCCTaGAGCTCCTCTGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFSILSP*SSSASS
Trigger: GGAAGATGCAGAGGAGCTGCAGGGTGAAAGTATGGA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641795.1
CDS-3UTR CCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATATCGGAACCGATCTGTaGTTAAACCTCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNIGTDL*LNLPPT
Trigger: AGTCGGAGGGAGGTTTAACCACAGATCGGTTCCGAT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAATCGGAACCGATCTGTaGTTAAACCTCCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVIGTDL*LNLPPT
Trigger: AGTCGGAGGGAGGTTTAACCACAGATCGGTTCCGAT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCTCGAGTGGGCACACTaGTACAAAGCAGTAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTALEWAH*YKAVVS
Trigger: ACTCACTACTGCTTTGTACCAGTGTGCCCACTCGAG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCGCACATTCCCAGTGTTaGTTCCTGAATATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCAHSQC*FLNILP
Trigger: AGGAAGGATATTCAGGAACCAACACTGGGAATGTGC...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGCACATTCCCAGTGTTaGTTCCTGAATATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEAHSQC*FLNILP
Trigger: AGGAAGGATATTCAGGAACCAACACTGGGAATGTGC...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGCTCCTGTTGTTGGCATaGGTGGTTCACCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLLLLLA*VVHHLS
Trigger: AGAAAGATGGTGAACCACCCATGCCAACAACAGGAG...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTGTCAGGAATCAACCTTaGAATCGCAGCAATACAAGT +
Preference number: 4 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCVRNQP*NRSNTS
Trigger: ACTTGTATTGCTGCGATTCCAAGGTTGATTCCTGAC...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGAATACATTGGAATATaGGCTCCTTTCCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQEYIGI*APFQRR
Trigger: CCTCCTCTGGAAAGGAGCCCATATTCCAATGTATTC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCATGTCGCCTTGCTGTaGGGAGAGGTTTTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAHVALL*GEVLSP
Trigger: TGGACTTAAAACCTCTCCCCACAGCAAGGCGACATG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACATGTCGCCTTGCTGTaGGGAGAGGTTTTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVHVALL*GEVLSP
Trigger: TGGACTTAAAACCTCTCCCCACAGCAAGGCGACATG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAAGCCATCTGCAAGTGTaGTCCACACATTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVSHLQV*STHSPP
Trigger: AGGTGGAGAATGTGTGGACCACACTTGCAGATGGCT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGGCAGTGGCTCTCCTTaGTTATGCTCCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFGSGSP*LCSITF
Trigger: GAAAGTGATGGAGCATAACCAAGGAGAGCCACTGCC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGCAGAAACATCCTCATaGTTCCAAAGGGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNAETSS*FQRGPL
Trigger: AAGAGGGCCCCTTTGGAACCATGAGGATGTTTCTGC...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGCAGAAACATCCTCATaGTTCCAAAGGGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFAETSS*FQRGPL
Trigger: AAGAGGGCCCCTTTGGAACCATGAGGATGTTTCTGC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACTGTGCATCTTCTCCTaGATCCCCTACAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKLCIFS*IPYSFY
Trigger: GTAGAAACTGTAGGGGATCCAGGAGAAGATGCACAG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACGAGCTGCTGAAGTCCTaGAAAATTAGTCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYELLKS*KISPFQ
Trigger: TTGAAATGGACTAATTTTCCAGGACTTCAGCAGCTC...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTCTTGGGGATATCACTaGGTACGACAAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNSWGYH*VRQDSQ
Trigger: CTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTCTTGGGGATATCACTaGGTACGACAAGACTCGCAG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFSWGYH*VRQDSQ
Trigger: CTGCGAGTCTTGTCGTACCCAGTGATATCCCCAAGA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCTCCTCCATAGGTCTTaGGGATATCACTGGGTACGA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFLLHRS*GYHWVR
Trigger: TCGTACCCAGTGATATCCCCAAGACCTATGGAGGAG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCTCCTCCATAGGTCTTaGGGATATCACTGGGTACGA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTALLHRS*GYHWVR
Trigger: TCGTACCCAGTGATATCCCCAAGACCTATGGAGGAG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGTGCTACTAGAGCACTaGTACTCCTGGAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIVLLEH*YSWRDG
Trigger: TCCATCCCTCCAGGAGTACCAGTGCTCTAGTAGCAC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGTGCTACTAGAGCACTaGTACTCCTGGAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKVLLEH*YSWRDG
Trigger: TCCATCCCTCCAGGAGTACCAGTGCTCTAGTAGCAC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGTGCGTGAGAGTATCTaGCTTGCTGTAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYVRESI*LAVSAA
Trigger: AGCGGCACTTACAGCAAGCCAGATACTCTCACGCAC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGTGCGTGAGAGTATCTaGCTTGCTGTAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLVRESI*LAVSAA
Trigger: AGCGGCACTTACAGCAAGCCAGATACTCTCACGCAC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGTGCGTGAGAGTATCTaGCTTGCTGTAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGVRESI*LAVSAA
Trigger: AGCGGCACTTACAGCAAGCCAGATACTCTCACGCAC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGTGGAATCTTCAGACTaGAGAAGTAAGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQVESSD*RSKSGW
Trigger: CCATCCTGACTTACTTCTCCAGTCTGAAGATTCCAC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCAGGATACTTTCCAGTTaGGCAAGTTCCTCTGACATG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCRILSS*ASSSDM
Trigger: CATGTCAGAGGAACTTGCCCAACTGGAAAGTATCCT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGCCTGTGCTAGAAGTTaGTATGATTGCACCATGCGT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKACARS*YDCTMR
Trigger: ACGCATGGTGCAATCATACCAACTTCTAGCACAGGC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTGGTCAGCAGTCCAATaGTGTGCACAGTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAWSAVQ*CAQCLQ
Trigger: TTGAAGGCACTGTGCACACCATTGGACTGCTGACCA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAGTGTGATGTATCTCTaGACACCATCCCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTASVMYL*TPSLSA
Trigger: GGCAGAGAGGGATGGTGTCCAGAGATACATCACACT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR CAA 72 bp AGTTCATCGCCATACTTTGCTGTCATATACATCAGATaGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCC +
Preference number: 4 (lower is better)
Translates to: SSSPYFAVIYIR*FKTIAVACGDP
Trigger: GGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATATGACAGCAAAGTATGGCGATGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp CTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATaGGGTCCCATTACTATTAATAAGTGCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRRTEATVRMLL*GPITINKCRSR
Trigger: CCTGCTTCTGCACTTATTAATAGTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp GTGTGTGTACTGTACAAACTCATCATGTGTGCCAGATaGACAAGTGTTGGGCATTTTTCTTCTGCACAAACC +
Preference number: 4 (lower is better)
Translates to: VCVLYKLIMCAR*TSVGHFSSAQT
Trigger: GGTTTGTGCAGAAGAAAAATGCCCAACACTTGTCAATCTGGCACACATGATGAGTTTGTACAGTACACACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp GTATCCAGGTGTTCTTGCAACTCCAAAACACCAAACTaGAGTGTTTCCAGCAAACCACATGACATCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VSRCSCNSKTPN*SVSSKPHDISV
Trigger: AACACTGATGTCATGTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATTTCCCCAAGTGGAATaGAAGTTGGAAGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTFPQVE*KLEEAQ
Trigger: CTGTGCTTCTTCCAACTTTCATTCCACTTGGGGAAA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAGATCTTCACCCCTCTaGAGAGATCTGGACAATAGC +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTARSSPL*RDLDNS
Trigger: GCTATTGTCCAGATCTCTTCAGAGGGGTGAAGATCT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGTGAGTCACCGTGTGTaGAGCAGAATATGGAATGTT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTVSHRV*SRIWNV
Trigger: AACATTCCATATTCTGCTTCACACACGGTGACTCAC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGGATCGGGTACAGGATaGACAGGAATCTGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFGSGTG*TGICFR
Trigger: TCTAAAGCAGATTCCTGTTCATCCTGTACCCGATCC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTCTCATAAGACGACTTTaGGTTACAGTGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCLIRRL*VTVLLS
Trigger: TGAAAGCAACACTGTAACTCAAAGTCGTCTTATGAG...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCAAACTGACATTCCTATaGCTTTTGCTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAKLTFL*LLLLHL
Trigger: CAGATGAAGAAGCAAAAGTCATAGGAATGTCAGTTT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACCACAGGCCAATGTATaGGTCACTGCTTGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKPQANV*VTACGG
Trigger: ACCACCACAAGCAGTGACTCATACATTGGCCTGTGG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATGCAGATGTGGAAGATaGCGATGTTGCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKCRCGR*RCCCTA
Trigger: TGCAGTGCAGCAACATCGTCATCTTCCACATCTGCA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCACAGGAACAAGGGATTCTGTaGTTTCCATGCTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SSHLSSSSFRAKVTSSSQEQGIL*FPCSQN
Trigger: GTTCTGAGAGCATGGAAATCACAGAATCCCTTGTTC...CTGTGAAGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGGGGGATTATCCATGTaGGTGACCCCTGAACTGACA +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYGGLSM*VTPELT
Trigger: TGTCAGTTCAGGGGTCACTCACATGGATAATCCCCC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR TCA 90 bp TCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTCACAGGCTATGTTACACCTGTaGAGAGGTAATCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SSHLSSSSFRAKVTSSSQAMLHL*RGNPGD
Trigger: ATCACCTGGATTACCTCTTCACAGGTGTAACATAGC...CTGTGAAGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTCCATCCTGCTCCACTaGGATGTCAACCTCATTGAG +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGSILLH*DVNLIE
Trigger: CTCAATGAGGTTGACATCTCAGTGGAGCAGGATGGA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGCTGCTTTAGGGCCCTaGAAATCTGAAAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIAALGP*KSERIS
Trigger: GGAGATCCTTTCAGATTTTCAGGGCCCTAAAGCAGC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGACTTGTGCTTAGATTaGGTTGTCCAGTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKDLCLD*VVQCFS
Trigger: GGAAAAGCACTGGACAACTCAATCTAAGCACAAGTC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGTTAAGAGGAAAGCCTaGCAATTGGGAAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFVKRKA*QLGRIH
Trigger: GTGGATCCTTCCCAATTGTCAGGCTTTCCTCTTAAC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTCATGTGTGCCAGATTaGCAAGTGTTGGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCSCVPD*QVLGIF
Trigger: AAAAATGCCCAACACTTGTCAATCTGGCACACATGA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACCAGCCGCACTGTGCTaGTCACCATATTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKPAALC*SPYLFP
Trigger: TGGAAACAAATATGGTGATCAGCACAGTGCGGCTGG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAGAACCAGAAGAAGTTaGGGAAGTACTTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQRTRRS*GSTSSD
Trigger: GTCACTAGAAGTACTTCCTCAACTTCTTCTGGTTCT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTCATCTGTATCCTCCTaGTTGGTGAGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVSSVSS*LVRFRL
Trigger: CAGCCTGAACCTCACCAATCAGGAGGATACAGATGA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTCATCTGTATCCTCCTaGTTGGTGAGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIISSVSS*LVRFRL
Trigger: CAGCCTGAACCTCACCAATCAGGAGGATACAGATGA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTCATCTGTATCCTCCTaGTTGGTGAGGTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYSSVSS*LVRFRL
Trigger: CAGCCTGAACCTCACCAATCAGGAGGATACAGATGA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGCACTTCCTCTGTTGTaGTGCTGCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLALPLL*CCQWNL
Trigger: AAGATTCCACTGGCAGCATCACAACAGAGGAAGTGC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCATCCTCTTCACAGACTaGCTCGGGGTAACTTTCAGG +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIILFTD*LGVTFR
Trigger: CCTGAAAGTTACCCCGAGTCAGTCTGTGAAGAGGAT...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTTGCTCTTCTTCATCTTaGCTAGACAGTCCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: EMSISSFSEADSASLRILCSSSS*LDSPEK
Trigger: TTTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCA...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACGCTGAAAGGCGGCTATaGTGGCAGAAAGAAATGGTG +
Preference number: 4 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNAERRL*WQKEMV
Trigger: CACCATTTCTTTCTGCCATCATAGCCGCCTTTCAGC...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGACTGTTGGGCATTCTaGACACAGCATCATCACTTC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVDCWAF*TQHHHF
Trigger: GAAGTGATGATGCTGTGTTCAGAATGCCCAACAGTC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACCAAAACACCAAACTTaGGTGTTTCCAGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTPKHQT*VFPANH
Trigger: GTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTTGGGCAAGTTCCTCTaGCATGTTGATGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLLGKFL*HVDDLC
Trigger: GCAGAGGTCATCAACATGTCAGAGGAACTTGCCCAA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTGGGCAAGTTCCTCTaGCATGTTGATGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLGKFL*HVDDLC
Trigger: GCAGAGGTCATCAACATGTCAGAGGAACTTGCCCAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTTTTGTAGTTGGCTTCTaGCATGTCCAGGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSFVVGF*HVQVRA
Trigger: GGCTCTAACCTGGACATGTCAGAAGCCAACTACAAA...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTTGTAGTTGGCTTCTaGCATGTCCAGGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVFVVGF*HVQVRA
Trigger: GGCTCTAACCTGGACATGTCAGAAGCCAACTACAAA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATCTTTCCTAAAGGCCTaGAGTGTCTCAGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKSFLKA*SVSESS
Trigger: ACTGGATTCTGAGACACTTCAGGCCTTTAGGAAAGA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATCTTCTGCACAAACCTaGCAATTGGGAAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVSSAQT*QLGRIH
Trigger: GTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTCTGAAGTCTTGTGTATaGAAACATCCAAGCATAGCT +
Preference number: 4 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCLKSCV*KHPSIA
Trigger: AGCTATGCTTGGATGTTTGCATACACAAGACTTCAG...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTAAATGTCTCGACGCCTaGGCCGTTTCATATTCTCTG +
Preference number: 4 (lower is better)
Translates to: CEMAALLFPKLILEEVELKCLDA*AVSYSL
Trigger: CAGAGAATATGAAACGGCGCAGGCGTCGAGACATTT...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATATCAAGGCCACCACTTaGACTGTGACTAATGACACC +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNIKATT*TVTNDT
Trigger: GGTGTCATTAGTCACAGTGCAAGTGGTGGCCTTGAT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAATCAAGGCCACCACTTaGACTGTGACTAATGACACC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVIKATT*TVTNDT
Trigger: GGTGTCATTAGTCACAGTGCAAGTGGTGGCCTTGAT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTTTGGGCCAGCCATCTaGAAGTGTGGTCCACACATT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIFGPAI*KCGPHI
Trigger: AATGTGTGGACCACACTTGCAGATGGCTGGCCCAAA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGCTTATTATCAGGATTaGCATCTGTGGGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTAYYQD*HLWELP
Trigger: TGGTAGCTCCCACAGATGGCAATCCTGATAATAAGC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATTGAGGATAGTGGTGTaGAGATGTGAAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKLRIVV*RCEMAA
Trigger: TGCTGCCATTTCACATCTGCACACCACTATCCTCAA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGTTGCAGTGAGAGGCTaGTTTAGGGCCCTGAAAATC +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKVAVRG*FRALKI
Trigger: GATTTTCAGGGCCCTAAAGCAGCCTCTCACTGCAAC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAATCACAAATCCCTGTaGATCTTCTCCTGGATCCCC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFNHKSL*IFSWIP
Trigger: GGGGATCCAGGAGAAGATGCACAGGGATTTGTGATT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAAGCTTTTCCTGTTAGCTaGATACTTGTTTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKAFPVS*ILVSHY
Trigger: ATAATGGGAAACAAGTATGCAGCTAACAGGAAAAGC...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGGCTCAGTAGTGGACTaGACGTCATACATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVGSVVD*TSYIPF
Trigger: GAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATCTGAGAAGGAGTCATaGAGGTATCTGCACACGACA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVSEKES*RYLHTT
Trigger: TGTCGTGTGCAGATACCTGCATGACTCCTTCTCAGA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCTGCTTGGCTGGGGCTaGAGACAGGTCAATATGACT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSLLGWG*RQVNMT
Trigger: AGTCATATTGACCTGTCTGCAGCCCCAGCCAAGCAG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCATCTCCAGATTAAACTaGTTGGCTGGGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIISRLN*LAGAAD
Trigger: GTCTGCAGCCCCAGCCAAGCAGTTTAATCTGGAGAT...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCAAACTGTTGTTCACTaGTATTATCTTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAQTVVH*YYLPQL
Trigger: TAGCTGTGGAAGATAATAGCAGTGAACAACAGTTTG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACATGAAAAGTAAACACTaGAGAGGACCCGTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDMKSKH*RGPVGV
Trigger: GACACCGACGGGTCCTCTGCAGTGTTTACTTTTCAT...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTACCAATGCGTTaGAGACTATCACCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCLVPMR*RLSPRK
Trigger: CTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCGTATCCAGGTGTTCTTaGAACTCCAAAACACCAAAC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCVSRCS*NSKTPN
Trigger: GTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATAC...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTAAATCCAAGCAGCTTTaGAGGTCTTCAGCTAAAATG +
Preference number: 4 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCKSKQL*RSSAKM
Trigger: CATTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTT...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCAATGGTGTGCACAGTaGCTTCAATTAATGCACTTG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCQWCAQ*LQLMHL
Trigger: CAAGTGCATTAATTGAAGGCACTGTGCACACCATTG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTACCCTGCAGCTCCTCTaGATCTTCCAATTCAACATC +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTATLQLL*IFQFNI
Trigger: GATGTTGAATTGGAAGATGCAGAGGAGCTGCAGGGT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641795.1
CDS-3UTR CCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTTACAGGCACTCGAGTaGGCACACTGGTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIILQALE*AHWYKA
Trigger: TGCTTTGTACCAGTGTGCCCACTCGAGTGCCTGTAA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTACAGGCACTCGAGTaGGCACACTGGTACAAAGCA +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLQALE*AHWYKA
Trigger: TGCTTTGTACCAGTGTGCCCACTCGAGTGCCTGTAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCTCCTGTTGTTGGCATaGGTGGTTCACCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTALLLLA*VVHHLS
Trigger: AGAAAGATGGTGAACCACCCATGCCAACAACAGGAG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGAATAACTCCTGTTGTTaGCATGGGTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLNNSCC*HGWFTI
Trigger: GATGGTGAACCACCCATGCCAACAACAGGAGTTATT...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTTCAAGAAGTGTGGGATaGACATCAGTCACTTCACGA +
Preference number: 4 (lower is better)
Translates to: EMSISSFSEADSASLRILSRSVG*TSVTSR
Trigger: TCGTGAAGTGACTGATGTCCATCCCACACTTCTTGA...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTGAATACATTGGAATATaGGCTCCTTTCCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EMSISSFSEADSASLRILEYIGI*APFQRR
Trigger: CCTCCTCTGGAAAGGAGCCCATATTCCAATGTATTC...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCATAATCCATGGGTCTTaGCCTTGGGTCACATGTGCA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFIIHGS*PWVTCA
Trigger: TGCACATGTGACCCAAGGCCAAGACCCATGGATTAT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGAGACTTATAATCCATaGGTCTTGGCCTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAETYNP*VLALGH
Trigger: GTGACCCAAGGCCAAGACCCATGGATTATAAGTCTC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTTCCCTAAAAGCTCCTaGGTTGGTCCTGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSFPKSS*VGPAKT
Trigger: GGTCTTGGCAGGACCAACCCAGGAGCTTTTAGGGAA...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCATGTCGCCTTGCTGTaGGGAGAGGTTTTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLHVALL*GEVLSP
Trigger: TGGACTTAAAACCTCTCCCCACAGCAAGGCGACATG...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACATTGCAGTGGCTTGTaGAGATCCCCATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKHCSGL*RSPSFS
Trigger: GGAGAAGGATGGGGATCTCCACAAGCCACTGCAATG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGTAAGGCAAGAGGCTTaGTTCGCTATTCACCCCACA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIVRQEA*FAIHPT
Trigger: TGTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTAC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGGCAGTGGCTCTCCTTaGTTATGCTCCATCACTTTC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGGSGSP*LCSITF
Trigger: GAAAGTGATGGAGCATAACCAAGGAGAGCCACTGCC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGCAGAAACATCCTCATaGTTCCAAAGGGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKAETSS*FQRGPL
Trigger: AAGAGGGCCCCTTTGGAACCATGAGGATGTTTCTGC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGCAGAAACATCCTCATaGTTCCAAAGGGGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLAETSS*FQRGPL
Trigger: AAGAGGGCCCCTTTGGAACCATGAGGATGTTTCTGC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACTCCTCCATAGGTCTTaGGGATATCACTGGGTACGA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKLLHRS*GYHWVR
Trigger: TCGTACCCAGTGATATCCCCAAGACCTATGGAGGAG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGTACTCCTGGAGGGATaGAGTGTCCCCTTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYVLLEG*SVPFVN
Trigger: ATTGACAAAGGGGACACTCCATCCCTCCAGGAGTAC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGTACTCCTGGAGGGATaGAGTGTCCCCTTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLVLLEG*SVPFVN
Trigger: ATTGACAAAGGGGACACTCCATCCCTCCAGGAGTAC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCGTACTCCTGGAGGGATaGAGTGTCCCCTTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIVLLEG*SVPFVN
Trigger: ATTGACAAAGGGGACACTCCATCCCTCCAGGAGTAC...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGTGCTACTAGAGCACTaGTACTCCTGGAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYVLLEH*YSWRDG
Trigger: TCCATCCCTCCAGGAGTACCAGTGCTCTAGTAGCAC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATAGAAGCCTCCAAAGTTaGGGTCTCATCCCTGATTTG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNRSLQS*GLIPDL
Trigger: CAAATCAGGGATGAGACCCCAACTTTGGAGGCTTCT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAGAAGCCTCCAAAGTTaGGGTCTCATCCCTGATTTG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTARSLQS*GLIPDL
Trigger: CAAATCAGGGATGAGACCCCAACTTTGGAGGCTTCT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACGACGTCTGTACTTCTaGAAAACCATCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTRRLYF*KTILLF
Trigger: GAAGAGCAAGATGGTTTTCCAGAAGTACAGACGTCG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGCCATCAGTTTGTAGTTaGCTTCTGACATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLPSVCS*LLTCPG
Trigger: ACCTGGACATGTCAGAAGCCAACTACAAACTGATGG...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACCATCAGTTTGTAGTTaGCTTCTGACATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTPSVCS*LLTCPG
Trigger: ACCTGGACATGTCAGAAGCCAACTACAAACTGATGG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCTGGTTGTTTCAGTATTaGAGGCCATTATTGCAAACA +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAWLFQY*RPLLQT
Trigger: TGTTTGCAATAATGGCCTCCAATACTGAAACAACCA...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTCATTTCACCTGCTTTTaGTTGTTTCAGTATTGGAGG +
Preference number: 4 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCHFTCF*LFQYWR
Trigger: CCTCCAATACTGAAACAACCAAAAGCAGGTGAAATG...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp GAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTaGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ETALISASFHLL*VVSVLEAIIAN
Trigger: GTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR CAA 72 bp CTCTCTGATTTATCCAAAGGCAAATGGATAAGCAGTTaGTTGAGAAGCCTGAGAGCCAGGAGGTATTCATAT +
Preference number: 4 (lower is better)
Translates to: LSDLSKGKWISS*LRSLRARRYSY
Trigger: ATATGAATACCTCCTGGCTCTCAGGCTTCTCAACAAACTGCTTATCCATTTGCCTTTGGATAAATCAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp CACTTCCAAGGAACTTTTAAATTTGGTACCAATGCGTaGCAGACTATCACCAAGAAAGCTGACTGCCTCATT +
Preference number: 4 (lower is better)
Translates to: HFQGTFKFGTNA*QTITKKADCLI
Trigger: AATGAGGCAGTCAGCTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAATTTAAAAGTTCCTTGGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp GGCTTCTCTTTTCACATTGTATGTATCCAGGTGTTCTaGCAACTCCAAAACACCAAACTTGAGTGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GFSFHIVCIQVF*QLQNTKLECFQ
Trigger: CTGGAAACACTCAAGTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACATACAATGTGAAAAGAGAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTTTCCCCAAGTGGAATaGAAGTTGGAAGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNFPQVE*KLEEAQ
Trigger: CTGTGCTTCTTCCAACTTTCATTCCACTTGGGGAAA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR TCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACAGATCTTCACCCCTCTaGAGAGATCTGGACAATAGC +
Preference number: 4 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNRSSPL*RDLDNS
Trigger: GCTATTGTCCAGATCTCTTCAGAGGGGTGAAGATCT...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTCTGAAGCGTATCACTTaGGACAGTAATTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVLKRIT*DSNFLV
Trigger: CACCAAGAAATTACTGTCTCAAGTGATACGCTTCAG...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAGGAACCACACTTCGTaGGCCTTTTGGAAAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIRNHTS*AFWKKC
Trigger: GCACTTTTTCCAAAAGGCTCACGAAGTGTGGTTCCT...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTCTTCACAAATATATTaGGAGGTGTGTCACGAGGAA +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCSSQIY*EVCHEE
Trigger: TTCCTCGTGACACACCTCTCAATATATTTGTGAAGA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTTTACAAGGAAGACTCTaGGACCTATGTTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: YTSDCSKPLQWLVEIPILLQGRL*DLCSFS
Trigger: AGAGAATGAACATAGGTCTCAGAGTCTTCCTTGTAA...AAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CGTAACCAGCGCCTACTAGTCACCATAAGTTCTCGGTCTTTTAAGGAATCATCTTTGAGGATAGTAAACTaGCATTCCTATGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: RNQRLLVTISSRSFKESSLRIVN*HSYDFC
Trigger: GCAAAAGTCATAGGAATGTCAGTTTACTATCCTCAA...AGATGATTCCTTAAAAGACCGAGAACTTATGGTGACTAGTAGGCGCTGGTTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGCTTTGTCCAAATGTCTaGGGATGCTATCTAATGCTT +
Preference number: 4 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEELCPNV*GCYLML
Trigger: AAGCATTAGATAGCATCCTCAGACATTTGGACAAAG...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGAGTTCTTCATCCATATaGATTGTGAGCCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEESSSSI*IVSLAN
Trigger: GTTAGCAAGGCTCACAATTCATATGGATGAAGAACT...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTGCACTGGAACATTCTaGATAATATTCGCCACTAAG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCCTGTF*IIFATK
Trigger: CTTAGTGGCGAATATTATTCAGAATGTTCCAGTGCA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATCCACCTTCACACTATaGTCAATGATGAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTSTFTL*SMMRSV
Trigger: GACTGATCTCATCATTGATCATAGTGTGAAGGTGGA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAGTGGTGTGCAGATGTaGAATGGCAGCACTGTTATT +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTASGVQM*NGSTVI
Trigger: AATAACAGTGCTGCCATTTCACATCTGCACACCACT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTCCATCCTGCTCCACTaGGATGTCAACCTCATTGAG +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSSILLH*DVNLIE
Trigger: CTCAATGAGGTTGACATCTCAGTGGAGCAGGATGGA...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGGGCCCTCTTTTTCTTaGGGTAATGAATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVGPSFS*GNEFHE
Trigger: CTCATGGAATTCATTACCTCAAGAAAAAGAGGGCCC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGGGCCCTCTTTTTCTTaGGGTAATGAATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAGPSFS*GNEFHE
Trigger: CTCATGGAATTCATTACCTCAAGAAAAAGAGGGCCC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGGGCCCTCTTTTTCTTaGGGTAATGAATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNGPSFS*GNEFHE
Trigger: CTCATGGAATTCATTACCTCAAGAAAAAGAGGGCCC...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGACTTGTGCTTAGATTaGGTTGTCCAGTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTADLCLD*VVQCFS
Trigger: GGAAAAGCACTGGACAACTCAATCTAAGCACAAGTC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGACTTGTGCTTAGATTaGGTTGTCCAGTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFDLCLD*VVQCFS
Trigger: GGAAAAGCACTGGACAACTCAATCTAAGCACAAGTC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGTTAAGAGGAAAGCCTaGCAATTGGGAAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKVKRKA*QLGRIH
Trigger: GTGGATCCTTCCCAATTGTCAGGCTTTCCTCTTAAC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCAAATGCTGGATTAAGTaGGGCAATAAGCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCKCWIK*GNKQRM
Trigger: CATCCTTTGCTTATTGCCTCACTTAATCCAGCATTT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTGCACTTCCTCTGTTGTaGTGCTGCCAGTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSALPLL*CCQWNL
Trigger: AAGATTCCACTGGCAGCATCACAACAGAGGAAGTGC...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGTCTCATCCCTGATTTaGAGCACTTCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKVSSLI*STSSVV
Trigger: CACAACAGAGGAAGTGCTTCAAATCAGGGATGAGAC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATGCTCTTCTTCATCTTaGCTAGACAGTCCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVCSSSS*LDSPEK
Trigger: TTTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGACTGTTGGGCATTCTaGACACAGCATCATCACTTC +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKDCWAF*TQHHHF
Trigger: GAAGTGATGATGCTGTGTTCAGAATGCCCAACAGTC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTCCAGCAAACCACATaGCATCAGTGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVFQQTT*HQCFSI
Trigger: GATGCTGAAACACTGATGTCATGTGGTTTGCTGGAA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTTCCAGCAAACCACATaGCATCAGTGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNFQQTT*HQCFSI
Trigger: GATGCTGAAACACTGATGTCATGTGGTTTGCTGGAA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACCAAAACACCAAACTTaGGTGTTTCCAGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVPKHQT*VFPANH
Trigger: GTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCGGACTCAGCTTCTTTaGGGATACTTTCCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSRTQLL*GYFPVG
Trigger: CCCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATTTGTAGTTGGCTTCTaGCATGTCCAGGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKFVVGF*HVQVRA
Trigger: GGCTCTAACCTGGACATGTCAGAAGCCAACTACAAA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTCTTTCCTAAAGGCCTaGAGTGTCTCAGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFSFLKA*SVSESS
Trigger: ACTGGATTCTGAGACACTTCAGGCCTTTAGGAAAGA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCAAAATGAAACAGCCTTaGTTTCAGCCTCATTTCACC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCKMKQP*FQPHFT
Trigger: GGTGAAATGAGGCTGAAATCAAGGCTGTTTCATTTT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCCTTGATGCGTATAGCTaGCTGCATGTTCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLALDAYS*LHVHVD
Trigger: ATCCACATGAACATGCAGTCAGCTATACGCATCAAG...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCTTGATGCGTATAGCTaGCTGCATGTTCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFLDAYS*LHVHVD
Trigger: ATCCACATGAACATGCAGTCAGCTATACGCATCAAG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCACGATGTTGCTGCACTaGAGCAAAGGATCAGATAGT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFTMLLH*SKGSDS
Trigger: ACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTAAATGTCTCGACGCCTaGGCCGTTTCATATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLKCLDA*AVSYSL
Trigger: CAGAGAATATGAAACGGCGCAGGCGTCGAGACATTT...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCGATGCTAAAAGGACCTaGCCAGTGACTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIDAKRT*PVTEQH
Trigger: ATGCTGTTCAGTCACTGGGCAGGTCCTTTTAGCATC...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAATTGTTCAAAACCATTaGAGTGGCTTGTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTIVQNH*SGLWRS
Trigger: GGATCTCCACAAGCCACTGCAATGGTTTTGAACAAT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCTTCATCGCCATACTTTaGTGTCATATACATCAGATT +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAFIAIL*CHIHQI
Trigger: AATCTGATGTATATGACAGCAAAGTATGGCGATGAA...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGGCTCTCCTTGGTTATaGTCCATCACTTTCAGTCGC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYGSPWL*SITFSR
Trigger: GCGACTGAAAGTGATGGAGCATAACCAAGGAGAGCC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGACTTTTCCATCCTaGTCCACTGAGATGTCAACC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVLTFPS*STEMST
Trigger: GGTTGACATCTCAGTGGAGCAGGATGGAAAAGTCAA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTAGTTTACTGAGGAGGTaGACGGTCATTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVSLLRR*TVISCV
Trigger: TACACAAGAAATGACCGTGCACCTCCTCAGTAAACT...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTGGGCATTTTTCTTCTaGACAAACCTTTGCTATTCG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCWAFFF*TNLCYS
Trigger: CGAATAGCAAAGGTTTGTGCAGAAGAAAAATGCCCA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTCTGAGAAGGAGTCATaGAGGTATCTGCACACGACA +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLSEKES*RYLHTT
Trigger: TGTCGTGTGCAGATACCTGCATGACTCCTTCTCAGA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTTGTTTAACATCTGTGTaGGTGAGAGTATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVCLTSV*VRVSGL
Trigger: CAAGCCAGATACTCTCACGCACACAGATGTTAAACA...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCACCAAGAAAGCTGACTaGCTCATTAGTTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCTKKAD*LISYFS
Trigger: GGAGAAATAACTAATGAGGCAGTCAGCTTTCTTGGT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACCAAGAAAGCTGACTaGCTCATTAGTTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQTKKAD*LISYFS
Trigger: GGAGAAATAACTAATGAGGCAGTCAGCTTTCTTGGT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGTTAGAGCCTATAACTaGAAAGCTTCCTGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGVRAYN*KASCLA
Trigger: GGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAAC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCGGTATGATTGCACCATaGGTAGAGACTCTCTTATTT +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCGMIAP*VETLLF
Trigger: AAATAAGAGAGTCTCTACGCATGGTGCAATCATACC...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAAGAAGTTGGTATGATTaGACCATGCGTAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTRSWYD*TMRRDS
Trigger: AGAGTCTCTACGCATGGTGCAATCATACCAACTTCT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAATGCGTATAGCTGACTaGATGTTCATGTGGATGGAT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKMRIAD*MFMWMD
Trigger: ATCCATCCACATGAACATGCAGTCAGCTATACGCAT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAAGCAGTCCAATGGTGTaGACAGTGCCTTCAATTAAT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTSSPMV*TVPSIN
Trigger: ATTAATTGAAGGCACTGTGCACACCATTGGACTGCT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTTGGGCATTTTTCTTCTaGACAAACCTGACAATTGGG +
Preference number: 4 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVWAFFF*TNLTIG
Trigger: CCCAATTGTCAGGTTTGTGCAGAAGAAAAATGCCCA...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTCCACATGGAATACATTaGAATATGGGCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: EMSISSFSEADSASLRILPHGIH*NMGSFP
Trigger: TGGAAAGGAGCCCATATTCCAATGTATTCCATGTGG...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCATCACATCAAACTGGTaGCTAATAGGAGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCITSNW*LIGEEF
Trigger: GAACTCTTCTCCTATTAGCCACCAGTTTGATGTGAT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATACATGGGTCTTGGCCTTaGGTCACATGTGCAAATATC +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIHGSWP*VTCANI
Trigger: GATATTTGCACATGTGACCCAAGGCCAAGACCCATG...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACCGTTTCATATTCTCTaGCCTTCTTTCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVPFHIL*PSFECF
Trigger: GAAGCACTCGAAAGAAGGCCAGAGAATATGAAACGG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAGCCATCTGCAAGTGTaGTCCACACATTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSHLQV*STHSPP
Trigger: AGGTGGAGAATGTGTGGACCACACTTGCAGATGGCT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTCATACACCTCAGGGTaGCAGTGGTCAAACCCTATA +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIISYTSG*QWSNPI
Trigger: TATAGGGTTTGACCACTGCCACCCTGAGGTGTATGA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATATCATACACCTCAGGGTaGCAGTGGTCAAACCCTATA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWISYTSG*QWSNPI
Trigger: TATAGGGTTTGACCACTGCCACCCTGAGGTGTATGA...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATCATACACCTCAGGGTaGCAGTGGTCAAACCCTATA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKSYTSG*QWSNPI
Trigger: TATAGGGTTTGACCACTGCCACCCTGAGGTGTATGA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACTGTGCATCTTCTCCTaGATCCCCTACAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKLCIFS*IPYSFY
Trigger: GTAGAAACTGTAGGGGATCCAGGAGAAGATGCACAG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCTGTGCATCTTCTCCTaGATCCCCTACAGTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLLCIFS*IPYSFY
Trigger: GTAGAAACTGTAGGGGATCCAGGAGAAGATGCACAG...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGAGCTGCTGAAGTCCTaGAAAATTAGTCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQELLKS*KISPFQ
Trigger: TTGAAATGGACTAATTTTCCAGGACTTCAGCAGCTC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGGAAAGCCTGACAATTaGGAAGGATCCACCAATGTA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVGKPDN*EGSTNV
Trigger: TACATTGGTGGATCCTTCCCAATTGTCAGGCTTTCC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGGAAAGCCTGACAATTaGGAAGGATCCACCAATGTA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFGKPDN*EGSTNV
Trigger: TACATTGGTGGATCCTTCCCAATTGTCAGGCTTTCC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACTCCTCCATAGGTCTTaGGGATATCACTGGGTACGA +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKLLHRS*GYHWVR
Trigger: TCGTACCCAGTGATATCCCCAAGACCTATGGAGGAG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAATTAGGCTAGTCTGTTaGTCACCGACTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVIRLVC*SPTSKS
Trigger: GGATTTGGAAGTCGGTGACCAACAGACTAGCCTAAT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTATTAGGCTAGTCTGTTaGTCACCGACTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAIRLVC*SPTSKS
Trigger: GGATTTGGAAGTCGGTGACCAACAGACTAGCCTAAT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCATTAGGCTAGTCTGTTaGTCACCGACTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFIRLVC*SPTSKS
Trigger: GGATTTGGAAGTCGGTGACCAACAGACTAGCCTAAT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGTATTGTTTCATCAGTaGCAGAATCACTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: ALISASFHLLLVVSVLEAVLFHQ*QNHCLT
Trigger: TGTTAAACAGTGATTCTGCCACTGATGAAACAATAC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTAGAAGCCTCCAAAGTTaGGGTCTCATCCCTGATTTG +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGRSLQS*GLIPDL
Trigger: CAAATCAGGGATGAGACCCCAACTTTGGAGGCTTCT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGCCTGTGCTAGAAGTTaGTATGATTGCACCATGCGT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLACARS*YDCTMR
Trigger: ACGCATGGTGCAATCATACCAACTTCTAGCACAGGC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACATTTCACCTGCTTTTaGTTGTTTCAGTATTGGAGG +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQHFTCF*LFQYWR
Trigger: CCTCCAATACTGAAACAACCAAAAGCAGGTGAAATG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCTACATTCTAAACTCTaGAATCACAGAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCLHSKL*NHRAQF
Trigger: AAACTGGGCTCTGTGATTCCAGAGTTTAGAATGTAG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAGTGTGATGTATCTCTaGACACCATCCCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSVMYL*TPSLSA
Trigger: GGCAGAGAGGGATGGTGTCCAGAGATACATCACACT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACAGTGCTCTGCTACTaGGCTCATAGAGCTTATCAA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKTVLCY*AHRAYQ
Trigger: TTGATAAGCTCTATGAGCTCAGTAGCAGAGCACTGT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGATCATCTAATCCTATaGCTCTTGAGTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTADHLIL*LLSGFR
Trigger: CCTGAAACCACTCAAGAGTCATAGGATTAGATGATC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTGATCATCTAATCCTATaGCTCTTGAGTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: CEMAALLFPKLILEEVELDHLIL*LLSGFR
Trigger: CCTGAAACCACTCAAGAGTCATAGGATTAGATGATC...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAATTTATTTACTTTGCTaGCTGGCGCTGAAGCGTATC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVIYLLC*LALKRI
Trigger: GATACGCTTCAGCGCCAGTCAGCAAAGTAAATAAAT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCGAACAAGGGATTCTGTaGTTTCCATGCTCTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIEQGIL*FPCSQN
Trigger: GTTCTGAGAGCATGGAAATCACAGAATCCCTTGTTC...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGCTATGTTACACCTGTaGAGAGGTAATCCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVAMLHL*RGNPGD
Trigger: ATCACCTGGATTACCTCTTCACAGGTGTAACATAGC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTAGTGGTGTGCAGATGTaGAATGGCAGCACTGTTATT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVSGVQM*NGSTVI
Trigger: AATAACAGTGCTGCCATTTCACATCTGCACACCACT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGGGCCCTCTTTTTCTTaGGGTAATGAATTCCATGAG +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGGPSFS*GNEFHE
Trigger: CTCATGGAATTCATTACCTCAAGAAAAAGAGGGCCC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATATAGGATCATGATATaGGGTTTGAGAAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTYRIMI*GLRKGR
Trigger: TCTGCCCTTTCTCAAACCTCATATCATGATCCTATA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACTTCTCTCGACTCTCTaGTTTATCCAAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVLLSTL*FIQRQM
Trigger: CATTTGCCTTTGGATAAATCAGAGAGTCGAGAGAAG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGTTAAGAGGAAAGCCTaGCAATTGGGAAGGATCCAC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYVKRKA*QLGRIH
Trigger: GTGGATCCTTCCCAATTGTCAGGCTTTCCTCTTAAC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGTTTCTTTGCAAAACTaGGTTGGGCTGTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFVSLQN*VGLSKC
Trigger: GCATTTTGACAGCCCAACTCAGTTTTGCAAAGAAAC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCATTAAATGTTGTATCTaGGAAGGAGTCATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCIKCCI*EGVMQV
Trigger: TACCTGCATGACTCCTTCTCAGATACAACATTTAAT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGTCTCATCCCTGATTTaGAGCACTTCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYVSSLI*STSSVV
Trigger: CACAACAGAGGAAGTGCTTCAAATCAGGGATGAGAC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGTCTCATCCCTGATTTaGAGCACTTCCTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKVSSLI*STSSVV
Trigger: CACAACAGAGGAAGTGCTTCAAATCAGGGATGAGAC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAAAATCAAGAATTCCTTaGCACACAAGAGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTKSRIP*HTRDSC
Trigger: GCAGGAATCTCTTGTGTGTCAAGGAATTCTTGATTT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATATGCTCTTCTTCATCTTaGCTAGACAGTCCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWICSSSS*LDSPEK
Trigger: TTTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCA...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTGCTCTTCTTCATCTTaGCTAGACAGTCCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYCSSSS*LDSPEK
Trigger: TTTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTTCCAGCAAACCACATaGCATCAGTGTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVFQQTT*HQCFSI
Trigger: GATGCTGAAACACTGATGTCATGTGGTTTGCTGGAA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCAAAACACCAAACTTaGGTGTTTCCAGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGPKHQT*VFPANH
Trigger: GTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGG...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTTTGTAGTTGGCTTCTaGCATGTCCAGGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYFVVGF*HVQVRA
Trigger: GGCTCTAACCTGGACATGTCAGAAGCCAACTACAAA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTCTTTCCTAAAGGCCTaGAGTGTCTCAGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVSFLKA*SVSESS
Trigger: ACTGGATTCTGAGACACTTCAGGCCTTTAGGAAAGA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCTTGATGCGTATAGCTaGCTGCATGTTCATGTGGAT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVLDAYS*LHVHVD
Trigger: ATCCACATGAACATGCAGTCAGCTATACGCATCAAG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACTTTTAGGCATGCTCTaGGACGTTATCACCAAACAT +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVLLGML*DVITKH
Trigger: ATGTTTGGTGATAACGTCTCAGAGCATGCCTAAAAG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATATAAAGCCAATGAATaGTTCTTTCTCGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQYKANE*FFLELS
Trigger: ACTGAGCTCGAGAAAGAAGCATTCATTGGCTTTATA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp GAAATGTCAATTTCTTCGTTTTCGGAAGCGGACTCAGCTTCTTTGAGGATACTTTCACCATCTTTCTGCTaGAAACTGTCTGCTATTACA +
Preference number: 4 (lower is better)
Translates to: EMSISSFSEADSASLRILSPSFC*KLSAIT
Trigger: TGTAATAGCAGACAGTTTGCAGCAGAAAGATGGTGA...AAGTATCCTCAAAGAAGCTGAGTCCGCTTCCGAAAACGAAGAAATTGACATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGGTTCACCATCTTTCTaGTGCAAACTGTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFGSPSF*CKLSAI
Trigger: AATAGCAGACAGTTTGCAGCAGAAAGATGGTGAACC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTTCCTTATTAGACATCTaGACACTGGTCATACACATT +
Preference number: 4 (lower is better)
Translates to: YTSDCSKPLQWLVEIPILSLLDI*TLVIHI
Trigger: AATGTGTATGACCAGTGTGCAGATGTCTAATAAGGA...AAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACAATCAGGTCAGTTCTaGTCATACCGTCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKQSGQF*SYRQES
Trigger: TGATTCCTGACGGTATGAGCAGAACTGACCTGATTG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACTGAAGTCTTGTGTATaGAAACATCCAAGCATAGCT +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTLKSCV*KHPSIA
Trigger: AGCTATGCTTGGATGTTTGCATACACAAGACTTCAG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACAATGTATGAGTCACTaGTTGTGGTGGTATTTACTT +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQQCMSH*LWWYLL
Trigger: AAGTAAATACCACCACAAGCAGTGACTCATACATTG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTGATGCTAAAAGGACCTaGCCAGTGACTGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSDAKRT*PVTEQH
Trigger: ATGCTGTTCAGTCACTGGGCAGGTCCTTTTAGCATC...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTAAGTCCTACATTATCTaGAACAGGGCCACAACACAG +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGKSYII*NRATTQ
Trigger: CTGTGTTGTGGCCCTGTTGCAGATAATGTAGGACTT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACAAGATCCTCCAGAGCTaGTACTGTATCGGGATTCTA +
Preference number: 4 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNKILQS*YCIGIL
Trigger: TAGAATCCCGATACAGTAGCAGCTCTGGAGGATCTT...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTAAGATCCTCCAGAGCTaGTACTGTATCGGGATTCTA +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVKILQS*YCIGIL
Trigger: TAGAATCCCGATACAGTAGCAGCTCTGGAGGATCTT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAAGTCAAAAGGATCACTaGTATGTTACACCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKSQKDH*YVTPVK
Trigger: CTTCACAGGTGTAACATAGCAGTGATCCTTTTGACT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATTGAGGATAGTGGTGTaGAGATGTGAAATGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKLRIVV*RCEMAA
Trigger: TGCTGCCATTTCACATCTGCACACCACTATCCTCAA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATATTGACTTTTCCATCCTaGTCCACTGAGATGTCAACC +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWILTFPS*STEMST
Trigger: GGTTGACATCTCAGTGGAGCAGGATGGAAAAGTCAA...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACCTTCTGAGCTTGACTaGTTAAAAACAGAAACCACA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKPSELD*LKTETT
Trigger: TGTGGTTTCTGTTTTTAAGCAGTCAAGCTCAGAAGG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCAGGAAAGTGCTGTTTaGAGAGCAACTTCACTAAGA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFQESAV*RATSLR
Trigger: TCTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCAGCCAAAGTATCAATTaGAGATTCCAATGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCSQSIN*RFQCEK
Trigger: CTTCTCACATTGGAATCTGCAATTGATACTTTGGCT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATCCTTGCTAAACTACTaGTATGGTTTATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKSLLNY*YGLSVH
Trigger: ATGGACGGATAAACCATAGCAGTAGTTTAGCAAGGA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGGCTCAGTAGTGGACTaGACGTCATACATTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKGSVVD*TSYIPF
Trigger: GAAAGGAATGTATGACGTGCAGTCCACTACTGAGCC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATAGTTTACTGAGGAGGTaGACGGTCATTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNSLLRR*TVISCV
Trigger: TACACAAGAAATGACCGTGCACCTCCTCAGTAAACT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAAGTTTACTGAGGAGGTaGACGGTCATTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVSLLRR*TVISCV
Trigger: TACACAAGAAATGACCGTGCACCTCCTCAGTAAACT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTCAAACTCATCATGTGTaGCAGATTGACAAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CEMAALLFPKLILEEVELQTHHV*QIDKCW
Trigger: CCAACACTTGTCAATCTGGCACACATGATGAGTTTG...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACAAACTCATCATGTGTaGCAGATTGACAAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVQTHHV*QIDKCW
Trigger: CCAACACTTGTCAATCTGGCACACATGATGAGTTTG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTGTAGTAATGATTGCTaGATACTGGACAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCCSNDC*ILDNPF
Trigger: GAAAGGATTGTCCAGTATGCAGCAATCATTACTACA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGATCTGTAGTAATGATTaGTGCATACTGGACAATCCT +
Preference number: 4 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEICSND*CILDNP
Trigger: AGGATTGTCCAGTATGCAGCAATCATTACTACAGAT...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTGTTTAACATCTGTGTaGGTGAGAGTATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNCLTSV*VRVSGL
Trigger: CAAGCCAGATACTCTCACGCACACAGATGTTAAACA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAATGAAAAGTAAACACTaGAGAGGACCCGTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKMKSKH*RGPVGV
Trigger: GACACCGACGGGTCCTCTGCAGTGTTTACTTTTCAT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAACCAAGAAAGCTGACTaGCTCATTAGTTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKTKKAD*LISYFS
Trigger: GGAGAAATAACTAATGAGGCAGTCAGCTTTCTTGGT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGGTATGATTGCACCATaGGTAGAGACTCTCTTATTT +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKGMIAP*VETLLF
Trigger: AAATAAGAGAGTCTCTACGCATGGTGCAATCATACC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAGAAGTTGGTATGATTaGACCATGCGTAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTARSWYD*TMRRDS
Trigger: AGAGTCTCTACGCATGGTGCAATCATACCAACTTCT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CGTAACCAGCGCCTACTAGTCACCATAAGTTCTCGGTCTTTTAAGGAATCATCTAAAATCAATGGTTTTTaGAAACGAGTCTTGATGCGT +
Preference number: 4 (lower is better)
Translates to: RNQRLLVTISSRSFKESSKINGF*KRVLMR
Trigger: ACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT...AGATGATTCCTTAAAAGACCGAGAACTTATGGTGACTAGTAGGCGCTGGTTACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATCAATGGTGTGCACAGTaGCTTCAATTAATGCACTTG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNQWCAQ*LQLMHL
Trigger: CAAGTGCATTAATTGAAGGCACTGTGCACACCATTG...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAGCAGTCCAATGGTGTaGACAGTGCCTTCAATTAAT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFSSPMV*TVPSIN
Trigger: ATTAATTGAAGGCACTGTGCACACCATTGGACTGCT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTCTTCCGTTCCATTTTaGCGTCTGTACCAGTCAAAC +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYSSVPF*RLYQSN
Trigger: GTTTGACTGGTACAGACGCCAAAATGGAACGGAAGA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATAATAACTCCTGTTGTTaGCATGGGTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYNNSCC*HGWFTI
Trigger: GATGGTGAACCACCCATGCCAACAACAGGAGTTATT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACGTCAGGAATCAACCTTaGAATCGCAGCAATACAAGT +
Preference number: 4 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDVRNQP*NRSNTS
Trigger: ACTTGTATTGCTGCGATTCCAAGGTTGATTCCTGAC...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTCAAGAAGTGTGGGATaGACATCAGTCACTTCACGA +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGSRSVG*TSVTSR
Trigger: TCGTGAAGTGACTGATGTCCATCCCACACTTCTTGA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACTAATCACATCAAACTaGTGGCTAATAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKLITSN*WLIGEE
Trigger: CTCTTCTCCTATTAGCCACCAGTTTGATGTGATTAG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGAGACTTATAATCCATaGGTCTTGGCCTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKETYNP*VLALGH
Trigger: GTGACCCAAGGCCAAGACCCATGGATTATAAGTCTC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCAGAACCTGCAGATGTaGAAGATGACGATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSQNLQM*KMTMLL
Trigger: CAGCAACATCGTCATCTTCCACATCTGCAGGTTCTG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCCGTTTCATATTCTCTaGCCTTCTTTCGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVPFHIL*PSFECF
Trigger: GAAGCACTCGAAAGAAGGCCAGAGAATATGAAACGG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGACTAAGGCACTAAAATaGCATCGTATATCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEETKALK*HRISFS
Trigger: ACTGAAGGATATACGATGCCATTTTAGTGCCTTAGT...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTCAAAACCATTGCAGTaGCTTGTGGAGATCCCCATC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYSKPLQ*LVEIPI
Trigger: GATGGGGATCTCCACAAGCCACTGCAATGGTTTTGA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTACCTCAGGGTGGCAGTaGTCAAACCCTATAAAAATT +
Preference number: 4 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSTSGWQ*SNPIKI
Trigger: AATTTTTATAGGGTTTGACCACTGCCACCCTGAGGT...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGTGGAATCTTCAGACTaGAGAAGTAAGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKVESSD*RSKSGW
Trigger: CCATCCTGACTTACTTCTCCAGTCTGAAGATTCCAC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCGACGTCTGTACTTCTaGAAAACCATCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLRRLYF*KTILLF
Trigger: GAAGAGCAAGATGGTTTTCCAGAAGTACAGACGTCG...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATATACATGTCTTCTTTaGCACCAAATGTCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQYTCLL*HQMSSY
Trigger: GTAAGAGGACATTTGGTGCCAAAGAAGACATGTATA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCAGGATACTTTCCAGTTaGGCAAGTTCCTCTGACATG +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIRILSS*ASSSDM
Trigger: CATGTCAGAGGAACTTGCCCAACTGGAAAGTATCCT...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCCATCAGTTTGTAGTTaGCTTCTGACATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVPSVCS*LLTCPG
Trigger: ACCTGGACATGTCAGAAGCCAACTACAAACTGATGG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTGCCTGTGCTAGAAGTTaGTATGATTGCACCATGCGT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSACARS*YDCTMR
Trigger: ACGCATGGTGCAATCATACCAACTTCTAGCACAGGC...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTTCACGCAGTTATTGTaGGAGATATTGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFFTQLL*EILAAV
Trigger: AACAGCTGCCAATATCTCCCACAATAACTGCGTGAA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTGGTTGTTTCAGTATTaGAGGCCATTATTGCAAACA +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCWLFQY*RPLLQT
Trigger: TGTTTGCAATAATGGCCTCCAATACTGAAACAACCA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGCATGTTCATGTGGATaGATGATTAAGCATCAATTG +
Preference number: 4 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEACSCG*MIKHQL
Trigger: CAATTGATGCTTAATCATCCATCCACATGAACATGC...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACACAAACCTGACAATTaGGAAGGATCCACCAATGTA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVHKPDN*EGSTNV
Trigger: TACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
3UTR CAA 72 bp TCTGATTTATCCAAAGGCAAATGGATAAGCAGTTTGTaGAGAAGCCTGAGAGCCAGGAGGTATTCATATTCA +
Preference number: 4 (lower is better)
Translates to: SDLSKGKWISSL*RSLRARRYSYS
Trigger: TGAATATGAATACCTCCTGGCTCTCAGGCTTCTCAACAAACTGCTTATCCATTTGCCTTTGGATAAATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGACAGTAATTTCTTGGTaGCTTGGATCATCTAATCCT +
Preference number: 4 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLTVISW*LGSSNP
Trigger: AGGATTAGATGATCCAAGTCACCAAGAAATTACTGT...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATCTGAAGCGTATCACTTaGGACAGTAATTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYLKRIT*DSNFLV
Trigger: CACCAAGAAATTACTGTCTCAAGTGATACGCTTCAG...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATAAGTTTAGAACTTCATaGACTAAGGGATCGGGTACA +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNKFRTS*TKGSGT
Trigger: TGTACCCGATCCCTTAGTTCATGAAGTTCTAAACTT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTACAGCCTGAAACTTTaGTTGGGCAAGAACCCCTAT +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYYSLKL*LGKNPY
Trigger: ATAGGGGTTCTTGCCCAATCAAAGTTTCAGGCTGTA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATTCTTCCTTACAGCCTaGAACTTTGATTGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKFFLTA*NFDWAR
Trigger: TCTTGCCCAATCAAAGTTTCAGGCTGTAAGGAAGAA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTCTTCACAAATATATTaGGAGGTGTGTCACGAGGAA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTASSQIY*EVCHEE
Trigger: TTCCTCGTGACACACCTCTCAATATATTTGTGAAGA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAAAATAAACAAATCCTaGAAGAACATCCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFKINKS*KNILPP
Trigger: TGGCGGGAGGATGTTCTTTCAGGATTTGTTTATTTT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATACCTAAATATACAATaGCCTTCTTCACGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTYLNIQ*PSSRKA
Trigger: TGCCTTACGTGAAGAAGGTCATTGTATATTTAGGTA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR TCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATACCTAAATATACAATaGCCTTCTTCACGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKYLNIQ*PSSRKA
Trigger: TGCCTTACGTGAAGAAGGTCATTGTATATTTAGGTA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATTTTATAGCTGGAAGTaGTGCGATAATACGGGGGAT +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKFYSWK*CDNTGD
Trigger: ATCCCCCGTATTATCGCATCACTTCCAGCTATAAAA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTTTATAGCTGGAAGTaGTGCGATAATACGGGGGAT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGFYSWK*CDNTGD
Trigger: ATCCCCCGTATTATCGCATCACTTCCAGCTATAAAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTTTTATAGCTGGAAGTaGTGCGATAATACGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLFYSWK*CDNTGD
Trigger: ATCCCCCGTATTATCGCATCACTTCCAGCTATAAAA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACTCCACCTTCACACTATaGTCAATGATGAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNSTFTL*SMMRSV
Trigger: GACTGATCTCATCATTGATCATAGTGTGAAGGTGGA...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTCCACCTTCACACTATaGTCAATGATGAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGSTFTL*SMMRSV
Trigger: GACTGATCTCATCATTGATCATAGTGTGAAGGTGGA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGTGGTGTGCAGATGTaGAATGGCAGCACTGTTATT +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYSGVQM*NGSTVI
Trigger: AATAACAGTGCTGCCATTTCACATCTGCACACCACT...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATCTTCTCTCGACTCTCTaGTTTATCCAAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYLLSTL*FIQRQM
Trigger: CATTTGCCTTTGGATAAATCAGAGAGTCGAGAGAAG...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAAATGCTGGATTAAGTaGGGCAATAAGCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAKCWIK*GNKQRM
Trigger: CATCCTTTGCTTATTGCCTCACTTAATCCAGCATTT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCGTTTCTTTGCAAAACTaGGTTGGGCTGTCAAAATGC +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIVSLQN*VGLSKC
Trigger: GCATTTTGACAGCCCAACTCAGTTTTGCAAAGAAAC...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTCATGTGTGCCAGATTaGCAAGTGTTGGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIISCVPD*QVLGIF
Trigger: AAAAATGCCCAACACTTGTCAATCTGGCACACATGA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTCATGTGTGCCAGATTaGCAAGTGTTGGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYSCVPD*QVLGIF
Trigger: AAAAATGCCCAACACTTGTCAATCTGGCACACATGA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCCAAAACACCAAACTTaGGTGTTTCCAGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYPKHQT*VFPANH
Trigger: GTGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCCAGAAAGTTATCAGTaGATGCAAGGGTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAPESYQ*MQGSIK
Trigger: TTTTATGGACCCTTGCATTCACTGATAACTTTCTGG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAAAATGAAACAGCCTTaGTTTCAGCCTCATTTCACC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFKMKQP*FQPHFT
Trigger: GGTGAAATGAGGCTGAAATCAAGGCTGTTTCATTTT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCCTTTTAGGCATGCTCTaGGACGTTATCACCAAACAT +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRILLGML*DVITKH
Trigger: ATGTTTGGTGATAACGTCTCAGAGCATGCCTAAAAG...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTACAGTGATTATGAATaGGCTGTGACCAGTTACGAA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAYSDYE*AVTSYE
Trigger: TTCGTAACTGGTCACAGCTCATTCATAATCACTGTA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGAACAGCAAATTCTaGAAAGAGGCTCTTGATGAC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVLNSKF*KEALDD
Trigger: GTCATCAAGAGCCTCTTTGCAGAATTTGCTGTTCAA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCTGCTGCAAACTGTCTaGTATTACAAGGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLLQTV*YYKEDS
Trigger: AGAGTCTTCCTTGTAATAGCAGACAGTTTGCAGCAG...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATCTGCTGCAAACTGTCTaGTATTACAAGGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYLLQTV*YYKEDS
Trigger: AGAGTCTTCCTTGTAATAGCAGACAGTTTGCAGCAG...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGGTTCACCATCTTTCTaGTGCAAACTGTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKGSPSF*CKLSAI
Trigger: AATAGCAGACAGTTTGCAGCAGAAAGATGGTGAACC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGATCATTGGAACTATGTaGTTAAACAAGGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLIIGTM*LNKDEG
Trigger: CCCTTCATCCTTGTTTAAGCACATAGTTCCAATGAT...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTAATGACACCAGCATCTaGCAGCAGTTCAAATATTCG +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLNDTSI*QQFKYS
Trigger: CGAATATTTGAACTGCTGGCAGATGCTGGTGTCATT...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAATTGTTCAAAACCATTaGAGTGGCTTGTGGAGATCC +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIIVQNH*SGLWRS
Trigger: GGATCTCCACAAGCCACTGCAATGGTTTTGAACAAT...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTTCATCGCCATACTTTaGTGTCATATACATCAGATT +
Preference number: 4 (lower is better)
Translates to: KVDAARKLSVNARVHKRCFIAIL*CHIHQI
Trigger: AATCTGATGTATATGACAGCAAAGTATGGCGATGAA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGCTTATTATCAGGATTaGCATCTGTGGGAGCTACCA +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKAYYQD*HLWELP
Trigger: TGGTAGCTCCCACAGATGGCAATCCTGATAATAAGC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTAAGATCCTCCAGAGCTaGTACTGTATCGGGATTCTA +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSKILQS*YCIGIL
Trigger: TAGAATCCCGATACAGTAGCAGCTCTGGAGGATCTT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTGACTTTTCCATCCTaGTCCACTGAGATGTCAACC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKLTFPS*STEMST
Trigger: GGTTGACATCTCAGTGGAGCAGGATGGAAAAGTCAA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATACAGGAAAGTGCTGTTTaGAGAGCAACTTCACTAAGA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIQESAV*RATSLR
Trigger: TCTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTG...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAAGTTTACTGAGGAGGTaGACGGTCATTTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWISLLRR*TVISCV
Trigger: TACACAAGAAATGACCGTGCACCTCCTCAGTAAACT...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTGGGCATTTTTCTTCTaGACAAACCTTTGCTATTCG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAWAFFF*TNLCYS
Trigger: CGAATAGCAAAGGTTTGTGCAGAAGAAAAATGCCCA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCAAACTCATCATGTGTaGCAGATTGACAAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVQTHHV*QIDKCW
Trigger: CCAACACTTGTCAATCTGGCACACATGATGAGTTTG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACAAACTCATCATGTGTaGCAGATTGACAAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKQTHHV*QIDKCW
Trigger: CCAACACTTGTCAATCTGGCACACATGATGAGTTTG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACAAACTGTTGTTCACTaGTATTATCTTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTQTVVH*YYLPQL
Trigger: TAGCTGTGGAAGATAATAGCAGTGAACAACAGTTTG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCATACTTTCACCCTCTaGATCTTCCAATTCAACATC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFHTFTL*IFQFNI
Trigger: GATGTTGAATTGGAAGATGCAGAGGGTGAAAGTATG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTGTTTAACATCTGTGTaGGTGAGAGTATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIICLTSV*VRVSGL
Trigger: CAAGCCAGATACTCTCACGCACACAGATGTTAAACA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATGTTTAACATCTGTGTaGGTGAGAGTATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKCLTSV*VRVSGL
Trigger: CAAGCCAGATACTCTCACGCACACAGATGTTAAACA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTTGGTACCAATGCGTTaGAGACTATCACCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYLVPMR*RLSPRK
Trigger: CTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTGGTACCAATGCGTTaGAGACTATCACCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLVPMR*RLSPRK
Trigger: CTTTCTTGGTGATAGTCTGCAACGCATTGGTACCAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGTATCCAGGTGTTCTTaGAACTCCAAAACACCAAAC +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLVSRCS*NSKTPN
Trigger: GTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATAC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTGGTATGATTGCACCATaGGTAGAGACTCTCTTATTT +
Preference number: 4 (lower is better)
Translates to: CEMAALLFPKLILEEVELGMIAP*VETLLF
Trigger: AAATAAGAGAGTCTCTACGCATGGTGCAATCATACC...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATAAATCCAAGCAGCTTTaGAGGTCTTCAGCTAAAATG +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNKSKQL*RSSAKM
Trigger: CATTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTATGCGTATAGCTGACTaGATGTTCATGTGGATGGAT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVMRIAD*MFMWMD
Trigger: ATCCATCCACATGAACATGCAGTCAGCTATACGCAT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGCAGACTTCAAAGCCTaGAAGTCATATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNADFKA*KSYIPS
Trigger: TGATGGAATATATGACTTGCAGGCTTTGAAGTCTGC...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTACTTTGTACCACATGTaGGCTTTGTTCCTTTTGTCG +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLTLYHM*ALFLLS
Trigger: CGACAAAAGGAACAAAGCCCACATGTGGTACAAAGT...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATACTTTGTACCACATGTaGGCTTTGTTCCTTTTGTCG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYTLYHM*ALFLLS
Trigger: CGACAAAAGGAACAAAGCCCACATGTGGTACAAAGT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATACCACATGGAATACATTaGAATATGGGCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIPHGIH*NMGSFP
Trigger: TGGAAAGGAGCCCATATTCCAATGTATTCCATGTGG...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTGTCCATCACATCTATaGCTAATTCATCATCACCCT +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTACPSHL*LIHHHP
Trigger: AGGGTGATGATGAATTAGCCATAGATGTGATGGACA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTCTCAGAACGCATCATTaGAACTATGTGCTTAAACAA +
Preference number: 4 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVLRTHH*NYVLKQ
Trigger: TTGTTTAAGCACATAGTTCCAATGATGCGTTCTGAG...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGCTGTCTGGATTCTCTaGCTTATCTCTGAGAATATG +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVAVWIL*LISENM
Trigger: CATATTCTCAGAGATAAGCCAGAGAATCCAGACAGC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCACCTCAGGGTGGCAGTaGTCAAACCCTATAAAAATT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIITSGWQ*SNPIKI
Trigger: AATTTTTATAGGGTTTGACCACTGCCACCCTGAGGT...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAACCTCAGGGTGGCAGTaGTCAAACCCTATAAAAATT +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWITSGWQ*SNPIKI
Trigger: AATTTTTATAGGGTTTGACCACTGCCACCCTGAGGT...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTGTGCAGATGTGAAATaGCAGCACTGTTATTTCCTA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTACADVK*QHCYFL
Trigger: TAGGAAATAACAGTGCTGCCATTTCACATCTGCACA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTTGCAAAACTGAGTTaGGCTGTCAAAATGCTGGAT +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVFAKLS*AVKMLD
Trigger: ATCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAATGATTGCTGCATACTaGACAATCCTTTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKMIAAY*TILSLT
Trigger: TGTTAGAGAAAGGATTGTCCAGTATGCAGCAATCAT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAATGATTGCTGCATACTaGACAATCCTTTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTMIAAY*TILSLT
Trigger: TGTTAGAGAAAGGATTGTCCAGTATGCAGCAATCAT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGTGGAATCTTCAGACTaGAGAAGTAAGTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYVESSD*RSKSGW
Trigger: CCATCCTGACTTACTTCTCCAGTCTGAAGATTCCAC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACGACGTCTGTACTTCTaGAAAACCATCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKRRLYF*KTILLF
Trigger: GAAGAGCAAGATGGTTTTCCAGAAGTACAGACGTCG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATATACATGTCTTCTTTaGCACCAAATGTCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKYTCLL*HQMSSY
Trigger: GTAAGAGGACATTTGGTGCCAAAGAAGACATGTATA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTAGGATACTTTCCAGTTaGGCAAGTTCCTCTGACATG +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSRILSS*ASSSDM
Trigger: CATGTCAGAGGAACTTGCCCAACTGGAAAGTATCCT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGGATACTTTCCAGTTaGGCAAGTTCCTCTGACATG +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYRILSS*ASSSDM
Trigger: CATGTCAGAGGAACTTGCCCAACTGGAAAGTATCCT...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCCATCAGTTTGTAGTTaGCTTCTGACATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSPSVCS*LLTCPG
Trigger: ACCTGGACATGTCAGAAGCCAACTACAAACTGATGG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTTCACGCAGTTATTGTaGGAGATATTGGCAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIFTQLL*EILAAV
Trigger: AACAGCTGCCAATATCTCCCACAATAACTGCGTGAA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCATTTCACCTGCTTTTaGTTGTTTCAGTATTGGAGG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFHFTCF*LFQYWR
Trigger: CCTCCAATACTGAAACAACCAAAAGCAGGTGAAATG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGCATGTTCATGTGGATaGATGATTAAGCATCAATTG +
Preference number: 4 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTACSCG*MIKHQL
Trigger: CAATTGATGCTTAATCATCCATCCACATGAACATGC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
3UTR CAA 72 bp TCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATaGGAGGCCATTATTGCAAACATTCTTGGAATTCTT +
Preference number: 4 (lower is better)
Translates to: SASFHLLLVVSV*EAIIANILGIL
Trigger: AAGAATTCCAAGAATGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCACAGTAATTTCTTGGTaGCTTGGATCATCTAATCCT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFTVISW*LGSSNP
Trigger: AGGATTAGATGATCCAAGTCACCAAGAAATTACTGT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCAAGTTTAGAACTTCATaGACTAAGGGATCGGGTACA +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIKFRTS*TKGSGT
Trigger: TGTACCCGATCCCTTAGTTCATGAAGTTCTAAACTT...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTTACAAGGAAGACTCTaGGACCTATGTTCATTCTCT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLLQGRL*DLCSFS
Trigger: AGAGAATGAACATAGGTCTCAGAGTCTTCCTTGTAA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTAAACTGACATTCCTATaGCTTTTGCTTCTTCATCTG +
Preference number: 4 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSKLTFL*LLLLHL
Trigger: CAGATGAAGAAGCAAAAGTCATAGGAATGTCAGTTT...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTTGAGGATAGTAAACTaGCATTCCTATGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNLRIVN*HSYDFC
Trigger: GCAAAAGTCATAGGAATGTCAGTTTACTATCCTCAA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR TCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGCTGCTTGTTTCCACTaGTTTATTAATTGTACCAAC +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAAACFH*FINCTN
Trigger: GTTGGTACAATTAATAAATCAGTGGAAACAAGCAGC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCGCTGCTTGTTTCCACTaGTTTATTAATTGTACCAAC +
Preference number: 4 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAAACFH*FINCTN
Trigger: GTTGGTACAATTAATAAATCAGTGGAAACAAGCAGC...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACTGCACTGGAACATTCTaGATAATATTCGCCACTAAG +
Preference number: 4 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNCTGTF*IIFATK
Trigger: CTTAGTGGCGAATATTATTCAGAATGTTCCAGTGCA...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTCCACCTTCACACTATaGTCAATGATGAGATCAGTC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYSTFTL*SMMRSV
Trigger: GACTGATCTCATCATTGATCATAGTGTGAAGGTGGA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATATAGGATCATGATATaGGGTTTGAGAAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKYRIMI*GLRKGR
Trigger: TCTGCCCTTTCTCAAACCTCATATCATGATCCTATA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTATAGGATCATGATATaGGGTTTGAGAAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGYRIMI*GLRKGR
Trigger: TCTGCCCTTTCTCAAACCTCATATCATGATCCTATA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTATAGGATCATGATATaGGGTTTGAGAAAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYYRIMI*GLRKGR
Trigger: TCTGCCCTTTCTCAAACCTCATATCATGATCCTATA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTCTTGTGTAGATGCTaGGGTAAAACCCTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGFLCRC*GKTLKE
Trigger: TTCCTTAAGGGTTTTACCTCAGCATCTACACAAGAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTTCTTGTGTAGATGCTaGGGTAAAACCCTTAAGGAA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYFLCRC*GKTLKE
Trigger: TTCCTTAAGGGTTTTACCTCAGCATCTACACAAGAA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGAACCAGAAGAAGTTaGGGAAGTACTTCTAGTGAC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYRTRRS*GSTSSD
Trigger: GTCACTAGAAGTACTTCCTCAACTTCTTCTGGTTCT...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAATCAAGAATTCCTTaGCACACAAGAGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKKSRIP*HTRDSC
Trigger: GCAGGAATCTCTTGTGTGTCAAGGAATTCTTGATTT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTAAATCAAGAATTCCTTaGCACACAAGAGATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLKSRIP*HTRDSC
Trigger: GCAGGAATCTCTTGTGTGTCAAGGAATTCTTGATTT...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATACCAGAAAGTTATCAGTaGATGCAAGGGTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIPESYQ*MQGSIK
Trigger: TTTTATGGACCCTTGCATTCACTGATAACTTTCTGG...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATCCAGAAAGTTATCAGTaGATGCAAGGGTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYPESYQ*MQGSIK
Trigger: TTTTATGGACCCTTGCATTCACTGATAACTTTCTGG...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCAAAATGAAACAGCCTTaGTTTCAGCCTCATTTCACC +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIKMKQP*FQPHFT
Trigger: GGTGAAATGAGGCTGAAATCAAGGCTGTTTCATTTT...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTAAAATGAAACAGCCTTaGTTTCAGCCTCATTTCACC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGKMKQP*FQPHFT
Trigger: GGTGAAATGAGGCTGAAATCAAGGCTGTTTCATTTT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCCCTTATCCCACATACTaGAAAATCAATGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFPYPTY*KINGFC
Trigger: GCAAAAACCATTGATTTTTCAGTATGTGGGATAAGG...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCTTTTAGGCATGCTCTaGGACGTTATCACCAAACAT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSLLGML*DVITKH
Trigger: ATGTTTGGTGATAACGTCTCAGAGCATGCCTAAAAG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATCTAATGAGAATAGCTaGCAGGCAGCATACATCTTT +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKSNENS*QAAYIF
Trigger: AAAGATGTATGCTGCCTGTCAGCTATTCTCATTAGA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTCTAATGAGAATAGCTaGCAGGCAGCATACATCTTT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIISNENS*QAAYIF
Trigger: AAAGATGTATGCTGCCTGTCAGCTATTCTCATTAGA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAATAGGATGTAAAGTGTaGTGTATCTCTGGACACCAT +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIIGCKV*CISGHH
Trigger: ATGGTGTCCAGAGATACATCACACTTTACATCCTAT...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCATAGGATGTAAAGTGTaGTGTATCTCTGGACACCAT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIIGCKV*CISGHH
Trigger: ATGGTGTCCAGAGATACATCACACTTTACATCCTAT...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTCACCATCTTTCTGCTaGAAACTGTCTGCTATTACA +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLSPSFC*KLSAIT
Trigger: TGTAATAGCAGACAGTTTGCAGCAGAAAGATGGTGA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTCAATGTATGAGTCACTaGTTGTGGTGGTATTTACTT +
Preference number: 4 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSQCMSH*LWWYLL
Trigger: AAGTAAATACCACCACAAGCAGTGACTCATACATTG...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAATGACACCAGCATCTaGCAGCAGTTCAAATATTCG +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYNDTSI*QQFKYS
Trigger: CGAATATTTGAACTGCTGGCAGATGCTGGTGTCATT...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTAGCTCTTCTAGCAACTaGATTGTTTTATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSSSSSN*IVLSLP
Trigger: AGGTAGAGATAAAACAATGCAGTTGCTAGAAGAGCT...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTAGTCAAAAGGATCACTaGTATGTTACACCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVSQKDH*YVTPVK
Trigger: CTTCACAGGTGTAACATAGCAGTGATCCTTTTGACT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCCCTTCTGAGCTTGACTaGTTAAAAACAGAAACCACA +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIPSELD*LKTETT
Trigger: TGTGGTTTCTGTTTTTAAGCAGTCAAGCTCAGAAGG...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACCTTCTGAGCTTGACTaGTTAAAAACAGAAACCACA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKPSELD*LKTETT
Trigger: TGTGGTTTCTGTTTTTAAGCAGTCAAGCTCAGAAGG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACAGGAAAGTGCTGTTTaGAGAGCAACTTCACTAAGA +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKQESAV*RATSLR
Trigger: TCTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAGCCAAAGTATCAATTaGAGATTCCAATGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFSQSIN*RFQCEK
Trigger: CTTCTCACATTGGAATCTGCAATTGATACTTTGGCT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTCCTTGCTAAACTACTaGTATGGTTTATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGSLLNY*YGLSVH
Trigger: ATGGACGGATAAACCATAGCAGTAGTTTAGCAAGGA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCTCCTTGCTAAACTACTaGTATGGTTTATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRISLLNY*YGLSVH
Trigger: ATGGACGGATAAACCATAGCAGTAGTTTAGCAAGGA...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATATGGGCATTTTTCTTCTaGACAAACCTTTGCTATTCG +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIWAFFF*TNLCYS
Trigger: CGAATAGCAAAGGTTTGTGCAGAAGAAAAATGCCCA...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTTGTAGTAATGATTGCTaGATACTGGACAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: CEMAALLFPKLILEEVELCSNDC*ILDNPF
Trigger: GAAAGGATTGTCCAGTATGCAGCAATCATTACTACA...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR GCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTATCTGTAGTAATGATTaGTGCATACTGGACAATCCT +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAICSND*CILDNP
Trigger: AGGATTGTCCAGTATGCAGCAATCATTACTACAGAT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATCAAACTGTTGTTCACTaGTATTATCTTCCACAGCTA +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNQTVVH*YYLPQL
Trigger: TAGCTGTGGAAGATAATAGCAGTGAACAACAGTTTG...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCATACTTTCACCCTCTaGATCTTCCAATTCAACATC +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLHTFTL*IFQFNI
Trigger: GATGTTGAATTGGAAGATGCAGAGGGTGAAAGTATG...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATACCAAGAAAGCTGACTaGCTCATTAGTTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYTKKAD*LISYFS
Trigger: GGAGAAATAACTAATGAGGCAGTCAGCTTTCTTGGT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGTATCCAGGTGTTCTTaGAACTCCAAAACACCAAAC +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYVSRCS*NSKTPN
Trigger: GTTTGGTGTTTTGGAGTTGCAAGAACACCTGGATAC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGGTATGATTGCACCATaGGTAGAGACTCTCTTATTT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGGMIAP*VETLLF
Trigger: AAATAAGAGAGTCTCTACGCATGGTGCAATCATACC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAGAAGTTGGTATGATTaGACCATGCGTAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKRSWYD*TMRRDS
Trigger: AGAGTCTCTACGCATGGTGCAATCATACCAACTTCT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTAGAAGTTGGTATGATTaGACCATGCGTAGAGACTCT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSRSWYD*TMRRDS
Trigger: AGAGTCTCTACGCATGGTGCAATCATACCAACTTCT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATACAGCCTCATTTCACCTaGTTTTGGTTGTTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIQPHFT*FWLFQY
Trigger: ATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACAGCCTCATTTCACCTaGTTTTGGTTGTTTCAGTAT +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKQPHFT*FWLFQY
Trigger: ATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATAAATCCAAGCAGCTTTaGAGGTCTTCAGCTAAAATG +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYKSKQL*RSSAKM
Trigger: CATTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAAAATAATCTTGCAGTaGTCTTTTAGGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAKIILQ*SFRHAL
Trigger: CAGAGCATGCCTAAAAGAGCACTGCAAGATTATTTT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGCAGACTTCAAAGCCTaGAAGTCATATATTCCATCA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYADFKA*KSYIPS
Trigger: TGATGGAATATATGACTTGCAGGCTTTGAAGTCTGC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTCTTTTCTTGAATTCTaGAGACTTCAAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNSFLEF*RLQSLQ
Trigger: TTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTATCACATCAAACTGGTaGCTAATAGGAGAAGAGTTC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGITSNW*LIGEEF
Trigger: GAACTCTTCTCCTATTAGCCACCAGTTTGATGTGAT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACTAATCACATCAAACTaGTGGCTAATAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKLITSN*WLIGEE
Trigger: CTCTTCTCCTATTAGCCACCAGTTTGATGTGATTAG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACCTCAGAACGCATCATTaGAACTATGTGCTTAAACAA +
Preference number: 4 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDLRTHH*NYVLKQ
Trigger: TTGTTTAAGCACATAGTTCCAATGATGCGTTCTGAG...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTACCTCAGGGTGGCAGTaGTCAAACCCTATAAAAATT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSTSGWQ*SNPIKI
Trigger: AATTTTTATAGGGTTTGACCACTGCCACCCTGAGGT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTGTGCAGATGTGAAATaGCAGCACTGTTATTTCCTA +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLCADVK*QHCYFL
Trigger: TAGGAAATAACAGTGCTGCCATTTCACATCTGCACA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTGTGCAGATGTGAAATaGCAGCACTGTTATTTCCTA +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVCADVK*QHCYFL
Trigger: TAGGAAATAACAGTGCTGCCATTTCACATCTGCACA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGAGCTGCTGAAGTCCTaGAAAATTAGTCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYELLKS*KISPFQ
Trigger: TTGAAATGGACTAATTTTCCAGGACTTCAGCAGCTC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGAGCTGCTGAAGTCCTaGAAAATTAGTCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGELLKS*KISPFQ
Trigger: TTGAAATGGACTAATTTTCCAGGACTTCAGCAGCTC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTTTGCAAAACTGAGTTaGGCTGTCAAAATGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLFAKLS*AVKMLD
Trigger: ATCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTATGATTGCTGCATACTaGACAATCCTTTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAMIAAY*TILSLT
Trigger: TGTTAGAGAAAGGATTGTCCAGTATGCAGCAATCAT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCATGATTGCTGCATACTaGACAATCCTTTCTCTAACA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFMIAAY*TILSLT
Trigger: TGTTAGAGAAAGGATTGTCCAGTATGCAGCAATCAT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTGTATTGTTTCATCAGTaGCAGAATCACTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVVLFHQ*QNHCLT
Trigger: TGTTAAACAGTGATTCTGCCACTGATGAAACAATAC...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAAGAAGTAAGTCAGGATaGTCTGGTATTGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVRSKSG*SGIVSS
Trigger: TGATGAAACAATACCAGACCATCCTGACTTACTTCT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAGAAGTAAGTCAGGATaGTCTGGTATTGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFRSKSG*SGIVSS
Trigger: TGATGAAACAATACCAGACCATCCTGACTTACTTCT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATATACATGTCTTCTTTaGCACCAAATGTCCTCTTAC +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVYTCLL*HQMSSY
Trigger: GTAAGAGGACATTTGGTGCCAAAGAAGACATGTATA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATATTGTGGGAGATATTaGCAGCTGTTAAAATATCAG +
Preference number: 4 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKYCGRY*QLLKYQ
Trigger: CTGATATTTTAACAGCTGCCAATATCTCCCACAATA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCATTTCACCTGCTTTTaGTTGTTTCAGTATTGGAGG +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGHFTCF*LFQYWR
Trigger: CCTCCAATACTGAAACAACCAAAAGCAGGTGAAATG...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGCATGTTCATGTGGATaGATGATTAAGCATCAATTG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFACSCG*MIKHQL
Trigger: CAATTGATGCTTAATCATCCATCCACATGAACATGC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCTACATTCTAAACTCTaGAATCACAGAGCCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLHSKL*NHRAQF
Trigger: AAACTGGGCTCTGTGATTCCAGAGTTTAGAATGTAG...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCGCTGTCTGGATTCTCTaGCTTATCTCTGTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIAVWIL*LISVKV
Trigger: AACTTTTACAGAGATAAGCCAGAGAATCCAGACAGC...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACTTTGTCCAAATGTCTaGGGATGCTATCTAATGCTT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKLCPNV*GCYLML
Trigger: AAGCATTAGATAGCATCCTCAGACATTTGGACAAAG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCATCCATATGAATTGTaGGCCTTGCTAACAATTCAA +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVHPYEL*ALLTIQ
Trigger: TTGAATTGTTAGCAAGGCTCACAATTCATATGGATG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTAGTTCTTCATCCATATaGATTGTGAGCCTTGCTAAC +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSSSSSI*IVSLAN
Trigger: GTTAGCAAGGCTCACAATTCATATGGATGAAGAACT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGGACAACTGATAATATaGAACAGAATAGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLGQLII*NRIEMW
Trigger: CCACATCTCTATTCTGTTTCATATTATCAGTTGTCC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR TCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATATACCTAAATATACAATaGCCTTCTTCACGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIYLNIQ*PSSRKA
Trigger: TGCCTTACGTGAAGAAGGTCATTGTATATTTAGGTA...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAAATGCTGGATTAAGTaGGGCAATAAGCAAAGGATG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKKCWIK*GNKQRM
Trigger: CATCCTTTGCTTATTGCCTCACTTAATCCAGCATTT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTAAATGTTGTATCTaGGAAGGAGTCATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKIKCCI*EGVMQV
Trigger: TACCTGCATGACTCCTTCTCAGATACAACATTTAAT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATATTAAATGTTGTATCTaGGAAGGAGTCATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYIKCCI*EGVMQV
Trigger: TACCTGCATGACTCCTTCTCAGATACAACATTTAAT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAACCAGAAAGTTATCAGTaGATGCAAGGGTCCATAAAA +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKPESYQ*MQGSIK
Trigger: TTTTATGGACCCTTGCATTCACTGATAACTTTCTGG...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCTTATCCCACATACTaGAAAATCAATGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGPYPTY*KINGFC
Trigger: GCAAAAACCATTGATTTTTCAGTATGTGGGATAAGG...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACCCTTATCCCACATACTaGAAAATCAATGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNPYPTY*KINGFC
Trigger: GCAAAAACCATTGATTTTTCAGTATGTGGGATAAGG...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR TCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATACAGTGATTATGAATaGGCTGTGACCAGTTACGAA +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKYSDYE*AVTSYE
Trigger: TTCGTAACTGGTCACAGCTCATTCATAATCACTGTA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAATACAAAGATTCCAGTaGAACTCGAGACATTTTCGG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKIQRFQ*NSRHFR
Trigger: CCGAAAATGTCTCGAGTTGCACTGGAATCTTTGTAT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTCCTTATTAGACATCTaGACACTGGTCATACACATT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLSLLDI*TLVIHI
Trigger: AATGTGTATGACCAGTGTGCAGATGTCTAATAAGGA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR GCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCATCATTGGAACTATGTaGTTAAACAAGGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIIIGTM*LNKDEG
Trigger: CCCTTCATCCTTGTTTAAGCACATAGTTCCAATGAT...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR GCA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAGCTCTTCTAGCAACTaGATTGTTTTATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIISSSSN*IVLSLP
Trigger: AGGTAGAGATAAAACAATGCAGTTGCTAGAAGAGCT...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAGTCAAAAGGATCACTaGTATGTTACACCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSQKDH*YVTPVK
Trigger: CTTCACAGGTGTAACATAGCAGTGATCCTTTTGACT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTAGTCAAAAGGATCACTaGTATGTTACACCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSSQKDH*YVTPVK
Trigger: CTTCACAGGTGTAACATAGCAGTGATCCTTTTGACT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTAGCCAAAGTATCAATTaGAGATTCCAATGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGSQSIN*RFQCEK
Trigger: CTTCTCACATTGGAATCTGCAATTGATACTTTGGCT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTAGCCAAAGTATCAATTaGAGATTCCAATGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLSQSIN*RFQCEK
Trigger: CTTCTCACATTGGAATCTGCAATTGATACTTTGGCT...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGCTTTTCCTGTTAGCTaGATACTTGTTTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGAFPVS*ILVSHY
Trigger: ATAATGGGAAACAAGTATGCAGCTAACAGGAAAAGC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTCCTTGCTAAACTACTaGTATGGTTTATCCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSSLLNY*YGLSVH
Trigger: ATGGACGGATAAACCATAGCAGTAGTTTAGCAAGGA...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTCTGCACAAACCTTTaGTATTCGACTAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKFCTNL*YSTSCF
Trigger: GAAACAGCTAGTCGAATAGCAAAGGTTTGTGCAGAA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTGTAGTAATGATTGCTaGATACTGGACAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGCSNDC*ILDNPF
Trigger: GAAAGGATTGTCCAGTATGCAGCAATCATTACTACA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATATCTGTAGTAATGATTaGTGCATACTGGACAATCCT +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYICSND*CILDNP
Trigger: AGGATTGTCCAGTATGCAGCAATCATTACTACAGAT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAAATCCAAGCAGCTTTaGAGGTCTTCAGCTAAAATG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKKSKQL*RSSAKM
Trigger: CATTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAAAATCAATGGTTTTTaGAAACGAGTCTTGATGCGT +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFKINGF*KRVLMR
Trigger: ACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTAAAATAATCTTGCAGTaGTCTTTTAGGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVKIILQ*SFRHAL
Trigger: CAGAGCATGCCTAAAAGAGCACTGCAAGATTATTTT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAAATAATCTTGCAGTaGTCTTTTAGGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKKIILQ*SFRHAL
Trigger: CAGAGCATGCCTAAAAGAGCACTGCAAGATTATTTT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACTCTTCTCTGGTGCACTaGAACATTCTGAATAATATT +
Preference number: 4 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDSSLVH*NILNNI
Trigger: AATATTATTCAGAATGTTCCAGTGCACCAGAGAAGA...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTTGCAAAACTGAGTTaGGCTGTCAAAATGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKFAKLS*AVKMLD
Trigger: ATCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGTATTGTTTCATCAGTaGCAGAATCACTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNVLFHQ*QNHCLT
Trigger: TGTTAAACAGTGATTCTGCCACTGATGAAACAATAC...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAAGAAGTAAGTCAGGATaGTCTGGTATTGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIRSKSG*SGIVSS
Trigger: TGATGAAACAATACCAGACCATCCTGACTTACTTCT...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTAGAAGTAAGTCAGGATaGTCTGGTATTGTTTCATCA +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLRSKSG*SGIVSS
Trigger: TGATGAAACAATACCAGACCATCCTGACTTACTTCT...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTATTGTGGGAGATATTaGCAGCTGTTAAAATATCAG +
Preference number: 4 (lower is better)
Translates to: KINGFCKRVLMRIADCMFYCGRY*QLLKYQ
Trigger: CTGATATTTTAACAGCTGCCAATATCTCCCACAATA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTATTGTGGGAGATATTaGCAGCTGTTAAAATATCAG +
Preference number: 4 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAYCGRY*QLLKYQ
Trigger: CTGATATTTTAACAGCTGCCAATATCTCCCACAATA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATATTGTGGGAGATATTaGCAGCTGTTAAAATATCAG +
Preference number: 4 (lower is better)
Translates to: NETALISASFHLLLVVSVYCGRY*QLLKYQ
Trigger: CTGATATTTTAACAGCTGCCAATATCTCCCACAATA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCATCCATATGAATTGTaGGCCTTGCTAACAATTCAA +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYHPYEL*ALLTIQ
Trigger: TTGAATTGTTAGCAAGGCTCACAATTCATATGGATG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR TCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTATTAAATGTTGTATCTaGGAAGGAGTCATGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSIKCCI*EGVMQV
Trigger: TACCTGCATGACTCCTTCTCAGATACAACATTTAAT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR TCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCCTTATCCCACATACTaGAAAATCAATGGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSPYPTY*KINGFC
Trigger: GCAAAAACCATTGATTTTTCAGTATGTGGGATAAGG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAGCTCTTCTAGCAACTaGATTGTTTTATCTCTACCT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSSSSN*IVLSLP
Trigger: AGGTAGAGATAAAACAATGCAGTTGCTAGAAGAGCT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGCTTTTCCTGTTAGCTaGATACTTGTTTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKAFPVS*ILVSHY
Trigger: ATAATGGGAAACAAGTATGCAGCTAACAGGAAAAGC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTGCTTTTCCTGTTAGCTaGATACTTGTTTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSAFPVS*ILVSHY
Trigger: ATAATGGGAAACAAGTATGCAGCTAACAGGAAAAGC...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTGTAGTAATGATTGCTaGATACTGGACAATCCTTTC +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSCSNDC*ILDNPF
Trigger: GAAAGGATTGTCCAGTATGCAGCAATCATTACTACA...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTATCTGTAGTAATGATTaGTGCATACTGGACAATCCT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSICSND*CILDNP
Trigger: AGGATTGTCCAGTATGCAGCAATCATTACTACAGAT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTACACTAAAAAGTAGATaGTGCCAGAAAGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: LVTLKSRCCQKVISECKGTLKSR*CQKVIS
Trigger: ACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTAAAATCAATGGTTTTTaGAAACGAGTCTTGATGCGT +
Preference number: 4 (lower is better)
Translates to: SVNARVHKRCLVNILHHLKINGF*KRVLMR
Trigger: ACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAAAATAATCTTGCAGTaGTCTTTTAGGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKKIILQ*SFRHAL
Trigger: CAGAGCATGCCTAAAAGAGCACTGCAAGATTATTTT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTCTTTTCTTGAATTCTaGAGACTTCAAAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSSFLEF*RLQSLQ
Trigger: TTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGAGCTCCAATTCTTGTaGATCTGTGTTTATCCTATA +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKELQFL*ICVYPI
Trigger: TATAGGATAAACACAGATGCACAAGAATTGGAGCTC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507873.7
CDS-3UTR CCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTACTAAGGCACTAAAATaGCATCGTATATCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSTKALK*HRISFS
Trigger: ACTGAAGGATATACGATGCCATTTTAGTGCCTTAGT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTCTTCTCTGGTGCACTaGAACATTCTGAATAATATT +
Preference number: 4 (lower is better)
Translates to: FFTQLLWEILAAVKISDVSSLVH*NILNNI
Trigger: AATATTATTCAGAATGTTCCAGTGCACCAGAGAAGA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CCA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGTATTGTTTCATCAGTaGCAGAATCACTGTTTAACA +
Preference number: 4 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYVLFHQ*QNHCLT
Trigger: TGTTAAACAGTGATTCTGCCACTGATGAAACAATAC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATGGTTGTTTCAGTATTaGAGGCCATTATTGCAAACA +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKWLFQY*RPLLQT
Trigger: TGTTTGCAATAATGGCCTCCAATACTGAAACAACCA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGCATGTTCATGTGGATaGATGATTAAGCATCAATTG +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYACSCG*MIKHQL
Trigger: CAATTGATGCTTAATCATCCATCCACATGAACATGC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATATGCAGGCATCTACTTTaGTTAGTTATCAACAATCAT +
Preference number: 4 (lower is better)
Translates to: ILNSGITEPSLKEKSQWICRHLL*LVINNH
Trigger: ATGATTGTTGATAACTAACCAAAGTAGATGCCTGCA...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
3UTR CAA 72 bp TATTCCATCATCAATGACCACAATTTTTCTTTAGCTTaGTACACCTATTCTTGTATAACAACAGTGCATGGC +
Preference number: 4 (lower is better)
Translates to: YSIINDHNFSLA*YTYSCITTVHG
Trigger: GCCATGCACTGTTGTTATACAAGAATAGGTGTACAAAGCTAAAGAAAAATTGTGGTCATTGATGATGGAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTCATCGCCATACTTTaGTGTCATATACATCAGATT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKFIAIL*CHIHQI
Trigger: AATCTGATGTATATGACAGCAAAGTATGGCGATGAA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR GCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATACACTAAAAAGTAGATaGTGCCAGAAAGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYTLKSR*CQKVIS
Trigger: ACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGT...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR GCA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTAAAATCAATGGTTTTTaGAAACGAGTCTTGATGCGT +
Preference number: 4 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSKINGF*KRVLMR
Trigger: ACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CCA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTGCAGGCATCTACTTTaGTTAGTTATCAACAATCAT +
Preference number: 4 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYCRHLL*LVINNH
Trigger: ATGATTGTTGATAACTAACCAAAGTAGATGCCTGCA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CCA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATGCAGGCATCTACTTTaGTTAGTTATCAACAATCAT +
Preference number: 4 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKCRHLL*LVINNH
Trigger: ATGATTGTTGATAACTAACCAAAGTAGATGCCTGCA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCCTTCATCATGTCGCCTaGCTGTGGGGAGAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: GTPGGMECPLCQYCPVSALHHVA*LWGEVL
Trigger: TAAAACCTCTCCCCACAGCAAGGCGACATGATGAAG...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp TGGTTTATCCGTCCATCCATTATATCCAGTGTGTTACTCCGCCGCCGGTCACCTCGTAAGGCAAGAGGCTaGGTTCGCTATTCACCCCAC +
Preference number: 5 (lower is better)
Translates to: WFIRPSIISSVLLRRRSPRKARG*VRYSPH
Trigger: GTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTACG...AGGTGACCGGCGGCGGAGTAACACACTGGATATAATGGATGGACGGATAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGAACCATTGCAGTGGCTaGTGGAGATCCCCATCCTTC +
Preference number: 5 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMNHCSG*WRSPSF
Trigger: GAAGGATGGGGATCTCCACAAGCCACTGCAATGGTT...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCGGAGCTACCATTGTATaGCTACTGGAAGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAGATIV*LLEVVP
Trigger: AGGAACTACTTCCAGTAGCAATACAATGGTAGCTCC...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGGGGCAGTGGCTCTCCTaGGTTATGCTCCATCACTTT +
Preference number: 5 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMGQWLS*VMLHHF
Trigger: AAAGTGATGGAGCATAACCAAGGAGAGCCACTGCCC...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS CCA 90 bp ACGCCAGCGTCTCAGGAGGAGAACATCTCACAGAACCTGCAGATGTaGAAGATGACGATGTTGCTGCACTGCAGCAAAGGATCAGATAGT +
Preference number: 5 (lower is better)
Translates to: TPASQEENISQNLQM*KMTMLLHCSKGSDS
Trigger: ACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCACATCTGCAGGTTCTGTGAGATGTTCTCCTCCTGAGACGCTGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS-3UTR CAA 90 bp AAGTGCAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAGTGCCTGCAGAGTATaGAAAGCCAGAGCACGCAGT +
Preference number: 5 (lower is better)
Translates to: KCRSRRLQCSYTSGWQWSSACRV*KARARS
Trigger: ACTGCGTGCTCTGGCTTTCAATACTCTGCAGGCACT...TGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CACACATTCTCCACCTCCGACCAGGCCAGTTCATCGCCATACTTTGCTGTCATATATAATCCATGGGTCTaGGCCTTGGGTCACATGTGC +
Preference number: 5 (lower is better)
Translates to: HTFSTSDQASSSPYFAVIYNPWV*ALGHMC
Trigger: GCACATGTGACCCAAGGCCAAGACCCATGGATTATA...TATGACAGCAAAGTATGGCGATGAACTGGCCTGGTCGGAGGTGGAGAATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAAACCCGCGGACTCAGCTTCTTaGAGGATACTTTCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: QKQAFTMFIHLRVAVVKPADSAS*RILSSW
Trigger: CCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCGC...GGGTTTGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp TATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTCCTGGCTCCGTTCTCTaGACAATGGCGCGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: YTSDCSKPLQWLVEIPILPGSVL*TMARPL
Trigger: AAGGGGACGCGCCATTGTCAAGAGAACGGAGCCAGG...AAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CAGGTTAGAGCCTATAACTGCAAAGCTTCCTGTCTGGCCCAGCGTCTGATGATGTGCACATTCCCAGTGTaGGTTCCTGAATATCCTTCC +
Preference number: 5 (lower is better)
Translates to: QVRAYNCKASCLAQRLMMCTFPV*VPEYPS
Trigger: GGAAGGATATTCAGGAACCAACACTGGGAATGTGCA...CATCATCAGACGCTGGGCCAGACAGGAAGCTTTGCAGTTATAGGCTCTAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS TCA 90 bp CGTCTCAGGAGGAGAACATCTCACAGAACCTGCAGATGTGGAAGATaGCGATGTTGCTGCACTGCAGCAAAGGATCAGATAGTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: RLRRRTSHRTCRCGR*RCCCTAAKDQIVSP
Trigger: TGGAGAAACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCACATCTGCAGGTTCTGTGAGATGTTCTCCTCCTGAGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS-3UTR CAA 90 bp GGTACTCCTGGAGGGATGGAGTGTCCCCTTTGTCAATACTGTCCAGTGAGCGCCGTCATATACATCAGATaGTTCAAAACCATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: GTPGGMECPLCQYCPVSAVIYIR*FKTIAV
Trigger: CACTGCAATGGTTTTGAACAATCTGATGTATATGAC...GGCGCTCACTGGACAGTATTGACAAAGGGGACACTCCATCCCTCCAGGAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GGACTCATCTGTATCCTCCTGATTGGTGAGGTTCAGGCTGGGGGTGCTACTAGATATCTGCACACGACATaGATCCAGTTAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: GLICILLIGEVQAGGATRYLHTT*IQLEQS
Trigger: AGACTGTTCTAACTGGATCAATGTCGTGTGCAGATA...TCTAGTAGCACCCCCAGCCTGAACCTCACCAATCAGGAGGATACAGATGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CACACATTCTCCACCTCCGACCAGGCCAGTTCATCGCCATACTTTGCTGTCATATTGCTCTTCTTCATCTaGACTAGACAGTCCGGAGAA +
Preference number: 5 (lower is better)
Translates to: HTFSTSDQASSSPYFAVILLFFI*TRQSGE
Trigger: TTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCAA...TATGACAGCAAAGTATGGCGATGAACTGGCCTGGTCGGAGGTGGAGAATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS CCA 90 bp AATGGCGCGTCCCCTTTAAGGAATAATCCGATCGGAACCGATCTGTaGTTAAACCTCCCTCCGACTCTGATTTTAACCGGATTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: NGASPLRNNPIGTDL*LNLPPTLILTGFLS
Trigger: AGAGAGAAATCCGGTTAAAATCAGAGTCGGAGGGAGGTTTAACCACAGATCGGTTCCGATCGGATTATTCCTTAAAGGGGACGCGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000358350.9
ENST00000502520.5
ENST00000503238.6
ENST00000505437.5
ENST00000509886.5
ENST00000514783.5
CDS-3UTR CAA 90 bp AAGTGCAGAAGCAGGCGTTTACAATGTTCATACACCTCAGGGTGGCAGTGGTCAATCTTCCGTTCCATTTaGGCGTCTGTACCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: KCRSRRLQCSYTSGWQWSIFRSI*ASVPVK
Trigger: TTTGACTGGTACAGACGCCAAAATGGAACGGAAGAT...TGACCACTGCCACCCTGAGGTGTATGAACATTGTAAACGCCTGCTTCTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCCTTCATCATGTCGCCTaGCTGTGGGGAGAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEALHHVA*LWGEVL
Trigger: TAAAACCTCTCCCCACAGCAAGGCGACATGATGAAG...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCGTAAGGCAAGAGGCTaGGTTCGCTATTCACCCCAC +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCRKARG*VRYSPH
Trigger: GTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTACG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TGTCGCCTTGCTGTGGGGAGAGGTTTTAAGTCCACCAGCTCGATGTTGTTCATCTTTGGTACCAATGCGTaGCAGACTATCACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: CRLAVGRGFKSTSSMLFIFGTNA*QTITKK
Trigger: TTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAA...GATGAACAACATCGAGCTGGTGGACTTAAAACCTCTCCCCACAGCAAGGCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS TCA 90 bp AGACTCTATGGGACACATGAGGCAATCTGTCAGTGCAAGGTGATGTaGATCAGTGCTCCTGCTGATCCTCATGAACACCAAATTACAGCA +
Preference number: 5 (lower is better)
Translates to: RLYGTHEAICQCKVM*ISAPADPHEHQITA
Trigger: TGCTGTAATTTGGTGTTCATGAGGATCAGCAGGAGCACTGATTCACATCACCTTGCACTGACAGATTGCCTCATGTGTCCCATAGAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS GCA 90 bp GGGCTGTGGCCATATCCAGTCCTTAGCTCTTCCTATCCTAGTGACTaGTGCCTTAAGGTCTTAGTATCTCAGTTAAACCAAGAGATCACA +
Preference number: 5 (lower is better)
Translates to: GLWPYPVLSSSYPSD*CLKVLVSQLNQEIT
Trigger: TGTGATCTCTTGGTTTAACTGAGATACTAAGACCTTAAGGCAGCAGTCACTAGGATAGGAAGAGCTAAGGACTGGATATGGCCACAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302806.5
CDS GCA 90 bp ATCTCACAGAACCTGCAGATGTGGAAGATGACGATGTTGCTGCACTaGAGCAAAGGATCAGATAGTTTCTCCACAGGCCAATGTATGAGT +
Preference number: 5 (lower is better)
Translates to: ISQNLQMWKMTMLLH*SKGSDSFSTGQCMS
Trigger: ACTCATACATTGGCCTGTGGAGAAACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCACATCTGCAGGTTCTGTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS-3UTR CAA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTTGGAAGATGACGATGTaGCTGCACTGCAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCWKMTM*LHCSKG
Trigger: TCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCA...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CGTAACCAGCGCCTACTAGTCACCATAAGTTCTCGGTCTTTTAAGGAATCATCTAAGTGTGCAACTTGTTaGACTGTAAGCACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RNQRLLVTISSRSFKESSKCATC*TVSTLG
Trigger: GCCCAGGGTGCTTACAGTCAAACAAGTTGCACACTT...AGATGATTCCTTAAAAGACCGAGAACTTATGGTGACTAGTAGGCGCTGGTTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGAGATGTCAACCTCATaGAGGATAGTGGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEAEMSTS*RIVVCR
Trigger: TCTGCACACCACTATCCTCAATGAGGTTGACATCTC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAATGGTGGCCATCAAGTaGGTAGGCTCAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQMVAIK*VGSVVD
Trigger: GTCCACTACTGAGCCTACCAACTTGATGGCCACCAT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGAGAAGTAAGTCAGGATGGTCTGGTATTGTTTCATCAGTGGCAGAATCACTGTGATGGAGTGTCCCCTTaGTCAATACTGTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: GEVSQDGLVLFHQWQNHCDGVSP*SILSSE
Trigger: CTCACTGGACAGTATTGACAAAGGGGACACTCCATC...ACAGTGATTCTGCCACTGATGAAACAATACCAGACCATCCTGACTTACTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGGTCTCATCCCTGATTaGAAGCACTTCCTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEAGLIPD*KHFLCC
Trigger: ACAACAGAGGAAGTGCTTCAAATCAGGGATGAGACC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS TCA 90 bp TCCTTAGACTCTATGGGACACATGAGGCAATCTGTCAGTGCAAGGTaGTGTGAATCAGTGCTCCTGCTGATCCTCATGAACACCAAATTA +
Preference number: 5 (lower is better)
Translates to: SLDSMGHMRQSVSAR*CESVLLLILMNTKL
Trigger: TAATTTGGTGTTCATGAGGATCAGCAGGAGCACTGATTCACATCACCTTGCACTGACAGATTGCCTCATGTGTCCCATAGAGTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS GCA 90 bp GGAAGAATAACTCCTGTTGTTGGCATGGGTGGTTCACCATCTTTCTaGTGCAAACTGTCTGCTATTACAAGGAAGACTCTGAGACCTATG +
Preference number: 5 (lower is better)
Translates to: GRITPVVGMGGSPSF*CKLSAITRKTLRPM
Trigger: CATAGGTCTCAGAGTCTTCCTTGTAATAGCAGACAGTTTGCAGCAGAAAGATGGTGAACCACCCATGCCAACAACAGGAGTTATTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCCTGGCTCCGTTCTCTaGACAATGGCGCGTCCCCTT +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYPGSVL*TMARPL
Trigger: AAGGGGACGCGCCATTGTCAAGAGAACGGAGCCAGG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGCTCAGGATACGCCCTaGCTAGTTCCTCGGACAACT +
Preference number: 5 (lower is better)
Translates to: KINGFCKRVLMRIADCMFAQDTP*LVPRTT
Trigger: AGTTGTCCGAGGAACTAGCAAGGGCGTATCCTGAGC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CAA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATCGTAAGGCAAGAGGCTaGGTTCGCTATTCACCCCAC +
Preference number: 5 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNRKARG*VRYSPH
Trigger: GTGGGGTGAATAGCGAACCAAGCCTCTTGCCTTACG...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGGCTTATTATCAGGATaGCCATCTGTGGGAGCTACC +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQGLLSG*PSVGAT
Trigger: GGTAGCTCCCACAGATGGCAATCCTGATAATAAGCC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAAGGACTTGTGCTTAGATaGAGTTGTCCAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKGLVLR*SCPVLF
Trigger: GAAAAGCACTGGACAACTCAATCTAAGCACAAGTCC...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAATGGTGGCCATCAAGTaGGTAGGCTCAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKMVAIK*VGSVVD
Trigger: GTCCACTACTGAGCCTACCAACTTGATGGCCACCAT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAATGGATAAGCAGTTTGTaGAGAAGCCTGAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQWISSL*RSLRAR
Trigger: CCTGGCTCTCAGGCTTCTCAACAAACTGCTTATCCA...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAGATGGAGTGTCCCCTTaGTCAATACTGTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQDGVSP*SILSSE
Trigger: CTCACTGGACAGTATTGACAAAGGGGACACTCCATC...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCCCTTTAATACTGAAGTaGTATCCTCAGGCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCPLILK*YPQAAG
Trigger: GCCGGCTGCCTGAGGATACAACTTCAGTATTAAAGG...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCGCGGACTCAGCTTCTTaGAGGATACTTTCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCADSAS*RILSSW
Trigger: CCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCGC...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATATTTCCCATTGGTTaGGCCTGTGCTAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEAIFPIG*ACARSW
Trigger: CCAACTTCTAGCACAGGCCAAACCAATGGGAAATAT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAATCACCATATTTCCCATaGGTTTGGCCTGTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKSPYFP*VWPVLE
Trigger: TTCTAGCACAGGCCAAACCAATGGGAAATATGGTGA...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GTTCCTGAGAAGGACAGAAGCAACAGTTCGGATGTTACTATTGGGTCCCATTACTTCACCTGCTTTTGGTaGTTTCAGTATTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: VPEKDRSNSSDVTIGSHYFTCFW*FQYWRP
Trigger: TGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAA...GTAATGGGACCCAATAGTAACATCCGAACTGTTGCTTCTGTCCTTCTCAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS GCA 90 bp GCTATTTATATCGACCTGAGGGGACAACAACTGAAGTCTTGTGTATaGAAACATCCAAGCATAGCTCACAGCTGTAGAGCAGTGTTTAGG +
Preference number: 5 (lower is better)
Translates to: AIYIDLRGQQLKSCV*KHPSIAHSCRAVFR
Trigger: CCTAAACACTGCTCTACAGCTGTGAGCTATGCTTGGATGTTTGCATACACAAGACTTCAGTTGTTGTCCCCTCAGGTCGATATAAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS CCA 90 bp GCTCCAATTCTTGTGCATCTGTGTTTATCCTATACATGTCTTCTTTaGCACCAAATGTCCTCTTACAATCATCTAGCCACTGCTCAGCGG +
Preference number: 5 (lower is better)
Translates to: APILVHLCLSYTCLL*HQMSSYNHLATAQR
Trigger: CCGCTGAGCAGTGGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAAACACAGATGCACAAGAATTGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507873.7
ENST00000512810.1
CDS-3UTR CAA 90 bp GGCAAGAGGCTTGGTTCGCTATTCACCCCACAAATGCTGATCAAAAAGTGCAAAGCTCATAAGACGACTTaGAGTTACAGTGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: GKRLGSLFTPQMLIKKCKAHKTT*SYSVAF
Trigger: GAAAGCAACACTGTAACTCAAAGTCGTCTTATGAGC...TTTGCACTTTTTGATCAGCATTTGTGGGGTGAATAGCGAACCAAGCCTCTTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATAACCATTGCAGTGGCTaGTGGAGATCCCCATCCTTC +
Preference number: 5 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNNHCSG*WRSPSF
Trigger: GAAGGATGGGGATCTCCACAAGCCACTGCAATGGTT...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGGCTTATTATCAGGATaGCCATCTGTGGGAGCTACC +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKGLLSG*PSVGAT
Trigger: GGTAGCTCCCACAGATGGCAATCCTGATAATAAGCC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATCATGTGTGCCAGATaGACAAGTGTTGGGCATTTT +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEAIMCAR*TSVGHF
Trigger: AAAATGCCCAACACTTGTCAATCTGGCACACATGAT...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACCTTTAATACTGAAGTaGTATCCTCAGGCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKPLILK*YPQAAG
Trigger: GCCGGCTGCCTGAGGATACAACTTCAGTATTAAAGG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS GCA 90 bp TTTCTTTCCCCCGTAATCATGTCTTCAGGCTCCTTATTAGACATCTaGACACTGGTCATACACATTGGTCTCCCAACTTCTTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: FLSPVIMSSGSLLDI*TLVIHIGLPTSLSK
Trigger: TTTGGACAAAGAAGTTGGGAGACCAATGTGTATGACCAGTGTGCAGATGTCTAATAAGGAGCCTGAAGACATGATTACGGGGGAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS GCA 90 bp TTGGATGTACTATGCAGTCCTCTGCCGCCATCTGCTGAAGAAACTTaGAAGTGGCAGTTTCCTAATATTCTGGCATATTTTGTCAACATC +
Preference number: 5 (lower is better)
Translates to: LDVLCSPLPPSAEET*KWQFPNILAYFVNI
Trigger: GATGTTGACAAAATATGCCAGAATATTAGGAAACTGCCACTTGCAAGTTTCTTCAGCAGATGGCGGCAGAGGACTGCATAGTACATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS GCA 90 bp TCACAGCTTGAAAACTTAGCAATTTGGATGTACTATGCAGTCCTCTaGCGCCATCTGCTGAAGAAACTTGCAAGTGGCAGTTTCCTAATA +
Preference number: 5 (lower is better)
Translates to: SQLENLAIWMYYAVL*RHLLKKLASGSFLI
Trigger: TATTAGGAAACTGCCACTTGCAAGTTTCTTCAGCAGATGGCGGCAGAGGACTGCATAGTACATCCAAATTGCTAAGTTTTCAAGCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAACACTGGTCATACACATaGGTCTCCCAACTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQHWSYT*VSQLLC
Trigger: ACAAAGAAGTTGGGAGACCAATGTGTATGACCAGTG...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAACGTCAGGAATCAACCTaGGAATCGCAGCAATACAAG +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKRQEST*ESQQYK
Trigger: CTTGTATTGCTGCGATTCCAAGGTTGATTCCTGACG...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGTGCCTGCAGAGTATaGAAAGCCAGAGCACGCAGT +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKSACRV*KARARS
Trigger: ACTGCGTGCTCTGGCTTTCAATACTCTGCAGGCACT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TCTTCTTCTTCACATCTTTCATCTAGCTCTTTCAGAGCTAAGGTAACATCCTCTCCATGGGTCTTGGCCTaGGGTCACATGTGCAAATAT +
Preference number: 5 (lower is better)
Translates to: SSSSHLSSSSFRAKVTSSPWVLA*GHMCKY
Trigger: ATATTTGCACATGTGACCCAAGGCCAAGACCCATGG...AGAGGATGTTACCTTAGCTCTGAAAGAGCTAGATGAAAGATGTGAAGAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCTAAAAGCTCCTGGGTaGGTCCTGCCAAGACCTAGA +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLKAPG*VLPRPR
Trigger: TCTAGGTCTTGGCAGGACCAACCCAGGAGCTTTTAG...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACTAAAAGCTCCTGGGTaGGTCCTGCCAAGACCTAGA +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKLKAPG*VLPRPR
Trigger: TCTAGGTCTTGGCAGGACCAACCCAGGAGCTTTTAG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACTTCATCATGTCGCCTaGCTGTGGGGAGAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVLHHVA*LWGEVL
Trigger: TAAAACCTCTCCCCACAGCAAGGCGACATGATGAAG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTAACCATTGCAGTGGCTaGTGGAGATCCCCATCCTTC +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGNHCSG*WRSPSF
Trigger: GAAGGATGGGGATCTCCACAAGCCACTGCAATGGTT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATGGCTTATTATCAGGATaGCCATCTGTGGGAGCTACC +
Preference number: 5 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNGLLSG*PSVGAT
Trigger: GGTAGCTCCCACAGATGGCAATCCTGATAATAAGCC...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGGGCAGTGGCTCTCCTaGGTTATGCTCCATCACTTT +
Preference number: 5 (lower is better)
Translates to: SVNARVHKRCLVNILHHLGQWLS*VMLHHF
Trigger: AAAGTGATGGAGCATAACCAAGGAGAGCCACTGCCC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCGGCTCATTAAACTCCTaGTTCCTGAGAAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCGSLNS*FLRRTE
Trigger: TTCTGTCCTTCTCAGGAACAAGGAGTTTAATGAGCC...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAAAGTGTGCAACTTGTTaGACTGTAAGCACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVKCATC*TVSTLG
Trigger: GCCCAGGGTGCTTACAGTCAAACAAGTTGCACACTT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGAGATGTCAACCTCATaGAGGATAGTGGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKEMSTS*RIVVCR
Trigger: TCTGCACACCACTATCCTCAATGAGGTTGACATCTC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATTGGATAAGCAGTTTGTaGAGAAGCCTGAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNWISSL*RSLRAR
Trigger: CCTGGCTCTCAGGCTTCTCAACAAACTGCTTATCCA...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCTGGATAAGCAGTTTGTaGAGAAGCCTGAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAWISSL*RSLRAR
Trigger: CCTGGCTCTCAGGCTTCTCAACAAACTGCTTATCCA...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTGGATAAGCAGTTTGTaGAGAAGCCTGAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: KINGFCKRVLMRIADCMFWISSL*RSLRAR
Trigger: CCTGGCTCTCAGGCTTCTCAACAAACTGCTTATCCA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACCCTTTAATACTGAAGTaGTATCCTCAGGCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDPLILK*YPQAAG
Trigger: GCCGGCTGCCTGAGGATACAACTTCAGTATTAAAGG...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGCTCTTCTTCATCTaGACTAGACAGTCCGGAGAA +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCLLFFI*TRQSGE
Trigger: TTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCAA...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACACATCCACAAAGACTGTaGGGCATTCTGAACACAGCA +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTHPQRL*GILNTA
Trigger: TGCTGTGTTCAGAATGCCCAACAGTCTTTGTGGATG...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCGCTTCTCTTTTCACATaGTATGTATCCAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEAASLFT*YVSRCS
Trigger: AGAACACCTGGATACATACAATGTGAAAAGAGAAGC...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGATATTTCCCATTGGTTaGGCCTGTGCTAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEIFPIG*ACARSW
Trigger: CCAACTTCTAGCACAGGCCAAACCAATGGGAAATAT...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp TATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTTTTTGCAAACGAGTCTaGATGCGTATAGCTGACTGC +
Preference number: 5 (lower is better)
Translates to: YTSDCSKPLQWLVEIPILFCKRV*MRIADC
Trigger: GCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAA...AAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS GCA 90 bp ACAGTCTCTGGAATACGTGTGTGTACTGTACAAACTCATCATGTGTaGCAGATTGACAAGTGTTGGGCATTTTTCTTCTGCACAAACCTT +
Preference number: 5 (lower is better)
Translates to: TVSGIRVCTVQTHHV*QIDKCWAFFFCTNL
Trigger: AAGGTTTGTGCAGAAGAAAAATGCCCAACACTTGTCAATCTGGCACACATGATGAGTTTGTACAGTACACACACGTATTCCAGAGACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000513401.5
ENST00000514617.5
ENST00000641795.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAATCTTCCGTTCCATTTaGGCGTCTGTACCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTIFRSI*ASVPVK
Trigger: TTTGACTGGTACAGACGCCAAAATGGAACGGAAGAT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAATAATCTCTTTCACGTaGCTGTTCATCCCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQIISFT*LFIPLR
Trigger: TCTAAGGGGGATGAACAGCAACGTGAAAGAGATTAT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGTTTTTGATCTGGAGCTaGTACTTTACAGGCACTCGA +
Preference number: 5 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEFLIWS*YFTGTR
Trigger: TCGAGTGCCTGTAAAGTACAAGCTCCAGATCAAAAA...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATTACAGCCTGAAACTTaGATTGGGCAAGAACCCCTA +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKLQPET*IGQEPL
Trigger: TAGGGGTTCTTGCCCAATCAAAGTTTCAGGCTGTAA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCGTCAGGAATCAACCTaGGAATCGCAGCAATACAAG +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTARQEST*ESQQYK
Trigger: CTTGTATTGCTGCGATTCCAAGGTTGATTCCTGACG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACCATGGGTCTTGGCCTaGGGTCACATGTGCAAATAT +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKPWVLA*GHMCKY
Trigger: ATATTTGCACATGTGACCCAAGGCCAAGACCCATGG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATATAATCCATGGGTCTaGGCCTTGGGTCACATGTGC +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKYNPWV*ALGHMC
Trigger: GCACATGTGACCCAAGGCCAAGACCCATGGATTATA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTGGAAGATGACGATGTaGCTGCACTGCAGCAAAGGA +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGWKMTM*LHCSKG
Trigger: TCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGGAGCTACCATTGTATaGCTACTGGAAGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKGATIV*LLEVVP
Trigger: AGGAACTACTTCCAGTAGCAATACAATGGTAGCTCC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCGGCTTATTATCAGGATaGCCATCTGTGGGAGCTACC +
Preference number: 5 (lower is better)
Translates to: QEFLDTQEIPAVLELYRIGLLSG*PSVGAT
Trigger: GGTAGCTCCCACAGATGGCAATCCTGATAATAAGCC...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGGGCTCATTAAACTCCTaGTTCCTGAGAAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLGSLNS*FLRRTE
Trigger: TTCTGTCCTTCTCAGGAACAAGGAGTTTAATGAGCC...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAGTGTGCAACTTGTTaGACTGTAAGCACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKKCATC*TVSTLG
Trigger: GCCCAGGGTGCTTACAGTCAAACAAGTTGCACACTT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTAAGTGTGCAACTTGTTaGACTGTAAGCACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVKCATC*TVSTLG
Trigger: GCCCAGGGTGCTTACAGTCAAACAAGTTGCACACTT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACGAGATGTCAACCTCATaGAGGATAGTGGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDEMSTS*RIVVCR
Trigger: TCTGCACACCACTATCCTCAATGAGGTTGACATCTC...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp GCATTTTTCTTCTGCACAAACCTGACAATTGGGAAGGATCCACCAATGTATGTTAATTCCATGAGGGTTTaGACTTTTCCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AFFFCTNLTIGKDPPMYVNSMRV*TFPSCS
Trigger: GGAGCAGGATGGAAAAGTCAAAACCCTCATGGAATT...AACATACATTGGTGGATCCTTCCCAATTGTCAGGTTTGTGCAGAAGAAAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTATGGTGGCCATCAAGTaGGTAGGCTCAGTAGTGGAC +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSMVAIK*VGSVVD
Trigger: GTCCACTACTGAGCCTACCAACTTGATGGCCACCAT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CGTATTTACTTGGTTGATAAGTTTACAGTAGGCCTGGAACAGAAGCAGCAATTGAAATGGATAAGCAGTTaGTTGAGAAGCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: RIYLVDKFTVGLEQKQQLKWISS*LRSLRA
Trigger: GGCTCTCAGGCTTCTCAACAAACTGCTTATCCATTT...CAATTGCTGCTTCTGTTCCAGGCCTACTGTAAACTTATCAACCAAGTAAATACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCATCATGTGTGCCAGATaGACAAGTGTTGGGCATTTT +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCIMCAR*TSVGHF
Trigger: AAAATGCCCAACACTTGTCAATCTGGCACACATGAT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTGATGGAGTGTCCCCTTaGTCAATACTGTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGDGVSP*SILSSE
Trigger: CTCACTGGACAGTATTGACAAAGGGGACACTCCATC...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGATGGAGTGTCCCCTTaGTCAATACTGTCCAGTGAG +
Preference number: 5 (lower is better)
Translates to: SVNARVHKRCLVNILHHLDGVSP*SILSSE
Trigger: CTCACTGGACAGTATTGACAAAGGGGACACTCCATC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GTGACCAGTTACGAAATTTTACTGGAAATGTTTAACTGTGGTCAGCAGTCCAATCATCCACAAAGACTGTaGGGCATTCTGAACACAGCA +
Preference number: 5 (lower is better)
Translates to: VTSYEILLEMFNCGQQSNHPQRL*GILNTA
Trigger: TGCTGTGTTCAGAATGCCCAACAGTCTTTGTGGATG...ATTGGACTGCTGACCACAGTTAAACATTTCCAGTAAAATTTCGTAACTGGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCAGTTCCTCTGACATGTaGATGACCTCTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCSSSDM*MTSASF
Trigger: AAATGAAGCAGAGGTCATCAACATGTCAGAGGAACT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTGCGGACTCAGCTTCTTaGAGGATACTTTCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: SVNARVHKRCLVNILHHLADSAS*RILSSW
Trigger: CCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCGC...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGCGGACTCAGCTTCTTaGAGGATACTTTCCAGTTGG +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYADSAS*RILSSW
Trigger: CCAACTGGAAAGTATCCTCAAAGAAGCTGAGTCCGC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAATATTTCCCATTGGTTaGGCCTGTGCTAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTIFPIG*ACARSW
Trigger: CCAACTTCTAGCACAGGCCAAACCAATGGGAAATAT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATCACCATATTTCCCATaGGTTTGGCCTGTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTSPYFP*VWPVLE
Trigger: TTCTAGCACAGGCCAAACCAATGGGAAATATGGTGA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACATTCTTCACGCAGTTATaGTGGGAGATATTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTFFTQL*WEILAA
Trigger: AGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCTATTGGAGGCCATTATaGCAAACATTCTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEAYWRPL*QTFLEF
Trigger: GAATTCCAAGAATGTTTGCAATAATGGCCTCCAATA...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCTTTGTACACCTATTCTaGTATAACAACAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: ALISASFHLLLVVSVLEAFVHLF*YNNSAW
Trigger: CCATGCACTGTTGTTATACAAGAATAGGTGTACAAA...GGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAGCAGAGCTCCAATTCTaGTGCATCTGTGTTTATCCT +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKAELQF*CICVYP
Trigger: AGGATAAACACAGATGCACAAGAATTGGAGCTCTGC...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507873.7
CDS TCA 90 bp CATGCTCTCAGAACGCATCATTGGAACTATGTGCTTAAACAAGGATaGAGGGGATGGGATGCCAATAATTTTAGAATCAATGCTATAGCC +
Preference number: 5 (lower is better)
Translates to: HALRTHHWNYVLKQG*RGWDANNFRINAIA
Trigger: GGCTATAGCATTGATTCTAAAATTATTGGCATCCCATCCCCTTCATCCTTGTTTAAGCACATAGTTCCAATGATGCGTTCTGAGAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
CDS TCA 90 bp CAAATTACAGCAAGTAAGTTTTGGGGCAAACATTGTTTCACAGCTTaGAAACTTAGCAATTTGGATGTACTATGCAGTCCTCTGCCGCCA +
Preference number: 5 (lower is better)
Translates to: QITASKFWGKHCFTA*KLSNLDVLCSPLPP
Trigger: TGGCGGCAGAGGACTGCATAGTACATCCAAATTGCTAAGTTTTCAAGCTGTGAAACAATGTTTGCCCCAAAACTTACTTGCTGTAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS TCA 90 bp GGCAATTCCTCAAGGATCGTATCACTTGAGACAGTAATTTCTTGGTaGCTTGGATCATCTAATCCTATGACTCTTGAGTGGTTTCAGGAA +
Preference number: 5 (lower is better)
Translates to: GNSSRIVSLETVISW*LGSSNPMTLEWFQE
Trigger: TTCCTGAAACCACTCAAGAGTCATAGGATTAGATGATCCAAGTCACCAAGAAATTACTGTCTCAAGTGATACGATCCTTGAGGAATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509886.5
ENST00000514783.5
CDS CCA 90 bp CTAGTTGTTGGTGTTCGTATTTGTCATAATTACTATGACAGAAATTaGTTCCACCTTGCTCATCCACCGTCTTCTCAGATGAAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LVVGVRICHNYYDRN*FHLAHPPSSQMKVS
Trigger: GCTCACTTTCATCTGAGAAGACGGTGGATGAGCAAGGTGGAACCAATTTCTGTCATAGTAATTATGACAAATACGAACACCAACAACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505759.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAACATATTCACCAGGTTaGACATCTGGGTCAATCGTA +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTTYSPG*TSGSIV
Trigger: TACGATTGACCCAGATGTCAAACCTGGTGAATATGT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACAGTATTTATTTACTTaGCTGACTGGCGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVQYLFT*LTGAEA
Trigger: CGCTTCAGCGCCAGTCAGCAAAGTAAATAAATACTG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCATCTTCACAAATATATaGAGAGGTGTGTCACGAGGA +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCIFTNI*RGVSRG
Trigger: TCCTCGTGACACACCTCTCAATATATTTGTGAAGAT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGGTCTCCCAACTTCTTaGTCCAAATGTCTGAGGATG +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKGLPTS*SKCLRM
Trigger: CATCCTCAGACATTTGGACAAAGAAGTTGGGAGACC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACGGTCTCCCAACTTCTTaGTCCAAATGTCTGAGGATG +
Preference number: 5 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNGLPTS*SKCLRM
Trigger: CATCCTCAGACATTTGGACAAAGAAGTTGGGAGACC...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAATTATTTTCAGGTTTTaGGGCCAGCCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKIIFRF*GQPSAS
Trigger: ACTTGCAGATGGCTGGCCCAAAAACCTGAAAATAAT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGGAGCTACCATTGTATaGCTACTGGAAGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVGATIV*LLEVVP
Trigger: AGGAACTACTTCCAGTAGCAATACAATGGTAGCTCC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGGCTCATTAAACTCCTaGTTCCTGAGAAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: KINGFCKRVLMRIADCMFGSLNS*FLRRTE
Trigger: TTCTGTCCTTCTCAGGAACAAGGAGTTTAATGAGCC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGAGATGTCAACCTCATaGAGGATAGTGGTGTGCAGA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYEMSTS*RIVVCR
Trigger: TCTGCACACCACTATCCTCAATGAGGTTGACATCTC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCAATTCCATGAGGGTTTaGACTTTTCCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KINGFCKRVLMRIADCMFNSMRV*TFPSCS
Trigger: GGAGCAGGATGGAAAAGTCAAAACCCTCATGGAATT...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACAATTCCATGAGGGTTTaGACTTTTCCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDNSMRV*TFPSCS
Trigger: GGAGCAGGATGGAAAAGTCAAAACCCTCATGGAATT...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTAATTCCATGAGGGTTTaGACTTTTCCATCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTANSMRV*TFPSCS
Trigger: GGAGCAGGATGGAAAAGTCAAAACCCTCATGGAATT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACACAGGAAAGTGCTGTTaGCAGAGCAACTTCACTAAG +
Preference number: 5 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDTGKCC*QSNFTK
Trigger: CTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTGT...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGGACTTGTGCTTAGATaGAGTTGTCCAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAGLVLR*SCPVLF
Trigger: GAAAAGCACTGGACAACTCAATCTAAGCACAAGTCC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTCTTTGCAAAACTGAGTaGGGCTGTCAAAATGCTGGA +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTALCKTE*GCQNAG
Trigger: TCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAAG...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAATCATGTGTGCCAGATaGACAAGTGTTGGGCATTTT +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTIMCAR*TSVGHF
Trigger: AAAATGCCCAACACTTGTCAATCTGGCACACATGAT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGGTCTCATCCCTGATTaGAAGCACTTCCTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYGLIPD*KHFLCC
Trigger: ACAACAGAGGAAGTGCTTCAAATCAGGGATGAGACC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGGTCTCATCCCTGATTaGAAGCACTTCCTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIGLIPD*KHFLCC
Trigger: ACAACAGAGGAAGTGCTTCAAATCAGGGATGAGACC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCCTTTAATACTGAAGTaGTATCCTCAGGCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYPLILK*YPQAAG
Trigger: GCCGGCTGCCTGAGGATACAACTTCAGTATTAAAGG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACATCCACAAAGACTGTaGGGCATTCTGAACACAGCA +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKHPQRL*GILNTA
Trigger: TGCTGTGTTCAGAATGCCCAACAGTCTTTGTGGATG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAATGTATCCAGGTGTTCTaGCAACTCCAAAACACCAAA +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKCIQVF*QLQNTK
Trigger: TTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACA...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTCTTCACGCAGTTATaGTGGGAGATATTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVFFTQL*WEILAA
Trigger: AGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTATCCTATACATGTCTTCTTTGGCACCAAATGTCCTCTTACAATCATCTAGCCTTCTTCACGCAGTTATaGTGGGAGATATTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LSYTCLLWHQMSSYNHLAFFTQL*WEILAA
Trigger: AGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA...GGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTTCACCTGCTTTTGGTaGTTTCAGTATTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAFTCFW*FQYWRP
Trigger: TGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAGTATATTGCATGTTTaGGTAGTCAGTCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQSILHV*VVSLQA
Trigger: AGCCTGAAGACTGACTACCAAAACATGCAATATACT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS GCA 90 bp GATTCTGTGATTTCCATGCTCTCAGAACGCATCATTGGAACTATGTaGTTAAACAAGGATGAAGGGGATGGGATGCCAATAATTTTAGAA +
Preference number: 5 (lower is better)
Translates to: DSVISMLSERIIGTM*LNKDEGDGMPIILE
Trigger: TTCTAAAATTATTGGCATCCCATCCCCTTCATCCTTGTTTAAGCACATAGTTCCAATGATGCGTTCTGAGAGCATGGAAATCACAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATGCACATTCCCAGTGTaGGTTCCTGAATATCCTTCC +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKCTFPV*VPEYPS
Trigger: GGAAGGATATTCAGGAACCAACACTGGGAATGTGCA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTTACAGCCTGAAACTTaGATTGGGCAAGAACCCCTA +
Preference number: 5 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIILQPET*IGQEPL
Trigger: TAGGGGTTCTTGCCCAATCAAAGTTTCAGGCTGTAA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAACACTTCGTGAGCCTTTaGGAAAAAGTGCTGACACTA +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKHFVSL*EKVLTL
Trigger: TAGTGTCAGCACTTTTTCCAAAAGGCTCACGAAGTG...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATCACTTCGTGAGCCTTTaGGAAAAAGTGCTGACACTA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYHFVSL*EKVLTL
Trigger: TAGTGTCAGCACTTTTTCCAAAAGGCTCACGAAGTG...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TCTGATGATGGAAATATATATGTAACAGTGTCTGTACAGGGTCATCTTCACAACCACTGGTCATACACATaGGTCTCCCAACTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: SDDGNIYVTVSVQGHLHNHWSYT*VSQLLC
Trigger: ACAAAGAAGTTGGGAGACCAATGTGTATGACCAGTG...GTTGTGAAGATGACCCTGTACAGACACTGTTACATATATATTTCCATCATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTACCACATGGAATACATaGGAATATGGGCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVTTWNT*EYGLLS
Trigger: GGAAAGGAGCCCATATTCCAATGTATTCCATGTGGT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAGTGACGAAGGCTCTGTaGAGGAAAAATACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVVTKAL*RKNTSS
Trigger: AGAAGAAGTATTTTTCCTCAACAGAGCCTTCGTCAC...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGATTGTTCAAAACCATaGCAGTGGCTTGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIDCSKP*QWLVEI
Trigger: GATCTCCACAAGCCACTGCAATGGTTTTGAACAATC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TTGGGAAGGATCCACCAATGTATGTTTGGAGACAGAAATGAGTTTACTGAGGAGGTTCGGATGTTACTATaGGGTCCCATTACTATTAAT +
Preference number: 5 (lower is better)
Translates to: LGRIHQCMFGDRNEFTEEVRMLL*GPITIN
Trigger: ATTAATAGTAATGGGACCCAATAGTAACATCCGAAC...CTCCTCAGTAAACTCATTTCTGTCTCCAAACATACATTGGTGGATCCTTCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGGCTCATTAAACTCCTaGTTCCTGAGAAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYGSLNS*FLRRTE
Trigger: TTCTGTCCTTCTCAGGAACAAGGAGTTTAATGAGCC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATACAGGAAAGTGCTGTTaGCAGAGCAACTTCACTAAG +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYTGKCC*QSNFTK
Trigger: CTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTGT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGGACTTGTGCTTAGATaGAGTTGTCCAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIGLVLR*SCPVLF
Trigger: GAAAAGCACTGGACAACTCAATCTAAGCACAAGTCC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAAAATGGATAAGCAGTTaGTTGAGAAGCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIKWISS*LRSLRA
Trigger: GGCTCTCAGGCTTCTCAACAAACTGCTTATCCATTT...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCTTTGCAAAACTGAGTaGGGCTGTCAAAATGCTGGA +
Preference number: 5 (lower is better)
Translates to: SVNARVHKRCLVNILHHLLCKTE*GCQNAG
Trigger: TCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAAG...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGGTCTCATCCCTGATTaGAAGCACTTCCTCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYGLIPD*KHFLCC
Trigger: ACAACAGAGGAAGTGCTTCAAATCAGGGATGAGACC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCCATAAAAGGTGCAGATTCCTGCTGTTCTaGAATTATATAGGATCCTTC +
Preference number: 5 (lower is better)
Translates to: KVDAARKLSVNARVHKRCRFLLF*NYIGSF
Trigger: GAAGGATCCTATATAATTCAAGAACAGCAGGAATCT...GCACCTTTTATGGACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTGCTCTTCTTCATCTaGACTAGACAGTCCGGAGAA +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLLFFI*TRQSGE
Trigger: TTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAAAGGAACTTTTAAATTaGGTACCAATGCGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: QPHFTCFWLFQYWRPLLQKELLN*VPMRCR
Trigger: TCTGCAACGCATTGGTACCAAATTTAAAAGTTCCTT...TTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCTGTATCCAGGTGTTCTaGCAACTCCAAAACACCAAA +
Preference number: 5 (lower is better)
Translates to: KINGFCKRVLMRIADCMFCIQVF*QLQNTK
Trigger: TTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACA...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACAGTTCCTCTGACATGTaGATGACCTCTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDSSSDM*MTSASF
Trigger: AAATGAAGCAGAGGTCATCAACATGTCAGAGGAACT...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGTAGTTTGTGCAGCTTaGGAAATGTCAATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTVVCAA*EMSISS
Trigger: CGAAGAAATTGACATTTCCAAAGCTGCACAAACTAC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TATACATCAGATTGTTCAAAACCATTGCAGTGGCTTGTGGAGATCCCCATCCTTAGTTTCTATAGTAGTTaGTGCAGCTTTGGAAATGTC +
Preference number: 5 (lower is better)
Translates to: YTSDCSKPLQWLVEIPILSFYSS*CSFGNV
Trigger: GACATTTCCAAAGCTGCACAAACTACTATAGAAACT...AAGGATGGGGATCTCCACAAGCCACTGCAATGGTTTTGAACAATCTGATGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTATATTTCCCATTGGTTaGGCCTGTGCTAGAAGTTGG +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGIFPIG*ACARSW
Trigger: CCAACTTCTAGCACAGGCCAAACCAATGGGAAATAT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTCACCATATTTCCCATaGGTTTGGCCTGTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVSPYFP*VWPVLE
Trigger: TTCTAGCACAGGCCAAACCAATGGGAAATATGGTGA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATTCTTCACGCAGTTATaGTGGGAGATATTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKFFTQL*WEILAA
Trigger: AGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTTCACCTGCTTTTGGTaGTTTCAGTATTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYFTCFW*FQYWRP
Trigger: TGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTTTTGCAAACGAGTCTaGATGCGTATAGCTGACTGC +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVFCKRV*MRIADC
Trigger: GCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTTTGCAAACGAGTCTaGATGCGTATAGCTGACTGC +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGFCKRV*MRIADC
Trigger: GCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAAGTATATTGCATGTTTaGGTAGTCAGTCTTCAGGCT +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKSILHV*VVSLQA
Trigger: AGCCTGAAGACTGACTACCAAAACATGCAATATACT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS TCA 90 bp AAAGCTGTGATGAAATCGACTAGAAAAACACCCACACCCCCAAACTaGAACAAGGACAAGGACATGAACAAGCAAGTTACAAACAATAAA +
Preference number: 5 (lower is better)
Translates to: KAVMKSTRKTPTPPN*NKDKDMNKQVTNNK
Trigger: TTTATTGTTTGTAACTTGCTTGTTCATGTCCTTGTCCTTGTTTCAGTTTGGGGGTGTGGGTGTTTTTCTAGTCGATTTCATCACAGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514783.5
CDS CCA 90 bp CGCCATCTGCTGAAGAAACTTGCAAGTGGCAGTTTCCTAATATTCTaGCATATTTTGTCAACATCGCTTGTCAGTCACATTTCTATAATA +
Preference number: 5 (lower is better)
Translates to: RHLLKKLASGSFLIF*HILSTSLVSHISII
Trigger: TATTATAGAAATGTGACTGACAAGCGATGTTGACAAAATATGCCAGAATATTAGGAAACTGCCACTTGCAAGTTTCTTCAGCAGATGGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTTTTTGATCTGGAGCTaGTACTTTACAGGCACTCGA +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVFLIWS*YFTGTR
Trigger: TCGAGTGCCTGTAAAGTACAAGCTCCAGATCAAAAA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCAGTATTTATTTACTTaGCTGACTGGCGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYQYLFT*LTGAEA
Trigger: CGCTTCAGCGCCAGTCAGCAAAGTAAATAAATACTG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGCTCATAAGACGACTTaGAGTTACAGTGTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIAHKTT*SYSVAF
Trigger: GAAAGCAACACTGTAACTCAAAGTCGTCTTATGAGC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358350.9
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTACCACATGGAATACATaGGAATATGGGCTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSTTWNT*EYGLLS
Trigger: GGAAAGGAGCCCATATTCCAATGTATTCCATGTGGT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTACAACAACTGAAGTCTaGTGTATGCAAACATCCAAG +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTATTTEV*CMQTSK
Trigger: CTTGGATGTTTGCATACACAAGACTTCAGTTGTTGT...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGTGACGAAGGCTCTGTaGAGGAAAAATACTTCTTCT +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKVTKAL*RKNTSS
Trigger: AGAAGAAGTATTTTTCCTCAACAGAGCCTTCGTCAC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTGATTGTTCAAAACCATaGCAGTGGCTTGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSDCSKP*QWLVEI
Trigger: GATCTCCACAAGCCACTGCAATGGTTTTGAACAATC...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGATTGTTCAAAACCATaGCAGTGGCTTGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYDCSKP*QWLVEI
Trigger: GATCTCCACAAGCCACTGCAATGGTTTTGAACAATC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAGTCATATACATCAGATaGTTCAAAACCATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTVIYIR*FKTIAV
Trigger: CACTGCAATGGTTTTGAACAATCTGATGTATATGAC...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGTTCATCGCCATACTTaGCTGTCATATACATCAGAT +
Preference number: 5 (lower is better)
Translates to: KINGFCKRVLMRIADCMFVHRHT*LSYTSD
Trigger: ATCTGATGTATATGACAGCAAAGTATGGCGATGAAC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTGTTCATCGCCATACTTaGCTGTCATATACATCAGAT +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTAVHRHT*LSYTSD
Trigger: ATCTGATGTATATGACAGCAAAGTATGGCGATGAAC...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTATTATTTTCAGGTTTTaGGGCCAGCCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGIIFRF*GQPSAS
Trigger: ACTTGCAGATGGCTGGCCCAAAAACCTGAAAATAAT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGGAGCTACCATTGTATaGCTACTGGAAGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKGATIV*LLEVVP
Trigger: AGGAACTACTTCCAGTAGCAATACAATGGTAGCTCC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTACAGGAAAGTGCTGTTaGCAGAGCAACTTCACTAAG +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSTGKCC*QSNFTK
Trigger: CTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTGT...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAACAGGAAAGTGCTGTTaGCAGAGCAACTTCACTAAG +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKTGKCC*QSNFTK
Trigger: CTTAGTGAAGTTGCTCTGCAAACAGCACTTTCCTGT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTACTGTTAGCTGCATACTaGTTTCCCATTATAGGATCA +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVLLAAY*FPIIGS
Trigger: TGATCCTATAATGGGAAACAAGTATGCAGCTAACAG...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATGGACTTGTGCTTAGATaGAGTTGTCCAGTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYGLVLR*SCPVLF
Trigger: GAAAAGCACTGGACAACTCAATCTAAGCACAAGTCC...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAAATGGATAAGCAGTTaGTTGAGAAGCCTGAGAGCC +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYKWISS*LRSLRA
Trigger: GGCTCTCAGGCTTCTCAACAAACTGCTTATCCATTT...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCTTTGCAAAACTGAGTaGGGCTGTCAAAATGCTGGA +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYLCKTE*GCQNAG
Trigger: TCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAAG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCATCATGTGTGCCAGATaGACAAGTGTTGGGCATTTT +
Preference number: 5 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIIMCAR*TSVGHF
Trigger: AAAATGCCCAACACTTGTCAATCTGGCACACATGAT...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATATCTGCACACGACATaGATCCAGTTAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKYLHTT*IQLEQS
Trigger: AGACTGTTCTAACTGGATCAATGTCGTGTGCAGATA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTATCTGCACACGACATaGATCCAGTTAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVYLHTT*IQLEQS
Trigger: AGACTGTTCTAACTGGATCAATGTCGTGTGCAGATA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTATCTGCACACGACATaGATCCAGTTAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYYLHTT*IQLEQS
Trigger: AGACTGTTCTAACTGGATCAATGTCGTGTGCAGATA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTGCTCTTCTTCATCTaGACTAGACAGTCCGGAGAA +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKLLFFI*TRQSGE
Trigger: TTCTCCGGACTGTCTAGTCAAGATGAAGAAGAGCAA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTTTGGTACCAATGCGTaGCAGACTATCACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIIFGTNA*QTITKK
Trigger: TTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAATTTGGTACCAATGCGTaGCAGACTATCACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKFGTNA*QTITKK
Trigger: TTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAA...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTTTGGTACCAATGCGTaGCAGACTATCACCAAGAAA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYFGTNA*QTITKK
Trigger: TTTCTTGGTGATAGTCTGCAACGCATTGGTACCAAA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GTTAGGTTTTCAACTGCTAGAAATCCAAGCAGCTTTGCAGGTCTTCAGCTAAAAAAGGAACTTTTAAATTaGGTACCAATGCGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: VRFSTARNPSSFAGLQLKKELLN*VPMRCR
Trigger: TCTGCAACGCATTGGTACCAAATTTAAAAGTTCCTT...TTTTAGCTGAAGACCTGCAAAGCTGCTTGGATTTCTAGCAGTTGAAAACCTAAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGAGGCCATTATTGCAAACAAAGGAACTTTTAAATTaGGTACCAATGCGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PHFTCFWLFQYWRPLLQTKELLN*VPMRCR
Trigger: TCTGCAACGCATTGGTACCAAATTTAAAAGTTCCTT...TGTTTGCAATAATGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAAATGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTCCAAAACACCAAACTaGAGTGTTTCCAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: SVNARVHKRCLVNILHHLSKTPN*SVSSKP
Trigger: TGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTCCAAAACACCAAACTaGAGTGTTTCCAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYSKTPN*SVSSKP
Trigger: TGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATTGTATCCAGGTGTTCTaGCAACTCCAAAACACCAAA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYCIQVF*QLQNTK
Trigger: TTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACA...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATAGCTGACTGCATGTTCGCTTCTCTTTTCACATaGTATGTATCCAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: KINGFCKRVLMRIADCMFASLFT*YVSRCS
Trigger: AGAACACCTGGATACATACAATGTGAAAAGAGAAGC...GAACATGCAGTCAGCTATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATAGTTCCTCTGACATGTaGATGACCTCTGCTTCATTT +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYSSSDM*MTSASF
Trigger: AAATGAAGCAGAGGTCATCAACATGTCAGAGGAACT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATCACCATATTTCCCATaGGTTTGGCCTGTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSPYFP*VWPVLE
Trigger: TTCTAGCACAGGCCAAACCAATGGGAAATATGGTGA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTATTGGTTGTTTCAGTATaGGAGGCCATTATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVLVVSV*EAIIAN
Trigger: GTTTGCAATAATGGCCTCCAATACTGAAACAACCAA...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTTCACCTGCTTTTGGTaGTTTCAGTATTGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSFTCFW*FQYWRP
Trigger: TGGCCTCCAATACTGAAACAACCAAAAGCAGGTGAA...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TGTTCATGTGGATGGATGATTAAGCATCAATTGCAGGTTAGGTTTTCAACTGCTTCATTTCACCTGCTTTaGGTTGTTTCAGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: CSCGWMIKHQLQVRFSTASFHLL*VVSVLE
Trigger: CTCCAATACTGAAACAACCAAAAGCAGGTGAAATGA...AGCAGTTGAAAACCTAACCTGCAATTGATGCTTAATCATCCATCCACATGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCAATGACCTGCAGGCATCTACTTaGGTTAGTTATCAACAATCA +
Preference number: 5 (lower is better)
Translates to: LEFCRLQSLQVIYSIINDLQAST*VSYQQS
Trigger: TGATTGTTGATAACTAACCAAAGTAGATGCCTGCAG...GTCATTGATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAACATATTCACCAGGTTaGACATCTGGGTCAATCGTA +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKTYSPG*TSGSIV
Trigger: TACGATTGACCCAGATGTCAAACCTGGTGAATATGT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTCATCTAGAAGCTTTTTaGATCTGGAGCTTGTACTTT +
Preference number: 5 (lower is better)
Translates to: CEMAALLFPKLILEEVELHLEAF*IWSLYF
Trigger: AAAGTACAAGCTCCAGATCAAAAAAGCTTCTAGATG...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATATCTTCACAAATATATaGAGAGGTGTGTCACGAGGA +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYIFTNI*RGVSRG
Trigger: TCCTCGTGACACACCTCTCAATATATTTGTGAAGAT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTACAACAACTGAAGTCTaGTGTATGCAAACATCCAAG +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVTTTEV*CMQTSK
Trigger: CTTGGATGTTTGCATACACAAGACTTCAGTTGTTGT...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGTTCATCGCCATACTTaGCTGTCATATACATCAGAT +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYVHRHT*LSYTSD
Trigger: ATCTGATGTATATGACAGCAAAGTATGGCGATGAAC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATATTATTTTCAGGTTTTaGGGCCAGCCATCTGCAAGT +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYIIFRF*GQPSAS
Trigger: ACTTGCAGATGGCTGGCCCAAAAACCTGAAAATAAT...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTCTGTTAGCTGCATACTaGTTTCCCATTATAGGATCA +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLLAAY*FPIIGS
Trigger: TGATCCTATAATGGGAAACAAGTATGCAGCTAACAG...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAAGATTCCTGCTGTTCTaGAATTATATAGGATCCTTC +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVRFLLF*NYIGSF
Trigger: GAAGGATCCTATATAATTCAAGAACAGCAGGAATCT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATCCAAAACACCAAACTaGAGTGTTTCCAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSKTPN*SVSSKP
Trigger: TGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATTCCAAAACACCAAACTaGAGTGTTTCCAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYSKTPN*SVSSKP
Trigger: TGGTTTGCTGGAAACACTCAAGTTTGGTGTTTTGGA...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTTGTATCCAGGTGTTCTaGCAACTCCAAAACACCAAA +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSCIQVF*QLQNTK
Trigger: TTTGGTGTTTTGGAGTTGCAAGAACACCTGGATACA...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGCTTCTCTTTTCACATaGTATGTATCCAGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVASLFT*YVSRCS
Trigger: AGAACACCTGGATACATACAATGTGAAAAGAGAAGC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGTAGTTTGTGCAGCTTaGGAAATGTCAATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVVVCAA*EMSISS
Trigger: CGAAGAAATTGACATTTCCAAAGCTGCACAAACTAC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAGTAGTTTGTGCAGCTTaGGAAATGTCAATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKVVCAA*EMSISS
Trigger: CGAAGAAATTGACATTTCCAAAGCTGCACAAACTAC...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AATGAAACAGCCTTGATTTCAGCCTCATTTCACCTGCTTTTGGTTGTTTCAGTAAGTTTCTATAGTAGTTaGTGCAGCTTTGGAAATGTC +
Preference number: 5 (lower is better)
Translates to: NETALISASFHLLLVVSVSFYSS*CSFGNV
Trigger: GACATTTCCAAAGCTGCACAAACTACTATAGAAACT...TACTGAAACAACCAAAAGCAGGTGAAATGAGGCTGAAATCAAGGCTGTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTTGGTTGTTTCAGTATaGGAGGCCATTATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGLVVSV*EAIIAN
Trigger: GTTTGCAATAATGGCCTCCAATACTGAAACAACCAA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TCTTTTCTTGAATTCTGCAGACTTCAAAGCCTGCAAGTCATATATTCCATCATCTCATTTCACCTGCTTTaGGTTGTTTCAGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: SFLEFCRLQSLQVIYSIISFHLL*VVSVLE
Trigger: CTCCAATACTGAAACAACCAAAAGCAGGTGAAATGA...GATGATGGAATATATGACTTGCAGGCTTTGAAGTCTGCAGAATTCAAGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp CAAGAATTCCTTGACACACAAGAGATTCCTGCTGTTCTTGAATTATATAGGATCTCATTTCACCTGCTTTaGGTTGTTTCAGTATTGGAG +
Preference number: 5 (lower is better)
Translates to: QEFLDTQEIPAVLELYRISFHLL*VVSVLE
Trigger: CTCCAATACTGAAACAACCAAAAGCAGGTGAAATGA...GATCCTATATAATTCAAGAACAGCAGGAATCTCTTGTGTGTCAAGGAATTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS-3UTR CAA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATACTGCAGGCATCTACTTaGGTTAGTTATCAACAATCA +
Preference number: 5 (lower is better)
Translates to: ILNSGITEPSLKEKSQWILQAST*VSYQQS
Trigger: TGATTGTTGATAACTAACCAAAGTAGATGCCTGCAG...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TGTGAAATGGCAGCACTGTTATTTCCTAAGCTGATACTAGAAGAGGTAGAACTTTTTGTACACCTATTCTaGTATAACAACAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: CEMAALLFPKLILEEVELFVHLF*YNNSAW
Trigger: CCATGCACTGTTGTTATACAAGAATAGGTGTACAAA...AAGTTCTACCTCTTCTAGTATCAGCTTAGGAAATAACAGTGCTGCCATTTCACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503238.6
CDS TCA 90 bp AGTGTAACAGCCTGTCCATATACAACACCAAACTTAAAGTTAACTTaGAGTTCTAGGATTGGTTGTAGACCTAGACTTTTATCTCCATTC +
Preference number: 5 (lower is better)
Translates to: SVTACPYTTPNLKLT*SSRIGCRPRLLSPF
Trigger: GAATGGAGATAAAAGTCTAGGTCTACAACCAATCCTAGAACTTCAAGTTAACTTTAAGTTTGGTGTTGTATATGGACAGGCTGTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503339.5
CDS-3UTR CAA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCATCTAGAAGCTTTTTaGATCTGGAGCTTGTACTTT +
Preference number: 5 (lower is better)
Translates to: SVNARVHKRCLVNILHHLHLEAF*IWSLYF
Trigger: AAAGTACAAGCTCCAGATCAAAAAAGCTTCTAGATG...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000503238.6
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATGTCATATACATCAGATaGTTCAAAACCATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYVIYIR*FKTIAV
Trigger: CACTGCAATGGTTTTGAACAATCTGATGTATATGAC...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp ATTCTAAACTCTGGAATCACAGAGCCCAGTTTAAAAGAAAAGTCACAGTGGATAGTTCGGATGTTACTATaGGGTCCCATTACTATTAAT +
Preference number: 5 (lower is better)
Translates to: ILNSGITEPSLKEKSQWIVRMLL*GPITIN
Trigger: ATTAATAGTAATGGGACCCAATAGTAACATCCGAAC...TATCCACTGTGACTTTTCTTTTAAACTGGGCTCTGTGATTCCAGAGTTTAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTGTTCGGATGTTACTATaGGGTCCCATTACTATTAAT +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVVRMLL*GPITIN
Trigger: ATTAATAGTAATGGGACCCAATAGTAACATCCGAAC...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTATCCCACATACTGAAAAATCAATGGTTTTTGCAAACGAGTCTTGATGCGTATCTGTTAGCTGCATACTaGTTTCCCATTATAGGATCA +
Preference number: 5 (lower is better)
Translates to: LSHILKNQWFLQTSLDAYLLAAY*FPIIGS
Trigger: TGATCCTATAATGGGAAACAAGTATGCAGCTAACAG...ATACGCATCAAGACTCGTTTGCAAAAACCATTGATTTTTCAGTATGTGGGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCTGTTAGCTGCATACTaGTTTCCCATTATAGGATCA +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSLLAAY*FPIIGS
Trigger: TGATCCTATAATGGGAAACAAGTATGCAGCTAACAG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp AACATAAGCACTGATCAGAGAACTGAGCAGCATTCCAATAACGTTAACAGATATAGATTCCTGCTGTTCTaGAATTATATAGGATCCTTC +
Preference number: 5 (lower is better)
Translates to: NISTDQRTEQHSNNVNRYRFLLF*NYIGSF
Trigger: GAAGGATCCTATATAATTCAAGAACAGCAGGAATCT...ATATCTGTTAACGTTATTGGAATGCTGCTCAGTTCTCTGATCAGTGCTTATGTT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp CACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGATTCCTGCTGTTCTaGAATTATATAGGATCCTTC +
Preference number: 5 (lower is better)
Translates to: HISIHPNSHTHNSLYRPKRFLLF*NYIGSF
Trigger: GAAGGATCCTATATAATTCAAGAACAGCAGGAATCT...TTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTGTAGTTTGTGCAGCTTaGGAAATGTCAATTTCTTCG +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSVVCAA*EMSISS
Trigger: CGAAGAAATTGACATTTCCAAAGCTGCACAAACTAC...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTAGTTTCTATAGTAGTTaGTGCAGCTTTGGAAATGTC +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGSFYSS*CSFGNV
Trigger: GACATTTCCAAAGCTGCACAAACTACTATAGAAACT...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTTATTGGAGGCCATTATaGCAAACATTCTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVYWRPL*QTFLEF
Trigger: GAATTCCAAGAATGTTTGCAATAATGGCCTCCAATA...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TTAGTTACACTAAAAAGTAGATGCTGCCAGAAAGTTATCAGTGAATGCAAGGGTTATTGGAGGCCATTATaGCAAACATTCTTGGAATTC +
Preference number: 5 (lower is better)
Translates to: LVTLKSRCCQKVISECKGYWRPL*QTFLEF
Trigger: GAATTCCAAGAATGTTTGCAATAATGGCCTCCAATA...ACCCTTGCATTCACTGATAACTTTCTGGCAGCATCTACTTTTTAGTGTAACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAATTGGTTGTTTCAGTATaGGAGGCCATTATTGCAAAC +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKLVVSV*EAIIAN
Trigger: GTTTGCAATAATGGCCTCCAATACTGAAACAACCAA...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp TCAGTGAATGCAAGGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTTTTGTACACCTATTCTaGTATAACAACAGTGCATGG +
Preference number: 5 (lower is better)
Translates to: SVNARVHKRCLVNILHHLFVHLF*YNNSAW
Trigger: CCATGCACTGTTGTTATACAAGAATAGGTGTACAAA...AAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCCTTGCATTCACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
CDS-3UTR CAA 90 bp TTCTTCACGCAGTTATTGTGGGAGATATTGGCAGCTGTTAAAATATCAGATGTTCTTTCAAATCAGGAGTaGTGGGACTACATTCTTTTT +
Preference number: 5 (lower is better)
Translates to: FFTQLLWEILAAVKISDVLSNQE*WDYILF
Trigger: AAAAAGAATGTAGTCCCACAACTCCTGATTTGAAAG...AACATCTGATATTTTAACAGCTGCCAATATCTCCCACAATAACTGCGTGAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAGTTCGGATGTTACTATaGGGTCCCATTACTATTAAT +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKVRMLL*GPITIN
Trigger: ATTAATAGTAATGGGACCCAATAGTAACATCCGAAC...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp ACATATCCATACATCCCAACTCACACACACATAATTCCTTATACAGACCAAAAAAGTTTCTATAGTAGTTaGTGCAGCTTTGGAAATGTC +
Preference number: 5 (lower is better)
Translates to: TYPYIPTHTHIIPYTDQKSFYSS*CSFGNV
Trigger: GACATTTCCAAAGCTGCACAAACTACTATAGAAACT...TTTTTGGTCTGTATAAGGAATTATGTGTGTGTGAGTTGGGATGTATGGATATGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507873.7
ENST00000641795.1
CDS-3UTR CAA 90 bp GGGTCCATAAAAGGTGCTTGGTTAATATTCTTCATCATCTTCAGTTTAGTTTCTCTTTCAAATCAGGAGTaGTGGGACTACATTCTTTTT +
Preference number: 5 (lower is better)
Translates to: GSIKGAWLIFFIIFSLVSLSNQE*WDYILF
Trigger: AAAAAGAATGTAGTCCCACAACTCCTGATTTGAAAG...AGAAACTAAACTGAAGATGATGAAGAATATTAACCAAGCACCTTTTATGGACCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358350.9
ENST00000507873.7
CDS CAA 72 bp GCAGCAGCAGAAGCAGAAGCAGCAGCAGCAGCGGTTTaGCCGTTCTGTCTCTCCAAGCCGCTGTCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: AAAEAEAAAAAV*PFCLSKPLSLL
Trigger: GAGAAGGGACAGCGGCTTGGAGAGACAGAACGGCAAAACCGCTGCTGCTGCTGCTTCTGCTTCTGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302806.5
ENST00000673760.1
CDS GCA 72 bp CAGCAGCAGAAGCAGAAGCAGCAGCAGCAGCGGTTTTaGCGTTCTGTCTCTCCAAGCCGCTGTCCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: QQQKQKQQQQRF*RSVSPSRCPFS
Trigger: AGAGAAGGGACAGCGGCTTGGAGAGACAGAACGGCAAAACCGCTGCTGCTGCTGCTTCTGCTTCTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302806.5
ENST00000673760.1
CDS TCA 72 bp GGGACACATGAGGCAATCTGTCAGTGCAAGGTGATGTaGATCAGTGCTCCTGCTGATCCTCATGAACACCAA +
Preference number: 6 (lower is better)
Translates to: GTHEAICQCKVM*ISAPADPHEHQ
Trigger: TTGGTGTTCATGAGGATCAGCAGGAGCACTGATTCACATCACCTTGCACTGACAGATTGCCTCATGTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS CAA 90 bp GAGGAGAACATCTCACAGAACCTGCAGATGTGGAAGATGACGATGTaGCTGCACTGCAGCAAAGGATCAGATAGTTTCTCCACAGGCCAA +
Preference number: 6 (lower is better)
Translates to: EENISQNLQMWKMTM*LHCSKGSDSFSTGQ
Trigger: TTGGCCTGTGGAGAAACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCACATCTGCAGGTTCTGTGAGATGTTCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS TCA 72 bp ACTCGAGTGGGCACACTGGTACAAAGCAGTAGTGAGTaGGTCACCGTGTGTGAAGCAGAATATGGAATGTTC +
Preference number: 6 (lower is better)
Translates to: TRVGTLVQSSSE*VTVCEAEYGMF
Trigger: GAACATTCCATATTCTGCTTCACACACGGTGACTCACTCACTACTGCTTTGTACCAGTGTGCCCACTCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000505437.5
ENST00000507711.5
ENST00000515684.1
CDS TCA 72 bp TCTATGGGACACATGAGGCAATCTGTCAGTGCAAGGTaGTGTGAATCAGTGCTCCTGCTGATCCTCATGAAC +
Preference number: 6 (lower is better)
Translates to: SMGHMRQSVSAR*CESVLLLILMN
Trigger: GTTCATGAGGATCAGCAGGAGCACTGATTCACATCACCTTGCACTGACAGATTGCCTCATGTGTCCCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS GCA 72 bp AACCTGCAGATGTGGAAGATGACGATGTTGCTGCACTaGAGCAAAGGATCAGATAGTTTCTCCACAGGCCAA +
Preference number: 6 (lower is better)
Translates to: NLQMWKMTMLLH*SKGSDSFSTGQ
Trigger: TTGGCCTGTGGAGAAACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCACATCTGCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS GCA 72 bp TTCGTACCAGTTGTACTCGTAAAATGTCTCGACGCCTaGGCCGTTTCATATTCTCTGGCCTTCTTTCGAGTG +
Preference number: 6 (lower is better)
Translates to: FVPVVLVKCLDA*AVSYSLAFFRV
Trigger: CACTCGAAAGAAGGCCAGAGAATATGAAACGGCGCAGGCGTCGAGACATTTTACGAGTACAACTGGTACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
CDS TCA 72 bp AGGAGAACATCTCACAGAACCTGCAGATGTGGAAGATaGCGATGTTGCTGCACTGCAGCAAAGGATCAGATA +
Preference number: 6 (lower is better)
Translates to: RRTSHRTCRCGR*RCCCTAAKDQI
Trigger: TATCTGATCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCACATCTGCAGGTTCTGTGAGATGTTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS TCA 72 bp GGTTGGTCCTGCCAAGACCTAGAACAAGGGATTCTGTaGTTTCCATGCTCTCAGAACGCATCATTGGAACTA +
Preference number: 6 (lower is better)
Translates to: GWSCQDLEQGIL*FPCSQNASLEL
Trigger: TAGTTCCAATGATGCGTTCTGAGAGCATGGAAATCACAGAATCCCTTGTTCTAGGTCTTGGCAGGACCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
CDS GCA 72 bp ACTCCTGTTGTTGGCATGGGTGGTTCACCATCTTTCTaGTGCAAACTGTCTGCTATTACAAGGAAGACTCTG +
Preference number: 6 (lower is better)
Translates to: TPVVGMGGSPSF*CKLSAITRKTL
Trigger: CAGAGTCTTCCTTGTAATAGCAGACAGTTTGCAGCAGAAAGATGGTGAACCACCCATGCCAACAACAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS GCA 72 bp ATCGACCTGAGGGGACAACAACTGAAGTCTTGTGTATaGAAACATCCAAGCATAGCTCACAGCTGTAGAGCA +
Preference number: 6 (lower is better)
Translates to: IDLRGQQLKSCV*KHPSIAHSCRA
Trigger: TGCTCTACAGCTGTGAGCTATGCTTGGATGTTTGCATACACAAGACTTCAGTTGTTGTCCCCTCAGGTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS CCA 72 bp TCCCCTTTAAGGAATAATCCGATCGGAACCGATCTGTaGTTAAACCTCCCTCCGACTCTGATTTTAACCGGA +
Preference number: 6 (lower is better)
Translates to: SPLRNNPIGTDL*LNLPPTLILTG
Trigger: TCCGGTTAAAATCAGAGTCGGAGGGAGGTTTAACCACAGATCGGTTCCGATCGGATTATTCCTTAAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000358350.9
ENST00000502520.5
ENST00000503238.6
ENST00000505437.5
ENST00000507711.5
ENST00000509886.5
ENST00000514783.5
CDS CAA 72 bp ATCTCACAGAACCTGCAGATGTGGAAGATGACGATGTaGCTGCACTGCAGCAAAGGATCAGATAGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: ISQNLQMWKMTM*LHCSKGSDSFS
Trigger: GGAGAAACTATCTGATCCTTTGCTGCAGTGCAGCAACATCGTCATCTTCCACATCTGCAGGTTCTGTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS GCA 72 bp CCCGTAATCATGTCTTCAGGCTCCTTATTAGACATCTaGACACTGGTCATACACATTGGTCTCCCAACTTCT +
Preference number: 6 (lower is better)
Translates to: PVIMSSGSLLDI*TLVIHIGLPTS
Trigger: AGAAGTTGGGAGACCAATGTGTATGACCAGTGTGCAGATGTCTAATAAGGAGCCTGAAGACATGATTACGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS CCA 72 bp GATCAAACTGAAGATCTTCACCCCTCTGAAGAGATCTaGACAATAGCTTCTCCAAGGGTTCGGCCATTACAA +
Preference number: 6 (lower is better)
Translates to: DQTEDLHPSEEI*TIASPRVRPLQ
Trigger: TTGTAATGGCCGAACCCTTGGAGAAGCTATTGTCCAGATCTCTTCAGAGGGGTGAAGATCTTCAGTTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302806.5
ENST00000358350.9
ENST00000503238.6
ENST00000505759.1
ENST00000507711.5
ENST00000673760.1
CDS CCA 72 bp CTACAGAGAATGACAAGCGCAAAGCCTTCAACCACATaGAATACATTGGAATATGGGCTCCTTTCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: LQRMTSAKPSTT*NTLEYGLLSRG
Trigger: TCCTCTGGAAAGGAGCCCATATTCCAATGTATTCCATGTGGTTGAAGGCTTTGCGCTTGTCATTCTCTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS CAA 72 bp CTGAGAATATGGCGAGAGTTAGCTCAGGATACGCCCTaGCTAGTTCCTCGGACAACTGATAATATGAAACAG +
Preference number: 6 (lower is better)
Translates to: LRIWRELAQDTP*LVPRTTDNMKQ
Trigger: CTGTTTCATATTATCAGTTGTCCGAGGAACTAGCAAGGGCGTATCCTGAGCTAACTCTCGCCATATTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507711.5
ENST00000514617.5
CDS CAA 90 bp GGCTTATCTCTGAGAATATGGCGAGAGTTAGCTCAGGATACGCCCTaGCTAGTTCCTCGGACAACTGATAATATGAAACAGAATAGAGAT +
Preference number: 6 (lower is better)
Translates to: GLSLRIWRELAQDTP*LVPRTTDNMKQNRD
Trigger: ATCTCTATTCTGTTTCATATTATCAGTTGTCCGAGGAACTAGCAAGGGCGTATCCTGAGCTAACTCTCGCCATATTCTCAGAGATAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000507711.5
ENST00000514617.5
CDS GCA 72 bp CCATATCCAGTCCTTAGCTCTTCCTATCCTAGTGACTaGTGCCTTAAGGTCTTAGTATCTCAGTTAAACCAA +
Preference number: 6 (lower is better)
Translates to: PYPVLSSSYPSD*CLKVLVSQLNQ
Trigger: TTGGTTTAACTGAGATACTAAGACCTTAAGGCAGCAGTCACTAGGATAGGAAGAGCTAAGGACTGGATATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302806.5
CDS GCA 72 bp ATTTCCATGCTCTCAGAACGCATCATTGGAACTATGTaGTTAAACAAGGATGAAGGGGATGGGATGCCAATA +
Preference number: 6 (lower is better)
Translates to: ISMLSERIIGTM*LNKDEGDGMPI
Trigger: TATTGGCATCCCATCCCCTTCATCCTTGTTTAAGCACATAGTTCCAATGATGCGTTCTGAGAGCATGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
CDS CCA 72 bp CTCCTTATTAGACATCTGCACACTGGTCATACACATTaGTCTCCCAACTTCTTTGTCCAAATGTCTGAGGAT +
Preference number: 6 (lower is better)
Translates to: LLIRHLHTGHTH*SPNFFVQMSED
Trigger: ATCCTCAGACATTTGGACAAAGAAGTTGGGAGACCAATGTGTATGACCAGTGTGCAGATGTCTAATAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS CCA 72 bp AGAGGATGTGGAGAAACAGGAATGCTTTTACGCTGTTaGTGGGAGTGTAAATTAGTTCAACCATTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: RGCGETGMLLRC*WECKLVQPLWK
Trigger: CTTCCACAATGGTTGAACTAATTTACACTCCCACCAACAGCGTAAAAGCATTCCTGTTTCTCCACATCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509886.5
ENST00000514783.5
CDS CAA 72 bp GTATCTATCCCATTCAAGTGCAAGCTCATGAGTTTATaGCCTAAAACAGTGCCAGCACACAGTAGGCATTCT +
Preference number: 6 (lower is better)
Translates to: VSIPFKCKLMSL*PKTVPAHSRHS
Trigger: AGAATGCCTACTGTGTGCTGGCACTGTTTTAGGCAATAAACTCATGAGCTTGCACTTGAATGGGATAGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302806.5
CDS CAA 72 bp ACACCAAGTTTGGAAAGGATCCATCTAGAAGCTTTTTaGATCTGGAGCTTGTACTTTACAGGCACTCGAGTG +
Preference number: 6 (lower is better)
Translates to: TPSLERIHLEAF*IWSLYFTGTRV
Trigger: CACTCGAGTGCCTGTAAAGTACAAGCTCCAGATCAAAAAAGCTTCTAGATGGATCCTTTCCAAACTTGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000505437.5
ENST00000507711.5
ENST00000515684.1
CDS CAA 72 bp TATTTATATCGACCTGAGGGGACAACAACTGAAGTCTaGTGTATGCAAACATCCAAGCATAGCTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: YLYRPEGTTTEV*CMQTSKHSSQL
Trigger: CAGCTGTGAGCTATGCTTGGATGTTTGCATACACAAGACTTCAGTTGTTGTCCCCTCAGGTCGATATAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS TCA 72 bp AATCTGGAAAATCAAGCATTAGTGCCTGCAGAGTATTaGAAGCCAGAGCACGCAGTTCTTCATCCATATGAA +
Preference number: 6 (lower is better)
Translates to: NLENQALVPAEY*KPEHAVLHPYE
Trigger: TTCATATGGATGAAGAACTGCGTGCTCTGGCTTTCAATACTCTGCAGGCACTAATGCTTGATTTTCCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS TCA 72 bp ATGAAATCGACTAGAAAAACACCCACACCCCCAAACTaGAACAAGGACAAGGACATGAACAAGCAAGTTACA +
Preference number: 6 (lower is better)
Translates to: MKSTRKTPTPPN*NKDKDMNKQVT
Trigger: TGTAACTTGCTTGTTCATGTCCTTGTCCTTGTTTCAGTTTGGGGGTGTGGGTGTTTTTCTAGTCGATTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514783.5
CDS CCA 72 bp CAGGTCAGTTCTGCTCATACCGTCAGGAATCAACCTTaGAATCGCAGCAATACAAGTTCTAAACAAATCAAT +
Preference number: 6 (lower is better)
Translates to: QVSSAHTVRNQP*NRSNTSSKQIN
Trigger: ATTGATTTGTTTAGAACTTGTATTGCTGCGATTCCAAGGTTGATTCCTGACGGTATGAGCAGAACTGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS CCA 72 bp GGTGTTCGTATTTGTCATAATTACTATGACAGAAATTaGTTCCACCTTGCTCATCCACCGTCTTCTCAGATG +
Preference number: 6 (lower is better)
Translates to: GVRICHNYYDRN*FHLAHPPSSQM
Trigger: CATCTGAGAAGACGGTGGATGAGCAAGGTGGAACCAATTTCTGTCATAGTAATTATGACAAATACGAACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505759.1
CDS CAA 72 bp TCTGCAAAGAGGCTCTTGATGACATATTCACCAGGTTaGACATCTGGGTCAATCGTAATGTTTGACATGATG +
Preference number: 6 (lower is better)
Translates to: SAKRLLMTYSPG*TSGSIVMFDMM
Trigger: CATCATGTCAAACATTACGATTGACCCAGATGTCAAACCTGGTGAATATGTCATCAAGAGCCTCTTTGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000302806.5
ENST00000358350.9
ENST00000503238.6
ENST00000505759.1
ENST00000507711.5
ENST00000673760.1
CDS CAA 72 bp TGCACACTGGTCATACACATTGGTCTCCCAACTTCTTaGTCCAAATGTCTGAGGATGCTATCTAATGCTTTT +
Preference number: 6 (lower is better)
Translates to: CTLVIHIGLPTS*SKCLRMLSNAF
Trigger: AAAAGCATTAGATAGCATCCTCAGACATTTGGACAAAGAAGTTGGGAGACCAATGTGTATGACCAGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000506685.1
ENST00000507711.5
ENST00000673760.1
CDS TCA 72 bp TTTACTGTGTATCTATCCCATTCAAGTGCAAGCTCATaGGTTTATTGCCTAAAACAGTGCCAGCACACAGTA +
Preference number: 6 (lower is better)
Translates to: FTVYLSHSSASS*VYCLKQCQHTV
Trigger: TACTGTGTGCTGGCACTGTTTTAGGCAATAAACTCATGAGCTTGCACTTGAATGGGATAGATACACAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302806.5
CDS CCA 72 bp CTTGTGCATCTGTGTTTATCCTATACATGTCTTCTTTaGCACCAAATGTCCTCTTACAATCATCTAGCCACT +
Preference number: 6 (lower is better)
Translates to: LVHLCLSYTCLL*HQMSSYNHLAT
Trigger: AGTGGCTAGATGATTGTAAGAGGACATTTGGTGCCAAAGAAGACATGTATAGGATAAACACAGATGCACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000503339.5
ENST00000507873.7
ENST00000512810.1
CDS CAA 90 bp CAGGATGATTTCTTATCAGTCTTTGAAGATTTCTGCAACTGGCTTTaGCAGTTTGGTTGGCCTGTTTTCATTTTGTCTTCACAGAAACAG +
Preference number: 6 (lower is better)
Translates to: QDDFLSVFEDFCNWL*QFGWPVFILSSQKQ
Trigger: CTGTTTCTGTGAAGACAAAATGAAAACAGGCCAACCAAACTGCAAAAGCCAGTTGCAGAAATCTTCAAAGACTGATAAGAAATCATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511343.1
CDS CAA 90 bp GCTTCCAGGAGTTGTCTAGTTAAATCTACATATTCCAATAAAGTGTaGTTGAGAAAATGTGTTTCATTATCAAGGCCACCACTTGCACTG +
Preference number: 6 (lower is better)
Translates to: ASRSCLVKSTYSNKV*LRKCVSLSRPPLAL
Trigger: CAGTGCAAGTGGTGGCCTTGATAATGAAACACATTTTCTCAACAACACTTTATTGGAATATGTAGATTTAACTAGACAACTCCTGGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
CDS TCA 72 bp AGAACGCATCATTGGAACTATGTGCTTAAACAAGGATaGAGGGGATGGGATGCCAATAATTTTAGAATCAAT +
Preference number: 6 (lower is better)
Translates to: RTHHWNYVLKQG*RGWDANNFRIN
Trigger: ATTGATTCTAAAATTATTGGCATCCCATCCCCTTCATCCTTGTTTAAGCACATAGTTCCAATGATGCGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
CDS CAA 90 bp CTAAAACATGAAAGAATCTCACAAAATACCTATAGAATTAAACTGTaGTTCCTTAGACTCTATGGGACACATGAGGCAATCTGTCAGTGC +
Preference number: 6 (lower is better)
Translates to: LKHERISQNTYRIKL*FLRLYGTHEAICQC
Trigger: GCACTGACAGATTGCCTCATGTGTCCCATAGAGTCTAAGGAACAACAGTTTAATTCTATAGGTATTTTGTGAGATTCTTTCATGTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513401.5
CDS GCA 72 bp TATTCATATCTTTACTGTGTATCTATCCCATTCAAGTaGAAGCTCATGAGTTTATTGCCTAAAACAGTGCCA +
Preference number: 6 (lower is better)
Translates to: YSYLYCVSIPFK*KLMSLLPKTVP
Trigger: TGGCACTGTTTTAGGCAATAAACTCATGAGCTTGCACTTGAATGGGATAGATACACAGTAAAGATATGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302806.5
CDS CCA 72 bp AATATCCATATATGTGATGGACTAATCACATCAAACTaGTGGCTAATAGGAGAAGAGTTCCATTCTGCTAAA +
Preference number: 6 (lower is better)
Translates to: NIHICDGLITSN*WLIGEEFHSAK
Trigger: TTTAGCAGAATGGAACTCTTCTCCTATTAGCCACCAGTTTGATGTGATTAGTCCATCACATATATGGATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358350.9
ENST00000503238.6
ENST00000507711.5
ENST00000673760.1
CDS CAA 72 bp CTTGCAAGTGGCAGTTTCCTAATATTCTGGCATATTTaGTCAACATCGCTTGTCAGTCACATTTCTATAATA +
Preference number: 6 (lower is better)
Translates to: LASGSFLIFWHI*STSLVSHISII
Trigger: TATTATAGAAATGTGACTGACAAGCGATGTTGACAAAATATGCCAGAATATTAGGAAACTGCCACTTGCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513401.5