RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRY (Homo sapiens)

Ensembl gene IDs: ENSG00000073910

Ensembl transcript IDs: ENST00000380217.1, ENST00000428783.1, ENST00000436046.1, ENST00000441659.1, ENST00000463566.1, ENST00000477712.2, ENST00000490410.1, ENST00000542859.6, ENST00000641614.1, ENST00000642040.1, ENST00000643293.1, ENST00000645780.1, ENST00000647500.1

Found 1969 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCTCTaGACGCTCTCTTCACTCATTTCACCCGGTCATTGGCTTCCTTGC +
Preference number: 1 (lower is better)
Translates to: GQSPAVAHRAFGCPL*TLSSLISPGHWLPC
Trigger: GCAAGGAAGCCAATGACCGGGTGAAATGAGTGAAGAGAGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR GCA 90 bp AGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTaGTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTG +
Preference number: 1 (lower is better)
Translates to: SMSLPCPQTFSGFPS*SARDKVLPWPTELL
Trigger: CAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 90 bp CTTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTaGCTGTCCTCTCTGAACGCTCTCTTCACTCATTTCACCCGGTCA +
Preference number: 1 (lower is better)
Translates to: LAQQGTKSCRGPQSF*LSSLNALFTHFTRS
Trigger: TGACCGGGTGAAATGAGTGAAGAGAGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 90 bp TTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCTGCCGTaGCCCACAGAGCTTTTGGCTGTCCTCTCTGAACGCTCTCTTCAC +
Preference number: 1 (lower is better)
Translates to: FSGFPSCSARDKVLP*PTELLAVLSERSLH
Trigger: GTGAAGAGAGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR TCA 90 bp GAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTG +
Preference number: 1 (lower is better)
Translates to: ENSLSKPFEGREDTE*RCPSMAALPVWNPV
Trigger: CACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR TCA 90 bp AAAGAGATAATACTTACCTCCAGCTTCACAGGGCCATGCATGGCATaGCCCCCACGGGTGCCATTCAGATCATACATGCGAGGGGTGCCC +
Preference number: 1 (lower is better)
Translates to: KEIILTSSFTGPCMA*PPRVPFRSYMRGVP
Trigger: GGGCACCCCTCGCATGTATGATCTGAATGGCACCCGTGGGGGTCATGCCATGCATGGCCCTGTGAAGCTGGAGGTAAGTATTATCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR GCA 90 bp AAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCTaGCGTGGCCCACAGAGCTTTTGGCTGTCCTCTCTGAACGCTCTC +
Preference number: 1 (lower is better)
Translates to: KHSVASHLAQQGTKS*RGPQSFWLSSLNAL
Trigger: GAGAGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR TCA 90 bp CTCTTCACTCATTTCACCCGGTCATTGGCTTCCTTGCTGTCCCTTTaGCAAAGTGACCCTGCTTCTCCTTCAGGGTCTCTGCATGTGTTT +
Preference number: 1 (lower is better)
Translates to: LFTHFTRSLASLLSL*QSDPASPSGSLHVF
Trigger: AAACACATGCAGAGACCCTGAAGGAGAAGCAGGGTCACTTTGTCAAAGGGACAGCAAGGAAGCCAATGACCGGGTGAAATGAGTGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 90 bp GCATCCACAAAAAGTGTAGGACATTCAGAGCAGGAGGTGAGCATCTaGGAAGAGCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCT +
Preference number: 1 (lower is better)
Translates to: ASTKSVGHSEQEVSI*EELTNLDPIPRRLS
Trigger: AGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTCCCAGATGCTCACCTCCTGCTCTGAATGTCCTACACTTTTTGTGGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477712.2
3UTR GCA 90 bp AGTCGGCTTTGGTATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGTAACACATTTGTGCCACACAGCATG +
Preference number: 1 (lower is better)
Translates to: SRLWYATEVTSSVAS*ICSVKCNTFVPHSM
Trigger: CATGCTGTGTGGCACAAATGTGTTACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATACCAAAGCCGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR TCA 90 bp GTGGTTCTCTGCTGGGTAAGAAGCCATGGTAGAAAACTCAGTTCATaGCGAATCTGTTCTTTCTACTGTGGCTCCCAACAAAACTCTCTG +
Preference number: 1 (lower is better)
Translates to: VVLCWVRSHGRKLSS*RICSFYCGSQQNSL
Trigger: CAGAGAGTTTTGTTGGGAGCCACAGTAGAAAGAACAGATTCGTCATGAACTGAGTTTTCTACCATGGCTTCTTACCCAGCAGAGAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 90 bp AAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGC +
Preference number: 1 (lower is better)
Translates to: KIVSRKEGTVQCSRL*YATEVTSSVASCIC
Trigger: GCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR TCA 90 bp ATGCAACCAGAGATTAATTTGAGAAGTATTCAGCATTTCCCTAGGTaGTGTCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCA +
Preference number: 1 (lower is better)
Translates to: MQPEINLRSIQHFPR*CRCLLANTVTFAHP
Trigger: TGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGACATCACCTAGGGAAATGCTGAATACTTCTCAAATTAATCTCTGGTTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR TCA 90 bp CATGACGAATCTGTTCTTTCTACTGTGGCTCCCAACAAAACTCTCTaGAAGTTGTCTACTGTGGTTAGCCACAGAAACCTTTATTTTATG +
Preference number: 1 (lower is better)
Translates to: HDESVLSTVAPNKTL*KLSTVVSHRNLYFM
Trigger: CATAAAATAAAGGTTTCTGTGGCTAACCACAGTAGACAACTTTCAGAGAGTTTTGTTGGGAGCCACAGTAGAAAGAACAGATTCGTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR GCA 90 bp AATTTTAATCAAGTGATGTCTAAGTTACAGAGCGCCTGTCTGGATTaGTTTATTCTGCAGGTGGATACAAAGTGTATCATGTTTCAGTGC +
Preference number: 1 (lower is better)
Translates to: NFNQVMSKLQSACLD*FILQVDTKCIMFQC
Trigger: GCACTGAAACATGATACACTTTGTATCCACCTGCAGAATAAAGCAATCCAGACAGGCGCTCTGTAACTTAGACATCACTTGATTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 90 bp TCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTaGTACTTCTACTTCTTTGTATCCCTGGGGAAGGCAATTAACATT +
Preference number: 1 (lower is better)
Translates to: SFLSLRHLLNIYPFL*YFYFFVSLGKAINI
Trigger: AATGTTAATTGCCTTCCCCAGGGATACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGGGCCATGCATGGCATaGCCCCCACGGGTGCCATTC +
Preference number: 2 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPGPCMA*PPRVPF
Trigger: GAATGGCACCCGTGGGGGTCATGCCATGCATGGCCC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CAA 90 bp CAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCCATCTaGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTT +
Preference number: 2 (lower is better)
Translates to: QHVTTLPANIQWLPI*LSKGQSPAVAHRAF
Trigger: AAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGCACGTGTAAGCTATTaGTGTAAGCAGCCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPARVSY*CKQPGG
Trigger: ACCTCCAGGCTGCTTACATCAATAGCTTACACGTGC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTCCTTGCTGTCCCTTTaGCAAAGTGACCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPSLLSL*QSDPAS
Trigger: AGAAGCAGGGTCACTTTGTCAAAGGGACAGCAAGGA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCAGCTTCATTTTGCCTaGCCCTTTCTCAGCCCACGA +
Preference number: 2 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVQLHFA*PFLSPR
Trigger: TCGTGGGCTGAGAAAGGGGCAGGCAAAATGAAGCTG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTGGGCTCTGCTGGCGTaGGGCTGCATCCTACACAAT +
Preference number: 2 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNWALLA*GCILHN
Trigger: ATTGTGTAGGATGCAGCCCCACGCCAGCAGAGCCCA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTCCTTGCTGTCCCTTTaGCAAAGTGACCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSLLSL*QSDPAS
Trigger: AGAAGCAGGGTCACTTTGTCAAAGGGACAGCAAGGA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTGGCCAGCTTCATTTTaGCTGCCCCTTTCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNWPASF*LPLSQP
Trigger: GGGCTGAGAAAGGGGCAGGCAAAATGAAGCTGGCCA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CAA 90 bp AAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTaGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAG +
Preference number: 2 (lower is better)
Translates to: KALQVTRGRTVCPSL*KAEKTLNDVAPAWQ
Trigger: CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTAGTGCTAGAAAACAGTaGGACACAAGGAGGCATCTT +
Preference number: 2 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPSARKQ*DTRRHL
Trigger: AAGATGCCTCCTTGTGTCTCACTGTTTTCTAGCACT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCTCACCGATGTTAGATaGGTTAGAGGTGGGAATGAC +
Preference number: 2 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVLTDVR*VRGGND
Trigger: GTCATTCCCACCTCTAACCCATCTAACATCGGTGAG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCAGCACTGCCAGTTTaGAACCCAGTGGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLAALPV*NPVGTG
Trigger: TCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGACGTTGCCCCAGCATaGCAGCACTGCCAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLDVAPA*QHCQFG
Trigger: TCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATACACAGCATGATGAGTaGAGTCTGTCCAGGACGTTC +
Preference number: 2 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNTQHDE*SLSRTF
Trigger: GAACGTCCTGGACAGACTCCACTCATCATGCTGTGT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTGGGCTCTGCTGGCGTaGGGCTGCATCCTACACAAT +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFWALLA*GCILHN
Trigger: ATTGTGTAGGATGCAGCCCCACGCCAGCAGAGCCCA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCA +
Preference number: 2 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPREDTE*RCPSMA
Trigger: TGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGTTCACGCATGTGTGTaGTGCCTACAATTAATTACA +
Preference number: 2 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPVHACV*CLQLIT
Trigger: TGTAATTAATTGTAGGCATCACACACATGCGTGAAC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTCACAGGGCCATGCATaGCATGACCCCCACGGGTGC +
Preference number: 2 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSQGHA*HDPHGC
Trigger: GCACCCGTGGGGGTCATGCCATGCATGGCCCTGTGA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCTCACCGATGTTAGATaGGTTAGAGGTGGGAATGAC +
Preference number: 2 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLTDVR*VRGGND
Trigger: GTCATTCCCACCTCTAACCCATCTAACATCGGTGAG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTATAGCCGACAAGATTTaGCTGGTAGATCTAAAGTTA +
Preference number: 2 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPIADKI*LVDLKL
Trigger: TAACTTTAGATCTACCAGTCAAATCTTGTCGGCTAT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGTCCCTTTGACAAAGTaGCCCTGCTTCTCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFVPLTK*PCFSFR
Trigger: CCTGAAGGAGAAGCAGGGTCACTTTGTCAAAGGGAC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCTGCTGGCGTGGGGCTaGATCCTACACAATTTTTCC +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLLAWG*ILHNFS
Trigger: GGAAAAATTGTGTAGGATGCAGCCCCACGCCAGCAG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGCAGCACTGCCAGTTTaGAACCCAGTGGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSAALPV*NPVGTG
Trigger: TCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCGAGGGGTGCCCCTTaGGGTTATTACTTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: EGVILLNISHSMSLPCPQARGAP*GYYFGN
Trigger: GTTGCCAAAGTAATAACCCCAAGGGGCACCCCTCGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGAATGCTCTTTTCCTTaGATATCCATTGTATCCTCA +
Preference number: 2 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPECSFP*ISIVSS
Trigger: TGAGGATACAATGGATATCCAAGGAAAAGAGCATTC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCA +
Preference number: 2 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFREDTE*RCPSMA
Trigger: TGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGAAAGACGGCATAAATaGGATTGTTACATGTTTCTC +
Preference number: 2 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVERRHK*DCYMFL
Trigger: GAGAAACATGTAACAATCTCATTTATGCCGTCTTTC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTACACAGCATGATGAGTaGAGTCTGTCCAGGACGTTC +
Preference number: 2 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLTQHDE*SLSRTF
Trigger: GAACGTCCTGGACAGACTCCACTCATCATGCTGTGT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAATGTAGGAGCCTCATaGGAACAGGGACCACATCTG +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFNVGAS*EQGPHL
Trigger: CAGATGTGGTCCCTGTTCCCATGAGGCTCCTACATT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CAA 90 bp ATTAATGCTTCTGTAACAGAGGCACAGAGCAATAGCCGACAAGATTaGACTGGTAGATCTAAAGTTATTGCTGGGCTCTGCTGGCGTGGG +
Preference number: 2 (lower is better)
Translates to: INASVTEAQSNSRQD*TGRSKVIAGLCWRG
Trigger: CCCACGCCAGCAGAGCCCAGCAATAACTTTAGATCTACCAGTCAAATCTTGTCGGCTATTGCTCTGTGCCTCTGTTACAGAAGCATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAGGCCGAGAAGACACTaGATGACGTTGCCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: GGIFLITEASVKYLPFPLRPRRH*MTLPQH
Trigger: ATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACATACATGCGAGGGGTaGCCCTTGGGGTTATTACTT +
Preference number: 2 (lower is better)
Translates to: EGVILLNISHSMSLPCPQHTCEG*PLGLLL
Trigger: AAGTAATAACCCCAAGGGGCACCCCTCGCATGTATG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTGCTGGCGTGGGGCTaGATCCTACACAATTTTTCC +
Preference number: 2 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLLAWG*ILHNFS
Trigger: GGAAAAATTGTGTAGGATGCAGCCCCACGCCAGCAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATCAGGAGGTGAGCATCTaGGAAGAGCTGACAAATTTG +
Preference number: 2 (lower is better)
Translates to: SRSPHERRVSASTKSVGHQEVSI*EELTNL
Trigger: CAAATTTGTCAGCTCTTCCCAGATGCTCACCTCCTG...ATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
3UTR-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCAGCACTGCCAGTTTaGAACCCAGTGGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWAALPV*NPVGTG
Trigger: TCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACT +
Preference number: 2 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLQCSRL*YATEVT
Trigger: AGTGACTTCCGTTGCATACCAAAGCCGACTACACTG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAGCATCTGGGAAGAGCTaGCAAATTTGGATCCGATTC +
Preference number: 2 (lower is better)
Translates to: RSPHERRVSASTKSVGHSASGKS*QIWIRF
Trigger: GAATCGGATCCAAATTTGTCAGCTCTTCCCAGATGC...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
3UTR-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAGGCCGAGAAGACACTaGATGACGTTGCCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWRPRRH*MTLPQH
Trigger: ATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGCACGTGTAAGCTATTaGTGTAAGCAGCCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTARVSY*CKQPGG
Trigger: ACCTCCAGGCTGCTTACATCAATAGCTTACACGTGC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCTGGACCATTTTTGGTaGAAAGAGATCCAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNLDHFW*KEIQGF
Trigger: AAAGCCCTGGATCTCTTTGCACCAAAAATGGTCCAG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCATCACGGTGGTTCTCTaGTGGGTAAGAAGCCATGGT +
Preference number: 2 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSITVVL*WVRSHG
Trigger: ACCATGGCTTCTTACCCAGCAGAGAACCACCGTGAT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTGCATGCCTGACAGGTaGAAAGACTTGGAATTTATC +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFCMPDR*KDLEFI
Trigger: GATAAATTCCAAGTCTTTTCACCTGTCAGGCATGCA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGAACCAGAAGAGCCTTaGGACCTAACTCTGGATGTT +
Preference number: 2 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSEPEEP*DLTLDV
Trigger: AACATCCAGAGTTAGGTCTCAAGGCTCTTCTGGTTC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGT +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSSVAS*ICSVKC
Trigger: ACATTTGACCGAGCATATGCAACTCGCTACTGAAGA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACT +
Preference number: 2 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSQCSRL*YATEVT
Trigger: AGTGACTTCCGTTGCATACCAAAGCCGACTACACTG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTCTTACAGTTTTCAGTaGCCAGCTTCATTTTGCCTG +
Preference number: 2 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNSYSFQ*PASFCL
Trigger: CAGGCAAAATGAAGCTGGCCACTGAAAACTGTAAGA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATACAGAGCGCCTGTCTaGATTGCTTTATTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTYRAPV*IALFCR
Trigger: CCTGCAGAATAAAGCAATCCAGACAGGCGCTCTGTA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGTAGCGAGTTGCATATaGTCGGTCAAATGTAACACA +
Preference number: 2 (lower is better)
Translates to: EGVILLNISHSMSLPCPQVASCI*SVKCNT
Trigger: TGTGTTACATTTGACCGAGCATATGCAACTCGCTAC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGT +
Preference number: 2 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSSVAS*ICSVKC
Trigger: ACATTTGACCGAGCATATGCAACTCGCTACTGAAGA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTTGGGGTTATTACTTTaGCAACCCACATGCAAAACT +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLGLLL*QPTCKT
Trigger: AGTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACCCAACAAAACTCTCTaGAAGTTGTCTACTGTGGTT +
Preference number: 2 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTPNKTL*KLSTVV
Trigger: AACCACAGTAGACAACTTTCAGAGAGTTTTGTTGGG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGCAACAAGTTCACATaGACACATCTAACACTTGAC +
Preference number: 2 (lower is better)
Translates to: EGVILLNISHSMSLPCPQCNKFT*THLTLD
Trigger: GTCAAGTGTTAGATGTGTGCATGTGAACTTGTTGCA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACT +
Preference number: 2 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTQCSRL*YATEVT
Trigger: AGTGACTTCCGTTGCATACCAAAGCCGACTACACTG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGCTTTATTCTGCAGGTaGATACAAAGTGTATCATGT +
Preference number: 2 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFALFCR*IQSVSC
Trigger: ACATGATACACTTTGTATCCACCTGCAGAATAAAGC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGTTCACGCATGTGTGTaGTGCCTACAATTAATTACA +
Preference number: 2 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTVHACV*CLQLIT
Trigger: TGTAATTAATTGTAGGCATCACACACATGCGTGAAC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTGCAACAAGTTCACATaGACACATCTAACACTTGAC +
Preference number: 2 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSCNKFT*THLTLD
Trigger: GTCAAGTGTTAGATGTGTGCATGTGAACTTGTTGCA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGGATTGCTTTATTCTaGAGGTGGATACAAAGTGTA +
Preference number: 2 (lower is better)
Translates to: EGVILLNISHSMSLPCPQWIALF*RWIQSV
Trigger: TACACTTTGTATCCACCTGCAGAATAAAGCAATCCA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGAAAGTTGTCTACTGTaGTTAGCCACAGAAACCTTT +
Preference number: 2 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTESCLL*LATETF
Trigger: AAAGGTTTCTGTGGCTAACCACAGTAGACAACTTTC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTGCATGCCTGACAGGTaGAAAGACTTGGAATTTATC +
Preference number: 2 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGCMPDR*KDLEFI
Trigger: GATAAATTCCAAGTCTTTTCACCTGTCAGGCATGCA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGT +
Preference number: 2 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSSVAS*ICSVKC
Trigger: ACATTTGACCGAGCATATGCAACTCGCTACTGAAGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAGTATTGCTACACGTTaGAAGTTCTGCCATCCTCTT +
Preference number: 2 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSIATR*KFCHPL
Trigger: AAGAGGATGGCAGAACTTCCAACGTGTAGCAATACT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTCTTACAGTTTTCAGTaGCCAGCTTCATTTTGCCTG +
Preference number: 2 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGSYSFQ*PASFCL
Trigger: CAGGCAAAATGAAGCTGGCCACTGAAAACTGTAAGA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGAAAGTTGTCTACTGTaGTTAGCCACAGAAACCTTT +
Preference number: 2 (lower is better)
Translates to: GGIFLITEASVKYLPFPLESCLL*LATETF
Trigger: AAAGGTTTCTGTGGCTAACCACAGTAGACAACTTTC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTTTTTCTTCCCTTCTTTaGTACCTATGTTGTAAGAGG +
Preference number: 2 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFFSSLL*YLCCKR
Trigger: CCTCTTACAACATAGGTACCAAAGAAGGGAAGAAAA...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTGATTACAGAGAATTaGTTGAAGCTCACAGTTTTG +
Preference number: 2 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLITEN*LKLTVL
Trigger: CAAAACTGTGAGCTTCAACCAATTCTCTGTAATCAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCCTAATTATAGGTTATaGAGAATTAGAGCTCTCACT +
Preference number: 2 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSPNYRL*RIRALT
Trigger: AGTGAGAGCTCTAATTCTCCATAACCTATAATTAGG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAAACAAAGAAATATCCTaGGTCATGATAGGTATCCAA +
Preference number: 2 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTNKEIS*VMIGIQ
Trigger: TTGGATACCTATCATGACCCAGGATATTTCTTTGTT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CAA 90 bp TTTTCTCTTTGGTTGATTACAGAGAATTGGTTGAAGCTCACAGTTTaGATGCCAACTTCCAAAGAGATAATACTTACCTCCAGCTTCACA +
Preference number: 2 (lower is better)
Translates to: FSLWLITENWLKLTV*MPTSKEIILTSSFT
Trigger: TGTGAAGCTGGAGGTAAGTATTATCTCTTTGGAAGTTGGCATCAAAACTGTGAGCTTCAACCAATTCTCTGTAATCAACCAAAGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR GCA 90 bp CTCGCATGTTCCAGCATACTGGTAGACCTATTTATTGTAACCAACGATATTCCAAAGTTGAAAACAGAATaGCATGGAGAAAGGGAAATT +
Preference number: 2 (lower is better)
Translates to: LACSSILVDLFIVTNDIPKLKTE*HGEREI
Trigger: AATTTCCCTTTCTCCATGGCATTCTGTTTTCAACTT...TGGAATATCGTTGGTTACAATAAATAGGTCTACCAGTATGCTGGAACATGCGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR-3UTR CCA 90 bp CTCGCATGTTCCAGCATACTGGTAGACCTATTTATTGTAACCAACGATATTCCAGAGAAATGGAAGTTCTaGCCTTTGTTTTTCTCATAT +
Preference number: 2 (lower is better)
Translates to: LACSSILVDLFIVTNDIPEKWKF*PLFFSY
Trigger: ATATGAGAAAAACAAAGGCCAGAACTTCCATTTCTC...TGGAATATCGTTGGTTACAATAAATAGGTCTACCAGTATGCTGGAACATGCGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR-3UTR CCA 90 bp CTCGCATGTTCCAGCATACTGGTAGACCTATTTATTGTAACCAACGATATTCCATATCTCTTTGAGAAATaGAAGTTCTGGCCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LACSSILVDLFIVTNDIPYLFEK*KFWPLF
Trigger: AAACAAAGGCCAGAACTTCCATTTCTCAAAGAGATA...TGGAATATCGTTGGTTACAATAAATAGGTCTACCAGTATGCTGGAACATGCGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGGCAGCACTGCCAGTTaGGAACCCAGTGGGGACAGG +
Preference number: 3 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPGSTAS*EPSGDR
Trigger: CCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGCC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 72 bp AAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATaGCAGCACTGCCAGTTTGGAACCCAGTGGGGACAG +
Preference number: 3 (lower is better)
Translates to: KAEKTLNDVAPA*QHCQFGTQWGQ
Trigger: CTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR TCA 72 bp CCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCTCTaGACGCTCTCTTCACTCATTTCACCCGGTCATTGG +
Preference number: 3 (lower is better)
Translates to: PAVAHRAFGCPL*TLSSLISPGHW
Trigger: CCAATGACCGGGTGAAATGAGTGAAGAGAGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCACGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 72 bp TTCCCATCTTGCTCAGCAAGGGACAAAGTCCTGCCGTaGCCCACAGAGCTTTTGGCTGTCCTCTCTGAACGC +
Preference number: 3 (lower is better)
Translates to: FPSCSARDKVLP*PTELLAVLSER
Trigger: GCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAAGATGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCATTTCACCCGGTCATaGGCTTCCTTGCTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPHFTRS*ASLLSL
Trigger: AAGGGACAGCAAGGAAGCCAATGACCGGGTGAAATG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR TCA 72 bp CTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCAGCACTGCCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: LSKPFEGREDTE*RCPSMAALPVW
Trigger: CCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGCAGCACTGCCAGTTaGGAACCCAGTGGGGACAGG +
Preference number: 3 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGSTAS*EPSGDR
Trigger: CCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGCC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR TCA 72 bp CCGGTCATTGGCTTCCTTGCTGTCCCTTTGACAAAGTaGCCCTGCTTCTCCTTCAGGGTCTCTGCATGTGTT +
Preference number: 3 (lower is better)
Translates to: PVIGFLAVPLTK*PCFSFRVSACV
Trigger: AACACATGCAGAGACCCTGAAGGAGAAGCAGGGTCACTTTGTCAAAGGGACAGCAAGGAAGCCAATGACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR TCA 72 bp CATTTCACCCGGTCATTGGCTTCCTTGCTGTCCCTTTaGCAAAGTGACCCTGCTTCTCCTTCAGGGTCTCTG +
Preference number: 3 (lower is better)
Translates to: HFTRSLASLLSL*QSDPASPSGSL
Trigger: CAGAGACCCTGAAGGAGAAGCAGGGTCACTTTGTCAAAGGGACAGCAAGGAAGCCAATGACCGGGTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGTAGATCTAAAGTTATaGCTGGGCTCTGCTGGCGTG +
Preference number: 3 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNVDLKL*LGSAGV
Trigger: CACGCCAGCAGAGCCCAGCAATAACTTTAGATCTAC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGGCAGCACTGCCAGTTaGGAACCCAGTGGGGACAGG +
Preference number: 3 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQGSTAS*EPSGDR
Trigger: CCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGCC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGTTGATTACAGAGAATaGGTTGAAGCTCACAGTTTT +
Preference number: 3 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPVDYRE*VEAHSF
Trigger: AAAACTGTGAGCTTCAACCAATTCTCTGTAATCAAC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTATCTACCCTTTCCTTaGGTACTTCTACTTCTTTGT +
Preference number: 3 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPYLPFP*VLLLLC
Trigger: ACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGATA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 72 bp TTGACTGGTAGATCTAAAGTTATTGCTGGGCTCTGCTaGCGTGGGGCTGCATCCTACACAATTTTTCCCATC +
Preference number: 3 (lower is better)
Translates to: LTGRSKVIAGLC*RGAASYTIFPI
Trigger: GATGGGAAAAATTGTGTAGGATGCAGCCCCACGCCAGCAGAGCCCAGCAATAACTTTAGATCTACCAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAGAAGAGCTGACAAATTaGGATCCGATTCCCCGGAGG +
Preference number: 3 (lower is better)
Translates to: RSPHERRVSASTKSVGHSEELTN*DPIPRR
Trigger: CCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTC...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477712.2
3UTR-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGTAGATCTAAAGTTATaGCTGGGCTCTGCTGGCGTG +
Preference number: 3 (lower is better)
Translates to: EGVILLNISHSMSLPCPQVDLKL*LGSAGV
Trigger: CACGCCAGCAGAGCCCAGCAATAACTTTAGATCTAC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGGTACTTCTACTTCTTaGTATCCCTGGGGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFGTSTS*YPWGRQ
Trigger: TTGCCTTCCCCAGGGATACAAAGAAGTAGAAGTACC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR GCA 72 bp GCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATaGTCGGTCAAATGTAACACATTTGTGCCACACAGC +
Preference number: 3 (lower is better)
Translates to: ATEVTSSVASCI*SVKCNTFVPHS
Trigger: GCTGTGTGGCACAAATGTGTTACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTTCTTCAGTAGCGAGTaGCATATGCTCGGTCAAATG +
Preference number: 3 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNFFSSE*HMLGQM
Trigger: CATTTGACCGAGCATATGCAACTCGCTACTGAAGAA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTATCTACCCTTTCCTTaGGTACTTCTACTTCTTTGT +
Preference number: 3 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNYLPFP*VLLLLC
Trigger: ACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGATA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CCA 72 bp TCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACTTCTTCAGTAGCGAGT +
Preference number: 3 (lower is better)
Translates to: SRKEGTVQCSRL*YATEVTSSVAS
Trigger: ACTCGCTACTGAAGAAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGTCTGTCCAAGCCTTTaGAAGGCCGAGAAGACACTG +
Preference number: 3 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQVCPSL*KAEKTL
Trigger: CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGAC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTTGAAGCTCACAGTTTaGATGCCAACTTCCAAAGAG +
Preference number: 3 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLKLTV*MPTSKE
Trigger: CTCTTTGGAAGTTGGCATCAAAACTGTGAGCTTCAA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGGTACTTCTACTTCTTaGTATCCCTGGGGAAGGCAA +
Preference number: 3 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTGTSTS*YPWGRQ
Trigger: TTGCCTTCCCCAGGGATACAAAGAAGTAGAAGTACC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCTCACTGTATCCGTTTaGTTCTTCATGGCACTAATC +
Preference number: 3 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLTVSV*FFMALI
Trigger: GATTAGTGCCATGAAGAACAAAACGGATACAGTGAG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR GCA 72 bp TGGTATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGTAACACATTTGTGCCA +
Preference number: 3 (lower is better)
Translates to: WYATEVTSSVAS*ICSVKCNTFVP
Trigger: TGGCACAAATGTGTTACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTCTTCAGTAGCGAGTaGCATATGCTCGGTCAAATG +
Preference number: 3 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTFFSSE*HMLGQM
Trigger: CATTTGACCGAGCATATGCAACTCGCTACTGAAGAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTCTTCAGTAGCGAGTaGCATATGCTCGGTCAAATG +
Preference number: 3 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFFSSE*HMLGQM
Trigger: CATTTGACCGAGCATATGCAACTCGCTACTGAAGAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTTGGGGTTATTACTTaGGCAACCCACATGCAAAAC +
Preference number: 3 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLGVIT*ATHMQN
Trigger: GTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCATGGACACGAATTTTTaGTTGTTAAGGCAGGCATCA +
Preference number: 3 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFMDTNF*LLRQAS
Trigger: TGATGCCTGCCTTAACAACAAAAAATTCGTGTCCAT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR TCA 72 bp TCTGTTCTTTCTACTGTGGCTCCCAACAAAACTCTCTaGAAGTTGTCTACTGTGGTTAGCCACAGAAACCTT +
Preference number: 3 (lower is better)
Translates to: SVLSTVAPNKTL*KLSTVVSHRNL
Trigger: AAGGTTTCTGTGGCTAACCACAGTAGACAACTTTCAGAGAGTTTTGTTGGGAGCCACAGTAGAAAGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR GCA 72 bp CTAAGTTACAGAGCGCCTGTCTGGATTGCTTTATTCTaGAGGTGGATACAAAGTGTATCATGTTTCAGTGCT +
Preference number: 3 (lower is better)
Translates to: LSYRAPVWIALF*RWIQSVSCFSA
Trigger: AGCACTGAAACATGATACACTTTGTATCCACCTGCAGAATAAAGCAATCCAGACAGGCGCTCTGTAACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTGGTTCTTATAGTATaGCTACACGTTGGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLVLIV*LHVGSS
Trigger: AGAACTTCCAACGTGTAGCAATACTATAAGAACCAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTGAAGCTCACAGTTTaGATGCCAACTTCCAAAGAG +
Preference number: 3 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLKLTV*MPTSKE
Trigger: CTCTTTGGAAGTTGGCATCAAAACTGTGAGCTTCAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGTTGATTACAGAGAATaGGTTGAAGCTCACAGTTTT +
Preference number: 3 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFVDYRE*VEAHSF
Trigger: AAAACTGTGAGCTTCAACCAATTCTCTGTAATCAAC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTCACTGTATCCGTTTaGTTCTTCATGGCACTAATC +
Preference number: 3 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLTVSV*FFMALI
Trigger: GATTAGTGCCATGAAGAACAAAACGGATACAGTGAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAAATAGCCGACAAGATTaGACTGGTAGATCTAAAGTT +
Preference number: 3 (lower is better)
Translates to: EGVILLNISHSMSLPCPQNSRQD*TGRSKV
Trigger: AACTTTAGATCTACCAGTCAAATCTTGTCGGCTATT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTGGTTCTTATAGTATaGCTACACGTTGGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLVLIV*LHVGSS
Trigger: AGAACTTCCAACGTGTAGCAATACTATAAGAACCAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTACAGGCTGTCAGCTTTaGACCATCTTACAGTTTTCA +
Preference number: 3 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGTGCQL*TILQFS
Trigger: TGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR-3UTR CAA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTTGGAAGTTCTGGCCTTaGTTTTTCTCATATTGTTCT +
Preference number: 3 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFWKFWP*FFSYCS
Trigger: AGAACAATATGAGAAAAACAAAGGCCAGAACTTCCA...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR-3UTR CAA 90 bp GGTAAGTTTCCACATCCTCTAATTACCATTGTCCAAGTACTGAACCTAAAAGAACAAACACAGTCACCTTaGCTCATCCAGGCTTTATCT +
Preference number: 3 (lower is better)
Translates to: GKFPHPLITIVQVLNLKEQTQSP*LIQALS
Trigger: AGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTG...TTCTTTTAGGTTCAGTACTTGGACAATGGTAATTAGAGGATGTGGAAACTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATTGGTTCTTATAGTATaGCTACACGTTGGAAGTTCT +
Preference number: 3 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLVLIV*LHVGSS
Trigger: AGAACTTCCAACGTGTAGCAATACTATAAGAACCAA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
3UTR TCA 72 bp CTCTTCTATAGAATACTCCTAGAATATTACTGCCAATaGTTCAGTAGCCATATGCTAGTAAAGCAAGCTATA +
Preference number: 3 (lower is better)
Translates to: LFYRILLEYYCQ*FSSHMLVKQAI
Trigger: TATAGCTTGCTTTACTAGCATATGGCTACTGAATCATTGGCAGTAATATTCTAGGAGTATTCTATAGAAGAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACGTCCTCTGGGCTGCTaGGGCTCGACCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGRPLGC*GSTPGG
Trigger: TCCTCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCTAGGCCGGCCTCCCTaGCGCGGTGCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLGRPP*RGAGSL
Trigger: GAGGCTGCCTGCACCGCGTCAGGGAGGCCGGCCTAG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGTGGCCCCCGGGGAGTaGTGGTCTCCGGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGVAPGE*WSPGDS
Trigger: ACTATCTCCCGGAGACCATCACTCCCCGGGGGCCAC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAAGATGTGCTCCGGGTaGCGGCCATGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGKMCSG*RPWPWA
Trigger: AGCCCAGGGCCATGGCCGTCACCCGGAGCACATCTT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCGTCCTCTGGGCTGCTaGGGCTCGACCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVRPLGC*GSTPGG
Trigger: TCCTCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAAGGCCAGGCATAGCTaGGGGCTGTGGGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGKARHS*GLWGSA
Trigger: AGCACTGCCCCACAGCCCTCAGCTATGCCTGGCCTT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATCACAGGCTGCGGGCTaGAAGGCGGCAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGSQAAG*KAARMA
Trigger: AGCCATCCTTGCCGCCTTTCAGCCCGCAGCCTGTGA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCTTCGTCCTCTGGGCTaGTGGGGCTCGACCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVLRPLG*WGSTPG
Trigger: TCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACGAAG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCTTCGTCCTCTGGGCTaGTGGGGCTCGACCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCLRPLG*WGSTPG
Trigger: TCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACGAAG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCGGCAGTTGCGGTGTTaGCGCTGGTGGTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPRQLRC*RWWFPG
Trigger: ACCCGGGAACCACCAGCGGCAACACCGCAACTGCCG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCTCCGTTCGGCAGTTaGGGTGTTGCCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGAPFGS*GVAAGG
Trigger: ACCACCAGCGGCAACACCGCAACTGCCGAACGGAGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACAGAGGCATGTCCCTTaGTACCACACCGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGQRHVP*YHTAGP
Trigger: GGGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACCGACTGGAGCCGAGTaGAGGCATAAGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGPTGAE*RHKARH
Trigger: ATGCCTGGCCTTATGCCTTCACTCGGCTCCAGTCGG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACAGCGTGGAGTACACTaGAGTGGGGACCTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGQRGVH*SGDLVP
Trigger: CGGAACGAGGTCCCCACTGCAGTGTACTCCACGCTG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAGGCGGCGGCCGCGCTaGTTTCATTTCGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQRRRPR*FHFGAV
Trigger: GACAGCCCCGAAATGAAAGCAGCGCGGCCGCCGCCT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCGCTGCGCCGAGCGCTaGAGCCCCGGGAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLRCAER*SPGNLV
Trigger: CACCAGGTTCCCGGGGCTCCAGCGCTCGGCGCAGCG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645780.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGGACCACGCGCCGTCTaGATAGAGAGGGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCGPRAV*IERVSC
Trigger: GCAGCTGACCCTCTCTATTCAGACGGCGCGTGGTCC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGVEPEA*CNRCQR
Trigger: CCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCAC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCCTTGCTACTGGCCGTaGAGCGGTAGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCPCYWP*SGRRAG
Trigger: ACCCGCCCTTCTACCGCTTCACGGCCAGTAGCAAGG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCCTTGCTACTGGCCGTaGAGCGGTAGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVPCYWP*SGRRAG
Trigger: ACCCGCCCTTCTACCGCTTCACGGCCAGTAGCAAGG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTCACAGGCTGCGGGCTaGAAGGCGGCAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSQAAG*KAARMA
Trigger: AGCCATCCTTGCCGCCTTTCAGCCCGCAGCCTGTGA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACTTTCTCCCTGTGCGTaGCAGAAGCAGGTGGAACCG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLSPCA*QKQVEP
Trigger: CGGTTCCACCTGCTTCTGGCACGCACAGGGAGAAAG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCCGGGAGGAGGAGCCTaGTGTCCACCAGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQPGGGA*CPPARC
Trigger: ACATCGAGCTGGTGGACAGCAGGCTCCTCCTCCCGG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCTCCGTTCGGCAGTTaGGGTGTTGCCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQAPFGS*GVAAGG
Trigger: ACCACCAGCGGCAACACCGCAACTGCCGAACGGAGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTGGAGCAGGGGCTGCTaGACACTAGGGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQWSRGC*TLGRPF
Trigger: GAAGGGCCTCCCTAGTGTGCAGCAGCCCCTGCTCCA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGAGGCATGTCCCTTaGTACCACACCGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCQRHVP*YHTAGP
Trigger: GGGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCTTGACTTCGTCCTCTaGGCTGCTGGGGCTCGACCC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCLDFVL*AAGARP
Trigger: GGGTCGAGCCCCAGCAGCCCAGAGGACGAAGTCAAG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACTCCTGGGTCATCTGTaGGAGGTTTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLLGHL*EVSTAA
Trigger: GGCAGCAGTGGAAACCTCCCACAGATGACCCAGGAG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACGTGCACCTGGCCGATaGGCTTACAGTAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGRAPGR*AYSRTE
Trigger: TTCAGTCCTACTGTAAGCTCATCGGCCAGGTGCACG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCCGACTGGAGCCGAGTaGAGGCATAAGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVPTGAE*RHKARH
Trigger: ATGCCTGGCCTTATGCCTTCACTCGGCTCCAGTCGG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGTGGCCCCCGGGGAGTaGTGGTCTCCGGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNVAPGE*WSPGDS
Trigger: ACTATCTCCCGGAGACCATCACTCCCCGGGGGCCAC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGTCAGGCACCGGGGATaGCTGGTCCTCTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVVRHRG*LVLSQE
Trigger: TTCCTGAGAGAGGACCAGTCATCCCCGGTGCCTGAC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAACCAGCATAGTGCCTTaGAGAGCTTGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGTSIVP*RACEGC
Trigger: ACAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCTAGGAGTGCTTCCTaGCAGTTGGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQARSAS*QLALLQ
Trigger: CTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGTCCTCCTCCTCGGATaGTTCATCGGAGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGVLLLG*FIGVLM
Trigger: CATGAGGACTCCGATGAATCATCCGAGGAGGAGGAC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCAGCGTGGAGTACACTaGAGTGGGGACCTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQQRGVH*SGDLVP
Trigger: CGGAACGAGGTCCCCACTGCAGTGTACTCCACGCTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACTCCCACCGATGGGGTaGCTATGGCCTTGTTATCGT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLPPMG*LWPCYR
Trigger: ACGATAACAAGGCCATAGGCACCCCATCGGTGGGAG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATGGCCAGCTTCATTTTaGCTGCCCCTTTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGWPASF*LPLSQP
Trigger: GGGCTGAGAAAGGGGCAGGCAAAATGAAGCTGGCCA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACACTCCAGCATGGACTaGATGGCTGCTTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGHSSMD*MAASVD
Trigger: GTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGTG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACGTGCCAGAAGCAGGTaGAACCGGAGGCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGRARSR*NRRLDV
Trigger: TACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAAGCCCGAATCCTGCTaGCTGGCCATGTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQKPESC*LAMSAA
Trigger: TGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGGGTTGTCACAATGCTaGACGATGGGGTTCACGGGC +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPGLSQC*TMGFTG
Trigger: GCCCGTGAACCCCATCGTCCAGCATTGTGACAACCC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATTGCACCTGTGGAGTaGCCCCCGGGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCIAPVE*PPGSDG
Trigger: ACCATCACTCCCCGGGGGCCACTCCACAGGTGCAAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCAATATTGCACCTGTaGAGTGGCCCCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCAILHL*SGPRGV
Trigger: CACTCCCCGGGGGCCACTCCACAGGTGCAATATTGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGGCACCGGGGATGACTaGTCCTCTCTCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPGTGDD*SSLRKS
Trigger: TGACTTCCTGAGAGAGGACCAGTCATCCCCGGTGCC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATGGTGGCCAGCAGGTTaGTGGGATGGTTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGWWPAG*WDGLCG
Trigger: CCCACATAAACCATCCCACCAACCTGCTGGCCACCA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCGAGGGGTGCCCCTTaGGGTTATTACTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGARGAP*GYYFGN
Trigger: GTTGCCAAAGTAATAACCCCAAGGGGCACCCCTCGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTGGGCTCTGCTGGCGTaGGGCTGCATCCTACACAAT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPWALLA*GCILHN
Trigger: ATTGTGTAGGATGCAGCCCCACGCCAGCAGAGCCCA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGACCCCACCTGAACTaGGATCGGCTTTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGRPHLN*DRLSSG
Trigger: CCCAGAAGAAAGCCGATCCCAGTTCAGGTGGGGTCT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642040.1
3UTR CAA 72 bp ACTACCCTGCCCGCAAACATTCAGTGGCTTCCCATCTaGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TTLPANIQWLPI*LSKGQSPAVAH
Trigger: GTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGGTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCAGAAGAGGGGGAGTGTaGGCTCAGGGTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCRRGGV*AQGTSW
Trigger: CCAGGATGTACCCTGAGCTCACACTCCCCCTCTTCT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGTGGCCCCCGGGGAGTaGTGGTCTCCGGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLVAPGE*WSPGDS
Trigger: ACTATCTCCCGGAGACCATCACTCCCCGGGGGCCAC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTACCAGCATAGTGCCTTaGAGAGCTTGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPTSIVP*RACEGC
Trigger: ACAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCACAGAGAAGCTTCGTTaGTGCCGGCTCCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCTEKLR*CRLRSA
Trigger: TGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGACAGAGAAGCTTCGTTaGTGCCGGCTCCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQTEKLR*CRLRSA
Trigger: TGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGTGGGATGGGTCCGTaGGACTGTCCTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCCGMGP*DCPSRR
Trigger: CCTCCTTGAAGGACAGTCTCACGGACCCATCCCACA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGGGCCATGCATGGCATaGCCCCCACGGGTGCCATTC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLGPCMA*PPRVPF
Trigger: GAATGGCACCCGTGGGGGTCATGCCATGCATGGCCC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGGTAACTCTGGGCCCTaGGGATCATGTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQGNSGP*GSCPGS
Trigger: AGATCCGGGACATGATCCGCAGGGCCCAGAGTTACC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCACTGGGTGAGCAGCTaGAGCAGCAACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCHWVSS*SSNFRD
Trigger: GTCCCTGAAGTTGCTGCTGCAGCTGCTCACCCAGTG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGGGTGAGCAGCTaGAGCAGCAACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQHWVSS*SSNFRD
Trigger: GTCCCTGAAGTTGCTGCTGCAGCTGCTCACCCAGTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATTGGGTAAGTTCTCCTaGCGGAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLGKFS*RRKLKR
Trigger: CCTCTTCAGCTTCCTCCGGCAGGAGAACTTACCCAA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAACGGGCTCTGTCTGCTaGAGCTCAAAGAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGTGSVC*SSKRSS
Trigger: AGAGCTTCTCTTTGAGCTGCAGCAGACAGAGCCCGT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCGGCAGTTGCGGTGTTaGCGCTGGTGGTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLRQLRC*RWWFPG
Trigger: ACCCGGGAACCACCAGCGGCAACACCGCAACTGCCG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGGCCCACTTCAGCTGTaGCTGGAGTTTCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGGPLQL*LEFLKL
Trigger: AAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACGTCACAGCCACCGTTaGAGCCACCGCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQRHSHR*SHRRRP
Trigger: GGGGCGGCGGCGGTGGCTGCAACGGTGGCTGTGACG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTACCGCCTGCGCTCCCTaGGCTGCGCTGCGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCTACAP*AALRSL
Trigger: CAGCGAGCGCAGCGCAGCGCAGGGAGCGCAGGCGGT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645780.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCGGAGGCTACTTCGCTaGGCCGAGCGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRRLLR*AERWSP
Trigger: GGGGCTCCAGCGCTCGGCGCAGCGAAGTAGCCTCCG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645780.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGGCATACAAAGAGGCTaGGAGGACGGGCAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLGIQRG*EDGQRP
Trigger: CGGCCGCTGCCCGTCCTCCCAGCCTCTTTGTATGCC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCCGAATCCTGCTGGCTaGCCATGTCTGCGGCATACA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCPNPAG*PCLRHT
Trigger: TGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATAAGCTGGTTGATGTaGCTGCGCCAGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCISWLM*LRQASS
Trigger: CGAGGAGGCCTGGCGCAGCCACATCAACCAGCTTAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGAGTCACACATAAGCTaGTTGATGTGGCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGESHIS*LMWLRQ
Trigger: CTGGCGCAGCCACATCAACCAGCTTATGTGTGACTC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCGGACAGTTTGCGTGTaGCCACCTGGAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPRTVCV*PPGNCR
Trigger: TCTGCAGTTTCCAGGTGGCCACACGCAAACTGTCCG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCTGTGGGGCAGTGCTTaGGTAAGTTCTCCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLWGSA*VSSPAG
Trigger: TCCGGCAGGAGAACTTACCCAAGCACTGCCCCACAG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCACGCTGTAGAGGGGTaGCAGCGGGCCGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLHAVEG*QRAVCS
Trigger: GGAACACACGGCCCGCTGCCACCCCTCTACAGCGTG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCTCAGGGTACATCCTaGCCAGCTCACATGACAAGA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGAQGTS*PAHMTR
Trigger: TCTTGTCATGTGAGCTGGCCAGGATGTACCCTGAGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCTCCTGGGTCATCTGTaGGAGGTTTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVLLGHL*EVSTAA
Trigger: GGCAGCAGTGGAAACCTCCCACAGATGACCCAGGAG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTTGCGGTGTTGCCGCTaGTGGTTCCCGGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVLRCCR*WFPGSC
Trigger: ACATGAACCCGGGAACCACCAGCGGCAACACCGCAA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGAATTCTGTCCAGTGTaGCACTTCGAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGEFCPV*HFEVGQ
Trigger: CTGACCCACCTCGAAGTGCCACACTGGACAGAATTC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGACGTTGCCCCAGCATaGCAGCACTGCCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVDVAPA*QHCQFG
Trigger: TCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCGTGCACCTGGCCGATaGGCTTACAGTAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCRAPGR*AYSRTE
Trigger: TTCAGTCCTACTGTAAGCTCATCGGCCAGGTGCACG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGACTTCTGCACTCCCTaGTCTGCCGCAAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQDFCTP*SAAKLC
Trigger: GCAAAGCTTTGCGGCAGATCAGGGAGTGCAGAAGTC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATTCGGGTGCCTCAGGTaGATGGGATCCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGFGCLR*MGSKFL
Trigger: TAAGAACTTGGATCCCATTCACCTGAGGCACCCGAA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGTCTGGGTCCACATTaGTGGGTAGCATGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCCLGPH*WVAWLA
Trigger: CGCCAACCATGCTACCCATCAATGTGGACCCAGACA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCACCAGCATAGTGCCTTaGAGAGCTTGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCTSIVP*RACEGC
Trigger: ACAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGTCCTCCTCCTCGGATaGTTCATCGGAGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQVLLLG*FIGVLM
Trigger: CATGAGGACTCCGATGAATCATCCGAGGAGGAGGAC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGTCCTCCTCCTCGGATaGTTCATCGGAGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVVLLLG*FIGVLM
Trigger: CATGAGGACTCCGATGAATCATCCGAGGAGGAGGAC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCTGGTGTTAAAGGAATaGGGTTCTGCAGGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPLVLKE*GSAGVE
Trigger: CTCGACCCCTGCAGAACCTCATTCCTTTAACACCAG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQREDTE*RCPSMA
Trigger: TGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCTGCACTCCCTGATCTaGCGCAAAGCTTTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCLHSLI*RKALPS
Trigger: ACTCGGCAAAGCTTTGCGGCAGATCAGGGAGTGCAG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGCTCCATCAGCTTGGTaGAGATCTCGGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVAPSAW*RSRSGS
Trigger: AGAGCCTGACCGAGATCTGCACCAAGCTGATGGAGC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGGTCCAGTGCCCGATTaGCTTTTTCTTCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCGPVPD*LFLPPQ
Trigger: CTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACATTCCACCAACCACTaGAGATCCACATTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGHSTNH*RSTLWV
Trigger: CACCCACAATGTGGATCTGCAGTGGTTGGTGGAATG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCTATTGACCAGGACTaGGTTCCATTCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGAIDQD*VPFHQP
Trigger: TGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACTTCGTCCTCTGGGCTaGTGGGGCTCGACCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLRPLG*WGSTPG
Trigger: TCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACGAAG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACCAAAGTGGACCAAATaGCCTGGTCGTGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGPKWTK*PGREKL
Trigger: GAGTTTCTCACGACCAGGGCATTTGGTCCACTTTGG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACTTGCGAGGGCTGTCTaGAATGCAACTTCACTCAAC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLARAV*NATSLN
Trigger: GTTGAGTGAAGTTGCATTGCAGACAGCCCTCGCAAG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCATCCATGTTCTCCTaGTCTCGGGCACCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSSMFS*SRAPSS
Trigger: TGAGGACGGTGCCCGAGAGCAGGAGAACATGGATGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCCTCCCTGACGCGGTaGAGGCAGCCTCCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFASLTR*RQPPAH
Trigger: GTGGGCCGGAGGCTGCCTGCACCGCGTCAGGGAGGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTCCAGCATGGACTaGATGGCTGCTTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQHSSMD*MAASVD
Trigger: GTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTCAGCTCCATCAGCTTaGTGCAGATCTCGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSAPSA*CRSRSG
Trigger: GCCTGACCGAGATCTGCACCAAGCTGATGGAGCTGA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCGTGCCAGAAGCAGGTaGAACCGGAGGCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCRARSR*NRRLDV
Trigger: TACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCATCCTCATGCACGGTaGTGTCCTCCTCCTCACGAA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCHPHAR*CPPPHE
Trigger: TTCGTGAGGAGGAGGACACCACCGTGCATGAGGATG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCAGAGGCATGTCCCTTaGTACCACACCGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLQRHVP*YHTAGP
Trigger: GGGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCGGACAGTTTGCGTGTaGCCACCTGGAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCRTVCV*PPGNCR
Trigger: TCTGCAGTTTCCAGGTGGCCACACGCAAACTGTCCG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCGTTGGGGTGTGTTGTaGGGAATCGCTGGCTTACCT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVRWGVL*GIAGLP
Trigger: AGGTAAGCCAGCGATTCCCCACAACACACCCCAACG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTGTGGCACTTCGAGGTaGGTCAGAGGATCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQCGTSR*VRGSVD
Trigger: ATCGACCGATCCTCTGACCCACCTCGAAGTGCCACA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGGTGGCCAGCAGGTTaGTGGGATGGTTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCWWPAG*WDGLCG
Trigger: CCCACATAAACCATCCCACCAACCTGCTGGCCACCA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGGAAACCCAATAGCGTaGGATGCATCCACCATGGAT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGGNPIA*DASTMD
Trigger: ATCCATGGTGGATGCATCCCACGCTATTGGGTTTCC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCTGGAACAAGGACGTTaGAGTTGGAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPLEQGR*SWSLRK
Trigger: CTTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGTCCAGAAGTCCACATaGAAGGAGAGTCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQVQKST*KESLGI
Trigger: GATGCCGAGACTCTCCTTTCATGTGGACTTCTGGAC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGTCCAGAAGTCCACATaGAAGGAGAGTCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCVQKST*KESLGI
Trigger: GATGCCGAGACTCTCCTTTCATGTGGACTTCTGGAC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGGACCCAGGGGTCTTTaGCAGACTGTGCAAATATCC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCGPRGL*QTVQIS
Trigger: GGATATTTGCACAGTCTGTCAAAGACCCCTGGGTCC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCAGGAACTGCAAGGTaGTCCTCAGGTTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSGTAR*SSGCCS
Trigger: GGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGCTCTTCCATGGTTTaGATGGTGTTGTTACGGCAC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGSSSMV*MVLLRH
Trigger: GTGCCGTAACAACACCATTCAAACCATGGAAGAGCT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGTGGCCCCCGGGGAGTaGTGGTCTCCGGGAGATAGT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPVAPGE*WSPGDS
Trigger: ACTATCTCCCGGAGACCATCACTCCCCGGGGGCCAC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCAGAGGATCGGTCGATaGCACCAAACTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQQRIGR*HQTSWA
Trigger: TGCCCAAGAAGTTTGGTGTCATCGACCGATCCTCTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAAGATGTGCTCCGGGTaGCGGCCATGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNKMCSG*RPWPWA
Trigger: AGCCCAGGGCCATGGCCGTCACCCGGAGCACATCTT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAAGATGTGCTCCGGGTaGCGGCCATGGCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLKMCSG*RPWPWA
Trigger: AGCCCAGGGCCATGGCCGTCACCCGGAGCACATCTT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCTGGTGTTAAAGGAATaGGGTTCTGCAGGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLVLKE*GSAGVE
Trigger: CTCGACCCCTGCAGAACCTCATTCCTTTAACACCAG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGGCGGCAAGGATGGCTaGGAAGAAGGGCGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFGGKDG*EEGRGR
Trigger: CCTCCCTCGCCCTTCTTCTCAGCCATCCTTGCCGCC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGGGTCTTCTCCACGTTaGAGAGATTTTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGGSSPR*RDFVNG
Trigger: GCCATTGACAAAATCTCTGCAACGTGGAGAAGACCC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTCGTCATCCTCAGGCTaGCCCAGGGCAATAAACAAC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSSSSG*PRAINN
Trigger: GTTGTTTATTGCCCTGGGGCAGCCTGAGGATGACGA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTTGGGTAAGTTCTCCTaGCGGAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVLGKFS*RRKLKR
Trigger: CCTCTTCAGCTTCCTCCGGCAGGAGAACTTACCCAA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCATAGTTGTCTCCGCTaGCGGCAGTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCHSCLR*RQCWFS
Trigger: AGAAAACCAGCACTGCCGGCAGCGGAGACAACTATG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGTGCTGACAGAGGTTaGTTGAGGGCCCGGAATATC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCCADRG*LRARNI
Trigger: GATATTCCGGGCCCTCAAGCAACCTCTGTCAGCACA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGGCCCACTTCAGCTGTaGCTGGAGTTTCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCGPLQL*LEFLKL
Trigger: AAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCGCCCAGAAGAATTCTaGAGCTCATCATACCGCCTC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQRPEEF*SSSYRL
Trigger: GAGGCGGTATGATGAGCTGCAGAATTCTTCTGGGCG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGCTTCATTTTGCCTaGCCCTTTCTCAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCQLHFA*PFLSPR
Trigger: TCGTGGGCTGAGAAAGGGGCAGGCAAAATGAAGCTG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCATACATGCGAGGGGTaGCCCTTGGGGTTATTACTT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPHTCEG*PLGLLL
Trigger: AAGTAATAACCCCAAGGGGCACCCCTCGCATGTATG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTATCACGGTGGTTCTCTaGTGGGTAAGAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPITVVL*WVRSHG
Trigger: ACCATGGCTTCTTACCCAGCAGAGAACCACCGTGAT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCTGCTGGCGTGGGGCTaGATCCTACACAATTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCLLAWG*ILHNFS
Trigger: GGAAAAATTGTGTAGGATGCAGCCCCACGCCAGCAG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGCGCCTGTCTGGATTaGTTTATTCTGCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGSACLD*FILQVD
Trigger: ATCCACCTGCAGAATAAAGCAATCCAGACAGGCGCT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGGCTGCCTCGCCAGGGTAAACTaGTCCAGTGCCCGATTGCCT +
Preference number: 4 (lower is better)
Translates to: ADKFGSDSPEVISKVTGCLARVN*SSARLP
Trigger: AGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAG...GCAGCCAGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATATAAGCTGGTTGATGTaGCTGCGCCAGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNISWLM*LRQASS
Trigger: CGAGGAGGCCTGGCGCAGCCACATCAACCAGCTTAT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGAGTCACACATAAGCTaGTTGATGTGGCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCESHIS*LMWLRQ
Trigger: CTGGCGCAGCCACATCAACCAGCTTATGTGTGACTC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACAAGCCAAGAGAGTGTaGCCTCTTTCCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGQAKRV*PLSCCC
Trigger: ACAACAACAGGAAAGAGGCCACACTCTCTTGGCTTG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATTCTTCGGAGTCCCCTaGTTGACAGGTAATTACTCC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGFFGVP*LTGNYS
Trigger: GGAGTAATTACCTGTCAACCAGGGGACTCCGAAGAA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATGACTAGTTTCCACTaGGTGAGCAGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQMTSFH*VSSCSS
Trigger: GCTGCTGCAGCTGCTCACCCAGTGGAAACTAGTCAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATGACTAGTTTCCACTaGGTGAGCAGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCMTSFH*VSSCSS
Trigger: GCTGCTGCAGCTGCTCACCCAGTGGAAACTAGTCAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTTGCGTGTGGCCACCTaGAAACTGCAGAGTAAAACC +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPLRVAT*KLQSKT
Trigger: GGTTTTACTCTGCAGTTTCCAGGTGGCCACACGCAA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACGTCCTCTGGGCTGCTaGGGCTCGACCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTRPLGC*GSTPGG
Trigger: TCCTCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCGTCCTCTGGGCTGCTaGGGCTCGACCCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFRPLGC*GSTPGG
Trigger: TCCTCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGCAATATTGCACCTGTaGAGTGGCCCCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLAILHL*SGPRGV
Trigger: CACTCCCCGGGGGCCACTCCACAGGTGCAATATTGC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGCAACTTCACTCAACTaGTGCTCCAGATGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPATSLN*CSRWKP
Trigger: AGGCTTCCATCTGGAGCACCAGTTGAGTGAAGTTGC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGTGGGATGGTTTATGTaGGATGGGTCCGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQVGWFM*DGSVRL
Trigger: CAGTCTCACGGACCCATCCCACATAAACCATCCCAC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGGCCAGCAGGTTGGTaGGATGGTTTATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCWPAGW*DGLCGM
Trigger: CATCCCACATAAACCATCCCACCAACCTGCTGGCCA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTGGCCAGCAGGTTGGTaGGATGGTTTATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQWPAGW*DGLCGM
Trigger: CATCCCACATAAACCATCCCACCAACCTGCTGGCCA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAAGGACGTTGGAGTTaGAGCCTGAGGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCQGRWS*SLRKWK
Trigger: CTTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCAAGGACGTTGGAGTTaGAGCCTGAGGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQQGRWS*SLRKWK
Trigger: CTTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGAAAGGCGGCAAGGATaGCTGAGAAGAAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNERRQG*LRRRAR
Trigger: CCTCGCCCTTCTTCTCAGCCATCCTTGCCGCCTTTC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGACGTTGCCCCAGCATaGCAGCACTGCCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNDVAPA*QHCQFG
Trigger: TCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCCCGCAAACATTCAGTaGCTTCCCATCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVPANIQ*LPILLS
Trigger: GCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGCTGGAAATATGGATaGTCTCTTCTTCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGSWKYG*SLLRVP
Trigger: AGGCACCCGAAGAAGAGACCATCCATATTTCCAGCT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
3UTR CAA 72 bp GCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTaGGCTGTCCTCTCTGAACGCTCTCTTCACTCATTT +
Preference number: 4 (lower is better)
Translates to: ARDKVLPWPTEL*AVLSERSLHSF
Trigger: AAATGAGTGAAGAGAGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGCACGTGTAAGCTATTaGTGTAAGCAGCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVARVSY*CKQPGG
Trigger: ACCTCCAGGCTGCTTACATCAATAGCTTACACGTGC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCACGTGTAAGCTATTaGTGTAAGCAGCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCARVSY*CKQPGG
Trigger: ACCTCCAGGCTGCTTACATCAATAGCTTACACGTGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAATCTTGCGTTCAGCCTaGGTGGTGAAGTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGILRSA*VVKLTN
Trigger: ATTTGTCAACTTCACCACTCAGGCTGAACGCAAGAT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAGCAGGTACCGGGCGTaGTGCGCCTGTCACAGGTTG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLSRYRA*CACHRL
Trigger: CAACCTGTGACAGGCGCATCACGCCCGGTACCTGCT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCAGCACAGGAGCCATCTaGGTCACACATAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSTGAI*VTHKLV
Trigger: AACCAGCTTATGTGTGACTCAGATGGCTCCTGTGCT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGTTATAAGTCGGCTCTaGGTAGCTGTGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGVISRL*VAVLLS
Trigger: TGAAAGCAACACAGCTACTCAGAGCCGACTTATAAC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAAGGCCAGGCATAGCTaGGGGCTGTGGGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPKARHS*GLWGSA
Trigger: AGCACTGCCCCACAGCCCTCAGCTATGCCTGGCCTT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGGATCTGGCTGGCTGTaGGGTCCTCCTCCTCGGATG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNGSGWL*GPPPRM
Trigger: CATCCGAGGAGGAGGACCTCACAGCCAGCCAGATCC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGCGGCAAGGATGGCTaGGAAGAAGGGCGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCGGKDG*EEGRGR
Trigger: CCTCCCTCGCCCTTCTTCTCAGCCATCCTTGCCGCC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNREDTE*RCPSMA
Trigger: TGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGTGCTAGAAAACAGTaGGACACAAGGAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGSARKQ*DTRRHL
Trigger: AAGATGCCTCCTTGTGTCTCACTGTTTTCTAGCACT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGCTCCGGCCGGGAGTaGTCATCTAAAGGACACGGC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGSGRE*SSKGHG
Trigger: GCCGTGTCCTTTAGATGAGCACTCCCGGCCGGAGCC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCTGCATTCAAAAGCTaGTGGGAGTTCATTGATGGA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGAAFKS*WEFIDG
Trigger: TCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACCACAATATGCATATTaGCAGTGTTGGGACCAAGGT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGPQYAY*QCWDQG
Trigger: ACCTTGGTCCCAACACTGGCAATATGCATATTGTGG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGGGAATTTGGCTTGTaGCAACACTCCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGREFGL*QHSNDF
Trigger: GAAGTCATTGGAGTGTTGGCACAAGCCAAATTCCCT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCATTCCACCAACCACTaGAGATCCACATTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQHSTNH*RSTLWV
Trigger: CACCCACAATGTGGATCTGCAGTGGTTGGTGGAATG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGAGGGCTGTCTGCAATaGAACTTCACTCAACTGGTG +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVEGCLQ*NFTQLV
Trigger: CACCAGTTGAGTGAAGTTGCATTGCAGACAGCCCTC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCTTGCGAGGGCTGTCTaGAATGCAACTTCACTCAAC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVLARAV*NATSLN
Trigger: GTTGAGTGAAGTTGCATTGCAGACAGCCCTCGCAAG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTGGAGCAGGGGCTGCTaGACACTAGGGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLWSRGC*TLGRPF
Trigger: GAAGGGCCTCCCTAGTGTGCAGCAGCCCCTGCTCCA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAAGACTCTAAACTGCTaGTCGCTGTTTGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGKTLNC*SLFVSS
Trigger: GGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATGATTAGGTCTGAGTaGTCCAGGATCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQMIRSE*SRIWLA
Trigger: AGCCAGCCAGATCCTGGAGCACTCAGACCTAATCAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGGCATCGTCACAGGCTaGGGGCTGAAAGGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLGIVTG*GLKGGK
Trigger: CTTGCCGCCTTTCAGCCCGCAGCCTGTGACGATGCC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATCACGGTGGTTCTCTaGTGGGTAAGAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQITVVL*WVRSHG
Trigger: ACCATGGCTTCTTACCCAGCAGAGAACCACCGTGAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGAGGACATATTCTCCTaGTTTACTGTCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPEDIFS*FTVWVH
Trigger: GTGGACCCAGACAGTAAACCAGGAGAATATGTCCTC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGGCTGCCATCCTCATGCACGGTaGTGTCCTCCTCCTCACGAA +
Preference number: 4 (lower is better)
Translates to: ADKFGSDSPEVISKVTGCHPHAR*CPPPHE
Trigger: TTCGTGAGGAGGAGGACACCACCGTGCATGAGGATG...GCAGCCAGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATATCTCCAAGGTAACTaGCTGCATCACAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGYLQGN*LHHRLG
Trigger: TCCTAACCTGTGATGCAGCCAGTTACCTTGGAGATA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAAACCTTCTACAGCGTaGAGTACACTGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQKPSTA*STLQWG
Trigger: TCCCCACTGCAGTGTACTCCACGCTGTAGAAGGTTT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTTGCGTGTGGCCACCTaGAAACTGCAGAGTAAAACC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVLRVAT*KLQSKT
Trigger: GGTTTTACTCTGCAGTTTCCAGGTGGCCACACGCAA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAATTAATTGGGCTATTTaGGTCCACCAGAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGINWAI*VHQRHH
Trigger: GTGATGCCTCTGGTGGACCCAAATAGCCCAATTAAT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCACGCTGTAGAGGGGTaGCAGCGGGCCGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCHAVEG*QRAVCS
Trigger: GGAACACACGGCCCGCTGCCACCCCTCTACAGCGTG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTTCATGGCACCAAAGTaGACCAAATGCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCFMAPK*TKCPGR
Trigger: ACGACCAGGGCATTTGGTCCACTTTGGTGCCATGAA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAACTGGTGCTCCAGATaGAAGCCTGATTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGNWCSR*KPDLES
Trigger: AGATTCCAAATCAGGCTTCCATCTGGAGCACCAGTT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCGGTGTTGCCGCTGGTaGTTCCCGGGTTCATGTTTA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNRCCRW*FPGSCL
Trigger: TAAACATGAACCCGGGAACCACCAGCGGCAACACCG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCCACCATGGATATTTTaGACACTGGTGTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPPPWIF*TLVSAD
Trigger: GTCTGCTGACACCAGTGTCCAAAATATCCATGGTGG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGGAAACCCAATAGCGTaGGATGCATCCACCATGGAT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVGNPIA*DASTMD
Trigger: ATCCATGGTGGATGCATCCCACGCTATTGGGTTTCC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAAGGTAAAACAAGGCTaGCTGACCGAGAAACTACCA +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGKVKQG*LTEKLP
Trigger: TGGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCCGCCTCCCGATGATTaGAGTCTCCGAAATATCGAA +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVPPPDD*SLRNIE
Trigger: TTCGATATTTCGGAGACTCCAATCATCGGGAGGCGG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGCAGCACTGCCAGTTTaGAACCCAGTGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLAALPV*NPVGTG
Trigger: TCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPQCSRL*YATEVT
Trigger: AGTGACTTCCGTTGCATACCAAAGCCGACTACACTG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGGCCCACAGAGCTTTTaGCTGTCCTCTCTGAACGCT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNGPQSF*LSSLNA
Trigger: AGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGACAAAGTCCTGCCGTaGCCCACAGAGCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNDKVLP*PTELLA
Trigger: AGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGCCAACGGGAGAAGCTaGAAATATGGATGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPANGRS*KYGWSL
Trigger: AAGAGACCATCCATATTTCCAGCTTCTCCCGTTGGC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTAGAAAGGGAGCTCATTaGGCTGATGACCTGATCAAA +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPRKGAH*ADDLIK
Trigger: TTTGATCAGGTCATCAGCTCAATGAGCTCCCTTTCT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGGACCCAGGGGTCTTTaGCAGACTGTGCAAATATCC +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNGPRGL*QTVQIS
Trigger: GGATATTTGCACAGTCTGTCAAAGACCCCTGGGTCC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAAACTAAGGACTCTGTaGTCTCAATGCTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGKLRTL*SQCSLV
Trigger: GACTAGAGAGCATTGAGATCACAGAGTCCTTAGTTT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTTTCCTCTCAGCCCGTaGGAAGCAGTCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLFPLSP*EAVTSP
Trigger: AGGTGACGTGACTGCTTCTCACGGGCTGAGAGGAAA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTGGCCGTCATGTACATaGGGTTGTTCAGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNWPSCT*GCSGPV
Trigger: CACTGGTCCTGAACAACCTCATGTACATGACGGCCA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAGCTCTTCCATGGTTTaGATGGTGTTGTTACGGCAC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSSSMV*MVLLRH
Trigger: GTGCCGTAACAACACCATTCAAACCATGGAAGAGCT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCTAGAGGTGGTTCCTaGGGCTGCTGCGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLARGGS*GCCGSL
Trigger: AAGGCTTCCGCAGCAGCCTCAGGAACCACCTCTAGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGTCAGGCACCGGGGATaGCTGGTCCTCTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLVRHRG*LVLSQE
Trigger: TTCCTGAGAGAGGACCAGTCATCCCCGGTGCCTGAC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGACATGTGCAAGATTTaGAAGTTTGGGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGDMCKI*KFGVLL
Trigger: GAGAAGAACCCCAAACTTTCAAATCTTGCACATGTC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCTAGGAGTGCTTCCTaGCAGTTGGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLARSAS*QLALLQ
Trigger: CTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGATCTGGCTGGCTGTaGGGTCCTCCTCCTCGGATG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCGSGWL*GPPPRM
Trigger: CATCCGAGGAGGAGGACCTCACAGCCAGCCAGATCC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCTGGTGTTAAAGGAATaGGGTTCTGCAGGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLVLKE*GSAGVE
Trigger: CTCGACCCCTGCAGAACCTCATTCCTTTAACACCAG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATGCATGCCTGACAGGTaGAAAGACTTGGAATTTATC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGCMPDR*KDLEFI
Trigger: GATAAATTCCAAGTCTTTTCACCTGTCAGGCATGCA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTTTGGCTGTCCTCTCTaGACGCTCTCTTCACTCATT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCFGCPL*TLSSLI
Trigger: AATGAGTGAAGAGAGCGTTCAGAGAGGACAGCCAAA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCTGCCGCAAAGCTTTaGCGAGTTCGTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSAAKL*RVRCSS
Trigger: TGAAGAACAACGAACTCGGCAAAGCTTTGCGGCAGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCGGAGCAGAGAGAGATaGTCGGCCGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCRSRER*SAAPPP
Trigger: AGGAGGAGGAGCGGCCGAGCATCTCTCTCTGCTCCG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR GCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTGGGTTGAGACTGAATaGTTTTGCTGGTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPWVETE*FCWFSH
Trigger: GTGGGAAAACCAGCAAAAGCATTCAGTCTCAACCCA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTCCCCATCTTTCTGCTaGAAGCTATCAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSPSFC*KLSAMT
Trigger: GGTCATAGCTGATAGCTTGCAGCAGAAAGATGGGGA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTCCCCATCTTTCTGCTaGAAGCTATCAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSPSFC*KLSAMT
Trigger: GGTCATAGCTGATAGCTTGCAGCAGAAAGATGGGGA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGGTTCCCCATCTTTCTaGTGCAAGCTATCAGCTATG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCGSPSF*CKLSAM
Trigger: CATAGCTGATAGCTTGCAGCAGAAAGATGGGGAACC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCAGCGTGGAGTACACTaGAGTGGGGACCTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNQRGVH*SGDLVP
Trigger: CGGAACGAGGTCCCCACTGCAGTGTACTCCACGCTG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTGGCCACCTGGAAACTaGAGAGTAAAACCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQWPPGN*RVKPEQ
Trigger: TTGCTCTGGTTTTACTCTGCAGTTTCCAGGTGGCCA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTTAAAACGGACAGTTTaGGTGTGGCCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCLKRTV*VWPPGN
Trigger: GTTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCATAGTTGTCTCCGCTaGCGGCAGTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNHSCLR*RQCWFS
Trigger: AGAAAACCAGCACTGCCGGCAGCGGAGACAACTATG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCTCCCACCGATGGGGTaGCTATGGCCTTGTTATCGT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLLPPMG*LWPCYR
Trigger: ACGATAACAAGGCCATAGGCACCCCATCGGTGGGAG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCAAGTTGGCCACCATTaGACTAAAATGTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQQVGHH*TKMCPD
Trigger: ATCCGGGCACATTTTAGTGCAATGGTGGCCAACTTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTATACTTCCCGGTCTTTaGTCAGCGACTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPILPGL*SATFFE
Trigger: CTCAAAGAAAGTCGCTGAGCAAAGACCGGGAAGTAT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACCTTTCAGCAGCAGCTaGTGCAGCCCGGAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPPFSSS*CSPEKS
Trigger: CGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCCTTTCAGCAGCAGCTaGTGCAGCCCGGAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFPFSSS*CSPEKS
Trigger: CGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCGCTCCTCCAGAATCTaGATATCACACTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVRSSRI*ISHLSR
Trigger: CCTGGATAAGTGTGATATGCAGATTCTGGAGGAGCG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAACCAGAAACGCCGGCTaGCGGCCGCCCACCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTTRNAG*RPPTSS
Trigger: CGAGCTGGTGGGCGGCCGGCAGCCGGCGTTTCTGGT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGAGGACATATTCTCCTaGTTTACTGTCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQEDIFS*FTVWVH
Trigger: GTGGACCCAGACAGTAAACCAGGAGAATATGTCCTC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCAAGCCAAGAGAGTGTaGCCTCTTTCCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQQAKRV*PLSCCC
Trigger: ACAACAACAGGAAAGAGGCCACACTCTCTTGGCTTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTTCTTCGGAGTCCCCTaGTTGACAGGTAATTACTCC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCFFGVP*LTGNYS
Trigger: GGAGTAATTACCTGTCAACCAGGGGACTCCGAAGAA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCACGCTGTAGAGGGGTaGCAGCGGGCCGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFHAVEG*QRAVCS
Trigger: GGAACACACGGCCCGCTGCCACCCCTCTACAGCGTG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACACGCTGTAGAGGGGTaGCAGCGGGCCGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTHAVEG*QRAVCS
Trigger: GGAACACACGGCCCGCTGCCACCCCTCTACAGCGTG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATCAGGACCAGTGACGTaGCTTCTGGAGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSGPVT*LLESPS
Trigger: GCTGGGGCTCTCCAGAAGCCACGTCACTGGTCCTGA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCAGGACCAGTGACGTaGCTTCTGGAGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSGPVT*LLESPS
Trigger: GCTGGGGCTCTCCAGAAGCCACGTCACTGGTCCTGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTATTGCACCTGTGGAGTaGCCCCCGGGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLIAPVE*PPGSDG
Trigger: ACCATCACTCCCCGGGGGCCACTCCACAGGTGCAAT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATTGCACCTGTGGAGTaGCCCCCGGGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNIAPVE*PPGSDG
Trigger: ACCATCACTCCCCGGGGGCCACTCCACAGGTGCAAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCAATATTGCACCTGTaGAGTGGCCCCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNAILHL*SGPRGV
Trigger: CACTCCCCGGGGGCCACTCCACAGGTGCAATATTGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGGTGTGATGTCTTCATaGCACCAAAGTGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPGVMSS*HQSGPN
Trigger: ATTTGGTCCACTTTGGTGCCATGAAGACATCACACC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTAACTGGTGCTCCAGATaGAAGCCTGATTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPNWCSR*KPDLES
Trigger: AGATTCCAAATCAGGCTTCCATCTGGAGCACCAGTT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTGTGGCACTTCGAGGTaGGTCAGAGGATCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLCGTSR*VRGSVD
Trigger: ATCGACCGATCCTCTGACCCACCTCGAAGTGCCACA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCCACCATGGATATTTTaGACACTGGTGTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVPPWIF*TLVSAD
Trigger: GTCTGCTGACACCAGTGTCCAAAATATCCATGGTGG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCCTTTTCCAGCTCACTaGAACAAGGACGTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQPFPAH*NKDVGV
Trigger: AACTCCAACGTCCTTGTTCCAGTGAGCTGGAAAAGG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGAGTGCTCCAGGATCTaGCTGGCTGTGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPECSRI*LAVRSS
Trigger: GGAGGACCTCACAGCCAGCCAGATCCTGGAGCACTC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQQCSRL*YATEVT
Trigger: AGTGACTTCCGTTGCATACCAAAGCCGACTACACTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGACAAAGTCCTGCCGTaGCCCACAGAGCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLDKVLP*PTELLA
Trigger: AGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCAGCTGGAAATATGGATaGTCTCTTCTTCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSWKYG*SLLRVP
Trigger: AGGCACCCGAAGAAGAGACCATCCATATTTCCAGCT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATCTTGCGTTCAGCCTaGGTGGTGAAGTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQILRSA*VVKLTN
Trigger: ATTTGTCAACTTCACCACTCAGGCTGAACGCAAGAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCCTGTCACAGGTTGTaGTGTCAGCGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFACHRL*CQRGVR
Trigger: CCTGACCCCGCGCTGACATCACAACCTGTGACAGGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTAAGCTGATAATGCTTTaGACCACATATGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPKLIML*TTYGFC
Trigger: GCAGAACCCATATGTGGTTCAAAGCATTATCAGCTT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGTTATAAGTCGGCTCTaGGTAGCTGTGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQVISRL*VAVLLS
Trigger: TGAAAGCAACACAGCTACTCAGAGCCGACTTATAAC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAACGCTCGAATTTCCTTaGGTATTAAAACGGACAGTT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGTLEFP*VLKRTV
Trigger: AACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCAACTTAGCTGATCCATaGCATCAATCATCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCNLADP*HQSSAC
Trigger: ACAGGCCGATGATTGATGTCATGGATCAGCTAAGTT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGATCCACATTGTGGGTaGGTGGTAATGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVDPHCG*VVMLLN
Trigger: ATTCAGCAACATTACCACTCACCCACAATGTGGATC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCATCATAATGGCTATTaGCCAGGACTGCGTTCCATT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCHHNGY*PGLRSI
Trigger: AATGGAACGCAGTCCTGGTCAATAGCCATTATGATG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAGGCCAGGCATAGCTaGGGGCTGTGGGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKARHS*GLWGSA
Trigger: AGCACTGCCCCACAGCCCTCAGCTATGCCTGGCCTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACTCAGCGACTTTCTTTaGGTATACAAAAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLSDFL*VYKKLC
Trigger: GCAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAGAAGAGGGGGAGTGTaGGCTCAGGGTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNRRGGV*AQGTSW
Trigger: CCAGGATGTACCCTGAGCTCACACTCCCCCTCTTCT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTGGCCGTCATGTACATaGGGTTGTTCAGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLWPSCT*GCSGPV
Trigger: CACTGGTCCTGAACAACCTCATGTACATGACGGCCA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACCTTGCTACTGGCCGTaGAGCGGTAGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTPCYWP*SGRRAG
Trigger: ACCCGCCCTTCTACCGCTTCACGGCCAGTAGCAAGG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCTAGAGGTGGTTCCTaGGGCTGCTGCGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQARGGS*GCCGSL
Trigger: AAGGCTTCCGCAGCAGCCTCAGGAACCACCTCTAGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCAGTAATAATGGTAGATaGAGCGCCCAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSNNGR*SAQSSR
Trigger: ACGAGAAGACTGGGCGCTTCATCTACCATTATTACT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGTCAGGCACCGGGGATaGCTGGTCCTCTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCVRHRG*LVLSQE
Trigger: TTCCTGAGAGAGGACCAGTCATCCCCGGTGCCTGAC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAACAGAGAAGCTTCGTTaGTGCCGGCTCCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPTEKLR*CRLRSA
Trigger: TGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTGTGGGATGGGTCCGTaGGACTGTCCTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFCGMGP*DCPSRR
Trigger: CCTCCTTGAAGGACAGTCTCACGGACCCATCCCACA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAATCGACAGACCACATTaGCCCACGTGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPIDRPH*PTWHSP
Trigger: GGGACTGTGCCACGTGGGTCAATGTGGTCTGTCGAT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGGATCTGGCTGGCTGTaGGGTCCTCCTCCTCGGATG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSGSGWL*GPPPRM
Trigger: CATCCGAGGAGGAGGACCTCACAGCCAGCCAGATCC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGGATCTGGCTGGCTGTaGGGTCCTCCTCCTCGGATG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTGSGWL*GPPPRM
Trigger: CATCCGAGGAGGAGGACCTCACAGCCAGCCAGATCC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGGCGGCAAGGATGGCTaGGAAGAAGGGCGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLGGKDG*EEGRGR
Trigger: CCTCCCTCGCCCTTCTTCTCAGCCATCCTTGCCGCC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATCACAGGCTGCGGGCTaGAAGGCGGCAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTSQAAG*KAARMA
Trigger: AGCCATCCTTGCCGCCTTTCAGCCCGCAGCCTGTGA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACGCCGCCCCAGACTCTaGTGTTCTCATGCTTTACCC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPRRPRL*CSHALP
Trigger: GGGTAAAGCATGAGAACATCAGAGTCTGGGGCGGCG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGTAACTCTGGGCCCTaGGGATCATGTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGNSGP*GSCPGS
Trigger: AGATCCGGGACATGATCCGCAGGGCCCAGAGTTACC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGGTAACTCTGGGCCCTaGGGATCATGTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFGNSGP*GSCPGS
Trigger: AGATCCGGGACATGATCCGCAGGGCCCAGAGTTACC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTGGCTGGCCATGTCTaGGGCATACAAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLAGHV*GIQRGW
Trigger: CCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAAGAAGCCCGAATCCTaGTGGCTGGCCATGTCTGCG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLKKPES*WLAMSA
Trigger: CGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGTTGCCTTACAATTTaGAAGCCAAGAGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCCCLTI*KPRECG
Trigger: GCCACACTCTCTTGGCTTGCAAATTGTAAGGCAACA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCCACAATATGCATATTaGCAGTGTTGGGACCAAGGT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQPQYAY*QCWDQG
Trigger: ACCTTGGTCCCAACACTGGCAATATGCATATTGTGG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAGGTCTGCCACAATATaGATATTGCCAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQRSATI*ILPVLG
Trigger: TCCCAACACTGGCAATATGCATATTGTGGCAGACCT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCACTCCAATGACTTCTaGATACAGGTCTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVHSNDF*IQVCHN
Trigger: ATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAGGGAATTTGGCTTGTaGCAACACTCCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQREFGL*QHSNDF
Trigger: GAAGTCATTGGAGTGTTGGCACAAGCCAAATTCCCT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGGGTTGAGACTGAATaGTTTTGCTGGTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCWVETE*FCWFSH
Trigger: GTGGGAAAACCAGCAAAAGCATTCAGTCTCAACCCA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCACTGGGTGAGCAGCTaGAGCAGCAACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLHWVSS*SSNFRD
Trigger: GTCCCTGAAGTTGCTGCTGCAGCTGCTCACCCAGTG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACACTGGGTGAGCAGCTaGAGCAGCAACTTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPHWVSS*SSNFRD
Trigger: GTCCCTGAAGTTGCTGCTGCAGCTGCTCACCCAGTG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGGGCTGTGGGGCAGTaGTTGGGTAAGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRAVGQ*LGKFSC
Trigger: GCAGGAGAACTTACCCAAGCACTGCCCCACAGCCCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAGGGCTGTGGGGCAGTaGTTGGGTAAGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLRAVGQ*LGKFSC
Trigger: GCAGGAGAACTTACCCAAGCACTGCCCCACAGCCCT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCCGGGAGGAGGAGCCTaGTGTCCACCAGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSPGGGA*CPPARC
Trigger: ACATCGAGCTGGTGGACAGCAGGCTCCTCCTCCCGG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGACGGGCTCTGTCTGCTaGAGCTCAAAGAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLTGSVC*SSKRSS
Trigger: AGAGCTTCTCTTTGAGCTGCAGCAGACAGAGCCCGT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGGCATCGGTAAGGGCTaGGGCTGCTTGGTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFGIGKG*GCLVSV
Trigger: TACAGAGACCAAGCAGCCGCAGCCCTTACCGATGCC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACCCATCTCTCGGGTCTaGAGGAGCACGGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPPISRV*RSTEAM
Trigger: CATTGCTTCCGTGCTCCTGCAGACCCGAGAGATGGG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGCTCCGTTCGGCAGTTaGGGTGTTGCCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTAPFGS*GVAAGG
Trigger: ACCACCAGCGGCAACACCGCAACTGCCGAACGGAGC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCCTTTCAGCAGCAGCTaGTGCAGCCCGGAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCPFSSS*CSPEKS
Trigger: CGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCCCAATAGCGTGGGATaGATCCACCATGGATATTTT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVPNSVG*IHHGYF
Trigger: AAAATATCCATGGTGGATGCATCCCACGCTATTGGG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCGCCCAGAAGAATTCTaGAGCTCATCATACCGCCTC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLRPEEF*SSSYRL
Trigger: GAGGCGGTATGATGAGCTGCAGAATTCTTCTGGGCG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATACCAAGCTTGTCTGGTaGTCAAGCAGATCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNTKLVW*SSRSRS
Trigger: GGATCTGGATCTGCTTGAGCACCAGACAAGCTTGGT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAACTCTGATGTTCTCATaGTTTACCCTGCACTTGTTT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGTLMFS*FTLHLF
Trigger: AAACAAGTGCAGGGTAAAGCATGAGAACATCAGAGT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTTCCAAAGATGTCATTaGGCCACAGACTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCFQRCH*ATDFCT
Trigger: AGTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCAGTTTGGAACCCAGTaGGGACAGGAGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLQFGTQ*GQEAPV
Trigger: GACAGGAGCCTCCTGTCCCCACTGGGTTCCAAACTG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCAGTTTGGAACCCAGTaGGGACAGGAGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNQFGTQ*GQEAPV
Trigger: GACAGGAGCCTCCTGTCCCCACTGGGTTCCAAACTG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCCGAATCCTGCTGGCTaGCCATGTCTGCGGCATACA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLPNPAG*PCLRHT
Trigger: TGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTCGCCAGGGTAAACTaGTCCAGTGCCCGATTGCCT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLARVN*SSARLP
Trigger: AGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTATCTCCAAGGTAACTaGCTGCATCACAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQYLQGN*LHHRLG
Trigger: TCCTAACCTGTGATGCAGCCAGTTACCTTGGAGATA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCAGAGGCATGTCCCTTaGTACCACACCGCGGGACCC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFQRHVP*YHTAGP
Trigger: GGGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGATGACTAGTTTCCACTaGGTGAGCAGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLMTSFH*VSSCSS
Trigger: GCTGCTGCAGCTGCTCACCCAGTGGAAACTAGTCAT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCTGTGGGGCAGTGCTTaGGTAAGTTCTCCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLWGSA*VSSPAG
Trigger: TCCGGCAGGAGAACTTACCCAAGCACTGCCCCACAG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCATTAATTGGGCTATTTaGGTCCACCAGAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVINWAI*VHQRHH
Trigger: GTGATGCCTCTGGTGGACCCAAATAGCCCAATTAAT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCGTTTCTTGTTCTCTaGTCTTCTTTCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQAFLVL*SSFQSF
Trigger: GAAGCTCTGGAAAGAAGACCAGAGAACAAGAAACGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTCTTCGGTGGTGAACTaGAACACACTGAATCAAGTT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPSSVVN*NTLNQV
Trigger: AACTTGATTCAGTGTGTTCCAGTTCACCACCGAAGA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGCTCAGGGTACATCCTaGCCAGCTCACATGACAAGA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLAQGTS*PAHMTR
Trigger: TCTTGTCATGTGAGCTGGCCAGGATGTACCCTGAGC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTTGACTTCGTCCTCTaGGCTGCTGGGGCTCGACCC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLDFVL*AAGARP
Trigger: GGGTCGAGCCCCAGCAGCCCAGAGGACGAAGTCAAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCAGGACCAGTGACGTaGCTTCTGGAGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCSGPVT*LLESPS
Trigger: GCTGGGGCTCTCCAGAAGCCACGTCACTGGTCCTGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAGCATTTTCCATTTCTaGCCCAGGAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSIFHF*PRNFIS
Trigger: GGAGATGAAGTTCCTGGGCCAGAAATGGAAAATGCT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTCTGGGAAATTTTCCTaGCCAGCAACCACTGTATTG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSGKFS*PATTVL
Trigger: CAATACAGTGGTTGCTGGCCAGGAAAATTTCCCAGA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGTTCTCCTCAGCATCTaGGAAATTTTCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNVLLSI*EIFLAS
Trigger: GCTGGCCAGGAAAATTTCCCAGATGCTGAGGAGAAC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGCAATATTGCACCTGTaGAGTGGCCCCCGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCAILHL*SGPRGV
Trigger: CACTCCCCGGGGGCCACTCCACAGGTGCAATATTGC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGGCACCGGGGATGACTaGTCCTCTCTCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPGTGDD*SSLRKS
Trigger: TGACTTCCTGAGAGAGGACCAGTCATCCCCGGTGCC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTGCGGTGTTGCCGCTaGTGGTTCCCGGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLRCCR*WFPGSC
Trigger: ACATGAACCCGGGAACCACCAGCGGCAACACCGCAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCACACAAGACATTCAGTaGAAACCCAATAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVTQDIQ*KPNSVG
Trigger: TCCCACGCTATTGGGTTTCCACTGAATGTCTTGTGT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGAGAGGTCACTGTGCTaGTATGAAGGTAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCERSLC*YEGKTR
Trigger: CCTTGTTTTACCTTCATACCAGCACAGTGACCTCTC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCCGAAATATCGAAGTaGAAGTCCAGGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSEISK*KSRVFP
Trigger: TGGGAAAACCCTGGACTTCCACTTCGATATTTCGGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGAGTGCTCCAGGATCTaGCTGGCTGTGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQECSRI*LAVRSS
Trigger: GGAGGACCTCACAGCCAGCCAGATCCTGGAGCACTC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCAGCACTGCCAGTTTaGAACCCAGTGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNAALPV*NPVGTG
Trigger: TCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTCACAGGGCCATGCATaGCATGACCCCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSSQGHA*HDPHGC
Trigger: GCACCCGTGGGGGTCATGCCATGCATGGCCCTGTGA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTTCTCCCTGTGTTCCTaGGGGATAGGTGTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLFSLCS*GIGVGD
Trigger: GTCACCAACACCTATCCCCCAGGAACACAGGGAGAA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCTGTTCTTTCTACTGTaGCTCCCAACAAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPLFFLL*LPTKLS
Trigger: AGAGAGTTTTGTTGGGAGCCACAGTAGAAAGAACAG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATACGGTGGTTCTCTGCTaGGTAAGAAGCCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNTVVLC*VRSHGR
Trigger: TCTACCATGGCTTCTTACCCAGCAGAGAACCACCGT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CAA 72 bp CAGGTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTaGAAGGCCGAGAAGACACTGAATGACGTTGCCCCA +
Preference number: 4 (lower is better)
Translates to: QVTRGRTVCPSL*KAEKTLNDVAP
Trigger: TGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCGTGCACCTGGCCGATaGGCTTACAGTAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRAPGR*AYSRTE
Trigger: TTCAGTCCTACTGTAAGCTCATCGGCCAGGTGCACG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGACTTCTGCACTCCCTaGTCTGCCGCAAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFDFCTP*SAAKLC
Trigger: GCAAAGCTTTGCGGCAGATCAGGGAGTGCAGAAGTC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQVEPEA*CNRCQR
Trigger: CCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCAC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCVEPEA*CNRCQR
Trigger: CCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCAC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAACTTGAGCTTGTCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACATCGGAGTCCCCTGGTTaGCAGGTAATTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: LNLSLSRSPHERRVSASTSESPG*QVITPS
Trigger: AGATGGAGTAATTACCTGTCAACCAGGGGACTCCGA...TGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGACAAGCTCAAGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAAGCTGATAATGCTTTaGACCACATATGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQKLIML*TTYGFC
Trigger: GCAGAACCCATATGTGGTTCAAAGCATTATCAGCTT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCAAGCTGATAATGCTTTaGACCACATATGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCKLIML*TTYGFC
Trigger: GCAGAACCCATATGTGGTTCAAAGCATTATCAGCTT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTAATAAGTTCAAGTTTTaGCATCCCATCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPNKFKF*HPIRKQ
Trigger: CTGCTTCCTGATGGGATGTCAAAACTTGAACTTATT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTATTTGCGATGAGCTCTaGATTTCTGATTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPICDEL*ISDFVG
Trigger: GCCAACAAAATCAGAAATTCAGAGCTCATCGCAAAT...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAAGGCCAGGCATAGCTaGGGGCTGTGGGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLKARHS*GLWGSA
Trigger: AGCACTGCCCCACAGCCCTCAGCTATGCCTGGCCTT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCCGACTGGAGCCGAGTaGAGGCATAAGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFPTGAE*RHKARH
Trigger: ATGCCTGGCCTTATGCCTTCACTCGGCTCCAGTCGG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCAAACTAAGGACTCTGTaGTCTCAATGCTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVKLRTL*SQCSLV
Trigger: GACTAGAGAGCATTGAGATCACAGAGTCCTTAGTTT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTTTCCTCTCAGCCCGTaGGAAGCAGTCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLFPLSP*EAVTSP
Trigger: AGGTGACGTGACTGCTTCTCACGGGCTGAGAGGAAA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAATACAGATACAACGTaGCGTAGAAAATTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGNTDTT*RRKLVS
Trigger: GCTCACTAATTTTCTACGTCACGTTGTATCTGTATT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCTGACAGAGGTTGCTTaGGGGCCCGGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLTEVA*GPGISG
Trigger: TCCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTGACAGAGGTTGCTTaGGGGCCCGGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLTEVA*GPGISG
Trigger: TCCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTGTTGGGTACAAGCCTaGATTCTGTCCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLCWVQA*ILSSVA
Trigger: TGCCACACTGGACAGAATTCAGGCTTGTACCCAACA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTGTGGGATGGGTCCGTaGGACTGTCCTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCCGMGP*DCPSRR
Trigger: CCTCCTTGAAGGACAGTCTCACGGACCCATCCCACA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCCATCAAGGCCACTGTaGCCCAGAATATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNPSRPL*PRIWWP
Trigger: TGGCCACCATATTCTGGGTCACAGTGGCCTTGATGG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAATCGACAGACCACATTaGCCCACGTGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQIDRPH*PTWHSP
Trigger: GGGACTGTGCCACGTGGGTCAATGTGGTCTGTCGAT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGTCCTCCTCCTCGGATaGTTCATCGGAGTCCTCATG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNVLLLG*FIGVLM
Trigger: CATGAGGACTCCGATGAATCATCCGAGGAGGAGGAC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGGCGGCAAGGATGGCTaGGAAGAAGGGCGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQGGKDG*EEGRGR
Trigger: CCTCCCTCGCCCTTCTTCTCAGCCATCCTTGCCGCC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNREDTE*RCPSMA
Trigger: TGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAGGCCGAGAAGACACTaGATGACGTTGCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNRPRRH*MTLPQH
Trigger: ATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGAAAGACGGCATAAATaGGATTGTTACATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGERRHK*DCYMFL
Trigger: GAGAAACATGTAACAATCTCATTTATGCCGTCTTTC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTCCTTGCTGTCCCTTTaGCAAAGTGACCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLSLLSL*QSDPAS
Trigger: AGAAGCAGGGTCACTTTGTCAAAGGGACAGCAAGGA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTTATTTGCTGGACGCTaGTCTCCCTGCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLFAGR*SPCSPR
Trigger: CCGAGGGCTGCAGGGAGATCAGCGTCCAGCAAATAA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTGCACTCCCTGATCTaGCGCAAAGCTTTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLHSLI*RKALPS
Trigger: ACTCGGCAAAGCTTTGCGGCAGATCAGGGAGTGCAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGTCCAGTGCCCGATTaGCTTTTTCTTCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGPVPD*LFLPPQ
Trigger: CTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGGTCCAGTGCCCGATTaGCTTTTTCTTCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLGPVPD*LFLPPQ
Trigger: CTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTTCTGCATACAGGTCTaGCACAATATGCATATTGCC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCFCIQV*HNMHIA
Trigger: GGCAATATGCATATTGTGGCAGACCTGTATGCAGAA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCACCACATATGGGTTCTaGTCTTTGTGCCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCTTYGF*SLCRNS
Trigger: AGAATTACGGCACAAAGAGCAGAACCCATATGTGGT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCAGCGTGGAGTACACTaGAGTGGGGACCTCGTTCCG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFQRGVH*SGDLVP
Trigger: CGGAACGAGGTCCCCACTGCAGTGTACTCCACGCTG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTGGTGCCTCAGACTTTaGTGGGGGAAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNWCLRL*WGKRNL
Trigger: AAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAAGATGAAAAGGTGGTaGCTCAGACTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLKMKRW*LRLCWG
Trigger: CCCCCAGCAAAGTCTGAGGCACCACCTTTTCATCTT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCCGGGAGGAGGAGCCTaGTGTCCACCAGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLPGGGA*CPPARC
Trigger: ACATCGAGCTGGTGGACAGCAGGCTCCTCCTCCCGG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGGCGGGTTGTCACAATaGTGGACGATGGGGTTCACG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQGGLSQ*WTMGFT
Trigger: CGTGAACCCCATCGTCCAGCATTGTGACAACCCGCC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATATCCTCCAGAGCTATTaGTGTATCTTGACTCGAGGC +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNILQSY*CILTRG
Trigger: GCCTCGAGTCAAGATACAGCAATAGCTCTGGAGGAT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCCCATCTCTCGGGTCTaGAGGAGCACGGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCPISRV*RSTEAM
Trigger: CATTGCTTCCGTGCTCCTGCAGACCCGAGAGATGGG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCTCAATGAGCTTGTTTaGCTTCTCATCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLNELV*LLICFS
Trigger: GCTGAAACAGATGAGAAGGCAAACAAGCTCATTGAG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCCAAAGTGGACCAAATaGCCTGGTCGTGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLPKWTK*PGREKL
Trigger: GAGTTTCTCACGACCAGGGCATTTGGTCCACTTTGG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCGGCAGTTGCGGTGTTaGCGCTGGTGGTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWRQLRC*RWWFPG
Trigger: ACCCGGGAACCACCAGCGGCAACACCGCAACTGCCG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGCAGTTGCGGTGTTaGCGCTGGTGGTTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQRQLRC*RWWFPG
Trigger: ACCCGGGAACCACCAGCGGCAACACCGCAACTGCCG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGTAGCGAGTTGCATATaGTCGGTCAAATGTAACACA +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVVASCI*SVKCNT
Trigger: TGTGTTACATTTGACCGAGCATATGCAACTCGCTAC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCATTCAGATCATACATaGGAGGGGTGCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFHSDHT*EGCPLG
Trigger: CCCCAAGGGGCACCCCTCGCATGTATGATCTGAATG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATTGCTGTCATCAACTaGCATTGTGGGGGATACATT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQIAVIN*HCGGYI
Trigger: AATGTATCCCCCACAATGGCAGTTGATGACAGCAAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCACTCCAGCATGGACTaGATGGCTGCTTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLHSSMD*MAASVD
Trigger: GTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGTG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTCAGCTCCATCAGCTTaGTGCAGATCTCGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNSAPSA*CRSRSG
Trigger: GCCTGACCGAGATCTGCACCAAGCTGATGGAGCTGA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACGTGCCAGAAGCAGGTaGAACCGGAGGCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPRARSR*NRRLDV
Trigger: TACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGAGGACATATTCTCCTaGTTTACTGTCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNEDIFS*FTVWVH
Trigger: GTGGACCCAGACAGTAAACCAGGAGAATATGTCCTC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAGCCCGAATCCTGCTaGCTGGCCATGTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKPESC*LAMSAA
Trigger: TGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCATTCAAAAGCTGCTaGGAGTTCATTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCAFKSC*EFIDGT
Trigger: AGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCATTCAAAAGCTGCTaGGAGTTCATTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQAFKSC*EFIDGT
Trigger: AGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCTCGCCAGGGTAAACTaGTCCAGTGCCCGATTGCCT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLARVN*SSARLP
Trigger: AGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAATAAGCTGGTTGATGTaGCTGCGCCAGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RSPHERRVSASTKSVGHSISWLM*LRQASS
Trigger: CGAGGAGGCCTGGCGCAGCCACATCAACCAGCTTAT...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAATAAGCTGGTTGATGTaGCTGCGCCAGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQISWLM*LRQASS
Trigger: CGAGGAGGCCTGGCGCAGCCACATCAACCAGCTTAT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGGCTGCCAAGCCAAGAGAGTGTaGCCTCTTTCCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: ADKFGSDSPEVISKVTGCQAKRV*PLSCCC
Trigger: ACAACAACAGGAAAGAGGCCACACTCTCTTGGCTTG...GCAGCCAGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAAACCTTCTACAGCGTaGAGTACACTGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLKPSTA*STLQWG
Trigger: TCCCCACTGCAGTGTACTCCACGCTGTAGAAGGTTT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCGGACAGTTTGCGTGTaGCCACCTGGAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLRTVCV*PPGNCR
Trigger: TCTGCAGTTTCCAGGTGGCCACACGCAAACTGTCCG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCAAATATCCAGACATaGGAAGGGCTTTTCACATCA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQANIQT*EGLFTS
Trigger: TGATGTGAAAAGCCCTTCCCATGTCTGGATATTTGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCAAATATCCAGACATaGGAAGGGCTTTTCACATCA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCANIQT*EGLFTS
Trigger: TGATGTGAAAAGCCCTTCCCATGTCTGGATATTTGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACGTTGGGGTGTGTTGTaGGGAATCGCTGGCTTACCT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPRWGVL*GIAGLP
Trigger: AGGTAAGCCAGCGATTCCCCACAACACACCCCAACG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCGTTGGGGTGTGTTGTaGGGAATCGCTGGCTTACCT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLRWGVL*GIAGLP
Trigger: AGGTAAGCCAGCGATTCCCCACAACACACCCCAACG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGACTCGAGGCGAGTGTaGGCTCTGATGACATTACTA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLDSRRV*ALMTLL
Trigger: TAGTAATGTCATCAGAGCCCACACTCGCCTCGAGTC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGCACCGGGGATGACTaGTCCTCTCTCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCGTGDD*SSLRKS
Trigger: TGACTTCCTGAGAGAGGACCAGTCATCCCCGGTGCC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCTGTTAGTTTACTGCTaGAGCTTAAATCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCLLVYC*SLNLVR
Trigger: CCTCACCAGATTTAAGCTCCAGCAGTAAACTAACAG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTGGTGGCCAGCAGGTTaGTGGGATGGTTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLWWPAG*WDGLCG
Trigger: CCCACATAAACCATCCCACCAACCTGCTGGCCACCA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCCGCCTCCCGATGATTaGAGTCTCCGAAATATCGAA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLPPPDD*SLRNIE
Trigger: TTCGATATTTCGGAGACTCCAATCATCGGGAGGCGG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGTGCTTCCTGACAGTTaGCGCTCCTCCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLVLPDS*RSSRIC
Trigger: GCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCAC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGTGCTTCCTGACAGTTaGCGCTCCTCCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPVLPDS*RSSRIC
Trigger: GCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCAC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGAGTGCTCCAGGATCTaGCTGGCTGTGAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSECSRI*LAVRSS
Trigger: GGAGGACCTCACAGCCAGCCAGATCCTGGAGCACTC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGAAAGGCGGCAAGGATaGCTGAGAAGAAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCERRQG*LRRRAR
Trigger: CCTCGCCCTTCTTCTCAGCCATCCTTGCCGCCTTTC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCAGTATTGCTACACGTTaGAAGTTCTGCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSIATR*KFCHPL
Trigger: AAGAGGATGGCAGAACTTCCAACGTGTAGCAATACT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCTTACAGTTTTCAGTaGCCAGCTTCATTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSYSFQ*PASFCL
Trigger: CAGGCAAAATGAAGCTGGCCACTGAAAACTGTAAGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGGGCTCTGCTGGCGTaGGGCTGCATCCTACACAAT +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQWALLA*GCILHN
Trigger: ATTGTGTAGGATGCAGCCCCACGCCAGCAGAGCCCA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGGCCCACAGAGCTTTTaGCTGTCCTCTCTGAACGCT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFGPQSF*LSSLNA
Trigger: AGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGACAAAGTCCTGCCGTaGCCCACAGAGCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPDKVLP*PTELLA
Trigger: AGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTVEPEA*CNRCQR
Trigger: CCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCAC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGTCTGGGTCCACATTaGTGGGTAGCATGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQCLGPH*WVAWLA
Trigger: CGCCAACCATGCTACCCATCAATGTGGACCCAGACA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATATCTTGCGTTCAGCCTaGGTGGTGAAGTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNILRSA*VVKLTN
Trigger: ATTTGTCAACTTCACCACTCAGGCTGAACGCAAGAT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCAATAAGTTCAAGTTTTaGCATCCCATCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCNKFKF*HPIRKQ
Trigger: CTGCTTCCTGATGGGATGTCAAAACTTGAACTTATT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATGGAAGAACTTAGCTaGTCCATGACATCAATCATC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCMEELS*SMTSII
Trigger: GATGATTGATGTCATGGATCAGCTAAGTTCTTCCAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGATCCACATTGTGGGTaGGTGGTAATGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNDPHCG*VVMLLN
Trigger: ATTCAGCAACATTACCACTCACCCACAATGTGGATC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGACCCAGGGGTCTTTaGCAGACTGTGCAAATATCC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGPRGL*QTVQIS
Trigger: GGATATTTGCACAGTCTGTCAAAGACCCCTGGGTCC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGAAGAGGGGGAGTGTaGGCTCAGGGTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFRRGGV*AQGTSW
Trigger: CCAGGATGTACCCTGAGCTCACACTCCCCCTCTTCT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTGGCCGTCATGTACATaGGGTTGTTCAGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLWPSCT*GCSGPV
Trigger: CACTGGTCCTGAACAACCTCATGTACATGACGGCCA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCAGGAACTGCAAGGTaGTCCTCAGGTTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSGTAR*SSGCCS
Trigger: GGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATCAGGAACTGCAAGGTaGTCCTCAGGTTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSGTAR*SSGCCS
Trigger: GGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACCTTGCTACTGGCCGTaGAGCGGTAGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTPCYWP*SGRRAG
Trigger: ACCCGCCCTTCTACCGCTTCACGGCCAGTAGCAAGG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCTAGAGGTGGTTCCTaGGGCTGCTGCGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLARGGS*GCCGSL
Trigger: AAGGCTTCCGCAGCAGCCTCAGGAACCACCTCTAGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACTGACAGAGGTTGCTTaGGGGCCCGGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQLTEVA*GPGISG
Trigger: TCCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGAGAAGCTTCGTTaGTGCCGGCTCCGTTCGGCA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSTEKLR*CRLRSA
Trigger: TGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACAGAGGATCGGTCGATaGCACCAAACTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPQRIGR*HQTSWA
Trigger: TGCCCAAGAAGTTTGGTGTCATCGACCGATCCTCTG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCAGAGGATCGGTCGATaGCACCAAACTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFQRIGR*HQTSWA
Trigger: TGCCCAAGAAGTTTGGTGTCATCGACCGATCCTCTG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCCATCAAGGCCACTGTaGCCCAGAATATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCPSRPL*PRIWWP
Trigger: TGGCCACCATATTCTGGGTCACAGTGGCCTTGATGG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTCAGCATATGCTTCATaGAGGTATCGACAGACCACA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNSAYAS*RYRQTT
Trigger: TGTGGTCTGTCGATACCTTCATGAAGCATATGCTGA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCTAGGAGTGCTTCCTaGCAGTTGGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLARSAS*QLALLQ
Trigger: CTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCACAGGCTGCGGGCTaGAAGGCGGCAAGGATGGCT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSQAAG*KAARMA
Trigger: AGCCATCCTTGCCGCCTTTCAGCCCGCAGCCTGTGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACGAGAAGACACTGAATaGCGTTGCCCCAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQREDTE*RCPSMA
Trigger: TGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGTTCACGCATGTGTGTaGTGCCTACAATTAATTACA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCVHACV*CLQLIT
Trigger: TGTAATTAATTGTAGGCATCACACACATGCGTGAAC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGTCCCTTTGACAAAGTaGCCCTGCTTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLVPLTK*PCFSFR
Trigger: CCTGAAGGAGAAGCAGGGTCACTTTGTCAAAGGGAC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTTTGGCTGTCCTCTCTaGACGCTCTCTTCACTCATT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLFGCPL*TLSSLI
Trigger: AATGAGTGAAGAGAGCGTTCAGAGAGGACAGCCAAA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCATGGACTGGATGGCTaGTTCAGTGGACGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLHGLDG*FSGREG
Trigger: ACCTTCACGTCCACTGAAGCAGCCATCCAGTCCATG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTTTCTCCCTGTGCGTaGCAGAAGCAGGTGGAACCG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLSPCA*QKQVEP
Trigger: CGGTTCCACCTGCTTCTGGCACGCACAGGGAGAAAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCTTTCTCCCTGTGCGTaGCAGAAGCAGGTGGAACCG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLSPCA*QKQVEP
Trigger: CGGTTCCACCTGCTTCTGGCACGCACAGGGAGAAAG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATCCTCAATGCCATTTTaGCTTTTATACCAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGSSMPF*LLYQSN
Trigger: ATTTGACTGGTATAAAAGGCAAAATGGCATTGAGGA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAGAAGCCCGAATCCTaGTGGCTGGCCATGTCTGCG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKKPES*WLAMSA
Trigger: CGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS-3UTR GCA 90 bp TCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATGAAAGATCATCCTCATaGACGGTGGTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRSPHERRVSASTKSVGHERSSS*TVVSSS
Trigger: GGAGGAGGACACCACCGTGCATGAGGATGATCTTTC...ATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGAAAGATCATCCTCATaGACGGTGGTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLERSSS*TVVSSS
Trigger: GGAGGAGGACACCACCGTGCATGAGGATGATCTTTC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGTATCCAAATATTCTTaGAGTTCTAACACACTGAAC +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGVSKYS*SSNTLN
Trigger: GTTCAGTGTGTTAGAACTGCAAGAATATTTGGATAC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGGCTGCTGTTGCCTTACAATTTaGAAGCCAAGAGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ADKFGSDSPEVISKVTGCCCLTI*KPRECG
Trigger: GCCACACTCTCTTGGCTTGCAAATTGTAAGGCAACA...GCAGCCAGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCACTCCAATGACTTCTaGATACAGGTCTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNHSNDF*IQVCHN
Trigger: ATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATCGTCATCCTCAGGCTaGCCCAGGGCAATAAACAAC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSSSSG*PRAINN
Trigger: GTTGTTTATTGCCCTGGGGCAGCCTGAGGATGACGA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTGGGTAAGTTCTCCTaGCGGAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLGKFS*RRKLKR
Trigger: CCTCTTCAGCTTCCTCCGGCAGGAGAACTTACCCAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGGGCTGTGGGGCAGTaGTTGGGTAAGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFRAVGQ*LGKFSC
Trigger: GCAGGAGAACTTACCCAAGCACTGCCCCACAGCCCT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACATTGCACTAAAATGTaGCCGGATATCTTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGHCTKM*PDIFKN
Trigger: ATTCTTAAAGATATCCGGGCACATTTTAGTGCAATG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTGGTGCCTCAGACTTTaGTGGGGGAAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLWCLRL*WGKRNL
Trigger: AAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCCGGGAGGAGGAGCCTaGTGTCCACCAGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWPGGGA*CPPARC
Trigger: ACATCGAGCTGGTGGACAGCAGGCTCCTCCTCCCGG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTACGGGCTCTGTCTGCTaGAGCTCAAAGAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLTGSVC*SSKRSS
Trigger: AGAGCTTCTCTTTGAGCTGCAGCAGACAGAGCCCGT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGGCGGGTTGTCACAATaGTGGACGATGGGGTTCACG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFGGLSQ*WTMGFT
Trigger: CGTGAACCCCATCGTCCAGCATTGTGACAACCCGCC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGGTAAGGGCTGCGGCTaGTTGGTCTCTGTAATAGTC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFGKGCG*LVSVIV
Trigger: GACTATTACAGAGACCAAGCAGCCGCAGCCCTTACC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGTAAGGGCTGCGGCTaGTTGGTCTCTGTAATAGTC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGKGCG*LVSVIV
Trigger: GACTATTACAGAGACCAAGCAGCCGCAGCCCTTACC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGGTAAGGGCTGCGGCTaGTTGGTCTCTGTAATAGTC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPGKGCG*LVSVIV
Trigger: GACTATTACAGAGACCAAGCAGCCGCAGCCCTTACC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAATGGAAATTGCTGTTaGAAGAGAGGGCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQNGNCC*KRGQSR
Trigger: TCTTGATTGCCCTCTCTTGCAACAGCAATTTCCATT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTGTGCTGACAGAGGTTaGTTGAGGGCCCGGAATATC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNCADRG*LRARNI
Trigger: GATATTCCGGGCCCTCAAGCAACCTCTGTCAGCACA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATGTGCTGACAGAGGTTaGTTGAGGGCCCGGAATATC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPCADRG*LRARNI
Trigger: GATATTCCGGGCCCTCAAGCAACCTCTGTCAGCACA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTTGCTGTTAGTTTACTaGTGGAGCTTAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLLLVY*WSLNLV
Trigger: CACCAGATTTAAGCTCCAGCAGTAAACTAACAGCAA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTGTTTAGTTGTCCTGTaGTCTTTCTGCTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQCLVVL*SFCLLL
Trigger: TAACAGCAAGCAGAAAGAGCACAGGACAACTAAACA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCTCCGTTCGGCAGTTaGGGTGTTGCCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWAPFGS*GVAAGG
Trigger: ACCACCAGCGGCAACACCGCAACTGCCGAACGGAGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCCTTTCAGCAGCAGCTaGTGCAGCCCGGAGAAGTCG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLPFSSS*CSPEKS
Trigger: CGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTGGAGCAGGGGCTGCTaGACACTAGGGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWWSRGC*TLGRPF
Trigger: GAAGGGCCTCCCTAGTGTGCAGCAGCCCCTGCTCCA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCGCCCAGAAGAATTCTaGAGCTCATCATACCGCCTC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLRPEEF*SSSYRL
Trigger: GAGGCGGTATGATGAGCTGCAGAATTCTTCTGGGCG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCTGAAGACTCTAAACTaGTGCTCGCTGTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLKTLN*CSLFVS
Trigger: TGACACAAACAGCGAGCAGCAGTTTAGAGTCTTCAG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAAAGGAATGAGGTTCTaGAGGGGTCGAGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNKGMRF*RGRVTG
Trigger: GCCTGTGACTCGACCCCTGCAGAACCTCATTCCTTT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAAAGGAATGAGGTTCTaGAGGGGTCGAGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLKGMRF*RGRVTG
Trigger: GCCTGTGACTCGACCCCTGCAGAACCTCATTCCTTT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAAAGGAATGAGGTTCTaGAGGGGTCGAGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFKGMRF*RGRVTG
Trigger: GCCTGTGACTCGACCCCTGCAGAACCTCATTCCTTT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGGCATCGTCACAGGCTaGGGGCTGAAAGGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGGIVTG*GLKGGK
Trigger: CTTGCCGCCTTTCAGCCCGCAGCCTGTGACGATGCC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGGCATCGTCACAGGCTaGGGGCTGAAAGGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWGIVTG*GLKGGK
Trigger: CTTGCCGCCTTTCAGCCCGCAGCCTGTGACGATGCC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGGCATCGTCACAGGCTaGGGGCTGAAAGGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQGIVTG*GLKGGK
Trigger: CTTGCCGCCTTTCAGCCCGCAGCCTGTGACGATGCC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCAGCTTCATTTTGCCTaGCCCTTTCTCAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLQLHFA*PFLSPR
Trigger: TCGTGGGCTGAGAAAGGGGCAGGCAAAATGAAGCTG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGGCCAGCTTCATTTTaGCTGCCCCTTTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQWPASF*LPLSQP
Trigger: GGGCTGAGAAAGGGGCAGGCAAAATGAAGCTGGCCA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTGCAACAAGTTCACATaGACACATCTAACACTTGAC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQCNKFT*THLTLD
Trigger: GTCAAGTGTTAGATGTGTGCATGTGAACTTGTTGCA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACATTCAGATCATACATaGGAGGGGTGCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQHSDHT*EGCPLG
Trigger: CCCCAAGGGGCACCCCTCGCATGTATGATCTGAATG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGCATGTCACTACCCTaGCCGCAAACATTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSMSLP*PQTFSG
Trigger: GCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATCAGGCACTCCAGCATaGACTGGATGGCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSGTPA*TGWLLQ
Trigger: CTGAAGCAGCCATCCAGTCCATGCTGGAGTGCCTGA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTTCCAAAGATGTCATTaGGCCACAGACTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNFQRCH*ATDFCT
Trigger: AGTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCAGTTTGGAACCCAGTaGGGACAGGAGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFQFGTQ*GQEAPV
Trigger: GACAGGAGCCTCCTGTCCCCACTGGGTTCCAAACTG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCATCCTCATGCACGGTaGTGTCCTCCTCCTCACGAA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCHPHAR*CPPPHE
Trigger: TTCGTGAGGAGGAGGACACCACCGTGCATGAGGATG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACATCCTCATGCACGGTaGTGTCCTCCTCCTCACGAA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQHPHAR*CPPPHE
Trigger: TTCGTGAGGAGGAGGACACCACCGTGCATGAGGATG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCTCGCCAGGGTAAACTaGTCCAGTGCCCGATTGCCT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLARVN*SSARLP
Trigger: AGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTATAAGCTGGTTGATGTaGCTGCGCCAGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFISWLM*LRQASS
Trigger: CGAGGAGGCCTGGCGCAGCCACATCAACCAGCTTAT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCAAGCCAAGAGAGTGTaGCCTCTTTCCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLQAKRV*PLSCCC
Trigger: ACAACAACAGGAAAGAGGCCACACTCTCTTGGCTTG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTGTGGGGCAGTGCTTaGGTAAGTTCTCCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLWGSA*VSSPAG
Trigger: TCCGGCAGGAGAACTTACCCAAGCACTGCCCCACAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGCGTTTCTTGTTCTCTaGTCTTCTTTCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNAFLVL*SSFQSF
Trigger: GAAGCTCTGGAAAGAAGACCAGAGAACAAGAAACGC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAAGGGTCCTGCCCACTaGCTGAATAAGATGAAAAGG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLKGPAH*LNKMKR
Trigger: CCTTTTCATCTTATTCAGCCAGTGGGCAGGACCCTT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCTCAGGGTACATCCTaGCCAGCTCACATGACAAGA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLAQGTS*PAHMTR
Trigger: TCTTGTCATGTGAGCTGGCCAGGATGTACCCTGAGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCTTGACTTCGTCCTCTaGGCTGCTGGGGCTCGACCC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLDFVL*AAGARP
Trigger: GGGTCGAGCCCCAGCAGCCCAGAGGACGAAGTCAAG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTTGACTTCGTCCTCTaGGCTGCTGGGGCTCGACCC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLDFVL*AAGARP
Trigger: GGGTCGAGCCCCAGCAGCCCAGAGGACGAAGTCAAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCACAATGCTGGACGATaGGGTTCACGGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCHNAGR*GSRALS
Trigger: AGACAGAGCCCGTGAACCCCATCGTCCAGCATTGTG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGGGTTGTCACAATGCTaGACGATGGGGTTCACGGGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFGLSQC*TMGFTG
Trigger: GCCCGTGAACCCCATCGTCCAGCATTGTGACAACCC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGGGTTGTCACAATGCTaGACGATGGGGTTCACGGGC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSGLSQC*TMGFTG
Trigger: GCCCGTGAACCCCATCGTCCAGCATTGTGACAACCC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTCTGGGAAATTTTCCTaGCCAGCAACCACTGTATTG +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNSGKFS*PATTVL
Trigger: CAATACAGTGGTTGCTGGCCAGGAAAATTTCCCAGA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGGCACCGGGGATGACTaGTCCTCTCTCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTGTGDD*SSLRKS
Trigger: TGACTTCCTGAGAGAGGACCAGTCATCCCCGGTGCC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTCCTGGGTCATCTGTaGGAGGTTTCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLLGHL*EVSTAA
Trigger: GGCAGCAGTGGAAACCTCCCACAGATGACCCAGGAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCGGTGTTGCCGCTGGTaGTTCCCGGGTTCATGTTTA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCRCCRW*FPGSCL
Trigger: TAAACATGAACCCGGGAACCACCAGCGGCAACACCG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGAATTCTGTCCAGTGTaGCACTTCGAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNEFCPV*HFEVGQ
Trigger: CTGACCCACCTCGAAGTGCCACACTGGACAGAATTC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGAATTCTGTCCAGTGTaGCACTTCGAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLEFCPV*HFEVGQ
Trigger: CTGACCCACCTCGAAGTGCCACACTGGACAGAATTC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGAATTCTGTCCAGTGTaGCACTTCGAGGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFEFCPV*HFEVGQ
Trigger: CTGACCCACCTCGAAGTGCCACACTGGACAGAATTC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGATGGTTTATGTGGGATaGGTCCGTGAGACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLMVYVG*VRETVL
Trigger: AAGGACAGTCTCACGGACCCATCCCACATAAACCAT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTGGCCAGCAGGTTGGTaGGATGGTTTATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLWPAGW*DGLCGM
Trigger: CATCCCACATAAACCATCCCACCAACCTGCTGGCCA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATACACAAGACATTCAGTaGAAACCCAATAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNTQDIQ*KPNSVG
Trigger: TCCCACGCTATTGGGTTTCCACTGAATGTCTTGTGT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATAAGGTAAAACAAGGCTaGCTGACCGAGAAACTACCA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNKVKQG*LTEKLP
Trigger: TGGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCAGCACTGCCAGTTTaGAACCCAGTGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFAALPV*NPVGTG
Trigger: TCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGACGTTGCCCCAGCATaGCAGCACTGCCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSDVAPA*QHCQFG
Trigger: TCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTCACAGGGCCATGCATaGCATGACCCCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSQGHA*HDPHGC
Trigger: GCACCCGTGGGGGTCATGCCATGCATGGCCCTGTGA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCACAGGGCCATGCATaGCATGACCCCCACGGGTGC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSQGHA*HDPHGC
Trigger: GCACCCGTGGGGGTCATGCCATGCATGGCCCTGTGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTGGGCTCTGCTGGCGTaGGGCTGCATCCTACACAAT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSWALLA*GCILHN
Trigger: ATTGTGTAGGATGCAGCCCCACGCCAGCAGAGCCCA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCCCGCAAACATTCAGTaGCTTCCCATCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNPANIQ*LPILLS
Trigger: GCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTGTCTGGGTCCACATTaGTGGGTAGCATGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSCLGPH*WVAWLA
Trigger: CGCCAACCATGCTACCCATCAATGTGGACCCAGACA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAGAAAGGGAGCTCATTaGGCTGATGACCTGATCAAA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLRKGAH*ADDLIK
Trigger: TTTGATCAGGTCATCAGCTCAATGAGCTCCCTTTCT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGCACAGGAGCCATCTaGGTCACACATAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSTGAI*VTHKLV
Trigger: AACCAGCTTATGTGTGACTCAGATGGCTCCTGTGCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAAGAGCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGCATCTGGGAAGAGCTaGCAAATTTGGATCCGATTC +
Preference number: 4 (lower is better)
Translates to: GRADKFGSDSPEVISKVTASGKS*QIWIRF
Trigger: GAATCGGATCCAAATTTGTCAGCTCTTCCCAGATGC...AGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp TGCAGTTCTAACACACTGAACTTGAGCTTGTCCAGAAGTCCACATGAAAGGAGAGTCCAGAAGTCCACATaGAAGGAGAGTCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: CSSNTLNLSLSRSPHERRVQKST*KESLGI
Trigger: GATGCCGAGACTCTCCTTTCATGTGGACTTCTGGAC...TCTCCTTTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGAACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCGGAGTCCCCTGGTTaGCAGGTAATTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSESPG*QVITPS
Trigger: AGATGGAGTAATTACCTGTCAACCAGGGGACTCCGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCCGACTGGAGCCGAGTaGAGGCATAAGGCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWPTGAE*RHKARH
Trigger: ATGCCTGGCCTTATGCCTTCACTCGGCTCCAGTCGG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAGAAGAGGGGGAGTGTaGGCTCAGGGTACATCCTGG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLRRGGV*AQGTSW
Trigger: CCAGGATGTACCCTGAGCTCACACTCCCCCTCTTCT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTTCCTCTCAGCCCGTaGGAAGCAGTCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTFPLSP*EAVTSP
Trigger: AGGTGACGTGACTGCTTCTCACGGGCTGAGAGGAAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTGGCCGTCATGTACATaGGGTTGTTCAGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCWPSCT*GCSGPV
Trigger: CACTGGTCCTGAACAACCTCATGTACATGACGGCCA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCTAGAGGTGGTTCCTaGGGCTGCTGCGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWARGGS*GCCGSL
Trigger: AAGGCTTCCGCAGCAGCCTCAGGAACCACCTCTAGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCTATTGCTGTATCTTaGCTCGAGGCGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFAIAVS*LEASVG
Trigger: GCCCACACTCGCCTCGAGTCAAGATACAGCAATAGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGCTATTGCTGTATCTTaGCTCGAGGCGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSAIAVS*LEASVG
Trigger: GCCCACACTCGCCTCGAGTCAAGATACAGCAATAGC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCAATACAGATACAACGTaGCGTAGAAAATTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVNTDTT*RRKLVS
Trigger: GCTCACTAATTTTCTACGTCACGTTGTATCTGTATT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTACCAGCATAGTGCCTTaGAGAGCTTGCGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFTSIVP*RACEGC
Trigger: ACAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGCTAGGAGTGCTTCCTaGCAGTTGGCGCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQARSAS*QLALLQ
Trigger: CTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCAGGCCGAGAAGACACTaGATGACGTTGCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSRPRRH*MTLPQH
Trigger: ATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTCCTTGCTGTCCCTTTaGCAAAGTGACCCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNSLLSL*QSDPAS
Trigger: AGAAGCAGGGTCACTTTGTCAAAGGGACAGCAAGGA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCTCCATCAGCTTGGTaGAGATCTCGGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFAPSAW*RSRSGS
Trigger: AGAGCCTGACCGAGATCTGCACCAAGCTGATGGAGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGAAAGATCATCCTCATaGACGGTGGTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCERSSS*TVVSSS
Trigger: GGAGGAGGACACCACCGTGCATGAGGATGATCTTTC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAAGAGCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGGTAAACTGGTCCAGTaGCCGATTGCCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GRADKFGSDSPEVISKVTGKLVQ*PIAFFF
Trigger: GAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACC...AGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGTAGAGAGATTCCAGTaGAACTCGAGCCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPVERFQ*NSSHLG
Trigger: CCCAAGATGGCTCGAGTTGCACTGGAATCTCTCTAC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCATTCCACCAACCACTaGAGATCCACATTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFHSTNH*RSTLWV
Trigger: CACCCACAATGTGGATCTGCAGTGGTTGGTGGAATG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCTATTGACCAGGACTaGGTTCCATTCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLAIDQD*VPFHQP
Trigger: TGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAAGATGAAAAGGTGGTaGCTCAGACTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPKMKRW*LRLCWG
Trigger: CCCCCAGCAAAGTCTGAGGCACCACCTTTTCATCTT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAAGATGAAAAGGTGGTaGCTCAGACTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLKMKRW*LRLCWG
Trigger: CCCCCAGCAAAGTCTGAGGCACCACCTTTTCATCTT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTACGGGCTCTGTCTGCTaGAGCTCAAAGAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCTGSVC*SSKRSS
Trigger: AGAGCTTCTCTTTGAGCTGCAGCAGACAGAGCCCGT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCCCATCTCTCGGGTCTaGAGGAGCACGGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLPISRV*RSTEAM
Trigger: CATTGCTTCCGTGCTCCTGCAGACCCGAGAGATGGG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACCAAAGTGGACCAAATaGCCTGGTCGTGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPPKWTK*PGREKL
Trigger: GAGTTTCTCACGACCAGGGCATTTGGTCCACTTTGG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCCAAAGTGGACCAAATaGCCTGGTCGTGAGAAACTC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLPKWTK*PGREKL
Trigger: GAGTTTCTCACGACCAGGGCATTTGGTCCACTTTGG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGCCCACTTCAGCTGTaGCTGGAGTTTCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCGPLQL*LEFLKL
Trigger: AAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGGCCCACTTCAGCTGTaGCTGGAGTTTCTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQGPLQL*LEFLKL
Trigger: AAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTACCAAGCTTGTCTGGTaGTCAAGCAGATCCAGATCC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLTKLVW*SSRSRS
Trigger: GGATCTGGATCTGCTTGAGCACCAGACAAGCTTGGT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTCATCCATGTTCTCCTaGTCTCGGGCACCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSSMFS*SRAPSS
Trigger: TGAGGACGGTGCCCGAGAGCAGGAGAACATGGATGA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATGATTAGGTCTGAGTaGTCCAGGATCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNMIRSE*SRIWLA
Trigger: AGCCAGCCAGATCCTGGAGCACTCAGACCTAATCAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNSSVAS*ICSVKC
Trigger: ACATTTGACCGAGCATATGCAACTCGCTACTGAAGA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACAGCTTCATTTTGCCTaGCCCTTTCTCAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQQLHFA*PFLSPR
Trigger: TCGTGGGCTGAGAAAGGGGCAGGCAAAATGAAGCTG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAATCACGGTGGTTCTCTaGTGGGTAAGAAGCCATGGT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPITVVL*WVRSHG
Trigger: ACCATGGCTTCTTACCCAGCAGAGAACCACCGTGAT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTCAGCTCCATCAGCTTaGTGCAGATCTCGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSAPSA*CRSRSG
Trigger: GCCTGACCGAGATCTGCACCAAGCTGATGGAGCTGA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAATGTAGGAGCCTCATaGGAACAGGGACCACATCTG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLNVGAS*EQGPHL
Trigger: CAGATGTGGTCCCTGTTCCCATGAGGCTCCTACATT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCGTGCCAGAAGCAGGTaGAACCGGAGGCTTGATGTA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFRARSR*NRRLDV
Trigger: TACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCTCGCCAGGGTAAACTaGTCCAGTGCCCGATTGCCT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLLARVN*SSARLP
Trigger: AGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAGAGTCACACATAAGCTaGTTGATGTGGCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: RSPHERRVSASTKSVGHSESHIS*LMWLRQ
Trigger: CTGGCGCAGCCACATCAACCAGCTTATGTGTGACTC...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGAGTCACACATAAGCTaGTTGATGTGGCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCESHIS*LMWLRQ
Trigger: CTGGCGCAGCCACATCAACCAGCTTATGTGTGACTC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAAGAGCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTTTCTTCGGAGTCCCCTaGTTGACAGGTAATTACTCC +
Preference number: 4 (lower is better)
Translates to: GRADKFGSDSPEVISKVTFFGVP*LTGNYS
Trigger: GGAGTAATTACCTGTCAACCAGGGGACTCCGAAGAA...AGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAAGAAAGTTCCAGCGTaGTGTCATACAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLKKVPA*CHTGFP
Trigger: TGGAAAGCCTGTATGACACCACGCTGGAACTTTCTT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTTGCGTGTGGCCACCTaGAAACTGCAGAGTAAAACC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNLRVAT*KLQSKT
Trigger: GGTTTTACTCTGCAGTTTCCAGGTGGCCACACGCAA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATTGCGTGTGGCCACCTaGAAACTGCAGAGTAAAACC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLRVAT*KLQSKT
Trigger: GGTTTTACTCTGCAGTTTCCAGGTGGCCACACGCAA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCGGACAGTTTGCGTGTaGCCACCTGGAAACTGCAGA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFRTVCV*PPGNCR
Trigger: TCTGCAGTTTCCAGGTGGCCACACGCAAACTGTCCG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCTGTGGGGCAGTGCTTaGGTAAGTTCTCCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLLWGSA*VSSPAG
Trigger: TCCGGCAGGAGAACTTACCCAAGCACTGCCCCACAG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCAGAACTCCCACCGATaGGGTGCCTATGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSQNSHR*GAYGLV
Trigger: AACAAGGCCATAGGCACCCCATCGGTGGGAGTTCTG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATGCCTCAGACTTTGCTaGGGGAAGAGAAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPCLRLC*GKRNLR
Trigger: CCGAAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTCAGGACCAGTGACGTaGCTTCTGGAGAGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGSGPVT*LLESPS
Trigger: GCTGGGGCTCTCCAGAAGCCACGTCACTGGTCCTGA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCACAATGCTGGACGATaGGGTTCACGGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSHNAGR*GSRALS
Trigger: AGACAGAGCCCGTGAACCCCATCGTCCAGCATTGTG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGTTCTCCTCAGCATCTaGGAAATTTTCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPVLLSI*EIFLAS
Trigger: GCTGGCCAGGAAAATTTCCCAGATGCTGAGGAGAAC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTATTGCACCTGTGGAGTaGCCCCCGGGGAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGIAPVE*PPGSDG
Trigger: ACCATCACTCCCCGGGGGCCACTCCACAGGTGCAAT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCAACTTCACTCAACTaGTGCTCCAGATGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNATSLN*CSRWKP
Trigger: AGGCTTCCATCTGGAGCACCAGTTGAGTGAAGTTGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCAACTTCACTCAACTaGTGCTCCAGATGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLATSLN*CSRWKP
Trigger: AGGCTTCCATCTGGAGCACCAGTTGAGTGAAGTTGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGTGGGATGGTTTATGTaGGATGGGTCCGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCVGWFM*DGSVRL
Trigger: CAGTCTCACGGACCCATCCCACATAAACCATCCCAC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAGCAGGTTGGTGGGATaGTTTATGTGGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCSRLVG*FMWDGS
Trigger: GGACCCATCCCACATAAACCATCCCACCAACCTGCT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCCTTACAGAACTGATTaGGATTTTCAAAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPPYRTD*DFQNAE
Trigger: TTCAGCATTTTGAAAATCCCAATCAGTTCTGTAAGG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGAGAGGTCACTGTGCTaGTATGAAGGTAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLERSLC*YEGKTR
Trigger: CCTTGTTTTACCTTCATACCAGCACAGTGACCTCTC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCTGGAACAAGGACGTTaGAGTTGGAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLEQGR*SWSLRK
Trigger: CTTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCAGCACTGCCAGTTTaGAACCCAGTGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLAALPV*NPVGTG
Trigger: TCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCACACAGCATGATGAGTaGAGTCTGTCCAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFTQHDE*SLSRTF
Trigger: GAACGTCCTGGACAGACTCCACTCATCATGCTGTGT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTACACAGCATGATGAGTaGAGTCTGTCCAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLTQHDE*SLSRTF
Trigger: GAACGTCCTGGACAGACTCCACTCATCATGCTGTGT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTTGATTACAGAGAATTaGTTGAAGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPLITEN*LKLTVL
Trigger: CAAAACTGTGAGCTTCAACCAATTCTCTGTAATCAA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATTCTCCCTGTGTTCCTaGGGGATAGGTGTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQFSLCS*GIGVGD
Trigger: GTCACCAACACCTATCCCCCAGGAACACAGGGAGAA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCTGTTCTTTCTACTGTaGCTCCCAACAAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLFFLL*LPTKLS
Trigger: AGAGAGTTTTGTTGGGAGCCACAGTAGAAAGAACAG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGAGAAGCTGGAAATATaGATGGTCTCTTCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLEKLEI*MVSSSG
Trigger: ACCCGAAGAAGAGACCATCCATATTTCCAGCTTCTC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGACTTCTGCACTCCCTaGTCTGCCGCAAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLDFCTP*SAAKLC
Trigger: GCAAAGCTTTGCGGCAGATCAGGGAGTGCAGAAGTC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCACGTGTAAGCTATTaGTGTAAGCAGCCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQARVSY*CKQPGG
Trigger: ACCTCCAGGCTGCTTACATCAATAGCTTACACGTGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAAGCACAGGAGCCATCTaGGTCACACATAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: RSPHERRVSASTKSVGHSSTGAI*VTHKLV
Trigger: AACCAGCTTATGTGTGACTCAGATGGCTCCTGTGCT...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAAGGAGGAGAACACATaGAATGTATACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLKEENT*NVYTAQ
Trigger: CTGTGCTGTGTATACATTTCATGTGTTCTCCTCCTT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGCATCTGGGAAGAGCTaGCAAATTTGGATCCGATTC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFASGKS*QIWIRF
Trigger: GAATCGGATCCAAATTTGTCAGCTCTTCCCAGATGC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGCATCTGGGAAGAGCTaGCAAATTTGGATCCGATTC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPASGKS*QIWIRF
Trigger: GAATCGGATCCAAATTTGTCAGCTCTTCCCAGATGC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGTCCAGAAGTCCACATaGAAGGAGAGTCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFVQKST*KESLGI
Trigger: GATGCCGAGACTCTCCTTTCATGTGGACTTCTGGAC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGCAAGCTATCAGCTATaGCCAAGAATGCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLASYQL*PRMPVN
Trigger: GTTTACGGGCATTCTTGGTCATAGCTGATAGCTTGC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTCAGGAACTGCAAGGTaGTCCTCAGGTTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSGTAR*SSGCCS
Trigger: GGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAGCTCTTCCATGGTTTaGATGGTGTTGTTACGGCAC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSSSMV*MVLLRH
Trigger: GTGCCGTAACAACACCATTCAAACCATGGAAGAGCT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCTATTGCTGTATCTTaGCTCGAGGCGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLAIAVS*LEASVG
Trigger: GCCCACACTCGCCTCGAGTCAAGATACAGCAATAGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTCTTCTCGTACACTGTaGTCCACCACCATTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSSRTL*STTISV
Trigger: GACTGAAATGGTGGTGGATCACAGTGTACGAGAAGA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTCTTCTCGTACACTGTaGTCCACCACCATTTCAGTC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLSSRTL*STTISV
Trigger: GACTGAAATGGTGGTGGATCACAGTGTACGAGAAGA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGTTGGGTACAAGCCTaGATTCTGTCCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQCWVQA*ILSSVA
Trigger: TGCCACACTGGACAGAATTCAGGCTTGTACCCAACA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTGTGGGATGGGTCCGTaGGACTGTCCTTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWCGMGP*DCPSRR
Trigger: CCTCCTTGAAGGACAGTCTCACGGACCCATCCCACA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTATCGACAGACCACATTaGCCCACGTGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGIDRPH*PTWHSP
Trigger: GGGACTGTGCCACGTGGGTCAATGTGGTCTGTCGAT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGATCGACAGACCACATTaGCCCACGTGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWIDRPH*PTWHSP
Trigger: GGGACTGTGCCACGTGGGTCAATGTGGTCTGTCGAT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCTGGTGTTAAAGGAATaGGGTTCTGCAGGGGTCGAG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLVLKE*GSAGVE
Trigger: CTCGACCCCTGCAGAACCTCATTCCTTTAACACCAG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTATGGAGCTAACTTCGTaGACCTGGCCGATGAGCTTA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCMELTS*TWPMSL
Trigger: TAAGCTCATCGGCCAGGTGCACGAAGTTAGCTCCAT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTCTGCCGCAAAGCTTTaGCGAGTTCGTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLSAAKL*RVRCSS
Trigger: TGAAGAACAACGAACTCGGCAAAGCTTTGCGGCAGA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCTCCATCAGCTTGGTaGAGATCTCGGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLAPSAW*RSRSGS
Trigger: AGAGCCTGACCGAGATCTGCACCAAGCTGATGGAGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGGTAACTCTGGGCCCTaGGGATCATGTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWGNSGP*GSCPGS
Trigger: AGATCCGGGACATGATCCGCAGGGCCCAGAGTTACC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTTTCTCCCTGTGCGTaGCAGAAGCAGGTGGAACCG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLSPCA*QKQVEP
Trigger: CGGTTCCACCTGCTTCTGGCACGCACAGGGAGAAAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGAAAGATCATCCTCATaGACGGTGGTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFERSSS*TVVSSS
Trigger: GGAGGAGGACACCACCGTGCATGAGGATGATCTTTC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGTAAACTGGTCCAGTaGCCGATTGCCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGKLVQ*PIAFFF
Trigger: GAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGTATCCAAATATTCTTaGAGTTCTAACACACTGAAC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCVSKYS*SSNTLN
Trigger: GTTCAGTGTGTTAGAACTGCAAGAATATTTGGATAC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGTATCCAAATATTCTTaGAGTTCTAACACACTGAAC +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQVSKYS*SSNTLN
Trigger: GTTCAGTGTGTTAGAACTGCAAGAATATTTGGATAC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGACCACATATGGGTTCTaGTCTTTGTGCCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLTTYGF*SLCRNS
Trigger: AGAATTACGGCACAAAGAGCAGAACCCATATGTGGT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCCCCATCTTTCTGCTaGAAGCTATCAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSPSFC*KLSAMT
Trigger: GGTCATAGCTGATAGCTTGCAGCAGAAAGATGGGGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGTTCCCCATCTTTCTaGTGCAAGCTATCAGCTATG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGSPSF*CKLSAM
Trigger: CATAGCTGATAGCTTGCAGCAGAAAGATGGGGAACC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTGGGTAAGTTCTCCTaGCGGAGGAAGCTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLGKFS*RRKLKR
Trigger: CCTCTTCAGCTTCCTCCGGCAGGAGAACTTACCCAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGGGCTGTGGGGCAGTaGTTGGGTAAGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTRAVGQ*LGKFSC
Trigger: GCAGGAGAACTTACCCAAGCACTGCCCCACAGCCCT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCATAGTTGTCTCCGCTaGCGGCAGTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFHSCLR*RQCWFS
Trigger: AGAAAACCAGCACTGCCGGCAGCGGAGACAACTATG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCAAGTTGGCCACCATTaGACTAAAATGTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNQVGHH*TKMCPD
Trigger: ATCCGGGCACATTTTAGTGCAATGGTGGCCAACTTG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCAAGTTGGCCACCATTaGACTAAAATGTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFQVGHH*TKMCPD
Trigger: ATCCGGGCACATTTTAGTGCAATGGTGGCCAACTTG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTGGTGCCTCAGACTTTaGTGGGGGAAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLWCLRL*WGKRNL
Trigger: AAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATGGTGCCTCAGACTTTaGTGGGGGAAGAGAAATCTT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPWCLRL*WGKRNL
Trigger: AAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGTAGCATCGGTCAATTaGCCAGTTAAAAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQVASVN*PVKKIY
Trigger: ATAAATCTTTTTAACTGGGCAATTGACCGATGCTAC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGGCTAATCAGGAACTaGAAGGTGATCCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRLIRN*KVILRL
Trigger: CAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAGGCTAATCAGGAACTaGAAGGTGATCCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPRLIRN*KVILRL
Trigger: CAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGGCGGGTTGTCACAATaGTGGACGATGGGGTTCACG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTGGLSQ*WTMGFT
Trigger: CGTGAACCCCATCGTCCAGCATTGTGACAACCCGCC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGGCGGGTTGTCACAATaGTGGACGATGGGGTTCACG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWGGLSQ*WTMGFT
Trigger: CGTGAACCCCATCGTCCAGCATTGTGACAACCCGCC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATCCTCCAGAGCTATTaGTGTATCTTGACTCGAGGC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNILQSY*CILTRG
Trigger: GCCTCGAGTCAAGATACAGCAATAGCTCTGGAGGAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGGTAAGGGCTGCGGCTaGTTGGTCTCTGTAATAGTC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFGKGCG*LVSVIV
Trigger: GACTATTACAGAGACCAAGCAGCCGCAGCCCTTACC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGGCATCGGTAAGGGCTaGGGCTGCTTGGTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQGIGKG*GCLVSV
Trigger: TACAGAGACCAAGCAGCCGCAGCCCTTACCGATGCC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGGCATCGGTAAGGGCTaGGGCTGCTTGGTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWGIGKG*GCLVSV
Trigger: TACAGAGACCAAGCAGCCGCAGCCCTTACCGATGCC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATAATGGAAATTGCTGTTaGAAGAGAGGGCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNNGNCC*KRGQSR
Trigger: TCTTGATTGCCCTCTCTTGCAACAGCAATTTCCATT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACCCATCTCTCGGGTCTaGAGGAGCACGGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTPISRV*RSTEAM
Trigger: CATTGCTTCCGTGCTCCTGCAGACCCGAGAGATGGG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTATGTGCCAGTAGTCTaGTCAACAGCCTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLYVPVV*STALRP
Trigger: TGGCCTTAAGGCTGTTGAGCAGACTACTGGCACATA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTTCTCCAGCAGCTCTaGCAGGTAGGTAACCATATT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLLQQL*QVGNHI
Trigger: AATATGGTTACCTACCTGGCAGAGCTGCTGGAGAAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCTTCTCCAGCAGCTCTaGCAGGTAGGTAACCATATT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLLQQL*QVGNHI
Trigger: AATATGGTTACCTACCTGGCAGAGCTGCTGGAGAAG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCGCTCCTCCAGAATCTaGATATCACACTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRSSRI*ISHLSR
Trigger: CCTGGATAAGTGTGATATGCAGATTCTGGAGGAGCG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCGCTCCTCCAGAATCTaGATATCACACTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLRSSRI*ISHLSR
Trigger: CCTGGATAAGTGTGATATGCAGATTCTGGAGGAGCG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAAGGAATGAGGTTCTaGAGGGGTCGAGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKGMRF*RGRVTG
Trigger: GCCTGTGACTCGACCCCTGCAGAACCTCATTCCTTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCTTTGGCAACCCACATaGAAAACTTCATGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLWQPT*KTSCVP
Trigger: GGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGCGCCTGTCTGGATTaGTTTATTCTGCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSACLD*FILQVD
Trigger: ATCCACCTGCAGAATAAAGCAATCCAGACAGGCGCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGCATGTCACTACCCTaGCCGCAAACATTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSMSLP*PQTFSG
Trigger: GCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGAGGACATATTCTCCTaGTTTACTGTCTGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPEDIFS*FTVWVH
Trigger: GTGGACCCAGACAGTAAACCAGGAGAATATGTCCTC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGAGTCACACATAAGCTaGTTGATGTGGCTGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTESHIS*LMWLRQ
Trigger: CTGGCGCAGCCACATCAACCAGCTTATGTGTGACTC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCAGGAGGTGAGCATCTaGGAAGAGCTGACAAATTTG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNQEVSI*EELTNL
Trigger: CAAATTTGTCAGCTCTTCCCAGATGCTCACCTCCTG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTTCTTCGGAGTCCCCTaGTTGACAGGTAATTACTCC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFFFGVP*LTGNYS
Trigger: GGAGTAATTACCTGTCAACCAGGGGACTCCGAAGAA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCATATTGCCAGTGTTaGGACCAAGGTACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLAYCQC*DQGTLL
Trigger: AAGAAGGGTACCTTGGTCCCAACACTGGCAATATGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAAGGGTCCTGCCCACTaGCTGAATAAGATGAAAAGG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLKGPAH*LNKMKR
Trigger: CCTTTTCATCTTATTCAGCCAGTGGGCAGGACCCTT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAAGGGTCCTGCCCACTaGCTGAATAAGATGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLKGPAH*LNKMKR
Trigger: CCTTTTCATCTTATTCAGCCAGTGGGCAGGACCCTT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGCTCAGGGTACATCCTaGCCAGCTCACATGACAAGA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTAQGTS*PAHMTR
Trigger: TCTTGTCATGTGAGCTGGCCAGGATGTACCCTGAGC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGTTGTGGGGAATCGCTaGCTTACCTCTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFVVGNR*LTSEKR
Trigger: CCTCTTCTCAGAGGTAAGCCAGCGATTCCCCACAAC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCACAATGCTGGACGATaGGGTTCACGGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLHNAGR*GSRALS
Trigger: AGACAGAGCCCGTGAACCCCATCGTCCAGCATTGTG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGGGTTGTCACAATGCTaGACGATGGGGTTCACGGGC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQGLSQC*TMGFTG
Trigger: GCCCGTGAACCCCATCGTCCAGCATTGTGACAACCC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGACTCGAGGCGAGTGTaGGCTCTGATGACATTACTA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCDSRRV*ALMTLL
Trigger: TAGTAATGTCATCAGAGCCCACACTCGCCTCGAGTC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTACATCTTCTACCTCCTaGGTCATCTGTGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLTSSTS*VICGRF
Trigger: AAACCTCCCACAGATGACCCAGGAGGTAGAAGATGT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGCAACTTCACTCAACTaGTGCTCCAGATGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCATSLN*CSRWKP
Trigger: AGGCTTCCATCTGGAGCACCAGTTGAGTGAAGTTGC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCGGTGTTGCCGCTGGTaGTTCCCGGGTTCATGTTTA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLRCCRW*FPGSCL
Trigger: TAAACATGAACCCGGGAACCACCAGCGGCAACACCG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATTGCGGTGTTGCCGCTaGTGGTTCCCGGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLRCCR*WFPGSC
Trigger: ACATGAACCCGGGAACCACCAGCGGCAACACCGCAA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTTGCGGTGTTGCCGCTaGTGGTTCCCGGGTTCATGT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLRCCR*WFPGSC
Trigger: ACATGAACCCGGGAACCACCAGCGGCAACACCGCAA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAGGAGGATGAGCTTCTaGTTTTTGAGGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLRRMSF*FLRRGL
Trigger: AAGGCCTCTCCTCAAAAACCAGAAGCTCATCCTCCT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGTGGGATGGTTTATGTaGGATGGGTCCGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSVGWFM*DGSVRL
Trigger: CAGTCTCACGGACCCATCCCACATAAACCATCCCAC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTGGCCAGCAGGTTGGTaGGATGGTTTATGTGGGATG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFWPAGW*DGLCGM
Trigger: CATCCCACATAAACCATCCCACCAACCTGCTGGCCA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGGGATGCATCCACCATaGATATTTTGGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLGMHPP*IFWTLV
Trigger: CACCAGTGTCCAAAATATCCATGGTGGATGCATCCC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGGGATGCATCCACCATaGATATTTTGGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLGMHPP*IFWTLV
Trigger: CACCAGTGTCCAAAATATCCATGGTGGATGCATCCC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGAAACCCAATAGCGTaGGATGCATCCACCATGGAT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCGNPIA*DASTMD
Trigger: ATCCATGGTGGATGCATCCCACGCTATTGGGTTTCC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAAGATTTGAAAGTTTaGGGTTCTTCTCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCQDLKV*GSSLLN
Trigger: GTTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTG...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACAAGGACGTTGGAGTTaGAGCCTGAGGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTQGRWS*SLRKWK
Trigger: CTTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCCTTTTCCAGCTCACTaGAACAAGGACGTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLPFPAH*NKDVGV
Trigger: AACTCCAACGTCCTTGTTCCAGTGAGCTGGAAAAGG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCCTTTTCCAGCTCACTaGAACAAGGACGTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLPFPAH*NKDVGV
Trigger: AACTCCAACGTCCTTGTTCCAGTGAGCTGGAAAAGG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGTGCTTCCTGACAGTTaGCGCTCCTCCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLVLPDS*RSSRIC
Trigger: GCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCAC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGAAAGGCGGCAAGGATaGCTGAGAAGAAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQERRQG*LRRRAR
Trigger: CCTCGCCCTTCTTCTCAGCCATCCTTGCCGCCTTTC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGAAAGGCGGCAAGGATaGCTGAGAAGAAGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWERRQG*LRRRAR
Trigger: CCTCGCCCTTCTTCTCAGCCATCCTTGCCGCCTTTC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGACGTTGCCCCAGCATaGCAGCACTGCCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTDVAPA*QHCQFG
Trigger: TCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFQCSRL*YATEVT
Trigger: AGTGACTTCCGTTGCATACCAAAGCCGACTACACTG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTTGATTACAGAGAATTaGTTGAAGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLITEN*LKLTVL
Trigger: CAAAACTGTGAGCTTCAACCAATTCTCTGTAATCAA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTCTCCCTGTGTTCCTaGGGGATAGGTGTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTFSLCS*GIGVGD
Trigger: GTCACCAACACCTATCCCCCAGGAACACAGGGAGAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATCTACCCTTTCCTTTaGTACTTCTACTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCIYPFL*YFYFFV
Trigger: TACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGAACAAAGAAATATCCTaGGTCATGATAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQNKEIS*VMIGIQ
Trigger: TTGGATACCTATCATGACCCAGGATATTTCTTTGTT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTGCTTCTTATTTGCTaGACGCTGATCTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLLLIC*TLISLQ
Trigger: CTGCAGGGAGATCAGCGTCCAGCAAATAAGAAGCAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGTGCACCTGGCCGATaGGCTTACAGTAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQRAPGR*AYSRTE
Trigger: TTCAGTCCTACTGTAAGCTCATCGGCCAGGTGCACG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTGTCTGGGTCCACATTaGTGGGTAGCATGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGCLGPH*WVAWLA
Trigger: CGCCAACCATGCTACCCATCAATGTGGACCCAGACA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTATCTTGCGTTCAGCCTaGGTGGTGAAGTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLILRSA*VVKLTN
Trigger: ATTTGTCAACTTCACCACTCAGGCTGAACGCAAGAT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATTGAGCTGATGACCTaGTCAAATTGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNIELMT*SNWGSS
Trigger: AGAAGACCCCCAATTTGATCAGGTCATCAGCTCAAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCATTGAGCTGATGACCTaGTCAAATTGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFIELMT*SNWGSS
Trigger: AGAAGACCCCCAATTTGATCAGGTCATCAGCTCAAT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTGGTCTGTATTCATGTaGTTCATCCTCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLWSVFM*FILNAI
Trigger: AATGGCATTGAGGATGAATCACATGAATACAGACCA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAACAGCTTCAGCCTTTaGACCCTCAGAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCNSFSL*TLRNLQ
Trigger: CTGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATAATTACTCCATCTCTTaGTCCCCCTGCAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: SRSPHERRVSASTKSVGHNYSIS*SPCKCC
Trigger: GCAACATTTGCAGGGGGATCAAGAGATGGAGTAATT...ATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAATTACTCCATCTCTTaGTCCCCCTGCAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPNYSIS*SPCKCC
Trigger: GCAACATTTGCAGGGGGATCAAGAGATGGAGTAATT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAATTACTCCATCTCTTaGTCCCCCTGCAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLNYSIS*SPCKCC
Trigger: GCAACATTTGCAGGGGGATCAAGAGATGGAGTAATT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTCGGAGTCCCCTGGTTaGCAGGTAATTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSESPG*QVITPS
Trigger: AGATGGAGTAATTACCTGTCAACCAGGGGACTCCGA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCATTCCTGCATAAACTaGAGAGAGGCCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLHSCIN*REASKS
Trigger: GGATTTTGAGGCCTCTCTTCAGTTTATGCAGGAATG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGTTATAAGTCGGCTCTaGGTAGCTGTGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFVISRL*VAVLLS
Trigger: TGAAAGCAACACAGCTACTCAGAGCCGACTTATAAC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGATCCACATTGTGGGTaGGTGGTAATGTTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLDPHCG*VVMLLN
Trigger: ATTCAGCAACATTACCACTCACCCACAATGTGGATC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTTCAAGGATCTGCATaGGCTGCATGGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLQGSA*AAWRFH
Trigger: ATGAAATCTCCATGCAGCTCATGCAGATCCTTGAAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACTTCAAGGATCTGCATaGGCTGCATGGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLQGSA*AAWRFH
Trigger: ATGAAATCTCCATGCAGCTCATGCAGATCCTTGAAG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCTTCAAGGATCTGCATaGGCTGCATGGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNLQGSA*AAWRFH
Trigger: ATGAAATCTCCATGCAGCTCATGCAGATCCTTGAAG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCTCAGCGACTTTCTTTaGGTATACAAAAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLLSDFL*VYKKLC
Trigger: GCAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATTTCCTCTCAGCCCGTaGGAAGCAGTCACGTCACCT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTFPLSP*EAVTSP
Trigger: AGGTGACGTGACTGCTTCTCACGGGCTGAGAGGAAA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGCTATTGCTGTATCTTaGCTCGAGGCGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTAIAVS*LEASVG
Trigger: GCCCACACTCGCCTCGAGTCAAGATACAGCAATAGC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAGTAATAATGGTAGATaGAGCGCCCAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSNNGR*SAQSSR
Trigger: ACGAGAAGACTGGGCGCTTCATCTACCATTATTACT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGTAATAATGGTAGATaGAGCGCCCAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSNNGR*SAQSSR
Trigger: ACGAGAAGACTGGGCGCTTCATCTACCATTATTACT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTGACAGAGGTTGCTTaGGGGCCCGGAATATCTGGA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLTEVA*GPGISG
Trigger: TCCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCAGAGGATCGGTCGATaGCACCAAACTTCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLQRIGR*HQTSWA
Trigger: TGCCCAAGAAGTTTGGTGTCATCGACCGATCCTCTG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACCATCAAGGCCACTGTaGCCCAGAATATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQPSRPL*PRIWWP
Trigger: TGGCCACCATATTCTGGGTCACAGTGGCCTTGATGG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTCTTCTAAACAAACCTaGGCAATCCTTTCGGCTATA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLSSKQT*AILSAI
Trigger: TATAGCCGAAAGGATTGCTCAGGTTTGTTTAGAAGA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCAGCATATGCTTCATaGAGGTATCGACAGACCACA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSAYAS*RYRQTT
Trigger: TGTGGTCTGTCGATACCTTCATGAAGCATATGCTGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTCAGCATATGCTTCATaGAGGTATCGACAGACCACA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLSAYAS*RYRQTT
Trigger: TGTGGTCTGTCGATACCTTCATGAAGCATATGCTGA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAAAGGTCCATGTAGCTaGGAAGACTGTAGATCACCT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPKGPCS*EDCRSP
Trigger: AGGTGATCTACAGTCTTCTCAGCTACATGGACCTTT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCATACCGCCTCCCGATaGTTGGAGTCTCCGAAATAT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFHTASR*LESPKY
Trigger: ATATTTCGGAGACTCCAATCATCGGGAGGCGGTATG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACATACCGCCTCCCGATaGTTGGAGTCTCCGAAATAT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTHTASR*LESPKY
Trigger: ATATTTCGGAGACTCCAATCATCGGGAGGCGGTATG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACAGGCTGTCAGCTTTTaGCCATCTTACAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPQAVSF*PSYSFQ
Trigger: CTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCAGGCTGTCAGCTTTTaGCCATCTTACAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLQAVSF*PSYSFQ
Trigger: CTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAGTGCTAGAAAACAGTaGGACACAAGGAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSARKQ*DTRRHL
Trigger: AAGATGCCTCCTTGTGTCTCACTGTTTTCTAGCACT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGAGGAAGACCCCACCTaGACTGGGATCGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWEEDPT*TGIGFL
Trigger: AAGAAAGCCGATCCCAGTTCAGGTGGGGTCTTCCTC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTGCACTCCCTGATCTaGCGCAAAGCTTTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLHSLI*RKALPS
Trigger: ACTCGGCAAAGCTTTGCGGCAGATCAGGGAGTGCAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCTCCATCAGCTTGGTaGAGATCTCGGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWAPSAW*RSRSGS
Trigger: AGAGCCTGACCGAGATCTGCACCAAGCTGATGGAGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGCTGCATTCAAAAGCTaGTGGGAGTTCATTGATGGA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFAAFKS*WEFIDG
Trigger: TCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATATTCTTGCAGTTCTAACACACTGAACTTGAGCTTGTCCAGAAGTCCACATGGTCCAGTGCCCGATTaGCTTTTTCTTCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KYSCSSNTLNLSLSRSPHGPVPD*LFLPPQ
Trigger: CTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACC...ATGTGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGAACTGCAAGAATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGGTCCAGTGCCCGATTaGCTTTTTCTTCCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGGPVPD*LFLPPQ
Trigger: CTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGGTAAACTGGTCCAGTaGCCGATTGCCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQGKLVQ*PIAFFF
Trigger: GAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGGTCTGCCACAATATaGATATTGCCAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRSATI*ILPVLG
Trigger: TCCCAACACTGGCAATATGCATATTGTGGCAGACCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCACTCCAATGACTTCTaGATACAGGTCTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFHSNDF*IQVCHN
Trigger: ATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTACAAGGCCAAGGAATaGTTCTTTCGAGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLYKAKE*FFREES
Trigger: ACTTTCTTCTCGAAAGAAGCATTCCTTGGCCTTGTA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTGGGTTGAGACTGAATaGTTTTGCTGGTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLWVETE*FCWFSH
Trigger: GTGGGAAAACCAGCAAAAGCATTCAGTCTCAACCCA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGGTTCCCCATCTTTCTaGTGCAAGCTATCAGCTATG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQGSPSF*CKLSAM
Trigger: CATAGCTGATAGCTTGCAGCAGAAAGATGGGGAACC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGGCCACCTGGAAACTaGAGAGTAAAACCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQWPPGN*RVKPEQ
Trigger: TTGCTCTGGTTTTACTCTGCAGTTTCCAGGTGGCCA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTCCCACCGATGGGGTaGCTATGGCCTTGTTATCGT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLPPMG*LWPCYR
Trigger: ACGATAACAAGGCCATAGGCACCCCATCGGTGGGAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTCCCACCGATGGGGTaGCTATGGCCTTGTTATCGT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLPPMG*LWPCYR
Trigger: ACGATAACAAGGCCATAGGCACCCCATCGGTGGGAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAGATGAAAAGGTGGTaGCTCAGACTTTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKMKRW*LRLCWG
Trigger: CCCCCAGCAAAGTCTGAGGCACCACCTTTTCATCTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTTTGAAGCAGCCAGATaGAAGTTGGTAGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLFEAAR*KLVGTC
Trigger: ACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGTATACAAAAAGCTTTaGTTCAAGGATCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNVYKKL*FKDLHE
Trigger: CTCATGCAGATCCTTGAAGCAAAGCTTTTTGTATAC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATACTTCCCGGTCTTTaGTCAGCGACTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNILPGL*SATFFE
Trigger: CTCAAAGAAAGTCGCTGAGCAAAGACCGGGAAGTAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGTCCTGTGCTCTTTCTaGTTGCTGTTAGTTTACTGC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPVLCSF*LLLVYC
Trigger: GCAGTAAACTAACAGCAAGCAGAAAGAGCACAGGAC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGTCCTGTGCTCTTTCTaGTTGCTGTTAGTTTACTGC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFVLCSF*LLLVYC
Trigger: GCAGTAAACTAACAGCAAGCAGAAAGAGCACAGGAC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCCCAATAGCGTGGGATaGATCCACCATGGATATTTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLPNSVG*IHHGYF
Trigger: AAAATATCCATGGTGGATGCATCCCACGCTATTGGG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGGTAATGTCAGCATATaGTTCATGAAGGTATCGACA +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLGNVSI*FMKVST
Trigger: TGTCGATACCTTCATGAAGCATATGCTGACATTACC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCGCCCAGAAGAATTCTaGAGCTCATCATACCGCCTC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLRPEEF*SSSYRL
Trigger: GAGGCGGTATGATGAGCTGCAGAATTCTTCTGGGCG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTCATCCATGTTCTCCTaGTCTCGGGCACCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSSMFS*SRAPSS
Trigger: TGAGGACGGTGCCCGAGAGCAGGAGAACATGGATGA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTCATCCATGTTCTCCTaGTCTCGGGCACCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGSSMFS*SRAPSS
Trigger: TGAGGACGGTGCCCGAGAGCAGGAGAACATGGATGA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAAGACTCTAAACTGCTaGTCGCTGTTTGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNKTLNC*SLFVSS
Trigger: GGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAAGACTCTAAACTGCTaGTCGCTGTTTGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLKTLNC*SLFVSS
Trigger: GGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTCGGAGTCCTCATGGTaGATTTTATTCAGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLSESSW*ILFRLG
Trigger: TCCTAGCCTGAATAAAATGCACCATGAGGACTCCGA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATCGGAGTCCTCATGGTaGATTTTATTCAGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSESSW*ILFRLG
Trigger: TCCTAGCCTGAATAAAATGCACCATGAGGACTCCGA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTGGCCAGCTTCATTTTaGCTGCCCCTTTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWWPASF*LPLSQP
Trigger: GGGCTGAGAAAGGGGCAGGCAAAATGAAGCTGGCCA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATGGCCAGCTTCATTTTaGCTGCCCCTTTCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQWPASF*LPLSQP
Trigger: GGGCTGAGAAAGGGGCAGGCAAAATGAAGCTGGCCA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCTGGACCATTTTTGGTaGAAAGAGATCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLDHFW*KEIQGF
Trigger: AAAGCCCTGGATCTCTTTGCACCAAAAATGGTCCAG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTGCAACAAGTTCACATaGACACATCTAACACTTGAC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLCNKFT*THLTLD
Trigger: GTCAAGTGTTAGATGTGTGCATGTGAACTTGTTGCA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCATACATGCGAGGGGTaGCCCTTGGGGTTATTACTT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSHTCEG*PLGLLL
Trigger: AAGTAATAACCCCAAGGGGCACCCCTCGCATGTATG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCATTCAGATCATACATaGGAGGGGTGCCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWHSDHT*EGCPLG
Trigger: CCCCAAGGGGCACCCCTCGCATGTATGATCTGAATG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAGCATGTCACTACCCTaGCCGCAAACATTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSMSLP*PQTFSG
Trigger: GCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACACTCCAGCATGGACTaGATGGCTGCTTCAGTGGAC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTHSSMD*MAASVD
Trigger: GTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGTG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTCCAAAGATGTCATTaGGCCACAGACTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLFQRCH*ATDFCT
Trigger: AGTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCAGCTCCATCAGCTTaGTGCAGATCTCGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSAPSA*CRSRSG
Trigger: GCCTGACCGAGATCTGCACCAAGCTGATGGAGCTGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCAATGTAGGAGCCTCATaGGAACAGGGACCACATCTG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSNVGAS*EQGPHL
Trigger: CAGATGTGGTCCCTGTTCCCATGAGGCTCCTACATT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCATCCTCATGCACGGTaGTGTCCTCCTCCTCACGAA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWHPHAR*CPPPHE
Trigger: TTCGTGAGGAGGAGGACACCACCGTGCATGAGGATG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTATCTCCAAGGTAACTaGCTGCATCACAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: SRSPHERRVSASTKSVGHYLQGN*LHHRLG
Trigger: TCCTAACCTGTGATGCAGCCAGTTACCTTGGAGATA...ATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCACAGGAGGTGAGCATCTaGGAAGAGCTGACAAATTTG +
Preference number: 4 (lower is better)
Translates to: RSPHERRVSASTKSVGHSQEVSI*EELTNL
Trigger: CAAATTTGTCAGCTCTTCCCAGATGCTCACCTCCTG...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAACCTTCTACAGCGTaGAGTACACTGCAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKPSTA*STLQWG
Trigger: TCCCCACTGCAGTGTACTCCACGCTGTAGAAGGTTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTGCAGATCCACATTGTaGGTGAGTGGTAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFCRSTL*VSGNVA
Trigger: AGCAACATTACCACTCACCCACAATGTGGATCTGCA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTGCAGATCCACATTGTaGGTGAGTGGTAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNCRSTL*VSGNVA
Trigger: AGCAACATTACCACTCACCCACAATGTGGATCTGCA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACAGAACTCCCACCGATaGGGTGCCTATGGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTQNSHR*GAYGLV
Trigger: AACAAGGCCATAGGCACCCCATCGGTGGGAGTTCTG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTGCCTCAGACTTTGCTaGGGGAAGAGAAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSCLRLC*GKRNLR
Trigger: CCGAAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGTTGTGGGGAATCGCTaGCTTACCTCTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLVVGNR*LTSEKR
Trigger: CCTCTTCTCAGAGGTAAGCCAGCGATTCCCCACAAC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCGTTGGGGTGTGTTGTaGGGAATCGCTGGCTTACCT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWRWGVL*GIAGLP
Trigger: AGGTAAGCCAGCGATTCCCCACAACACACCCCAACG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAGCATTTTCCATTTCTaGCCCAGGAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNSIFHF*PRNFIS
Trigger: GGAGATGAAGTTCCTGGGCCAGAAATGGAAAATGCT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAGCATTTTCCATTTCTaGCCCAGGAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSIFHF*PRNFIS
Trigger: GGAGATGAAGTTCCTGGGCCAGAAATGGAAAATGCT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTCCATTTCTCATTGTTaGCTAAAGCATTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNSISHC*LKHSKH
Trigger: ATGCTTGGAATGCTTTAGCCAACAATGAGAAATGGA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCACAATGCTGGACGATaGGGTTCACGGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGHNAGR*GSRALS
Trigger: AGACAGAGCCCGTGAACCCCATCGTCCAGCATTGTG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTCATGGCACCAAAGTaGACCAAATGCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFMAPK*TKCPGR
Trigger: ACGACCAGGGCATTTGGTCCACTTTGGTGCCATGAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTTCATGGCACCAAAGTaGACCAAATGCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFFMAPK*TKCPGR
Trigger: ACGACCAGGGCATTTGGTCCACTTTGGTGCCATGAA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGGTGTGATGTCTTCATaGCACCAAAGTGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLGVMSS*HQSGPN
Trigger: ATTTGGTCCACTTTGGTGCCATGAAGACATCACACC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAACTGGTGCTCCAGATaGAAGCCTGATTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNNWCSR*KPDLES
Trigger: AGATTCCAAATCAGGCTTCCATCTGGAGCACCAGTT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGTGTTGCCGCTGGTaGTTCCCGGGTTCATGTTTA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQRCCRW*FPGSCL
Trigger: TAAACATGAACCCGGGAACCACCAGCGGCAACACCG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATGTGGCACTTCGAGGTaGGTCAGAGGATCGGTCGAT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTCGTSR*VRGSVD
Trigger: ATCGACCGATCCTCTGACCCACCTCGAAGTGCCACA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAGGAGGATGAGCTTCTaGTTTTTGAGGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCRRMSF*FLRRGL
Trigger: AAGGCCTCTCCTCAAAAACCAGAAGCTCATCCTCCT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAATGGTTTATGTGGGATaGGTCCGTGAGACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQMVYVG*VRETVL
Trigger: AAGGACAGTCTCACGGACCCATCCCACATAAACCAT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGTGGGATGGTTTATGTaGGATGGGTCCGTGAGACTG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLVGWFM*DGSVRL
Trigger: CAGTCTCACGGACCCATCCCACATAAACCATCCCAC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTGGTGGCCAGCAGGTTaGTGGGATGGTTTATGTGGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWWWPAG*WDGLCG
Trigger: CCCACATAAACCATCCCACCAACCTGCTGGCCACCA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGGATGCATCCACCATaGATATTTTGGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCGMHPP*IFWTLV
Trigger: CACCAGTGTCCAAAATATCCATGGTGGATGCATCCC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGGAAACCCAATAGCGTaGGATGCATCCACCATGGAT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSGNPIA*DASTMD
Trigger: ATCCATGGTGGATGCATCCCACGCTATTGGGTTTCC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTACACAAGACATTCAGTaGAAACCCAATAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLTQDIQ*KPNSVG
Trigger: TCCCACGCTATTGGGTTTCCACTGAATGTCTTGTGT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAAGGTAAAACAAGGCTaGCTGACCGAGAAACTACCA +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNKVKQG*LTEKLP
Trigger: TGGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGAGAGGTCACTGTGCTaGTATGAAGGTAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNERSLC*YEGKTR
Trigger: CCTTGTTTTACCTTCATACCAGCACAGTGACCTCTC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCTCAATCCTACTTCTTaGCCACACAGAGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLNPTS*PHRERT
Trigger: TGTCCTTTCTCTGTGTGGCCAAGAAGTAGGATTGAG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTGCTTCCTGACAGTTaGCGCTCCTCCAGAATCTGC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVLPDS*RSSRIC
Trigger: GCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCGAGGGGTGCCCCTTaGGGTTATTACTTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWARGAP*GYYFGN
Trigger: GTTGCCAAAGTAATAACCCCAAGGGGCACCCCTCGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACGGTGGTTCTCTGCTaGGTAAGAAGCCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSTVVLC*VRSHGR
Trigger: TCTACCATGGCTTCTTACCCAGCAGAGAACCACCGT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATACAGAGCGCCTGTCTaGATTGCTTTATTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQYRAPV*IALFCR
Trigger: CCTGCAGAATAAAGCAATCCAGACAGGCGCTCTGTA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGGCCCACAGAGCTTTTaGCTGTCCTCTCTGAACGCT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTGPQSF*LSSLNA
Trigger: AGCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGAGAAGCTGGAAATATaGATGGTCTCTTCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLEKLEI*MVSSSG
Trigger: ACCCGAAGAAGAGACCATCCATATTTCCAGCTTCTC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
3UTR CAA 72 bp TCTGTAACAGAGGCACAGAGCAATAGCCGACAAGATTaGACTGGTAGATCTAAAGTTATTGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SVTEAQSNSRQD*TGRSKVIAGLC
Trigger: GCAGAGCCCAGCAATAACTTTAGATCTACCAGTCAAATCTTGTCGGCTATTGCTCTGTGCCTCTGTTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGAACCAGAAGAGCCTTaGGACCTAACTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTEPEEP*DLTLDV
Trigger: AACATCCAGAGTTAGGTCTCAAGGCTCTTCTGGTTC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTCGCATGTTCCAGCATACTGGTAGACCTATTTATTGTAACCAACGATATTCCATTCGGGTGCCTCAGGTaGATGGGATCCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: LACSSILVDLFIVTNDIPFGCLR*MGSKFL
Trigger: TAAGAACTTGGATCCCATTCACCTGAGGCACCCGAA...TGGAATATCGTTGGTTACAATAAATAGGTCTACCAGTATGCTGGAACATGCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR TCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGAATCCCCTCTCCCATaGCATTCTGTTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFESPLP*HSVLVT
Trigger: AGTGACCAAAACAGAATGTCATGGGAGAGGGGATTC...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTATTGAGCTGATGACCTaGTCAAATTGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCIELMT*SNWGSS
Trigger: AGAAGACCCCCAATTTGATCAGGTCATCAGCTCAAT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAACAGCTTCAGCCTTTaGACCCTCAGAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFNSFSL*TLRNLQ
Trigger: CTGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCAACAGCTTCAGCCTTTaGACCCTCAGAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSNSFSL*TLRNLQ
Trigger: CTGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAAGGAGGAGAACACATaGAATGTATACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLKEENT*NVYTAQ
Trigger: CTGTGCTGTGTATACATTTCATGTGTTCTCCTCCTT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAAGGAGGAGAACACATaGAATGTATACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPKEENT*NVYTAQ
Trigger: CTGTGCTGTGTATACATTTCATGTGTTCTCCTCCTT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGTCCAGAAGTCCACATaGAAGGAGAGTCTCGGCATC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQVQKST*KESLGI
Trigger: GATGCCGAGACTCTCCTTTCATGTGGACTTCTGGAC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAATTACTCCATCTCTTaGTCCCCCTGCAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCNYSIS*SPCKCC
Trigger: GCAACATTTGCAGGGGGATCAAGAGATGGAGTAATT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACATTCCTGCATAAACTaGAGAGAGGCCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQHSCIN*REASKS
Trigger: GGATTTTGAGGCCTCTCTTCAGTTTATGCAGGAATG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCATTCCTGCATAAACTaGAGAGAGGCCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCHSCIN*REASKS
Trigger: GGATTTTGAGGCCTCTCTTCAGTTTATGCAGGAATG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGCAAGCTATCAGCTATaGCCAAGAATGCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSASYQL*PRMPVN
Trigger: GTTTACGGGCATTCTTGGTCATAGCTGATAGCTTGC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAACTTAGCTGATCCATaGCATCAATCATCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCNLADP*HQSSAC
Trigger: ACAGGCCGATGATTGATGTCATGGATCAGCTAAGTT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGGACCCAGGGGTCTTTaGCAGACTGTGCAAATATCC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWGPRGL*QTVQIS
Trigger: GGATATTTGCACAGTCTGTCAAAGACCCCTGGGTCC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAAACTAAGGACTCTGTaGTCTCAATGCTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFKLRTL*SQCSLV
Trigger: GACTAGAGAGCATTGAGATCACAGAGTCCTTAGTTT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCTTCTACCAATTCTCTaGAAACAAGGGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLLLPIL*KQGNLF
Trigger: GAACAAATTCCCTTGTTTTCAGAGAATTGGTAGAAG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATGGTGTCAGAGGCCTTaGATAGAACAAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPWCQRP*IEQGLT
Trigger: TGTTAAACCTTGTTCTATTCAAGGCCTCTGACACCA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCTTCAAGGATCTGCATaGGCTGCATGGAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLQGSA*AAWRFH
Trigger: ATGAAATCTCCATGCAGCTCATGCAGATCCTTGAAG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGCTCTTCCATGGTTTaGATGGTGTTGTTACGGCAC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSSSMV*MVLLRH
Trigger: GTGCCGTAACAACACCATTCAAACCATGGAAGAGCT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAATACAGATACAACGTaGCGTAGAAAATTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLNTDTT*RRKLVS
Trigger: GCTCACTAATTTTCTACGTCACGTTGTATCTGTATT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGACATGTGCAAGATTTaGAAGTTTGGGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLDMCKI*KFGVLL
Trigger: GAGAAGAACCCCAAACTTTCAAATCTTGCACATGTC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCATACCGCCTCCCGATaGTTGGAGTCTCCGAAATAT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLHTASR*LESPKY
Trigger: ATATTTCGGAGACTCCAATCATCGGGAGGCGGTATG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGTCCCTTTGACAAAGTaGCCCTGCTTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWVPLTK*PCFSFR
Trigger: CCTGAAGGAGAAGCAGGGTCACTTTGTCAAAGGGAC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTCCCTTTGACAAAGTaGCCCTGCTTCTCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVPLTK*PCFSFR
Trigger: CCTGAAGGAGAAGCAGGGTCACTTTGTCAAAGGGAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTTGGCTGTCCTCTCTaGACGCTCTCTTCACTCATT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFGCPL*TLSSLI
Trigger: AATGAGTGAAGAGAGCGTTCAGAGAGGACAGCCAAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGGGCTTTCTGAAGTTTTaGCCCATATGCTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RCLLANTVTFAHPGFISLGFLKF*PICCLF
Trigger: GAACAAGCAGCATATGGGTCAAAACTTCAGAAAGCC...CAAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR TCA 90 bp CGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGCAGGCTTTATCTCTTTaGGAAATGGAAGTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RCLLANTVTFAHPGFISLQALSL*EMEVLA
Trigger: GGCCAGAACTTCCATTTCTCAAAGAGATAAAGCCTG...CAAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGATGGAGCTAACTTCGTaGACCTGGCCGATGAGCTTA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLMELTS*TWPMSL
Trigger: TAAGCTCATCGGCCAGGTGCACGAAGTTAGCTCCAT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACATGGACTGGATGGCTaGTTCAGTGGACGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTHGLDG*FSGREG
Trigger: ACCTTCACGTCCACTGAAGCAGCCATCCAGTCCATG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCTTTTCCAGGGGCTCTaGCATAATGATACGAATCTT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLFQGL*HNDTNL
Trigger: AAGATTCGTATCATTATGGCAGAGCCCCTGGAAAAG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGGGTCTTCTCCACGTTaGAGAGATTTTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFGSSPR*RDFVNG
Trigger: GCCATTGACAAAATCTCTGCAACGTGGAGAAGACCC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGGGTCTTCTCCACGTTaGAGAGATTTTGTCAATGGC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTGSSPR*RDFVNG
Trigger: GCCATTGACAAAATCTCTGCAACGTGGAGAAGACCC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGTGATTCATCCTCAATaGCATTTTGCCTTTTATACC +
Preference number: 4 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLVIHPQ*HFAFYT
Trigger: GGTATAAAAGGCAAAATGGCATTGAGGATGAATCAC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCCGGGTCCAGGACTTaGTTCTTATTTGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSGSRT*FLFAGR
Trigger: GCGTCCAGCAAATAAGAAGCAAGTCCTGGACCCGGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGAAAGATCATCCTCATaGACGGTGGTGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWERSSS*TVVSSS
Trigger: GGAGGAGGACACCACCGTGCATGAGGATGATCTTTC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAGCTGCATTCAAAAGCTaGTGGGAGTTCATTGATGGA +
Preference number: 4 (lower is better)
Translates to: RSPHERRVSASTKSVGHSAAFKS*WEFIDG
Trigger: TCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGC...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGGTAAACTGGTCCAGTaGCCGATTGCCTTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFGKLVQ*PIAFFF
Trigger: GAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCACTCCAATGACTTCTaGATACAGGTCTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCHSNDF*IQVCHN
Trigger: ATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTACCACATATGGGTTCTaGTCTTTGTGCCGTAATTCT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLTTYGF*SLCRNS
Trigger: AGAATTACGGCACAAAGAGCAGAACCCATATGTGGT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGAGACTGAATGCTTTTaGTGGTTTTCCCACACAAAG +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPETECF*WFSHTK
Trigger: CTTTGTGTGGGAAAACCAGCAAAAGCATTCAGTCTC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGAGACTGAATGCTTTTaGTGGTTTTCCCACACAAAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLETECF*WFSHTK
Trigger: CTTTGTGTGGGAAAACCAGCAAAAGCATTCAGTCTC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGGTTCCCCATCTTTCTaGTGCAAGCTATCAGCTATG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTGSPSF*CKLSAM
Trigger: CATAGCTGATAGCTTGCAGCAGAAAGATGGGGAACC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTGGCCACCTGGAAACTaGAGAGTAAAACCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSWPPGN*RVKPEQ
Trigger: TTGCTCTGGTTTTACTCTGCAGTTTCCAGGTGGCCA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTAAAACGGACAGTTTaGGTGTGGCCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLKRTV*VWPPGN
Trigger: GTTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCGTCATCCTCAGGCTaGCCCAGGGCAATAAACAAC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSSSSG*PRAINN
Trigger: GTTGTTTATTGCCCTGGGGCAGCCTGAGGATGACGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGTCTTTGACAGACTGTaGAAATATCCAGACATGGGA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFVFDRL*KYPDMG
Trigger: TCCCATGTCTGGATATTTGCACAGTCTGTCAAAGAC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGTCTTTGACAGACTGTaGAAATATCCAGACATGGGA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLVFDRL*KYPDMG
Trigger: TCCCATGTCTGGATATTTGCACAGTCTGTCAAAGAC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCATAGTTGTCTCCGCTaGCGGCAGTGCTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGHSCLR*RQCWFS
Trigger: AGAAAACCAGCACTGCCGGCAGCGGAGACAACTATG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAAGGCTAATCAGGAACTaGAAGGTGATCCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTRLIRN*KVILRL
Trigger: CAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACTCAATGAGCTTGTTTaGCTTCTCATCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLNELV*LLICFS
Trigger: GCTGAAACAGATGAGAAGGCAAACAAGCTCATTGAG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCTCAATGAGCTTGTTTaGCTTCTCATCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLNELV*LLICFS
Trigger: GCTGAAACAGATGAGAAGGCAAACAAGCTCATTGAG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATGTGCTGACAGAGGTTaGTTGAGGGCCCGGAATATC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTCADRG*LRARNI
Trigger: GATATTCCGGGCCCTCAAGCAACCTCTGTCAGCACA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTATGTGCCAGTAGTCTaGTCAACAGCCTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSYVPVV*STALRP
Trigger: TGGCCTTAAGGCTGTTGAGCAGACTACTGGCACATA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTATGTGCCAGTAGTCTaGTCAACAGCCTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFYVPVV*STALRP
Trigger: TGGCCTTAAGGCTGTTGAGCAGACTACTGGCACATA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCTGAAGACTCTAAACTaGTGCTCGCTGTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLKTLN*CSLFVS
Trigger: TGACACAAACAGCGAGCAGCAGTTTAGAGTCTTCAG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCAGCTTCATTTTGCCTaGCCCTTTCTCAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWQLHFA*PFLSPR
Trigger: TCGTGGGCTGAGAAAGGGGCAGGCAAAATGAAGCTG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCTGGACCATTTTTGGTaGAAAGAGATCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLDHFW*KEIQGF
Trigger: AAAGCCCTGGATCTCTTTGCACCAAAAATGGTCCAG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTTTGGCAACCCACATaGAAAACTTCATGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLWQPT*KTSCVP
Trigger: GGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTGCTGGCGTGGGGCTaGATCCTACACAATTTTTCC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLLAWG*ILHNFS
Trigger: GGAAAAATTGTGTAGGATGCAGCCCCACGCCAGCAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCTCATGCTTTACCCTaGACTTGTTTGGGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSHALP*TCLGSL
Trigger: TAAGCTTCCCAAACAAGTGCAGGGTAAAGCATGAGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS-3UTR CCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTCTTGTTCTCCTGTTTTaGCTGAATCCCCTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFLVLLF*LNPLSH
Trigger: ATGGGAGAGGGGATTCAGCCAAAACAGGAGAACAAG...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCATTCAAAAGCTGCTaGGAGTTCATTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNAFKSC*EFIDGT
Trigger: AGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGCATTCAAAAGCTGCTaGGAGTTCATTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFAFKSC*EFIDGT
Trigger: AGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTATCTCCAAGGTAACTaGCTGCATCACAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCYLQGN*LHHRLG
Trigger: TCCTAACCTGTGATGCAGCCAGTTACCTTGGAGATA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACAGGAGGTGAGCATCTaGGAAGAGCTGACAAATTTG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTQEVSI*EELTNL
Trigger: CAAATTTGTCAGCTCTTCCCAGATGCTCACCTCCTG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAAAGAAAGTTCCAGCGTaGTGTCATACAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQKKVPA*CHTGFP
Trigger: TGGAAAGCCTGTATGACACCACGCTGGAACTTTCTT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCAAATATCCAGACATaGGAAGGGCTTTTCACATCA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLANIQT*EGLFTS
Trigger: TGATGTGAAAAGCCCTTCCCATGTCTGGATATTTGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCAAATATCCAGACATaGGAAGGGCTTTTCACATCA +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNANIQT*EGLFTS
Trigger: TGATGTGAAAAGCCCTTCCCATGTCTGGATATTTGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTATTAATTGGGCTATTTaGGTCCACCAGAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCINWAI*VHQRHH
Trigger: GTGATGCCTCTGGTGGACCCAAATAGCCCAATTAAT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTTCTTGGCATTAATTaGGCTATTTGGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLFLGIN*AIWVHQ
Trigger: CTGGTGGACCCAAATAGCCCAATTAATGCCAAGAAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCGTTTCTTGTTCTCTaGTCTTCTTTCCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQAFLVL*SSFQSF
Trigger: GAAGCTCTGGAAAGAAGACCAGAGAACAAGAAACGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTGCCTCAGACTTTGCTaGGGGAAGAGAAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLCLRLC*GKRNLR
Trigger: CCGAAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGTTGTGGGGAATCGCTaGCTTACCTCTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWVVGNR*LTSEKR
Trigger: CCTCTTCTCAGAGGTAAGCCAGCGATTCCCCACAAC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTGTGGGGAATCGCTaGCTTACCTCTGAGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTVVGNR*LTSEKR
Trigger: CCTCTTCTCAGAGGTAAGCCAGCGATTCCCCACAAC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTACATCTTCTACCTCCTaGGTCATCTGTGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFTSSTS*VICGRF
Trigger: AAACCTCCCACAGATGACCCAGGAGGTAGAAGATGT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGTGTGATGTCTTCATaGCACCAAAGTGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCGVMSS*HQSGPN
Trigger: ATTTGGTCCACTTTGGTGCCATGAAGACATCACACC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCTGTTAGTTTACTGCTaGAGCTTAAATCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFLLVYC*SLNLVR
Trigger: CCTCACCAGATTTAAGCTCCAGCAGTAAACTAACAG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTATGGTTTATGTGGGATaGGTCCGTGAGACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFMVYVG*VRETVL
Trigger: AAGGACAGTCTCACGGACCCATCCCACATAAACCAT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAGCAGGTTGGTGGGATaGTTTATGTGGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSRLVG*FMWDGS
Trigger: GGACCCATCCCACATAAACCATCCCACCAACCTGCT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAGCAGGTTGGTGGGATaGTTTATGTGGGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSRLVG*FMWDGS
Trigger: GGACCCATCCCACATAAACCATCCCACCAACCTGCT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACCACCATGGATATTTTaGACACTGGTGTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTPPWIF*TLVSAD
Trigger: GTCTGCTGACACCAGTGTCCAAAATATCCATGGTGG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAAAGGTAAAACAAGGCTaGCTGACCGAGAAACTACCA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQKVKQG*LTEKLP
Trigger: TGGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCAAGGACGTTGGAGTTaGAGCCTGAGGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWQGRWS*SLRKWK
Trigger: CTTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTGGAACAAGGACGTTaGAGTTGGAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLEQGR*SWSLRK
Trigger: CTTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCTGGAACAAGGACGTTaGAGTTGGAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLEQGR*SWSLRK
Trigger: CTTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACTCAATCCTACTTCTTaGCCACACAGAGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQLNPTS*PHRERT
Trigger: TGTCCTTTCTCTGTGTGGCCAAGAAGTAGGATTGAG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATCATCGGAGTCCTCATaGTGCATTTTATTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSSESS*CILFRL
Trigger: TAGCCTGAATAAAATGCACCATGAGGACTCCGATGA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTCTTACAGTTTTCAGTaGCCAGCTTCATTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLSYSFQ*PASFCL
Trigger: CAGGCAAAATGAAGCTGGCCACTGAAAACTGTAAGA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCTTACAGTTTTCAGTaGCCAGCTTCATTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSYSFQ*PASFCL
Trigger: CAGGCAAAATGAAGCTGGCCACTGAAAACTGTAAGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTCACCGATGTTAGATaGGTTAGAGGTGGGAATGAC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLTDVR*VRGGND
Trigger: GTCATTCCCACCTCTAACCCATCTAACATCGGTGAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCCCGCAAACATTCAGTaGCTTCCCATCTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGPANIQ*LPILLS
Trigger: GCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGAACCAGAAGAGCCTTaGGACCTAACTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLEPEEP*DLTLDV
Trigger: AACATCCAGAGTTAGGTCTCAAGGCTCTTCTGGTTC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTCGGGTGCCTCAGGTaGATGGGATCCAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGFGCLR*MGSKFL
Trigger: TAAGAACTTGGATCCCATTCACCTGAGGCACCCGAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTGGTCTGTATTCATGTaGTTCATCCTCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLWSVFM*FILNAI
Trigger: AATGGCATTGAGGATGAATCACATGAATACAGACCA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTGGTCTGTATTCATGTaGTTCATCCTCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFWSVFM*FILNAI
Trigger: AATGGCATTGAGGATGAATCACATGAATACAGACCA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAGCACAGGAGCCATCTaGGTCACACATAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSTGAI*VTHKLV
Trigger: AACCAGCTTATGTGTGACTCAGATGGCTCCTGTGCT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGCACAGGAGCCATCTaGGTCACACATAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSTGAI*VTHKLV
Trigger: AACCAGCTTATGTGTGACTCAGATGGCTCCTGTGCT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TGCAGTTCTAACACACTGAACTTGAGCTTGTCCAGAAGTCCACATGAAAGGAGAAAGGAGGAGAACACATaGAATGTATACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: CSSNTLNLSLSRSPHERRKEENT*NVYTAQ
Trigger: CTGTGCTGTGTATACATTTCATGTGTTCTCCTCCTT...TCTCCTTTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTCGGAGTCCCCTGGTTaGCAGGTAATTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSESPG*QVITPS
Trigger: AGATGGAGTAATTACCTGTCAACCAGGGGACTCCGA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCGGAGTCCCCTGGTTaGCAGGTAATTACTCCATCT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSESPG*QVITPS
Trigger: AGATGGAGTAATTACCTGTCAACCAGGGGACTCCGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGTTATAAGTCGGCTCTaGGTAGCTGTGTTGCTTTCA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTVISRL*VAVLLS
Trigger: TGAAAGCAACACAGCTACTCAGAGCCGACTTATAAC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAATAAGTTCAAGTTTTaGCATCCCATCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLNKFKF*HPIRKQ
Trigger: CTGCTTCCTGATGGGATGTCAAAACTTGAACTTATT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAATTCATCATCCATATaGATAGAGAGCCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLNSSSI*IESLAS
Trigger: ACTGGCTAGGCTCTCTATTCATATGGATGATGAATT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAATTCATCATCCATATaGATAGAGAGCCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNNSSSI*IESLAS
Trigger: ACTGGCTAGGCTCTCTATTCATATGGATGATGAATT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAATTTGCGATGAGCTCTaGATTTCTGATTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPICDEL*ISDFVG
Trigger: GCCAACAAAATCAGAAATTCAGAGCTCATCGCAAAT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACATCATAATGGCTATTaGCCAGGACTGCGTTCCATT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTHHNGY*PGLRSI
Trigger: AATGGAACGCAGTCCTGGTCAATAGCCATTATGATG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCATCATAATGGCTATTaGCCAGGACTGCGTTCCATT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFHHNGY*PGLRSI
Trigger: AATGGAACGCAGTCCTGGTCAATAGCCATTATGATG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATGGTGTCAGAGGCCTTaGATAGAACAAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQWCQRP*IEQGLT
Trigger: TGTTAAACCTTGTTCTATTCAAGGCCTCTGACACCA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCTCAGCGACTTTCTTTaGGTATACAAAAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNLSDFL*VYKKLC
Trigger: GCAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTGTTGGGTACAAGCCTaGATTCTGTCCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWCWVQA*ILSSVA
Trigger: TGCCACACTGGACAGAATTCAGGCTTGTACCCAACA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGACATGTGCAAGATTTaGAAGTTTGGGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQDMCKI*KFGVLL
Trigger: GAGAAGAACCCCAAACTTTCAAATCTTGCACATGTC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTCAGCATATGCTTCATaGAGGTATCGACAGACCACA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSAYAS*RYRQTT
Trigger: TGTGGTCTGTCGATACCTTCATGAAGCATATGCTGA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAAGGTCCATGTAGCTaGGAAGACTGTAGATCACCT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKGPCS*EDCRSP
Trigger: AGGTGATCTACAGTCTTCTCAGCTACATGGACCTTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACATACCGCCTCCCGATaGTTGGAGTCTCCGAAATAT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQHTASR*LESPKY
Trigger: ATATTTCGGAGACTCCAATCATCGGGAGGCGGTATG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCAGGCTGTCAGCTTTTaGCCATCTTACAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFQAVSF*PSYSFQ
Trigger: CTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACCCAACAAAACTCTCTaGAAGTTGTCTACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQPNKTL*KLSTVV
Trigger: AACCACAGTAGACAACTTTCAGAGAGTTTTGTTGGG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGTTCACGCATGTGTGTaGTGCCTACAATTAATTACA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFVHACV*CLQLIT
Trigger: TGTAATTAATTGTAGGCATCACACACATGCGTGAAC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAATGGAGCTAACTTCGTaGACCTGGCCGATGAGCTTA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTMELTS*TWPMSL
Trigger: TAAGCTCATCGGCCAGGTGCACGAAGTTAGCTCCAT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAATAGAGAGGGTCAGCTaGAATGACTGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQIERVS*NDCTGF
Trigger: GAAGCCAGTGCAGTCATTGCAGCTGACCCTCTCTAT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAATAGAGAGGGTCAGCTaGAATGACTGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTIERVS*NDCTGF
Trigger: GAAGCCAGTGCAGTCATTGCAGCTGACCCTCTCTAT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCTGCATTCAAAAGCTaGTGGGAGTTCATTGATGGA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFAAFKS*WEFIDG
Trigger: TCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTGTTGCCTTACAATTTaGAAGCCAAGAGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFCCLTI*KPRECG
Trigger: GCCACACTCTCTTGGCTTGCAAATTGTAAGGCAACA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCCACAATATGCATATTaGCAGTGTTGGGACCAAGGT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFPQYAY*QCWDQG
Trigger: ACCTTGGTCCCAACACTGGCAATATGCATATTGTGG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAAGGGAATTTGGCTTGTaGCAACACTCCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTREFGL*QHSNDF
Trigger: GAAGTCATTGGAGTGTTGGCACAAGCCAAATTCCCT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATACAAGGCCAAGGAATaGTTCTTTCGAGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPYKAKE*FFREES
Trigger: ACTTTCTTCTCGAAAGAAGCATTCCTTGGCCTTGTA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTAGAGAGATTCCAGTaGAACTCGAGCCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVERFQ*NSSHLG
Trigger: CCCAAGATGGCTCGAGTTGCACTGGAATCTCTCTAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGTAGAGAGATTCCAGTaGAACTCGAGCCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWVERFQ*NSSHLG
Trigger: CCCAAGATGGCTCGAGTTGCACTGGAATCTCTCTAC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTCCCCATCTTTCTGCTaGAAGCTATCAGCTATGACC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSPSFC*KLSAMT
Trigger: GGTCATAGCTGATAGCTTGCAGCAGAAAGATGGGGA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACATTCCACCAACCACTaGAGATCCACATTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQHSTNH*RSTLWV
Trigger: CACCCACAATGTGGATCTGCAGTGGTTGGTGGAATG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGCTATTGACCAGGACTaGGTTCCATTCCACCAACCA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTAIDQD*VPFHQP
Trigger: TGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAGC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTTGAAGCAGCCAGATaGAAGTTGGTAGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFEAAR*KLVGTC
Trigger: ACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTTTGCTTCAAGGATCTaGATGAGCTGCATGGAGATT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCFASRI*MSCMEI
Trigger: AATCTCCATGCAGCTCATGCAGATCCTTGAAGCAAA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGATCCTCCAGAGCTATTaGTGTATCTTGACTCGAGGC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLILQSY*CILTRG
Trigger: GCCTCGAGTCAAGATACAGCAATAGCTCTGGAGGAT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGAGGGCTGTCTGCAATaGAACTTCACTCAACTGGTG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTEGCLQ*NFTQLV
Trigger: CACCAGTTGAGTGAAGTTGCATTGCAGACAGCCCTC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGAGGGCTGTCTGCAATaGAACTTCACTCAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGEGCLQ*NFTQLV
Trigger: CACCAGTTGAGTGAAGTTGCATTGCAGACAGCCCTC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTTGCGAGGGCTGTCTaGAATGCAACTTCACTCAAC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLARAV*NATSLN
Trigger: GTTGAGTGAAGTTGCATTGCAGACAGCCCTCGCAAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGTCCTGTGCTCTTTCTaGTTGCTGTTAGTTTACTGC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSVLCSF*LLLVYC
Trigger: GCAGTAAACTAACAGCAAGCAGAAAGAGCACAGGAC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTGTTTAGTTGTCCTGTaGTCTTTCTGCTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFCLVVL*SFCLLL
Trigger: TAACAGCAAGCAGAAAGAGCACAGGACAACTAAACA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTGTTTAGTTGTCCTGTaGTCTTTCTGCTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLCLVVL*SFCLLL
Trigger: TAACAGCAAGCAGAAAGAGCACAGGACAACTAAACA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCCCAATAGCGTGGGATaGATCCACCATGGATATTTT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFPNSVG*IHHGYF
Trigger: AAAATATCCATGGTGGATGCATCCCACGCTATTGGG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCTTCTCCAGCAGCTCTaGCAGGTAGGTAACCATATT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLLLQQL*QVGNHI
Trigger: AATATGGTTACCTACCTGGCAGAGCTGCTGGAGAAG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGACCAAGCTTGTCTGGTaGTCAAGCAGATCCAGATCC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWTKLVW*SSRSRS
Trigger: GGATCTGGATCTGCTTGAGCACCAGACAAGCTTGGT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTGAAGACTCTAAACTaGTGCTCGCTGTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLKTLN*CSLFVS
Trigger: TGACACAAACAGCGAGCAGCAGTTTAGAGTCTTCAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAATGATTAGGTCTGAGTaGTCCAGGATCTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTMIRSE*SRIWLA
Trigger: AGCCAGCCAGATCCTGGAGCACTCAGACCTAATCAT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCSSVAS*ICSVKC
Trigger: ACATTTGACCGAGCATATGCAACTCGCTACTGAAGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTGGACCATTTTTGGTaGAAAGAGATCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLDHFW*KEIQGF
Trigger: AAAGCCCTGGATCTCTTTGCACCAAAAATGGTCCAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTATATTCAGTAGTGTCTaGACCTCATCATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLIFSSV*TSSSEL
Trigger: CAGTTCTGATGATGAGGTCCAGACACTACTGAATAT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAATGTAGGAGCCTCATaGGAACAGGGACCACATCTG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTNVGAS*EQGPHL
Trigger: CAGATGTGGTCCCTGTTCCCATGAGGCTCCTACATT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCATATTGCCAGTGTTaGGACCAAGGTACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLAYCQC*DQGTLL
Trigger: AAGAAGGGTACCTTGGTCCCAACACTGGCAATATGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTACAGCAGGGAATTTaGCTTGTGCCAACACTCCAA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLQQGI*LVPTLQ
Trigger: TTGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAAAGAAAGTTCCAGCGTaGTGTCATACAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTKKVPA*CHTGFP
Trigger: TGGAAAGCCTGTATGACACCACGCTGGAACTTTCTT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTGCAGATCCACATTGTaGGTGAGTGGTAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSCRSTL*VSGNVA
Trigger: AGCAACATTACCACTCACCCACAATGTGGATCTGCA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAATTAATTGGGCTATTTaGGTCCACCAGAGGCATCAC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTINWAI*VHQRHH
Trigger: GTGATGCCTCTGGTGGACCCAAATAGCCCAATTAAT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTTTCTTGGCATTAATTaGGCTATTTGGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCFLGIN*AIWVHQ
Trigger: CTGGTGGACCCAAATAGCCCAATTAATGCCAAGAAA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCTTCGGTGGTGAACTaGAACACACTGAATCAAGTT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCSSVVN*NTLNQV
Trigger: AACTTGATTCAGTGTGTTCCAGTTCACCACCGAAGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATGCCTCAGACTTTGCTaGGGGAAGAGAAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQCLRLC*GKRNLR
Trigger: CCGAAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTTCTCCTCAGCATCTaGGAAATTTTCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVLLSI*EIFLAS
Trigger: GCTGGCCAGGAAAATTTCCCAGATGCTGAGGAGAAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGTTCTCCTCAGCATCTaGGAAATTTTCCTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQVLLSI*EIFLAS
Trigger: GCTGGCCAGGAAAATTTCCCAGATGCTGAGGAGAAC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGACTCGAGGCGAGTGTaGGCTCTGATGACATTACTA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGDSRRV*ALMTLL
Trigger: TAGTAATGTCATCAGAGCCCACACTCGCCTCGAGTC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGACATCTTCTACCTCCTaGGTCATCTGTGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLTSSTS*VICGRF
Trigger: AAACCTCCCACAGATGACCCAGGAGGTAGAAGATGT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTCATGGCACCAAAGTaGACCAAATGCCCTGGTCGT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGFMAPK*TKCPGR
Trigger: ACGACCAGGGCATTTGGTCCACTTTGGTGCCATGAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAGGAGGATGAGCTTCTaGTTTTTGAGGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLRRMSF*FLRRGL
Trigger: AAGGCCTCTCCTCAAAAACCAGAAGCTCATCCTCCT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGGGATGCATCCACCATaGATATTTTGGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLGMHPP*IFWTLV
Trigger: CACCAGTGTCCAAAATATCCATGGTGGATGCATCCC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAACACAAGACATTCAGTaGAAACCCAATAGCGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTTQDIQ*KPNSVG
Trigger: TCCCACGCTATTGGGTTTCCACTGAATGTCTTGTGT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTCCGAAATATCGAAGTaGAAGTCCAGGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSEISK*KSRVFP
Trigger: TGGGAAAACCCTGGACTTCCACTTCGATATTTCGGA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATCCGAAATATCGAAGTaGAAGTCCAGGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTSEISK*KSRVFP
Trigger: TGGGAAAACCCTGGACTTCCACTTCGATATTTCGGA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCCGCCTCCCGATGATTaGAGTCTCCGAAATATCGAA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGPPPDD*SLRNIE
Trigger: TTCGATATTTCGGAGACTCCAATCATCGGGAGGCGG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACTCAATCCTACTTCTTaGCCACACAGAGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLNPTS*PHRERT
Trigger: TGTCCTTTCTCTGTGTGGCCAAGAAGTAGGATTGAG...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAACACAGCATGATGAGTaGAGTCTGTCCAGGACGTTC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQTQHDE*SLSRTF
Trigger: GAACGTCCTGGACAGACTCCACTCATCATGCTGTGT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGAAAGTTGTCTACTGTaGTTAGCCACAGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFESCLL*LATETF
Trigger: AAAGGTTTCTGTGGCTAACCACAGTAGACAACTTTC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTACGGTGGTTCTCTGCTaGGTAAGAAGCCATGGTAGA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGTVVLC*VRSHGR
Trigger: TCTACCATGGCTTCTTACCCAGCAGAGAACCACCGT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTACAGAGCGCCTGTCTaGATTGCTTTATTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLYRAPV*IALFCR
Trigger: CCTGCAGAATAAAGCAATCCAGACAGGCGCTCTGTA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CAA 72 bp AAATATTCTTGCAGTTCTAACACACTGAACTTGAGCTaGTCCAGAAGTCCACATGAAAGGAGAGTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: KYSCSSNTLNLS*SRSPHERRVSA
Trigger: TGCCGAGACTCTCCTTTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGAACTGCAAGAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGAACCAGAAGAGCCTTaGGACCTAACTCTGGATGTT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQEPEEP*DLTLDV
Trigger: AACATCCAGAGTTAGGTCTCAAGGCTCTTCTGGTTC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGTAAGTTTCCACATCCTCTAATTACCATTGTCCAAGTACTGAACCTAAAAGAATTCTCCTGTTTTGGCTaGATCCCCTCTCCCATGACA +
Preference number: 4 (lower is better)
Translates to: GKFPHPLITIVQVLNLKEFSCFG*IPSPMT
Trigger: TGTCATGGGAGAGGGGATTCAGCCAAAACAGGAGAA...TTCTTTTAGGTTCAGTACTTGGACAATGGTAATTAGAGGATGTGGAAACTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGATTGAGCTGATGACCTaGTCAAATTGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLIELMT*SNWGSS
Trigger: AGAAGACCCCCAATTTGATCAGGTCATCAGCTCAAT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTGGTCTGTATTCATGTaGTTCATCCTCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCWSVFM*FILNAI
Trigger: AATGGCATTGAGGATGAATCACATGAATACAGACCA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATATTCTTGCAGTTCTAACACACTGAACTTGAGCTTGTCCAGAAGTCCACATAACAGCTTCAGCCTTTaGACCCTCAGAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: KYSCSSNTLNLSLSRSPHNSFSL*TLRNLQ
Trigger: CTGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTT...ATGTGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGAACTGCAAGAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAACAGCTTCAGCCTTTaGACCCTCAGAAATCTGCAG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTNSFSL*TLRNLQ
Trigger: CTGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGCATCTGGGAAGAGCTaGCAAATTTGGATCCGATTC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQASGKS*QIWIRF
Trigger: GAATCGGATCCAAATTTGTCAGCTCTTCCCAGATGC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGCATCTGGGAAGAGCTaGCAAATTTGGATCCGATTC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGASGKS*QIWIRF
Trigger: GAATCGGATCCAAATTTGTCAGCTCTTCCCAGATGC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAATTACTCCATCTCTTaGTCCCCCTGCAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLNYSIS*SPCKCC
Trigger: GCAACATTTGCAGGGGGATCAAGAGATGGAGTAATT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTGTCTATTACAGGATaGAGTGGAATCTGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLSITG*SGICFK
Trigger: TTTGAAACAGATTCCACTTCATCCTGTAATAGACAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACTGTCTATTACAGGATaGAGTGGAATCTGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLSITG*SGICFK
Trigger: TTTGAAACAGATTCCACTTCATCCTGTAATAGACAG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGCAAGCTATCAGCTATaGCCAAGAATGCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGASYQL*PRMPVN
Trigger: GTTTACGGGCATTCTTGGTCATAGCTGATAGCTTGC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGCAAGCTATCAGCTATaGCCAAGAATGCCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTASYQL*PRMPVN
Trigger: GTTTACGGGCATTCTTGGTCATAGCTGATAGCTTGC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAATGGAAGAACTTAGCTaGTCCATGACATCAATCATC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQMEELS*SMTSII
Trigger: GATGATTGATGTCATGGATCAGCTAAGTTCTTCCAT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCATCATAATGGCTATTaGCCAGGACTGCGTTCCATT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLHHNGY*PGLRSI
Trigger: AATGGAACGCAGTCCTGGTCAATAGCCATTATGATG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAACTAAGGACTCTGTaGTCTCAATGCTCTCTAGTC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKLRTL*SQCSLV
Trigger: GACTAGAGAGCATTGAGATCACAGAGTCCTTAGTTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTGGTGTCAGAGGCCTTaGATAGAACAAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFWCQRP*IEQGLT
Trigger: TGTTAAACCTTGTTCTATTCAAGGCCTCTGACACCA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCTTCTCGTACACTGTaGTCCACCACCATTTCAGTC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSSRTL*STTISV
Trigger: GACTGAAATGGTGGTGGATCACAGTGTACGAGAAGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCTTCTCGTACACTGTaGTCCACCACCATTTCAGTC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSSRTL*STTISV
Trigger: GACTGAAATGGTGGTGGATCACAGTGTACGAGAAGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAATACAGATACAACGTaGCGTAGAAAATTAGTGAGC +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLNTDTT*RRKLVS
Trigger: GCTCACTAATTTTCTACGTCACGTTGTATCTGTATT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATCTTCTAAACAAACCTaGGCAATCCTTTCGGCTATA +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSSKQT*AILSAI
Trigger: TATAGCCGAAAGGATTGCTCAGGTTTGTTTAGAAGA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGACATGTGCAAGATTTaGAAGTTTGGGGTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTDMCKI*KFGVLL
Trigger: GAGAAGAACCCCAAACTTTCAAATCTTGCACATGTC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATGTATTTCTATTTTTaGGAGGTCACTGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNMYFYF*EVTVLV
Trigger: TACCAGCACAGTGACCTCTCAAAAATAGAAATACAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCAGGCTGTCAGCTTTTaGCCATCTTACAGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLQAVSF*PSYSFQ
Trigger: CTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTGCATGCCTGACAGGTaGAAAGACTTGGAATTTATC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSCMPDR*KDLEFI
Trigger: GATAAATTCCAAGTCTTTTCACCTGTCAGGCATGCA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGAAAGACGGCATAAATaGGATTGTTACATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNERRHK*DCYMFL
Trigger: GAGAAACATGTAACAATCTCATTTATGCCGTCTTTC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCCCAACAAAACTCTCTaGAAGTTGTCTACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFPNKTL*KLSTVV
Trigger: AACCACAGTAGACAACTTTCAGAGAGTTTTGTTGGG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAGAAAACTCAGTTCATaGCGAATCTGTTCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNRKLSS*RICSFY
Trigger: GTAGAAAGAACAGATTCGTCATGAACTGAGTTTTCT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTATAGCCGACAAGATTTaGCTGGTAGATCTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLIADKI*LVDLKL
Trigger: TAACTTTAGATCTACCAGTCAAATCTTGTCGGCTAT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGCAGTTAGAGATGCAATaGACTGGAAATATGGATGGT +
Preference number: 4 (lower is better)
Translates to: RCLLANTVTFAHPGFISLQLEMQ*TGNMDG
Trigger: ACCATCCATATTTCCAGTTCATTGCATCTCTAACTG...CAAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCTGCCGCAAAGCTTTaGCGAGTTCGTTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSAAKL*RVRCSS
Trigger: TGAAGAACAACGAACTCGGCAAAGCTTTGCGGCAGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCTTTTCCAGGGGCTCTaGCATAATGATACGAATCTT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLFQGL*HNDTNL
Trigger: AAGATTCGTATCATTATGGCAGAGCCCCTGGAAAAG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTTTTCCAGGGGCTCTaGCATAATGATACGAATCTT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLFQGL*HNDTNL
Trigger: AAGATTCGTATCATTATGGCAGAGCCCCTGGAAAAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGTGATTCATCCTCAATaGCATTTTGCCTTTTATACC +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLVIHPQ*HFAFYT
Trigger: GGTATAAAAGGCAAAATGGCATTGAGGATGAATCAC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTGTTGCCTTACAATTTaGAAGCCAAGAGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLCCLTI*KPRECG
Trigger: GCCACACTCTCTTGGCTTGCAAATTGTAAGGCAACA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTCTGCATACAGGTCTaGCACAATATGCATATTGCC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFCIQV*HNMHIA
Trigger: GGCAATATGCATATTGTGGCAGACCTGTATGCAGAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTTCTGCATACAGGTCTaGCACAATATGCATATTGCC +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFFCIQV*HNMHIA
Trigger: GGCAATATGCATATTGTGGCAGACCTGTATGCAGAA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGAGACTGAATGCTTTTaGTGGTTTTCCCACACAAAG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFETECF*WFSHTK
Trigger: CTTTGTGTGGGAAAACCAGCAAAAGCATTCAGTCTC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTGGCCACCTGGAAACTaGAGAGTAAAACCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWWPPGN*RVKPEQ
Trigger: TTGCTCTGGTTTTACTCTGCAGTTTCCAGGTGGCCA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATTAAAACGGACAGTTTaGGTGTGGCCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLKRTV*VWPPGN
Trigger: GTTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTAAAACGGACAGTTTaGGTGTGGCCACCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLKRTV*VWPPGN
Trigger: GTTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACAAGTTGGCCACCATTaGACTAAAATGTGCCCGGAT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTQVGHH*TKMCPD
Trigger: ATCCGGGCACATTTTAGTGCAATGGTGGCCAACTTG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTTGCTTCAAGGATCTaGATGAGCTGCATGGAGATT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFASRI*MSCMEI
Trigger: AATCTCCATGCAGCTCATGCAGATCCTTGAAGCAAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGTATACAAAAAGCTTTaGTTCAAGGATCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLVYKKL*FKDLHE
Trigger: CTCATGCAGATCCTTGAAGCAAAGCTTTTTGTATAC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAGGCTAATCAGGAACTaGAAGGTGATCCTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWRLIRN*KVILRL
Trigger: CAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAATCCTCCAGAGCTATTaGTGTATCTTGACTCGAGGC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQILQSY*CILTRG
Trigger: GCCTCGAGTCAAGATACAGCAATAGCTCTGGAGGAT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTTGCTGTTAGTTTACTaGTGGAGCTTAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLLLVY*WSLNLV
Trigger: CACCAGATTTAAGCTCCAGCAGTAAACTAACAGCAA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCGCTCCTCCAGAATCTaGATATCACACTTATCCAGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWRSSRI*ISHLSR
Trigger: CCTGGATAAGTGTGATATGCAGATTCTGGAGGAGCG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCTTTGGCAACCCACATaGAAAACTTCATGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLWQPT*KTSCVP
Trigger: GGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGACTTGCTTCTTATTTaGTGGACGCTGATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWDLLLI*WTLISL
Trigger: CAGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR GCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTAAACACAGTCACCTTTaGTCATCCAGGCTTTATCTC +
Preference number: 4 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFKHSHL*SSRLYL
Trigger: GAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTT...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACAGGAGGTGAGCATCTaGGAAGAGCTGACAAATTTG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTQEVSI*EELTNL
Trigger: CAAATTTGTCAGCTCTTCCCAGATGCTCACCTCCTG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCAAGCCAAGAGAGTGTaGCCTCTTTCCTGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGQAKRV*PLSCCC
Trigger: ACAACAACAGGAAAGAGGCCACACTCTCTTGGCTTG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCATATTGCCAGTGTTaGGACCAAGGTACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWAYCQC*DQGTLL
Trigger: AAGAAGGGTACCTTGGTCCCAACACTGGCAATATGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGCATATTGCCAGTGTTaGGACCAAGGTACCCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTAYCQC*DQGTLL
Trigger: AAGAAGGGTACCTTGGTCCCAACACTGGCAATATGC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTTACAGCAGGGAATTTaGCTTGTGCCAACACTCCAA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLLQQGI*LVPTLQ
Trigger: TTGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAAATCTAAACGTTCCTaGGCAATGAACTGGATGATT +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFKSKRS*AMNWMI
Trigger: AATCATCCAGTTCATTGCCCAGGAACGTTTAGATTT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAAATCTAAACGTTCCTaGGCAATGAACTGGATGATT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLKSKRS*AMNWMI
Trigger: AATCATCCAGTTCATTGCCCAGGAACGTTTAGATTT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTTCTTGGCATTAATTaGGCTATTTGGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFLGIN*AIWVHQ
Trigger: CTGGTGGACCCAAATAGCCCAATTAATGCCAAGAAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAAGGGTCCTGCCCACTaGCTGAATAAGATGAAAAGG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWKGPAH*LNKMKR
Trigger: CCTTTTCATCTTATTCAGCCAGTGGGCAGGACCCTT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTCCATTTCTCATTGTTaGCTAAAGCATTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLSISHC*LKHSKH
Trigger: ATGCTTGGAATGCTTTAGCCAACAATGAGAAATGGA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTTCCATGGTTTGAATaGTGTTGTTACGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLPWFE*CCYGTS
Trigger: ACTTGTGCCGTAACAACACCATTCAAACCATGGAAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCTTCCATGGTTTGAATaGTGTTGTTACGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLPWFE*CCYGTS
Trigger: ACTTGTGCCGTAACAACACCATTCAAACCATGGAAG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTACATCTTCTACCTCCTaGGTCATCTGTGGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGTSSTS*VICGRF
Trigger: AAACCTCCCACAGATGACCCAGGAGGTAGAAGATGT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGGAGGATGAGCTTCTaGTTTTTGAGGAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTRRMSF*FLRRGL
Trigger: AAGGCCTCTCCTCAAAAACCAGAAGCTCATCCTCCT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGATGGTTTATGTGGGATaGGTCCGTGAGACTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWMVYVG*VRETVL
Trigger: AAGGACAGTCTCACGGACCCATCCCACATAAACCAT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACCACCATGGATATTTTaGACACTGGTGTCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTPPWIF*TLVSAD
Trigger: GTCTGCTGACACCAGTGTCCAAAATATCCATGGTGG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCCTTTTCCAGCTCACTaGAACAAGGACGTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGPFPAH*NKDVGV
Trigger: AACTCCAACGTCCTTGTTCCAGTGAGCTGGAAAAGG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTCATCGGAGTCCTCATaGTGCATTTTATTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSSESS*CILFRL
Trigger: TAGCCTGAATAAAATGCACCATGAGGACTCCGATGA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCAGTGTAGTCGGCTTTaGTATGCAACGGAAGTCACT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWQCSRL*YATEVT
Trigger: AGTGACTTCCGTTGCATACCAAAGCCGACTACACTG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCACTTCTTTGTATCCCTaGGGAAGGCAATTAACATTA +
Preference number: 4 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFTSLYP*GRQLTL
Trigger: TAATGTTAATTGCCTTCCCCAGGGATACAAAGAAGT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGCTTTATTCTGCAGGTaGATACAAAGTGTATCATGT +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLALFCR*IQSVSC
Trigger: ACATGATACACTTTGTATCCACCTGCAGAATAAAGC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGCTTTATTCTGCAGGTaGATACAAAGTGTATCATGT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPALFCR*IQSVSC
Trigger: ACATGATACACTTTGTATCCACCTGCAGAATAAAGC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCTCACCGATGTTAGATaGGTTAGAGGTGGGAATGAC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLTDVR*VRGGND
Trigger: GTCATTCCCACCTCTAACCCATCTAACATCGGTGAG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
3UTR CAA 72 bp TACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTaGACCATCTTACAGTTTTCAGTGGCCAGCTTCATT +
Preference number: 4 (lower is better)
Translates to: YNSLFTYTGCQL*TILQFSVASFI
Trigger: AATGAAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTCTGTCTATTACAGGATaGAGTGGAATCTGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCLSITG*SGICFK
Trigger: TTTGAAACAGATTCCACTTCATCCTGTAATAGACAG...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACATTCCTGCATAAACTaGAGAGAGGCCTCAAAATCC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTHSCIN*REASKS
Trigger: GGATTTTGAGGCCTCTCTTCAGTTTATGCAGGAATG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCATTTGCGATGAGCTCTaGATTTCTGATTTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSICDEL*ISDFVG
Trigger: GCCAACAAAATCAGAAATTCAGAGCTCATCGCAAAT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAACGCTCGAATTTCCTTaGGTATTAAAACGGACAGTT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTTLEFP*VLKRTV
Trigger: AACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTAACTTAGCTGATCCATaGCATCAATCATCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGNLADP*HQSSAC
Trigger: ACAGGCCGATGATTGATGTCATGGATCAGCTAAGTT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAACTTAGCTGATCCATaGCATCAATCATCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWNLADP*HQSSAC
Trigger: ACAGGCCGATGATTGATGTCATGGATCAGCTAAGTT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAATGGAAGAACTTAGCTaGTCCATGACATCAATCATC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTMEELS*SMTSII
Trigger: GATGATTGATGTCATGGATCAGCTAAGTTCTTCCAT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACTTCTACCAATTCTCTaGAAACAAGGGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQLLPIL*KQGNLF
Trigger: GAACAAATTCCCTTGTTTTCAGAGAATTGGTAGAAG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAGTAATAATGGTAGATaGAGCGCCCAGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSNNGR*SAQSSR
Trigger: ACGAGAAGACTGGGCGCTTCATCTACCATTATTACT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAAAGGTCCATGTAGCTaGGAAGACTGTAGATCACCT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQKGPCS*EDCRSP
Trigger: AGGTGATCTACAGTCTTCTCAGCTACATGGACCTTT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAAGAAAACTCAGTTCATaGCGAATCTGTTCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQRKLSS*RICSFY
Trigger: GTAGAAAGAACAGATTCGTCATGAACTGAGTTTTCT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTAGTGCTAGAAAACAGTaGGACACAAGGAGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGSARKQ*DTRRHL
Trigger: AAGATGCCTCCTTGTGTCTCACTGTTTTCTAGCACT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGTAAGTTTCCACATCCTCTAATTACCATTGTCCAAGTACTGAACCTAAAAGAACAGCATTTCCCTAGGTaGTGTCGTTGTCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: GKFPHPLITIVQVLNLKEQHFPR*CRCLLA
Trigger: TGCTAACAGACAACGACATCACCTAGGGAAATGCTG...TTCTTTTAGGTTCAGTACTTGGACAATGGTAATTAGAGGATGTGGAAACTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR GCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGTTTTGGTCACTGTATaGTTCACAGTTAGAGATGCA +
Preference number: 4 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFVLVTV*FTVRDA
Trigger: TGCATCTCTAACTGTGAAGCATACAGTGACCAAAAC...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR GCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATCCTCAATGCCATTTTaGCTTTTATACCAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSSMPF*LLYQSN
Trigger: ATTTGACTGGTATAAAAGGCAAAATGGCATTGAGGA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTGTTGCCTTACAATTTaGAAGCCAAGAGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGCCLTI*KPRECG
Trigger: GCCACACTCTCTTGGCTTGCAAATTGTAAGGCAACA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGGTCTGCCACAATATaGATATTGCCAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTRSATI*ILPVLG
Trigger: TCCCAACACTGGCAATATGCATATTGTGGCAGACCT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAGGTCTGCCACAATATaGATATTGCCAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQRSATI*ILPVLG
Trigger: TCCCAACACTGGCAATATGCATATTGTGGCAGACCT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATGGGTTGAGACTGAATaGTTTTGCTGGTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQWVETE*FCWFSH
Trigger: GTGGGAAAACCAGCAAAAGCATTCAGTCTCAACCCA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGTAGCATCGGTCAATTaGCCAGTTAAAAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLVASVN*PVKKIY
Trigger: ATAAATCTTTTTAACTGGGCAATTGACCGATGCTAC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATTTGAAGCAGCCAGATaGAAGTTGGTAGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQFEAAR*KLVGTC
Trigger: ACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTTGAAGCAGCCAGATaGAAGTTGGTAGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGFEAAR*KLVGTC
Trigger: ACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTTTGCTTCAAGGATCTaGATGAGCTGCATGGAGATT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLFASRI*MSCMEI
Trigger: AATCTCCATGCAGCTCATGCAGATCCTTGAAGCAAA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGTATACAAAAAGCTTTaGTTCAAGGATCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQVYKKL*FKDLHE
Trigger: CTCATGCAGATCCTTGAAGCAAAGCTTTTTGTATAC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAATACTTCCCGGTCTTTaGTCAGCGACTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQILPGL*SATFFE
Trigger: CTCAAAGAAAGTCGCTGAGCAAAGACCGGGAAGTAT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTATACTTCCCGGTCTTTaGTCAGCGACTTTCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGILPGL*SATFFE
Trigger: CTCAAAGAAAGTCGCTGAGCAAAGACCGGGAAGTAT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCAATGGAAATTGCTGTTaGAAGAGAGGGCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSNGNCC*KRGQSR
Trigger: TCTTGATTGCCCTCTCTTGCAACAGCAATTTCCATT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTGCTGTTAGTTTACTaGTGGAGCTTAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLLLVY*WSLNLV
Trigger: CACCAGATTTAAGCTCCAGCAGTAAACTAACAGCAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTCCTGTGCTCTTTCTaGTTGCTGTTAGTTTACTGC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVLCSF*LLLVYC
Trigger: GCAGTAAACTAACAGCAAGCAGAAAGAGCACAGGAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACCCAATAGCGTGGGATaGATCCACCATGGATATTTT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQPNSVG*IHHGYF
Trigger: AAAATATCCATGGTGGATGCATCCCACGCTATTGGG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGGTAATGTCAGCATATaGTTCATGAAGGTATCGACA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTGNVSI*FMKVST
Trigger: TGTCGATACCTTCATGAAGCATATGCTGACATTACC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTAAGACTCTAAACTGCTaGTCGCTGTTTGTGTCATCC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGKTLNC*SLFVSS
Trigger: GGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTGAAGACTCTAAACTaGTGCTCGCTGTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLKTLN*CSLFVS
Trigger: TGACACAAACAGCGAGCAGCAGTTTAGAGTCTTCAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCGGAGTCCTCATGGTaGATTTTATTCAGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSESSW*ILFRLG
Trigger: TCCTAGCCTGAATAAAATGCACCATGAGGACTCCGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGTAGCGAGTTGCATATaGTCGGTCAAATGTAACACA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLVASCI*SVKCNT
Trigger: TGTGTTACATTTGACCGAGCATATGCAACTCGCTAC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTCTTCAGTAGCGAGTTaGATATGCTCGGTCAAATGT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSSVAS*ICSVKC
Trigger: ACATTTGACCGAGCATATGCAACTCGCTACTGAAGA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCTGGACCATTTTTGGTaGAAAGAGATCCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLDHFW*KEIQGF
Trigger: AAAGCCCTGGATCTCTTTGCACCAAAAATGGTCCAG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATGCAACAAGTTCACATaGACACATCTAACACTTGAC +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTCNKFT*THLTLD
Trigger: GTCAAGTGTTAGATGTGTGCATGTGAACTTGTTGCA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTGGATTGCTTTATTCTaGAGGTGGATACAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCWIALF*RWIQSV
Trigger: TACACTTTGTATCCACCTGCAGAATAAAGCAATCCA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTTCCAAAGATGTCATTaGGCCACAGACTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWFQRCH*ATDFCT
Trigger: AGTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTATATTCAGTAGTGTCTaGACCTCATCATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFIFSSV*TSSSEL
Trigger: CAGTTCTGATGATGAGGTCCAGACACTACTGAATAT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCATATTCAGTAGTGTCTaGACCTCATCATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSIFSSV*TSSSEL
Trigger: CAGTTCTGATGATGAGGTCCAGACACTACTGAATAT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTCATGACATTCTGTTTTaGTCACTGTATGCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFHDILF*SLYASQ
Trigger: CTGTGAAGCATACAGTGACCAAAACAGAATGTCATG...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTTACAGCAGGGAATTTaGCTTGTGCCAACACTCCAA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLQQGI*LVPTLQ
Trigger: TTGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTACAGCAGGGAATTTaGCTTGTGCCAACACTCCAA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLQQGI*LVPTLQ
Trigger: TTGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTCAAAATCCTCCACTaGATACATCTTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLKILH*IHLNSK
Trigger: TTTCGAATTAAGATGTATCCAGTGGAGGATTTTGAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACTCAAAATCCTCCACTaGATACATCTTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLKILH*IHLNSK
Trigger: TTTCGAATTAAGATGTATCCAGTGGAGGATTTTGAG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAAGAAAGTTCCAGCGTaGTGTCATACAGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWKKVPA*CHTGFP
Trigger: TGGAAAGCCTGTATGACACCACGCTGGAACTTTCTT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATGCAGATCCACATTGTaGGTGAGTGGTAATGTTGCT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQCRSTL*VSGNVA
Trigger: AGCAACATTACCACTCACCCACAATGTGGATCTGCA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTAGCATTTTCCATTTCTaGCCCAGGAACTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGSIFHF*PRNFIS
Trigger: GGAGATGAAGTTCCTGGGCCAGAAATGGAAAATGCT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCTTCCATGGTTTGAATaGTGTTGTTACGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLLPWFE*CCYGTS
Trigger: ACTTGTGCCGTAACAACACCATTCAAACCATGGAAG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCTGGGAAATTTTCCTaGCCAGCAACCACTGTATTG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSGKFS*PATTVL
Trigger: CAATACAGTGGTTGCTGGCCAGGAAAATTTCCCAGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGGTGTGATGTCTTCATaGCACCAAAGTGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTGVMSS*HQSGPN
Trigger: ATTTGGTCCACTTTGGTGCCATGAAGACATCACACC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAACTGGTGCTCCAGATaGAAGCCTGATTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQNWCSR*KPDLES
Trigger: AGATTCCAAATCAGGCTTCCATCTGGAGCACCAGTT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCCTTACAGAACTGATTaGGATTTTCAAAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLPYRTD*DFQNAE
Trigger: TTCAGCATTTTGAAAATCCCAATCAGTTCTGTAAGG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGAGAGGTCACTGTGCTaGTATGAAGGTAAAACAAGG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTERSLC*YEGKTR
Trigger: CCTTGTTTTACCTTCATACCAGCACAGTGACCTCTC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTCAATCCTACTTCTTaGCCACACAGAGAAAGGACA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLNPTS*PHRERT
Trigger: TGTCCTTTCTCTGTGTGGCCAAGAAGTAGGATTGAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAGTATTGCTACACGTTaGAAGTTCTGCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSIATR*KFCHPL
Trigger: AAGAGGATGGCAGAACTTCCAACGTGTAGCAATACT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTGGGGTTATTACTTTaGCAACCCACATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLGLLL*QPTCKT
Trigger: AGTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCCTAATTATAGGTTATaGAGAATTAGAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLPNYRL*RIRALT
Trigger: AGTGAGAGCTCTAATTCTCCATAACCTATAATTAGG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAATCTACCCTTTCCTTTaGTACTTCTACTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPIYPFL*YFYFFV
Trigger: TACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGAT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATCTACCCTTTCCTTTaGTACTTCTACTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNIYPFL*YFYFFV
Trigger: TACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAACAAAGAAATATCCTaGGTCATGATAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLNKEIS*VMIGIQ
Trigger: TTGGATACCTATCATGACCCAGGATATTTCTTTGTT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGTTTTCTTCCCTTCTTTaGTACCTATGTTGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: RCLLANTVTFAHPGFISLFSSLL*YLCCKR
Trigger: CCTCTTACAACATAGGTACCAAAGAAGGGAAGAAAA...CAAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAAGGAGGAGAACACATaGAATGTATACACAGCACAG +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTKEENT*NVYTAQ
Trigger: CTGTGCTGTGTATACATTTCATGTGTTCTCCTCCTT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAAGCTGATAATGCTTTaGACCACATATGGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWKLIML*TTYGFC
Trigger: GCAGAACCCATATGTGGTTCAAAGCATTATCAGCTT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGACGCTCGAATTTCCTTaGGTATTAAAACGGACAGTT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLTLEFP*VLKRTV
Trigger: AACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTGGTGTCAGAGGCCTTaGATAGAACAAGGTTTAACA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGWCQRP*IEQGLT
Trigger: TGTTAAACCTTGTTCTATTCAAGGCCTCTGACACCA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTATGTATTTCTATTTTTaGGAGGTCACTGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFMYFYF*EVTVLV
Trigger: TACCAGCACAGTGACCTCTCAAAAATAGAAATACAT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATGCATGCCTGACAGGTaGAAAGACTTGGAATTTATC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTCMPDR*KDLEFI
Trigger: GATAAATTCCAAGTCTTTTCACCTGTCAGGCATGCA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACCCAACAAAACTCTCTaGAAGTTGTCTACTGTGGTT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQPNKTL*KLSTVV
Trigger: AACCACAGTAGACAACTTTCAGAGAGTTTTGTTGGG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTATAGCCGACAAGATTTaGCTGGTAGATCTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFIADKI*LVDLKL
Trigger: TAACTTTAGATCTACCAGTCAAATCTTGTCGGCTAT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGTTCACGCATGTGTGTaGTGCCTACAATTAATTACA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLVHACV*CLQLIT
Trigger: TGTAATTAATTGTAGGCATCACACACATGCGTGAAC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCTTTTCCAGGGGCTCTaGCATAATGATACGAATCTT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLFQGL*HNDTNL
Trigger: AAGATTCGTATCATTATGGCAGAGCCCCTGGAAAAG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCCTCAATGCCATTTTaGCTTTTATACCAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCSSMPF*LLYQSN
Trigger: ATTTGACTGGTATAAAAGGCAAAATGGCATTGAGGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAGTATCCAAATATTCTTaGAGTTCTAACACACTGAAC +
Preference number: 4 (lower is better)
Translates to: RSPHERRVSASTKSVGHSVSKYS*SSNTLN
Trigger: GTTCAGTGTGTTAGAACTGCAAGAATATTTGGATAC...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGTATCCAAATATTCTTaGAGTTCTAACACACTGAAC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQVSKYS*SSNTLN
Trigger: GTTCAGTGTGTTAGAACTGCAAGAATATTTGGATAC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGTCTTTGACAGACTGTaGAAATATCCAGACATGGGA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQVFDRL*KYPDMG
Trigger: TCCCATGTCTGGATATTTGCACAGTCTGTCAAAGAC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGTAGCATCGGTCAATTaGCCAGTTAAAAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: YATEVTSSVASCICSVKCVASVN*PVKKIY
Trigger: ATAAATCTTTTTAACTGGGCAATTGACCGATGCTAC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGTAGCATCGGTCAATTaGCCAGTTAAAAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQVASVN*PVKKIY
Trigger: ATAAATCTTTTTAACTGGGCAATTGACCGATGCTAC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATTTGCTTCAAGGATCTaGATGAGCTGCATGGAGATT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQFASRI*MSCMEI
Trigger: AATCTCCATGCAGCTCATGCAGATCCTTGAAGCAAA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGTATACAAAAAGCTTTaGTTCAAGGATCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFVYKKL*FKDLHE
Trigger: CTCATGCAGATCCTTGAAGCAAAGCTTTTTGTATAC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCTCAATGAGCTTGTTTaGCTTCTCATCTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLNELV*LLICFS
Trigger: GCTGAAACAGATGAGAAGGCAAACAAGCTCATTGAG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTAGCGAGTTGCATATaGTCGGTCAAATGTAACACA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVASCI*SVKCNT
Trigger: TGTGTTACATTTGACCGAGCATATGCAACTCGCTAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGTAGCGAGTTGCATATaGTCGGTCAAATGTAACACA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQVASCI*SVKCNT
Trigger: TGTGTTACATTTGACCGAGCATATGCAACTCGCTAC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGAAGTTGAAAACAGAATaGCATGGAGAAAGGGAAATT +
Preference number: 4 (lower is better)
Translates to: RCLLANTVTFAHPGFISLKLKTE*HGEREI
Trigger: AATTTCCCTTTCTCCATGGCATTCTGTTTTCAACTT...CAAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CCA 90 bp AAATATTCTTGCAGTTCTAACACACTGAACTTGAGCTTGTCCAGAAGTCCACATGCATTCAAAAGCTGCTaGGAGTTCATTGATGGAACT +
Preference number: 4 (lower is better)
Translates to: KYSCSSNTLNLSLSRSPHAFKSC*EFIDGT
Trigger: AGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGC...ATGTGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGAACTGCAAGAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAATCTAAACGTTCCTaGGCAATGAACTGGATGATT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKSKRS*AMNWMI
Trigger: AATCATCCAGTTCATTGCCCAGGAACGTTTAGATTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTCTTCGGTGGTGAACTaGAACACACTGAATCAAGTT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSSVVN*NTLNQV
Trigger: AACTTGATTCAGTGTGTTCCAGTTCACCACCGAAGA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTTCCATGGTTTGAATaGTGTTGTTACGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLPWFE*CCYGTS
Trigger: ACTTGTGCCGTAACAACACCATTCAAACCATGGAAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTGTTAGTTTACTGCTaGAGCTTAAATCTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLLVYC*SLNLVR
Trigger: CCTCACCAGATTTAAGCTCCAGCAGTAAACTAACAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAACAAGATTTGAAAGTTTaGGGTTCTTCTCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: EGVILLNISHSMSLPCPQQDLKV*GSSLLN
Trigger: GTTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTG...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTCATCGGAGTCCTCATaGTGCATTTTATTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSSESS*CILFRL
Trigger: TAGCCTGAATAAAATGCACCATGAGGACTCCGATGA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCATCGGAGTCCTCATaGTGCATTTTATTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSSESS*CILFRL
Trigger: TAGCCTGAATAAAATGCACCATGAGGACTCCGATGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGTATTGCTACACGTTaGAAGTTCTGCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSIATR*KFCHPL
Trigger: AAGAGGATGGCAGAACTTCCAACGTGTAGCAATACT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCTTACAGTTTTCAGTaGCCAGCTTCATTTTGCCTG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSYSFQ*PASFCL
Trigger: CAGGCAAAATGAAGCTGGCCACTGAAAACTGTAAGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTGTTCTTTCTACTGTaGCTCCCAACAAAACTCTCT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLFFLL*LPTKLS
Trigger: AGAGAGTTTTGTTGGGAGCCACAGTAGAAAGAACAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGAATGCTCTTTTCCTTaGATATCCATTGTATCCTCA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSECSFP*ISIVSS
Trigger: TGAGGATACAATGGATATCCAAGGAAAAGAGCATTC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGAATGCTCTTTTCCTTaGATATCCATTGTATCCTCA +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTECSFP*ISIVSS
Trigger: TGAGGATACAATGGATATCCAAGGAAAAGAGCATTC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGTAAGTTTCCACATCCTCTAATTACCATTGTCCAAGTACTGAACCTAAAAGAAAACTGGAAATATGGATaGTCTCTTCTTCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GKFPHPLITIVQVLNLKENWKYG*SLLRVP
Trigger: AGGCACCCGAAGAAGAGACCATCCATATTTCCAGTT...TTCTTTTAGGTTCAGTACTTGGACAATGGTAATTAGAGGATGTGGAAACTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCTGTCTATTACAGGATaGAGTGGAATCTGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLLSITG*SGICFK
Trigger: TTTGAAACAGATTCCACTTCATCCTGTAATAGACAG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAATAAGTTCAAGTTTTaGCATCCCATCAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWNKFKF*HPIRKQ
Trigger: CTGCTTCCTGATGGGATGTCAAAACTTGAACTTATT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAATTCATCATCCATATaGATAGAGAGCCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTNSSSI*IESLAS
Trigger: ACTGGCTAGGCTCTCTATTCATATGGATGATGAATT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAATTCATCATCCATATaGATAGAGAGCCTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWNSSSI*IESLAS
Trigger: ACTGGCTAGGCTCTCTATTCATATGGATGATGAATT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGACGCTCGAATTTCCTTaGGTATTAAAACGGACAGTT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWTLEFP*VLKRTV
Trigger: AACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCTTCTACCAATTCTCTaGAAACAAGGGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLLLPIL*KQGNLF
Trigger: GAACAAATTCCCTTGTTTTCAGAGAATTGGTAGAAG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCTCAGCGACTTTCTTTaGGTATACAAAAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLSDFL*VYKKLC
Trigger: GCAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCTTCTAAACAAACCTaGGCAATCCTTTCGGCTATA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSSKQT*AILSAI
Trigger: TATAGCCGAAAGGATTGCTCAGGTTTGTTTAGAAGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGATAGCCGACAAGATTTaGCTGGTAGATCTAAAGTTA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLIADKI*LVDLKL
Trigger: TAACTTTAGATCTACCAGTCAAATCTTGTCGGCTAT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATACAAGGCCAAGGAATaGTTCTTTCGAGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQYKAKE*FFREES
Trigger: ACTTTCTTCTCGAAAGAAGCATTCCTTGGCCTTGTA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGTAATATAAGGACATaGCTATCATTTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSNIRT*LSFWLP
Trigger: AGGAAGCCAAAATGATAGGCATGTCCTTATATTACT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCATTGCACTAAAATGTaGCCGGATATCTTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFHCTKM*PDIFKN
Trigger: ATTCTTAAAGATATCCGGGCACATTTTAGTGCAATG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCATTGCACTAAAATGTaGCCGGATATCTTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSHCTKM*PDIFKN
Trigger: ATTCTTAAAGATATCCGGGCACATTTTAGTGCAATG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAATGGAAATTGCTGTTaGAAGAGAGGGCAATCAAGA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQNGNCC*KRGQSR
Trigger: TCTTGATTGCCCTCTCTTGCAACAGCAATTTCCATT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATTGCTGTTAGTTTACTaGTGGAGCTTAAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLLLVY*WSLNLV
Trigger: CACCAGATTTAAGCTCCAGCAGTAAACTAACAGCAA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATGTTTAGTTGTCCTGTaGTCTTTCTGCTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQCLVVL*SFCLLL
Trigger: TAACAGCAAGCAGAAAGAGCACAGGACAACTAAACA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATGCAACAAGTTCACATaGACACATCTAACACTTGAC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQCNKFT*THLTLD
Trigger: GTCAAGTGTTAGATGTGTGCATGTGAACTTGTTGCA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGATATTCAGTAGTGTCTaGACCTCATCATCAGAACTG +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWIFSSV*TSSSEL
Trigger: CAGTTCTGATGATGAGGTCCAGACACTACTGAATAT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTCAAAATCCTCCACTaGATACATCTTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLKILH*IHLNSK
Trigger: TTTCGAATTAAGATGTATCCAGTGGAGGATTTTGAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCCTTACAGAACTGATTaGGATTTTCAAAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSPYRTD*DFQNAE
Trigger: TTCAGCATTTTGAAAATCCCAATCAGTTCTGTAAGG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTTGGGGTTATTACTTTaGCAACCCACATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLGLLL*QPTCKT
Trigger: AGTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTGGGGTTATTACTTTaGCAACCCACATGCAAAACT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLGLLL*QPTCKT
Trigger: AGTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATTGATTACAGAGAATTaGTTGAAGCTCACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTLITEN*LKLTVL
Trigger: CAAAACTGTGAGCTTCAACCAATTCTCTGTAATCAA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGAAAGTTGTCTACTGTaGTTAGCCACAGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQESCLL*LATETF
Trigger: AAAGGTTTCTGTGGCTAACCACAGTAGACAACTTTC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGAAAGTTGTCTACTGTaGTTAGCCACAGAAACCTTT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTESCLL*LATETF
Trigger: AAAGGTTTCTGTGGCTAACCACAGTAGACAACTTTC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGACTTCTTTGTATCCCTaGGGAAGGCAATTAACATTA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLTSLYP*GRQLTL
Trigger: TAATGTTAATTGCCTTCCCCAGGGATACAAAGAAGT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCAACAAAGAAATATCCTaGGTCATGATAGGTATCCAA +
Preference number: 4 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSNKEIS*VMIGIQ
Trigger: TTGGATACCTATCATGACCCAGGATATTTCTTTGTT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGAATGCTCTTTTCCTTaGATATCCATTGTATCCTCA +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLECSFP*ISIVSS
Trigger: TGAGGATACAATGGATATCCAAGGAAAAGAGCATTC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTCGCATGTTCCAGCATACTGGTAGACCTATTTATTGTAACCAACGATATTCCAAGAGATGCAATGAACTaGAAATATGGATGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LACSSILVDLFIVTNDIPRDAMN*KYGWSL
Trigger: AAGAGACCATCCATATTTCCAGTTCATTGCATCTCT...TGGAATATCGTTGGTTACAATAAATAGGTCTACCAGTATGCTGGAACATGCGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGAGAAATGGAAGTTCTaGCCTTTGTTTTTCTCATAT +
Preference number: 4 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFEKWKF*PLFFSY
Trigger: ATATGAGAAAAACAAAGGCCAGAACTTCCATTTCTC...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CCA 90 bp TCGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTTATCTCTTTGAGAAATaGAAGTTCTGGCCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SLSVSKHSHLCSSRLYLFYLFEK*KFWPLF
Trigger: AAACAAAGGCCAGAACTTCCATTTCTCAAAGAGATA...AAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
3UTR CAA 72 bp TGGTTGATTACAGAGAATTGGTTGAAGCTCACAGTTTaGATGCCAACTTCCAAAGAGATAATACTTACCTCC +
Preference number: 4 (lower is better)
Translates to: WLITENWLKLTV*MPTSKEIILTS
Trigger: GGAGGTAAGTATTATCTCTTTGGAAGTTGGCATCAAAACTGTGAGCTTCAACCAATTCTCTGTAATCAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTTCTACCAATTCTCTaGAAACAAGGGAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLLPIL*KQGNLF
Trigger: GAACAAATTCCCTTGTTTTCAGAGAATTGGTAGAAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAATGTATTTCTATTTTTaGGAGGTCACTGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTMYFYF*EVTVLV
Trigger: TACCAGCACAGTGACCTCTCAAAAATAGAAATACAT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAATGTATTTCTATTTTTaGGAGGTCACTGTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQMYFYF*EVTVLV
Trigger: TACCAGCACAGTGACCTCTCAAAAATAGAAATACAT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGAAAGACGGCATAAATaGGATTGTTACATGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQERRHK*DCYMFL
Trigger: GAGAAACATGTAACAATCTCATTTATGCCGTCTTTC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR TCA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAGAAAACTCAGTTCATaGCGAATCTGTTCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWRKLSS*RICSFY
Trigger: GTAGAAAGAACAGATTCGTCATGAACTGAGTTTTCT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTGATTCATCCTCAATaGCATTTTGCCTTTTATACC +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTVIHPQ*HFAFYT
Trigger: GGTATAAAAGGCAAAATGGCATTGAGGATGAATCAC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGAGTAATATAAGGACATaGCTATCATTTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSNIRT*LSFWLP
Trigger: AGGAAGCCAAAATGATAGGCATGTCCTTATATTACT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCATTGCACTAAAATGTaGCCGGATATCTTTAAGAAT +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLHCTKM*PDIFKN
Trigger: ATTCTTAAAGATATCCGGGCACATTTTAGTGCAATG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTGGATTGCTTTATTCTaGAGGTGGATACAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGWIALF*RWIQSV
Trigger: TACACTTTGTATCCACCTGCAGAATAAAGCAATCCA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CTCGCATGTTCCAGCATACTGGTAGACCTATTTATTGTAACCAACGATATTCCACAAAATATGTTCACATaGCTATATGTAGGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LACSSILVDLFIVTNDIPQNMFT*LYVGFL
Trigger: CAGAAAGCCTACATATAGGCATGTGAACATATTTTG...TGGAATATCGTTGGTTACAATAAATAGGTCTACCAGTATGCTGGAACATGCGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAAATCTAAACGTTCCTaGGCAATGAACTGGATGATT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTKSKRS*AMNWMI
Trigger: AATCATCCAGTTCATTGCCCAGGAACGTTTAGATTT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCCATTTCTCATTGTTaGCTAAAGCATTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSISHC*LKHSKH
Trigger: ATGCTTGGAATGCTTTAGCCAACAATGAGAAATGGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTCCATTTCTCATTGTTaGCTAAAGCATTCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGSISHC*LKHSKH
Trigger: ATGCTTGGAATGCTTTAGCCAACAATGAGAAATGGA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCAAGATTTGAAAGTTTaGGGTTCTTCTCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: GGIFLITEASVKYLPFPLQDLKV*GSSLLN
Trigger: GTTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAACTTCTTTGTATCCCTaGGGAAGGCAATTAACATTA +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTTSLYP*GRQLTL
Trigger: TAATGTTAATTGCCTTCCCCAGGGATACAAAGAAGT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGCTTTATTCTGCAGGTaGATACAAAGTGTATCATGT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGALFCR*IQSVSC
Trigger: ACATGATACACTTTGTATCCACCTGCAGAATAAAGC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGTAAGTTTCCACATCCTCTAATTACCATTGTCCAAGTACTGAACCTAAAAGAAAATGAACTGGAAATATaGATGGTCTCTTCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: GKFPHPLITIVQVLNLKENELEI*MVSSSG
Trigger: ACCCGAAGAAGAGACCATCCATATTTCCAGTTCATT...TTCTTTTAGGTTCAGTACTTGGACAATGGTAATTAGAGGATGTGGAAACTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCCTCAATGCCATTTTaGCTTTTATACCAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSSMPF*LLYQSN
Trigger: ATTTGACTGGTATAAAAGGCAAAATGGCATTGAGGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGTAATATAAGGACATaGCTATCATTTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSNIRT*LSFWLP
Trigger: AGGAAGCCAAAATGATAGGCATGTCCTTATATTACT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR GCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAGTAATATAAGGACATaGCTATCATTTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSNIRT*LSFWLP
Trigger: AGGAAGCCAAAATGATAGGCATGTCCTTATATTACT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTCAAAATCCTCCACTaGATACATCTTAATTCGAAA +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLKILH*IHLNSK
Trigger: TTTCGAATTAAGATGTATCCAGTGGAGGATTTTGAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCCTTACAGAACTGATTaGGATTTTCAAAATGCTGAA +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGPYRTD*DFQNAE
Trigger: TTCAGCATTTTGAAAATCCCAATCAGTTCTGTAAGG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACAAGATTTGAAAGTTTaGGGTTCTTCTCTTCTAAAC +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQQDLKV*GSSLLN
Trigger: GTTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCCTAATTATAGGTTATaGAGAATTAGAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGPNYRL*RIRALT
Trigger: AGTGAGAGCTCTAATTCTCCATAACCTATAATTAGG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACCTAATTATAGGTTATaGAGAATTAGAGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQPNYRL*RIRALT
Trigger: AGTGAGAGCTCTAATTCTCCATAACCTATAATTAGG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CCA 90 bp GGTAAGTTTCCACATCCTCTAATTACCATTGTCCAAGTACTGAACCTAAAAGAACAAGGTAAAAACCTTTaGCCAACCAATACAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GKFPHPLITIVQVLNLKEQGKNL*PTNTVD
Trigger: ATCTACTGTATTGGTTGGCCAAAGGTTTTTACCTTG...TTCTTTTAGGTTCAGTACTTGGACAATGGTAATTAGAGGATGTGGAAACTTACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS GCA 90 bp GCGCTGGAGCCCCGGGAACCTGGTGCCGCCACCGCCTGCGCTCCCTaGGCTGCGCTGCGCTCGCTGCGCCCGGGCTCTGCTGCCCGGCGA +
Preference number: 5 (lower is better)
Translates to: ALEPREPGAATACAP*AALRSLRPGSAARR
Trigger: TCGCCGGGCAGCAGAGCCCGGGCGCAGCGAGCGCAGCGCAGCGCAGGGAGCGCAGGCGGTGGCGGCACCAGGTTCCCGGGGCTCCAGCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645780.1
CDS TCA 90 bp GGATCGGCTTTCTTCTGGGAGGGAGGGTTTCTAGGCCGGCCTCCCTaGCGCGGTGCAGGCAGCCTCCGGCCCACACGGCCGCCGCGGGGC +
Preference number: 5 (lower is better)
Translates to: GSAFFWEGGFLGRPP*RGAGSLRPTRPPRG
Trigger: GCCCCGCGGCGGCCGTGTGGGCCGGAGGCTGCCTGCACCGCGTCAGGGAGGCCGGCCTAGAAACCCTCCCTCCCAGAAGAAAGCCGATCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS GCA 90 bp TTTCTTCTGGGAGGGAGGGTTTCTAGGCCGGCCTCCCTGACGCGGTaGAGGCAGCCTCCGGCCCACACGGCCGCCGCGGGGCTAAGGGAT +
Preference number: 5 (lower is better)
Translates to: FLLGGRVSRPASLTR*RQPPAHTAAAGLRD
Trigger: ATCCCTTAGCCCCGCGGCGGCCGTGTGGGCCGGAGGCTGCCTGCACCGCGTCAGGGAGGCCGGCCTAGAAACCCTCCCTCCCAGAAGAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS GCA 90 bp GCTCGGCCGCTCCTCCTCCTCCGGGTCCAGGACTTGCTTCTTATTTaGTGGACGCTGATCTCCCTGCAGCCCTCGGAGGCGGCGGCCGCG +
Preference number: 5 (lower is better)
Translates to: ARPLLLLRVQDLLLI*WTLISLQPSEAAAA
Trigger: CGCGGCCGCCGCCTCCGAGGGCTGCAGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTCCTGGACCCGGAGGAGGAGGAGCGGCCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS CCA 90 bp GCCCGAATCCTGCTGGCTGGCCATGTCTGCGGCATACAAAGAGGCTaGGAGGACGGGCAGCGGCCGGGAGCAGGTACCGGGCGTGATGCG +
Preference number: 5 (lower is better)
Translates to: ARILLAGHVCGIQRG*EDGQRPGAGTGRDA
Trigger: CGCATCACGCCCGGTACCTGCTCCCGGCCGCTGCCCGTCCTCCCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS CCA 90 bp CGGCCGCTCCTCCTCCTCCGGGTCCAGGACTTGCTTCTTATTTGCTaGACGCTGATCTCCCTGCAGCCCTCGGAGGCGGCGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: RPLLLLRVQDLLLIC*TLISLQPSEAAAAL
Trigger: CAGCGCGGCCGCCGCCTCCGAGGGCTGCAGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTCCTGGACCCGGAGGAGGAGGAGCGGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS GCA 90 bp GCCCAGAGGCAGCTCTGCGGATCCACCTCCGGCTCCGGCCGGGAGTaGTCATCTAAAGGACACGGCGGAGCAGAGAGAGATGCTCGGCCG +
Preference number: 5 (lower is better)
Translates to: AQRQLCGSTSGSGRE*SSKGHGGAERDARP
Trigger: CGGCCGAGCATCTCTCTCTGCTCCGCCGTGTCCTTTAGATGAGCACTCCCGGCCGGAGCCGGAGGTGGATCCGCAGAGCTGCCTCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS TCA 90 bp ATGTGGCTGCGCCAGGCCTCCTCGGCATCGTCACAGGCTGCGGGCTaGAAGGCGGCAAGGATGGCTGAGAAGAAGGGCGAGGGAGGGGGA +
Preference number: 5 (lower is better)
Translates to: MWLRQASSASSQAAG*KAARMAEKKGEGGG
Trigger: TCCCCCTCCCTCGCCCTTCTTCTCAGCCATCCTTGCCGCCTTTCAGCCCGCAGCCTGTGACGATGCCGAGGAGGCCTGGCGCAGCCACAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp ACAGGTTGTGATGTCAGCGCGGGGTCAGGCGCCCAGAGGCAGCTCTaGGGATCCACCTCCGGCTCCGGCCGGGAGTGCTCATCTAAAGGA +
Preference number: 5 (lower is better)
Translates to: TGCDVSAGSGAQRQL*GSTSGSGRECSSKG
Trigger: TCCTTTAGATGAGCACTCCCGGCCGGAGCCGGAGGTGGATCCGCAGAGCTGCCTCTGGGCGCCTGACCCCGCGCTGACATCACAACCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS CCA 90 bp GTGAGAAGCAGTCACGTCACCTTCCCGGTCCTTGACTTCGTCCTCTaGGCTGCTGGGGCTCGACCCCGGGAGGAGGAGCCTGCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: VRSSHVTFPVLDFVL*AAGARPREEEPAVH
Trigger: GTGGACAGCAGGCTCCTCCTCCCGGGGTCGAGCCCCAGCAGCCCAGAGGACGAAGTCAAGGACCGGGAAGGTGACGTGACTGCTTCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TCCTCCTCCTCCGGGTCCAGGACTTGCTTCTTATTTGCTGGACGCTaGTCTCCCTGCAGCCCTCGGAGGCGGCGGCCGCGCTGCTTTCAT +
Preference number: 5 (lower is better)
Translates to: SSSSGSRTCFLFAGR*SPCSPRRRRPRCFH
Trigger: ATGAAAGCAGCGCGGCCGCCGCCTCCGAGGGCTGCAGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTCCTGGACCCGGAGGAGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGGCTCCGTTCGGCAGTaGCGGTGTTGCCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGGSVRQ*RCCRWW
Trigger: CCACCAGCGGCAACACCGCAACTGCCGAACGGAGCC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp ACCAGCTCGGCTCCAGCCAGGTACGCAACCGAGGAAGACCCCACCTaGACTGGGATCGGCTTTCTTCTGGGAGGGAGGGTTTCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: TSSAPARYATEEDPT*TGIGFLLGGRVSRP
Trigger: CGGCCTAGAAACCCTCCCTCCCAGAAGAAAGCCGATCCCAGTTCAGGTGGGGTCTTCCTCGGTTGCGTACCTGGCTGGAGCCGAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS TCA 90 bp GGGCCTTTTCCAGCTCACTGGAACAAGGACGTTGGAGTTGGAGCCTaGGGAAGTGGAAGATGTGCTCCGGGTGACGGCCATGGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPFPAHWNKDVGVGA*GSGRCAPGDGHGPG
Trigger: CCCAGGGCCATGGCCGTCACCCGGAGCACATCTTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAGTGAGCTGGAAAAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GATACTGATCTCAAAGAAGCCCGAATCCTGCTGGCTGGCCATGTCTaGGGCATACAAAGAGGCTGGGAGGACGGGCAGCGGCCGGGAGCA +
Preference number: 5 (lower is better)
Translates to: DTDLKEARILLAGHV*GIQRGWEDGQRPGA
Trigger: TGCTCCCGGCCGCTGCCCGTCCTCCCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTTTGAGATCAGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGGCTCCGTTCGGCAGTaGCGGTGTTGCCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVGSVRQ*RCCRWW
Trigger: CCACCAGCGGCAACACCGCAACTGCCGAACGGAGCC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp GGCTGCTTCAGTGGACGTGAAGGTGGGCTCGGACCACGCGCCGTCTaGATAGAGAGGGTCAGCTGCAATGACTGCACTGGCTTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: GCFSGREGGLGPRAV*IERVSCNDCTGFLQ
Trigger: CTGAAGGAAGCCAGTGCAGTCATTGCAGCTGACCCTCTCTATTCAGACGGCGCGTGGTCCGAGCCCACCTTCACGTCCACTGAAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TCTTCAGGCACTCCAGCATGGACTGGATGGCTGCTTCAGTGGACGTaGAGGTGGGCTCGGACCACGCGCCGTCTGAATAGAGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SSGTPAWTGWLLQWT*RWARTTRRLNREGQ
Trigger: CTGACCCTCTCTATTCAGACGGCGCGTGGTCCGAGCCCACCTTCACGTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGTGCCTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp GGACGTTGGAGTTGGAGCCTGAGGAAGTGGAAGATGTGCTCCGGGTaGCGGCCATGGCCCTGGGCTTCCCATCACGCCCAGAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: GRWSWSLRKWKMCSG*RPWPWASHHAQKNS
Trigger: AGAATTCTTCTGGGCGTGATGGGAAGCCCAGGGCCATGGCCGTCACCCGGAGCACATCTTCCACTTCCTCAGGCTCCAACTCCAACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GTCAGGTCTGTGGTGGTGAGGGATGTGAATCCTTTCAGCAGCAGCTaGTGCAGCCCGGAGAAGTCGGCCCACTTCAGCTGTGCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: VRSVVVRDVNPFSSS*CSPEKSAHFSCAWS
Trigger: ACTCCAGGCACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGGATTCACATCCCTCACCACCACAGACCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCTGCTGCGGAAGCCTaGCTACTGGCCGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCAAAEA*LLAVKR
Trigger: CCGCTTCACGGCCAGTAGCAAGGCTTCCGCAGCAGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CGGCATCGTCACAGGCTGCGGGCTCGCCAGGGTAAACTGGTCCAGTaGCCGATTGCCTTTTTCTTCCCCCTCAGTCATGTCCAGGCTAAA +
Preference number: 5 (lower is better)
Translates to: RHRHRLRARQGKLVQ*PIAFFFPLSHVQAK
Trigger: TTTAGCCTGGACATGACTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAGCCCGCAGCCTGTGACGATGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS GCA 90 bp AGGTCTGTGGTGGTGAGGGATGTGAATCCTTTCAGCAGCAGCTGCTaGAGCCCGGAGAAGTCGGCCCACTTCAGCTGTGCCTGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: RSVVVRDVNPFSSSC*SPEKSAHFSCAWSF
Trigger: GAAACTCCAGGCACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGGATTCACATCCCTCACCACCACAGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp AAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTaGCAGTTTGGAACCCAGTGGGGACAGGAGGCTCCTGTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: KAEKTLNDVAPAWQH*QFGTQWGQEAPVRD
Trigger: GTCTCTGACAGGAGCCTCCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCAGAGGCATGTCCCTaGGTACCACACCGCGGGACC +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSEACP*VPHRGT
Trigger: GGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGGGGAAAGGCCCACATaGTCAAAGACAGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGGERPT*SKTGPQ
Trigger: CTGTGGCCCTGTCTTTGACAATGTGGGCCTTTCCCC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp CTTGAGCAAGGCCTGCCTGAGAAGCAGCTATTTAAGGAAGCTGCGTaGCCAGATGGGCAGGGGTGTGGCCAGCTGAGTGGCTGTGACACA +
Preference number: 5 (lower is better)
Translates to: LEQGLPEKQLFKEAA*PDGQGCGQLSGCDT
Trigger: TGTGTCACAGCCACTCAGCTGGCCACACCCCTGCCCATCTGGTCACGCAGCTTCCTTAAATAGCTGCTTCTCAGGCAGGCCTTGCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS TCA 90 bp GATCGGTCGATGACACCAAACTTCTTGGGCACAGAGAAGCTTCGTTaGTGCCGGCTCCGTTCGGCAGTTGCGGTGTTGCCGCTGGTGGTT +
Preference number: 5 (lower is better)
Translates to: DRSMTPNFLGTEKLR*CRLRSAVAVLPLVV
Trigger: AACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCATCGACCGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CAGAGAAGCTTCGTTGATGCCGGCTCCGTTCGGCAGTTGCGGTGTTaGCGCTGGTGGTTCCCGGGTTCATGTTTAGTTGTCCTGTGCTCT +
Preference number: 5 (lower is better)
Translates to: QRSFVDAGSVRQLRC*RWWFPGSCLVVLCS
Trigger: AGAGCACAGGACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CAGCAGCAGCTGCTGCAGCCCGGAGAAGTCGGCCCACTTCAGCTGTaGCTGGAGTTTCTCAAGCTTTTCTCGGTTCTCAGCCTTATCGAG +
Preference number: 5 (lower is better)
Translates to: QQQLLQPGEVGPLQL*LEFLKLFSVLSLIE
Trigger: CTCGATAAGGCTGAGAACCGAGAAAAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCAGCAGCTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp AAAGCTTTGCCGAGTTCGTTGTTCTTCAGGCACTCCAGCATGGACTaGATGGCTGCTTCAGTGGACGTGAAGGTGGGCTCGGACCACGCG +
Preference number: 5 (lower is better)
Translates to: KALPSSLFFRHSSMD*MAASVDVKVGSDHA
Trigger: CGCGTGGTCCGAGCCCACCTTCACGTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGTGCCTGAAGAACAACGAACTCGGCAAAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp AGCTTCGTTGATGCCGGCTCCGTTCGGCAGTTGCGGTGTTGCCGCTaGTGGTTCCCGGGTTCATGTTTAGTTGTCCTGTGCTCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: SFVDAGSVRQLRCCR*WFPGSCLVVLCSFC
Trigger: GCAGAAAGAGCACAGGACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp AGCAGCTGCTGCAGCCCGGAGAAGTCGGCCCACTTCAGCTGTGCCTaGAGTTTCTCAAGCTTTTCTCGGTTCTCAGCCTTATCGAGTGGC +
Preference number: 5 (lower is better)
Translates to: SSCCSPEKSAHFSCA*SFSSFSRFSALSSG
Trigger: GCCACTCGATAAGGCTGAGAACCGAGAAAAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCAGCAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCTTTGCCGAGTTCGTaGTTCTTCAGGCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGALPSS*FFRHSS
Trigger: GCTGGAGTGCCTGAAGAACAACGAACTCGGCAAAGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACTGTCTGGGTCCACATaGATGGGTAGCATGGTTGGC +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLSGST*MGSMVG
Trigger: GCCAACCATGCTACCCATCAATGTGGACCCAGACAG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCCCGTTGGGGTGTGTaGTGGGGAATCGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCARWGV*WGIAGL
Trigger: TAAGCCAGCGATTCCCCACAACACACCCCAACGGGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp GCCCTTTCTCCCTGTGCGTGCCAGAAGCAGGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGGGAGAAGCTGGAAATATGGATGGTC +
Preference number: 5 (lower is better)
Translates to: ALSPCACQKQVEPEA*CNRCQREKLEIWMV
Trigger: GACCATCCATATTTCCAGCTTCTCCCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACGCACAGGGAGAAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GTGACGGCCATGGCCCTGGGCTTCCCATCACGCCCAGAAGAATTCTaGAGCTCATCATACCGCCTCCCGATGATTGGAGTCTCCGAAATA +
Preference number: 5 (lower is better)
Translates to: VTAMALGFPSRPEEF*SSSYRLPMIGVSEI
Trigger: TATTTCGGAGACTCCAATCATCGGGAGGCGGTATGATGAGCTGCAGAATTCTTCTGGGCGTGATGGGAAGCCCAGGGCCATGGCCGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp TTCGTTGATGCCGGCTCCGTTCGGCAGTTGCGGTGTTGCCGCTGGTaGTTCCCGGGTTCATGTTTAGTTGTCCTGTGCTCTTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FVDAGSVRQLRCCRW*FPGSCLVVLCSFCL
Trigger: CAAGCAGAAAGAGCACAGGACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp TCAGAGGGGGAGAGAGTCATGATTAGGTCTGAGTGCTCCAGGATCTaGCTGGCTGTGAGGTCCTCCTCCTCGGATGATTCATCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SEGERVMIRSECSRI*LAVRSSSSDDSSES
Trigger: GGACTCCGATGAATCATCCGAGGAGGAGGACCTCACAGCCAGCCAGATCCTGGAGCACTCAGACCTAATCATGACTCTCTCCCCCTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCAGCCAGATGCAAGTaGGTAGGAACCTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGAARCK*VGTCVA
Trigger: TGCTACACAGGTTCCTACCAACTTGCATCTGGCTGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAACTGGAACAAGGACGTaGGAGTTGGAGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGTGTRT*ELEPEE
Trigger: TTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAGT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TTCTGTCCAGTGTGGCACTTCGAGGTGGGTCAGAGGATCGGTCGATaGCACCAAACTTCTTGGGCACAGAGAAGCTTCGTTGATGCCGGC +
Preference number: 5 (lower is better)
Translates to: FCPVWHFEVGQRIGR*HQTSWAQRSFVDAG
Trigger: GCCGGCATCAACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCATCGACCGATCCTCTGACCCACCTCGAAGTGCCACACTGGACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCTTTGCCGAGTTCGTaGTTCTTCAGGCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCALPSS*FFRHSS
Trigger: GCTGGAGTGCCTGAAGAACAACGAACTCGGCAAAGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCWSSAR*PFSSPS
Trigger: TGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGAAGAGCTGACAAATTaGGATCCGATTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPEELTN*DPIPRR
Trigger: CCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCCACAATATGCATATaGCCAGTGTTGGGACCAAGG +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGATICI*PVLGPR
Trigger: CCTTGGTCCCAACACTGGCAATATGCATATTGTGGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGCAGGGAATTTGGCTaGTGCCAACACTCCAATGAC +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGSREFG*CQHSND
Trigger: GTCATTGGAGTGTTGGCACAAGCCAAATTCCCTGCT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCAAGGGCTGCGGCTGCTaGGTCTCTGTAATAGTCAGC +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVKGCGC*VSVIVS
Trigger: GCTGACTATTACAGAGACCAAGCAGCCGCAGCCCTT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAATAGAGATATTCAGGTaGGTAGGCTGGCTGCACGGT +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGIEIFR*VGWLHG
Trigger: ACCGTGCAGCCAGCCTACCAACCTGAATATCTCTAT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTCGGCAGTTGCGGTGTaGCCGCTGGTGGTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNSAVAV*PLVVPG
Trigger: CCCGGGAACCACCAGCGGCAACACCGCAACTGCCGA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATGGTGGCCAGCAGGTaGGTGGGATGGTTTATGTGG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCMVASR*VGWFMW
Trigger: CCACATAAACCATCCCACCAACCTGCTGGCCACCAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TGGGCTCGGACCACGCGCCGTCTGAATAGAGAGGGTCAGCTGCAATaGCTGCACTGGCTTCCTTCAGGTGTTTCTTTAGGTCACTCAGTT +
Preference number: 5 (lower is better)
Translates to: WARTTRRLNREGQLQ*LHWLPSGVSLGHSV
Trigger: AACTGAGTGACCTAAAGAAACACCTGAAGGAAGCCAGTGCAGTCATTGCAGCTGACCCTCTCTATTCAGACGGCGCGTGGTCCGAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp GCCCTTTCTCCCTGTGCGTGCCAGAAGCAGGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGGGAGAAGTATTACTCCAGGATTTCA +
Preference number: 5 (lower is better)
Translates to: ALSPCACQKQVEPEA*CNRCQREKYYSRIS
Trigger: TGAAATCCTGGAGTAATACTTCTCCCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACGCACAGGGAGAAAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS GCA 90 bp GCTGTGAGGTCCTCCTCCTCGGATGATTCATCGGAGTCCTCATGGTaGATTTTATTCAGGCTAGGAGTGCTTCCTGACAGTTGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: AVRSSSSDDSSESSW*ILFRLGVLPDSWRS
Trigger: GGAGCGCCAACTGTCAGGAAGCACTCCTAGCCTGAATAAAATGCACCATGAGGACTCCGATGAATCATCCGAGGAGGAGGACCTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp GACAGGAGGCTCCTGTCAGAGACTAGTGCCAGAAACACTGGAGTCTaGAAGAAAAGTAGTGAGGACTCGGTAACTCTGGGCCCTGCGGAT +
Preference number: 5 (lower is better)
Translates to: DRRLLSETSARNTGV*KKSSEDSVTLGPAD
Trigger: ATCCGCAGGGCCCAGAGTTACCGAGTCCTCACTACTTTTCTTCCAGACTCCAGTGTTTCTGGCACTAGTCTCTGACAGGAGCCTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp GTGACCCAGAATATGGTGGCCAGCAGGTTGGTGGGATGGTTTATGTaGGATGGGTCCGTGAGACTGTCCTTCAAGGAGGATGAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: VTQNMVASRLVGWFM*DGSVRLSFKEDELL
Trigger: CAGAAGCTCATCCTCCTTGAAGGACAGTCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGCTGGCCACCATATTCTGGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp AAGGCCACTGTGACCCAGAATATGGTGGCCAGCAGGTTGGTGGGATaGTTTATGTGGGATGGGTCCGTGAGACTGTCCTTCAAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: KATVTQNMVASRLVG*FMWDGSVRLSFKED
Trigger: ATCCTCCTTGAAGGACAGTCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGCTGGCCACCATATTCTGGGTCACAGTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGAAGAGCTGACAAATTaGGATCCGATTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCEELTN*DPIPRR
Trigger: CCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGTGGTGCCTCAGACTTaGCTGGGGGAAGAGAAATCT +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCVVPQT*LGEEKS
Trigger: AGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCAC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCTGCTGCGGAAGCCTaGCTACTGGCCGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNAAAEA*LLAVKR
Trigger: CCGCTTCACGGCCAGTAGCAAGGCTTCCGCAGCAGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCTGCTGCGGAAGCCTaGCTACTGGCCGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLAAAEA*LLAVKR
Trigger: CCGCTTCACGGCCAGTAGCAAGGCTTCCGCAGCAGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCGGCAGTTGCGGTGTaGCCGCTGGTGGTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCSAVAV*PLVVPG
Trigger: CCCGGGAACCACCAGCGGCAACACCGCAACTGCCGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATCGGCAGTTGCGGTGTaGCCGCTGGTGGTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSAVAV*PLVVPG
Trigger: CCCGGGAACCACCAGCGGCAACACCGCAACTGCCGA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGGCTCCGTTCGGCAGTaGCGGTGTTGCCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQGSVRQ*RCCRWW
Trigger: CCACCAGCGGCAACACCGCAACTGCCGAACGGAGCC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCACAGAGAAGCTTCGTaGATGCCGGCTCCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLHREAS*MPAPFG
Trigger: GCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp GATGAGCTTCTGGTTTTTGAGGAGAGGCCTTGTTGGGTACAAGCCTaGATTCTGTCCAGTGTGGCACTTCGAGGTGGGTCAGAGGATCGG +
Preference number: 5 (lower is better)
Translates to: DELLVFEERPCWVQA*ILSSVALRGGSEDR
Trigger: CCGATCCTCTGACCCACCTCGAAGTGCCACACTGGACAGAATTCAGGCTTGTACCCAACAAGGCCTCTCCTCAAAAACCAGAAGCTCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TGGTGGCCAGCAGGTTGGTGGGATGGTTTATGTGGGATGGGTCCGTaGGACTGTCCTTCAAGGAGGATGAGCTTCTGGTTTTTGAGGAGA +
Preference number: 5 (lower is better)
Translates to: WWPAGWWDGLCGMGP*DCPSRRMSFWFLRR
Trigger: TCTCCTCAAAAACCAGAAGCTCATCCTCCTTGAAGGACAGTCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGCTGGCCACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TCAGGCAAGGAAGCATCAAAGCTGGACATTCTGGTGTTAAAGGAATaGGGTTCTGCAGGGGTCGAGTCACAGGCTGTGGTGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SGKEASKLDILVLKE*GSAGVESQAVVSSS
Trigger: GGAGCTGCTCACCACAGCCTGTGACTCGACCCCTGCAGAACCTCATTCCTTTAACACCAGAATGTCCAGCTTTGATGCTTCCTTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp TTCAGGCTAGGAGTGCTTCCTGACAGTTGGCGCTCCTCCAGAATCTaGATATCACACTTATCCAGGCTGTCCAGAGAACGTCTGCGCACT +
Preference number: 5 (lower is better)
Translates to: FRLGVLPDSWRSSRI*ISHLSRLSRERLRT
Trigger: AGTGCGCAGACGTTCTCTGGACAGCCTGGATAAGTGTGATATGCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGCCTGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATCTGCCGCAAAGCTTaGCCGAGTTCGTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCICRKA*PSSLFF
Trigger: GAAGAACAACGAACTCGGCAAAGCTTTGCGGCAGAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCTTCCAAAGATGTCATaGGGCCACAGACTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLPKMS*GHRLLH
Trigger: GTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAAG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGGGGTCTTCTCCACGTaGCAGAGATTTTGTCAATGG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCGVFST*QRFCQW
Trigger: CCATTGACAAAATCTCTGCAACGTGGAGAAGACCCC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGATGACCTGATCAAATaGGGGGTCTTCTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQDDLIK*GVFSTL
Trigger: CAACGTGGAGAAGACCCCCAATTTGATCAGGTCATC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGAACAGCTTCAGCCTTaGAACCCTCAGAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPEQLQP*NPQKSA
Trigger: TGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTTC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTTCGGAGTCCCCTGGTaGACAGGTAATTACTCCATC +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCFGVPW*TGNYSI
Trigger: GATGGAGTAATTACCTGTCAACCAGGGGACTCCGAA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTTCGGAGTCCCCTGGTaGACAGGTAATTACTCCATC +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQFGVPW*TGNYSI
Trigger: GATGGAGTAATTACCTGTCAACCAGGGGACTCCGAA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGCCACAATATGCATATaGCCAGTGTTGGGACCAAGG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVATICI*PVLGPR
Trigger: CCTTGGTCCCAACACTGGCAATATGCATATTGTGGC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGCATGCTTGATATCTTaGTCTTTGACCTCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGACLIS*SLTSRK
Trigger: CTTCCTCGAGGTCAAAGACAAAGATATCAAGCATGC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTTGGACAAGCAGTTGTaGAGGAAAATGTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPLDKQL*RKMCHL
Trigger: CAGGTGGCACATTTTCCTCAACAACTGCTTGTCCAA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCAGAGGCATGTCCCTaGGTACCACACCGCGGGACC +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSEACP*VPHRGT
Trigger: GGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGCTGTGGGGCAGTGCTaGGGTAAGTTCTCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLAVGQC*GKFSCR
Trigger: CCGGCAGGAGAACTTACCCAAGCACTGCCCCACAGC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGCTCTAGGGCTCCATTaGTGCTGTCACTTATTACAC +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPALGLH*CCHLLH
Trigger: GTGTAATAAGTGACAGCACAAATGGAGCCCTAGAGC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGGGGAAAGGCCCACATaGTCAAAGACAGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLGERPT*SKTGPQ
Trigger: CTGTGGCCCTGTCTTTGACAATGTGGGCCTTTCCCC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGTCATGTACATGAGGTaGTTCAGGACCAGTGACGTG +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQVMYMR*FRTSDV
Trigger: CACGTCACTGGTCCTGAACAACCTCATGTACATGAC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGTCATGTACATGAGGTaGTTCAGGACCAGTGACGTG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVVMYMR*FRTSDV
Trigger: CACGTCACTGGTCCTGAACAACCTCATGTACATGAC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCTGCTGCGGAAGCCTaGCTACTGGCCGTGAAGCGG +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQAAAEA*LLAVKR
Trigger: CCGCTTCACGGCCAGTAGCAAGGCTTCCGCAGCAGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGATCCTCCAGAGCTATaGCTGTATCTTGACTCGAGG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVDPPEL*LYLDSR
Trigger: CCTCGAGTCAAGATACAGCAATAGCTCTGGAGGATC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGAATGGAAATTGCTGTaGCAAGAGAGGGCAATCAAG +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGEWKLL*QERAIK
Trigger: CTTGATTGCCCTCTCTTGCAACAGCAATTTCCATTC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATAGAGATATTCAGGTaGGTAGGCTGGCTGCACGGT +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCIEIFR*VGWLHG
Trigger: ACCGTGCAGCCAGCCTACCAACCTGAATATCTCTAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGCTGACAGAGGTTGCTaGAGGGCCCGGAATATCTGG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLADRGC*RARNIW
Trigger: CCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAGC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGGCTCCGTTCGGCAGTaGCGGTGTTGCCGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFGSVRQ*RCCRWW
Trigger: CCACCAGCGGCAACACCGCAACTGCCGAACGGAGCC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATGAGCTTCTGGTTTTaGAGGAGAGGCCTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQMSFWF*RRGLVG
Trigger: CCCAACAAGGCCTCTCCTCAAAAACCAGAAGCTCAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATGAGCTTCTGGTTTTaGAGGAGAGGCCTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCMSFWF*RRGLVG
Trigger: CCCAACAAGGCCTCTCCTCAAAAACCAGAAGCTCAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTCCACCATGGATATTTaGGACACTGGTGTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPSTMDI*DTGVSR
Trigger: TCTGCTGACACCAGTGTCCAAAATATCCATGGTGGA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCTCAATCCTACTTCTaGGCCACACAGAGAAAGGAC +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQAQSYF*ATQRKD
Trigger: GTCCTTTCTCTGTGTGGCCAAGAAGTAGGATTGAGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGACTTGGGGTTATTACTTaGGCAACCCACATGCAAAAC +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGLGVIT*ATHMQN
Trigger: GTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAAG...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGTAGATCTAAAGTTATaGCTGGGCTCTGCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCVDLKL*LGSAGV
Trigger: CACGCCAGCAGAGCCCAGCAATAACTTTAGATCTAC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp CAGTTGTTGAGGAAAATGTGCCACCTGTTCAGGAACAGCTGCTTCTaGCTGACACAGAGCAAACAGGTCACCAGGGGGTACAAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: QLLRKMCHLFRNSCF*LTQSKQVTRGYKAK
Trigger: CTTGGCCTTGTACCCCCTGGTGACCTGTTTGCTCTGTGTCAGTCAGAAGCAGCTGTTCCTGAACAGGTGGCACATTTTCCTCAACAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GGAAGAACGGCTCCTGTAACCGGCATGGGAGGTTCCCCATCTTTCTaGTGCAAGCTATCAGCTATGACCAAGAATGCCCGTAAACCAATG +
Preference number: 5 (lower is better)
Translates to: GRTAPVTGMGGSPSF*CKLSAMTKNARKPM
Trigger: CATTGGTTTACGGGCATTCTTGGTCATAGCTGATAGCTTGCAGCAGAAAGATGGGGAACCTCCCATGCCGGTTACAGGAGCCGTTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp AAGACTCTAAACTGCTGCTCGCTGTTTGTGTCATCCATGTTCTCCTaGTCTCGGGCACCGTCCTCAGAAGATACCAAGCTTGTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: KTLNCCSLFVSSMFS*SRAPSSEDTKLVWC
Trigger: GCACCAGACAAGCTTGGTATCTTCTGAGGACGGTGCCCGAGAGCAGGAGAACATGGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp AGCTCCACATCTAGGAAGTCGAAGTCTCTGAAGACTCTAAACTGCTaGTCGCTGTTTGTGTCATCCATGTTCTCCTGCTCTCGGGCACCG +
Preference number: 5 (lower is better)
Translates to: SSTSRKSKSLKTLNC*SLFVSSMFSCSRAP
Trigger: CGGTGCCCGAGAGCAGGAGAACATGGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTTCAGAGACTTCGACTTCCTAGATGTGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp GGGTGCCTATGGCCTTGTTATCGTAGCTCACTGTACCATCAGGTGTaGTCGCCATTATTTCTGGAGTGGAAGCTCTTAAGTGTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: GCLWPCYRSSLYHQV*SPLFLEWKLLSVLG
Trigger: GCCCAGGACACTTAAGAGCTTCCACTCCAGAAATAATGGCGACCACACCTGATGGTACAGTGAGCTACGATAACAAGGCCATAGGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp TTGTTGGGTACAAGCCTGAATTCTGTCCAGTGTGGCACTTCGAGGTaGGTCAGAGGATCGGTCGATGACACCAAACTTCTTGGGCACAGA +
Preference number: 5 (lower is better)
Translates to: LLGTSLNSVQCGTSR*VRGSVDDTKLLGHR
Trigger: TCTGTGCCCAAGAAGTTTGGTGTCATCGACCGATCCTCTGACCCACCTCGAAGTGCCACACTGGACAGAATTCAGGCTTGTACCCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGCTGCTGGGAGTTCATaGATGGAACTAGAAAGATCA +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPAAGSS*MELERS
Trigger: TGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGGCTGCGAAGAGCTGACAAATTaGGATCCGATTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: ADKFGSDSPEVISKVTGCEELTN*DPIPRR
Trigger: CCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTC...GCAGCCAGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATCCCCCTGCAAATGTaGCCTTACAATTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQIPLQM*PYNLQA
Trigger: GGCTTGCAAATTGTAAGGCAACATTTGCAGGGGGAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCCCAGCCAAGGCATGCTaGATATCTTTGTCTTTGACC +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVPAKAC*ISLSLT
Trigger: GGTCAAAGACAAAGATATCAAGCATGCCTTGGCTGG...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTTGGACAAGCAGTTGTaGAGGAAAATGTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLDKQL*RKMCHL
Trigger: CAGGTGGCACATTTTCCTCAACAACTGCTTGTCCAA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATCAGAGGCATGTCCCTaGGTACCACACCGCGGGACC +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSEACP*VPHRGT
Trigger: GGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTGA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTCCCGGAGCAGGAAGTaGGTAAAGCCAAATAGTACA +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSRSRK*VKPNST
Trigger: TGTACTATTTGGCTTTACCAACTTCCTGCTCCGGGA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCCCGGAGCAGGAAGTaGGTAAAGCCAAATAGTACA +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSRSRK*VKPNST
Trigger: TGTACTATTTGGCTTTACCAACTTCCTGCTCCGGGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGACAGTTGCTATGGCTTaGAAGCAGCCAGATGCAAGT +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQTVAMA*KQPDAS
Trigger: ACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCCCGTTGGGGTGTGTaGTGGGGAATCGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNARWGV*WGIAGL
Trigger: TAAGCCAGCGATTCCCCACAACACACCCCAACGGGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCACCTTCCCGGTCCTaGACTTCGTCCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSPSRS*TSSSGL
Trigger: CAGCCCAGAGGACGAAGTCAAGGACCGGGAAGGTGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGATTCTTTCAATATCTaGTTCTCCTCAGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGDSFNI*FSSASG
Trigger: CCCAGATGCTGAGGAGAACAAGATATTGAAAGAATC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCAAAATTACAGCAATATaGCACCTGTGGAGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVKITAI*HLWSGP
Trigger: GGGGCCACTCCACAGGTGCAATATTGCTGTAATTTT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAGTGCCTTGAAGAGCTaGCGAGGGCTGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLSALKS*RGLSAM
Trigger: CATTGCAGACAGCCCTCGCAAGCTCTTCAAGGCACT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTCACCTCCACCAATCTaGAGAGAAGGTCAGATAAGG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSPPPI*REGQIR
Trigger: CCTTATCTGACCTTCTCTCAAGATTGGTGGAGGTGA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCACAGAGAAGCTTCGTaGATGCCGGCTCCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLHREAS*MPAPFG
Trigger: GCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGATGACACCAAACTTCTaGGGCACAGAGAAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQMTPNF*GTEKLR
Trigger: ACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCAT...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGATTCAGAACTTCCACATaGAACTGTTTGACAGGAACG +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGFRTST*NCLTGT
Trigger: CGTTCCTGTCAAACAGTTCAATGTGGAAGTTCTGAA...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATACAAGGACGTTGGAGTaGGAGCCTGAGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNTRTLE*EPEEVE
Trigger: TTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTGT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCAGAAGATACCAAGCTaGTCTGGTGCTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQQKIPS*SGAQAD
Trigger: ATCTGCTTGAGCACCAGACAAGCTTGGTATCTTCTG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGGCAGCACTGCCAGTTaGGAACCCAGTGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQGSTAS*EPSGDR
Trigger: CCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGCC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAACAGGCTGTCAGCTTTaGACCATCTTACAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGTGCQL*TILQFS
Trigger: TGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCATTTCACCCGGTCATaGGCTTCCTTGCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNHFTRS*ASLLSL
Trigger: AAGGGACAGCAAGGAAGCCAATGACCGGGTGAAATG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp AGGAGAACTGTGTCGCTGCTGACCCCACAGAGGCTAATCAGGAACTaGAAGGTGATCCTCAGGTTGTTGCTCCATTTCTCATTGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RRTVSLLTPQRLIRN*KVILRLLLHFSLLA
Trigger: AGCCAACAATGAGAAATGGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCTCTGTGGGGTCAGCAGCGACACAGTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp TCCAGCTCCACATCTAGGAAGTCGAAGTCTCTGAAGACTCTAAACTaGTGCTCGCTGTTTGTGTCATCCATGTTCTCCTGCTCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: SSSTSRKSKSLKTLN*CSLFVSSMFSCSRA
Trigger: TGCCCGAGAGCAGGAGAACATGGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTTCAGAGACTTCGACTTCCTAGATGTGGAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp TTCAGTAAATATTTGATACTGATCTCAAAGAAGCCCGAATCCTGCTaGCTGGCCATGTCTGCGGCATACAAAGAGGCTGGGAGGACGGGC +
Preference number: 5 (lower is better)
Translates to: FSKYLILISKKPESC*LAMSAAYKEAGRTG
Trigger: GCCCGTCCTCCCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTTTGAGATCAGTATCAAATATTTACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS CCA 90 bp GAAGCAATGTTAGCCTACATGCTGGTGTTCCTGCTATGTGAGTCCTaGCCAGGGCTCTCTTTTCCTCTTGGTCGTGAACAGTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: EAMLAYMLVFLLCES*PGLSFPLGREQSSS
Trigger: TGATGAGGACTGTTCACGACCAAGAGGAAAAGAGAGCCCTGGCCAGGACTCACATAGCAGGAACACCAGCATGTAGGCTAACATTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCTTCCAAAGATGTCATaGGGCCACAGACTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLPKMS*GHRLLH
Trigger: GTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAAG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGATGACCTGATCAAATaGGGGGTCTTCTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNDDLIK*GVFSTL
Trigger: CAACGTGGAGAAGACCCCCAATTTGATCAGGTCATC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAAGAGCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTTGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: GRADKFGSDSPEVISKVTWSSAR*PFSSPS
Trigger: TGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCA...AGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTCTAACACACTGAACTaGAGCTTGTCCAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSNTLN*SLSRSP
Trigger: TGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTGCATATTGCCAGTGTaGGGACCAAGGTACCCTTCT +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNCILPV*GPRYPS
Trigger: AGAAGGGTACCTTGGTCCCAACACTGGCAATATGCA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGCATGCTTGATATCTTaGTCTTTGACCTCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVACLIS*SLTSRK
Trigger: CTTCCTCGAGGTCAAAGACAAAGATATCAAGCATGC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGCCATCTTGGGATCTTaGTTTTTAAGGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPAILGS*FLRLDK
Trigger: CTTGTCCAACCTTAAAAACAAAGATCCCAAGATGGC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGCAACTCGAGCCATCTaGGGATCTTTGTTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVATRAI*GSLFLR
Trigger: CCTTAAAAACAAAGATCCCAAGATGGCTCGAGTTGC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCTGTGGGGCAGTGCTaGGGTAAGTTCTCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFAVGQC*GKFSCR
Trigger: CCGGCAGGAGAACTTACCCAAGCACTGCCCCACAGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCGTTCTCGGCGTTTCTaGTTCTCTGGTCTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNRSRRF*FSGLLS
Trigger: GGAAAGAAGACCAGAGAACAAGAAACGCCGAGAACG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGGGGAAAGGCCCACATaGTCAAAGACAGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPGERPT*SKTGPQ
Trigger: CTGTGGCCCTGTCTTTGACAATGTGGGCCTTTCCCC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGCCCGTTGGGGTGTGTaGTGGGGAATCGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCARWGV*WGIAGL
Trigger: TAAGCCAGCGATTCCCCACAACACACCCCAACGGGC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCACCTTCCCGGTCCTaGACTTCGTCCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCSPSRS*TSSSGL
Trigger: CAGCCCAGAGGACGAAGTCAAGGACCGGGAAGGTGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTCTCCATTTCTCATTGTaGGCTAAAGCATTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPLHFSL*AKAFQA
Trigger: TGCTTGGAATGCTTTAGCCAACAATGAGAAATGGAG...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCAAGGTGATCCTCAGGTaGTTGCTCCATTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCKVILR*LLHFSL
Trigger: CAATGAGAAATGGAGCAACAACCTGAGGATCACCTT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCAAGCTCTTCCATGGTTaGAATGGTGTTGTTACGGCA +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVKLFHG*NGVVTA
Trigger: TGCCGTAACAACACCATTCAAACCATGGAAGAGCTT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGCCAGCAACCACTGTATaGCTGCTAGAGGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLPATTV*LLEVVP
Trigger: AGGAACCACCTCTAGCAGCAATACAGTGGTTGCTGG...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGATCCTCCAGAGCTATaGCTGTATCTTGACTCGAGG +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNDPPEL*LYLDSR
Trigger: CCTCGAGTCAAGATACAGCAATAGCTCTGGAGGATC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAAGAAACTCAATGAGCTaGTTTGCCTTCTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGRNSMS*FAFSSV
Trigger: AACAGATGAGAAGGCAAACAAGCTCATTGAGTTTCT...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGACCAGCATAGTGCCTaGAAGAGCTTGCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLDQHSA*KSLRGL
Trigger: CAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGTC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGACCAGCATAGTGCCTaGAAGAGCTTGCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPDQHSA*KSLRGL
Trigger: CAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGTC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCGGCAGTTGCGGTGTaGCCGCTGGTGGTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSAVAV*PLVVPG
Trigger: CCCGGGAACCACCAGCGGCAACACCGCAACTGCCGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCTCCACATTGAACTGTTaGACAGGAACGACAGAAAGG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCSTLNC*TGTTER
Trigger: CCTTTCTGTCGTTCCTGTCAAACAGTTCAATGTGGA...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTTTCAGAACTTCCACATaGAACTGTTTGACAGGAACG +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPFRTST*NCLTGT
Trigger: CGTTCCTGTCAAACAGTTCAATGTGGAAGTTCTGAA...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTGGCCCACAGAGCTTTaGGCTGTCCTCTCTGAACGC +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNWPTEL*AVLSER
Trigger: GCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp CACCATGCTATGTTCAAGATCTCTATTCTTCAGAATCTTTTCATCTaGGGAAGAGGCCAGGACACCGGCGCCCAACGAGACCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: HHAMFKISILQNLFI*GRGQDTGAQRDPQH
Trigger: ATGCTGTGGGTCTCGTTGGGCGCCGGTGTCCTGGCCTCTTCCTCAGATGAAAAGATTCTGAAGAATAGAGATCTTGAACATAGCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428783.1
CDS TCA 90 bp TGTCGAAGGGATAGTTCCTGCTTCCACACACAGTTGCTATGGCTTTaGAGCAGCCAGATGCAAGTTGGTAGGAACCTGTGTAGCATCGGT +
Preference number: 5 (lower is better)
Translates to: CRRDSSCFHTQLLWL*SSQMQVGRNLCSIG
Trigger: ACCGATGCTACACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGTGTGTGGAAGCAGGAACTATCCCTTCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GACATGGGAAGGGCTTTTCACATCATAATGGCTATTGACCAGGACTaGGTTCCATTCCACCAACCACTGCAGATCCACATTGTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: DMGRAFHIIMAIDQD*VPFHQPLQIHIVGE
Trigger: CTCACCCACAATGTGGATCTGCAGTGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAGCCATTATGATGTGAAAAGCCCTTCCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GTTCCTGCTTCCACACACAGTTGCTATGGCTTTGAAGCAGCCAGATaGAAGTTGGTAGGAACCTGTGTAGCATCGGTCAATTGCCCAGTT +
Preference number: 5 (lower is better)
Translates to: VPASTHSCYGFEAAR*KLVGTCVASVNCPV
Trigger: AACTGGGCAATTGACCGATGCTACACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGTGTGTGGAAGCAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CGGTGTTGCCGCTGGTGGTTCCCGGGTTCATGTTTAGTTGTCCTGTaGTCTTTCTGCTTGCTGTTAGTTTACTGCTGGAGCTTAAATCTG +
Preference number: 5 (lower is better)
Translates to: RCCRWWFPGSCLVVL*SFCLLLVYCWSLNL
Trigger: CAGATTTAAGCTCCAGCAGTAAACTAACAGCAAGCAGAAAGAGCACAGGACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp CCATTCGCGTTTCCAGGAACTGGTTACTTGCTAAATCTTCTGCACTaGGGTAGTGTGCAAATGGTGGATGGTTTCCAGAAGGCACCGCAT +
Preference number: 5 (lower is better)
Translates to: PFAFPGTGYLLNLLH*GSVQMVDGFQKAPH
Trigger: ATGCGGTGCCTTCTGGAAACCATCCACCATTTGCACACTACCCCAGTGCAGAAGATTTAGCAAGTAACCAGTTCCTGGAAACGCGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463566.1
CDS CCA 90 bp TCCTCATGGTGCATTTTATTCAGGCTAGGAGTGCTTCCTGACAGTTaGCGCTCCTCCAGAATCTGCATATCACACTTATCCAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSWCILFRLGVLPDS*RSSRICISHLSRLS
Trigger: GGACAGCCTGGATAAGTGTGATATGCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGCCTGAATAAAATGCACCATGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTTCAGCTCCATCAGCTaGGTGCAGATCTCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFFSSIS*VQISVR
Trigger: CCTGACCGAGATCTGCACCAAGCTGATGGAGCTGAA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLWSSAR*PFSSPS
Trigger: TGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPWSSAR*PFSSPS
Trigger: TGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTACACCGCGGGACCCTTaGGGGAAAAGTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLTPRDP*GKSVVM
Trigger: CATCACAACACTTTTCCCCAAAGGGTCCCGCGGTGT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCGCAGTGCTGGTTTTCTaGGCATTAATTGGGCTATTT +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVAVLVF*ALIGLF
Trigger: AAATAGCCCAATTAATGCCAAGAAAACCAGCACTGC...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGCTCTAGGGCTCCATTaGTGCTGTCACTTATTACAC +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNALGLH*CCHLLH
Trigger: GTGTAATAAGTGACAGCACAAATGGAGCCCTAGAGC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTTGGTGTCAGAGGCCTaGAATAGAACAAGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQLVSEA*NRTRFN
Trigger: GTTAAACCTTGTTCTATTCAAGGCCTCTGACACCAA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCCCGTTGGGGTGTGTaGTGGGGAATCGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFARWGV*WGIAGL
Trigger: TAAGCCAGCGATTCCCCACAACACACCCCAACGGGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGATCCTCCAGAGCTATaGCTGTATCTTGACTCGAGG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLDPPEL*LYLDSR
Trigger: CCTCGAGTCAAGATACAGCAATAGCTCTGGAGGATC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTAAGGGCTGCGGCTGCTaGGTCTCTGTAATAGTCAGC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLKGCGC*VSVIVS
Trigger: GCTGACTATTACAGAGACCAAGCAGCCGCAGCCCTT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAGTGCCTTGAAGAGCTaGCGAGGGCTGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNSALKS*RGLSAM
Trigger: CATTGCAGACAGCCCTCGCAAGCTCTTCAAGGCACT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTATGGTGGCCAGCAGGTaGGTGGGATGGTTTATGTGG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLMVASR*VGWFMW
Trigger: CCACATAAACCATCCCACCAACCTGCTGGCCACCAT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTATCGACAGACCACATaGACCCACGTGGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFYRQTT*THVAQS
Trigger: GGACTGTGCCACGTGGGTCAATGTGGTCTGTCGATA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTATCGACAGACCACATaGACCCACGTGGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLYRQTT*THVAQS
Trigger: GGACTGTGCCACGTGGGTCAATGTGGTCTGTCGATA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGCTCAGCAAGGGACAAAGTCCTGCCGTGGCCCACAGAGCTTTTGGCTGTCCTGATGTATTTCTATTTTaGAGAGGTCACTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LLSKGQSPAVAHRAFGCPDVFLF*RGHCAG
Trigger: ACCAGCACAGTGACCTCTCAAAAATAGAAATACATC...AGGACAGCCAAAAGCTCTGTGGGCCACGGCAGGACTTTGTCCCTTGCTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCAGAAGATACCAAGCTaGTCTGGTGCTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNQKIPS*SGAQAD
Trigger: ATCTGCTTGAGCACCAGACAAGCTTGGTATCTTCTG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAATGACGTTGCCCCAGCATGGCAGCACTGCCAGTTTGGAACCCAGTGGGGAGTTGATTACAGAGAATaGGTTGAAGCTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: LNDVAPAWQHCQFGTQWGVDYRE*VEAHSF
Trigger: AAAACTGTGAGCTTCAACCAATTCTCTGTAATCAAC...TCCCCACTGGGTTCCAAACTGGCAGTGCTGCCATGCTGGGGCAACGTCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGGACTTGCTTCTTATTaGCTGGACGCTGATCTCCCT +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLGLASY*LDADLP
Trigger: AGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTCC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS TCA 90 bp ATCGGAGTCCTCATGGTGCATTTTATTCAGGCTAGGAGTGCTTCCTaGCAGTTGGCGCTCCTCCAGAATCTGCATATCACACTTATCCAG +
Preference number: 5 (lower is better)
Translates to: IGVLMVHFIQARSAS*QLALLQNLHITLIQ
Trigger: CTGGATAAGTGTGATATGCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGCCTGAATAAAATGCACCATGAGGACTCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TACCAAGCTTGTCTGGTGCTCAAGCAGATCCAGATCCCCACACGATaGAAAAATCACCTGCGAATCAAGAGTCCTCTCCTGAGAAACCGT +
Preference number: 5 (lower is better)
Translates to: YQACLVLKQIQIPTR*KNHLRIKSPLLRNR
Trigger: ACGGTTTCTCAGGAGAGGACTCTTGATTCGCAGGTGATTTTTTCATCGTGTGGGGATCTGGATCTGCTTGAGCACCAGACAAGCTTGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641614.1
CDS GCA 90 bp GATTTCAGTAAATATTTGATACTGATCTCAAAGAAGCCCGAATCCTaGTGGCTGGCCATGTCTGCGGCATACAAAGAGGCTGGGAGGACG +
Preference number: 5 (lower is better)
Translates to: DFSKYLILISKKPES*WLAMSAAYKEAGRT
Trigger: CGTCCTCCCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTTTGAGATCAGTATCAAATATTTACTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS GCA 90 bp CCCCTCAGTCATGTCCAGGCTAAAGCTGTCGCTGCATTCAAAAGCTaGTGGGAGTTCATTGATGGAACTAGAAAGATCATCCTCATGCAC +
Preference number: 5 (lower is better)
Translates to: PLSHVQAKAVAAFKS*WEFIDGTRKIILMH
Trigger: GTGCATGAGGATGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGCGACAGCTTTAGCCTGGACATGACTGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477712.2
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GACTCTGTGATCTCAATGCTCTCTAGTCTCATCAAAGGCACCAACTaGTTTAACAGAACTCCCACCGATGGGGTGCCTATGGCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: DSVISMLSSLIKGTN*FNRTPTDGVPMALL
Trigger: TAACAAGGCCATAGGCACCCCATCGGTGGGAGTTCTGTTAAAGCAGTTGGTGCCTTTGATGAGACTAGAGAGCATTGAGATCACAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CCATCTCTCGGGTCTGCAGGAGCACGGAAGCAATGGAATGGAAATTaGTGTTGCAAGAGAGGGCAATCAAGAGGTGAAGAAGCAGTTTTT +
Preference number: 5 (lower is better)
Translates to: PSLGSAGARKQWNGN*CCKRGQSRGEEAVF
Trigger: AAAAACTGCTTCTTCACCTCTTGATTGCCCTCTCTTGCAACAGCAATTTCCATTCCATTGCTTCCGTGCTCCTGCAGACCCGAGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCATGGACACGAATTTTTaGTTGTTAAGGCAGGCATCA +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVMDTNF*LLRQAS
Trigger: TGATGCCTGCCTTAACAACAAAAAATTCGTGTCCAT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCATGGACACGAATTTTTaGTTGTTAAGGCAGGCATCA +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCMDTNF*LLRQAS
Trigger: TGATGCCTGCCTTAACAACAAAAAATTCGTGTCCAT...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTGGCTGCGCTGCTGGGAGTTCATaGATGGAACTAGAAAGATCA +
Preference number: 5 (lower is better)
Translates to: ADKFGSDSPEVISKVTGCAAGSS*MELERS
Trigger: TGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGC...GCAGCCAGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATATGTTGCCTTACAATTaGCAAGCCAAGAGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNMLPYN*QAKRVW
Trigger: CCACACTCTCTTGGCTTGCAAATTGTAAGGCAACAT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAACTTGAGCTTGTCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAATCCCCCTGCAAATGTaGCCTTACAATTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: LNLSLSRSPHERRVSASTIPLQM*PYNLQA
Trigger: GGCTTGCAAATTGTAAGGCAACATTTGCAGGGGGAT...TGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGACAAGCTCAAGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGTCTTTGTTTTTAAGGTaGGACAAGCAGTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQSLFLR*DKQLLR
Trigger: CCTCAACAACTGCTTGTCCAACCTTAAAAACAAAGA...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCTCTTTGTTTTTAAGGTaGGACAAGCAGTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVSLFLR*DKQLLR
Trigger: CCTCAACAACTGCTTGTCCAACCTTAAAAACAAAGA...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTACACCGCGGGACCCTTaGGGGAAAAGTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCTPRDP*GKSVVM
Trigger: CATCACAACACTTTTCCCCAAAGGGTCCCGCGGTGT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTCAGAGGCATGTCCCTaGGTACCACACCGCGGGACC +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGSEACP*VPHRGT
Trigger: GGTCCCGCGGTGTGGTACCAAGGGACATGCCTCTGA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGATTAAAACGGACAGTTaGCGTGTGGCCACCTGGAAA +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLIKTDS*RVATWK
Trigger: TTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAAT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGCTGTGGGGCAGTGCTaGGGTAAGTTCTCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTAVGQC*GKFSCR
Trigger: CCGGCAGGAGAACTTACCCAAGCACTGCCCCACAGC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGCTCAGCGACTTTCTTaGAGTATACAAAAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCAQRLS*SIQKAL
Trigger: CAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAGC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCTCAGCGACTTTCTTaGAGTATACAAAAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQAQRLS*SIQKAL
Trigger: CAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTCACCTTCCCGGTCCTaGACTTCGTCCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSPSRS*TSSSGL
Trigger: CAGCCCAGAGGACGAAGTCAAGGACCGGGAAGGTGA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACCAGCAACCACTGTATaGCTGCTAGAGGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPPATTV*LLEVVP
Trigger: AGGAACCACCTCTAGCAGCAATACAGTGGTTGCTGG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGCTATTGCTGTATCTaGACTCGAGGCGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSYCCI*TRGECG
Trigger: CCCACACTCGCCTCGAGTCAAGATACAGCAATAGCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAGCTATTGCTGTATCTaGACTCGAGGCGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSYCCI*TRGECG
Trigger: CCCACACTCGCCTCGAGTCAAGATACAGCAATAGCT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAAGTGCCTTGAAGAGCTaGCGAGGGCTGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSALKS*RGLSAM
Trigger: CATTGCAGACAGCCCTCGCAAGCTCTTCAAGGCACT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGACCAGCATAGTGCCTaGAAGAGCTTGCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTDQHSA*KSLRGL
Trigger: CAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGTC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTCACCTCCACCAATCTaGAGAGAAGGTCAGATAAGG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLSPPPI*REGQIR
Trigger: CCTTATCTGACCTTCTCTCAAGATTGGTGGAGGTGA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTCCACCATGGATATTTaGGACACTGGTGTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLSTMDI*DTGVSR
Trigger: TCTGCTGACACCAGTGTCCAAAATATCCATGGTGGA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATATCGACAGACCACATaGACCCACGTGGCACAGTCC +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQYRQTT*THVAQS
Trigger: GGACTGTGCCACGTGGGTCAATGTGGTCTGTCGATA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCACTGCGATGTATTTCTATTTTaGAGAGGTCACTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LLKAEKTLNDVAPAWQHCDVFLF*RGHCAG
Trigger: ACCAGCACAGTGACCTCTCAAAAATAGAAATACATC...GCAGTGCTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTTCCCAGGTAATTCCTaGGAAGCACTAGTCCACACT +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLFPGNS*EALVHT
Trigger: AGTGTGGACTAGTGCTTCCAAGGAATTACCTGGGAA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCCTGCCCGCAAACATTCAGTGGCTTCCCATCTTGCTCAGCAAGGGACAAAGTCATCACTGATGGATTTTaGCTCAATCCTACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PCPQTFSGFPSCSARDKVITDGF*LNPTSW
Trigger: CCAAGAAGTAGGATTGAGCAAAAATCCATCAGTGAT...GACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTGAATGTTTGCGGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGGCAGCACTGCCAGTTaGGAACCCAGTGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTGSTAS*EPSGDR
Trigger: CCTGTCCCCACTGGGTTCCAAACTGGCAGTGCTGCC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGTCTGTCCAAGCCTTTaGAAGGCCGAGAAGACACTG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLVCPSL*KAEKTL
Trigger: CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGAC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCTTGGGGTTATTACTTaGGCAACCCACATGCAAAAC +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLGVIT*ATHMQN
Trigger: GTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAAG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CATCACACTTGTCCTCTGACTAAGCAACAAGGAAGTACCTGGAGCTaGCTGTTTCCTCCAAGCAGATGGTTCCTTGCTTTTCACAACAGA +
Preference number: 5 (lower is better)
Translates to: HHTCPLTKQQGSTWS*LFPPSRWFLAFHNR
Trigger: TCTGTTGTGAAAAGCAAGGAACCATCTGCTTGGAGGAAACAGGCAGCTCCAGGTACTTCCTTGTTGCTTAGTCAGAGGACAAGTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 90 bp AAGACACTGTTCCTGTCCTCACAAACTGTAACCACTGAGCCCATTTaGAACCTAAGGCCACTGAATACAATCTCAGGAGGCACTCTCTTC +
Preference number: 5 (lower is better)
Translates to: KTLFLSSQTVTTEPI*NLRPLNTISGGTLF
Trigger: GAAGAGAGTGCCTCCTGAGATTGTATTCAGTGGCCTTAGGTTGCAAATGGGCTCAGTGGTTACAGTTTGTGAGGACAGGAACAGTGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 90 bp GAATTTGGCTTGTGCCAACACTCCAATGACTTCTGCATACAGGTCTaGCACAATATGCATATTGCCAGTGTTGGGACCAAGGTACCCTTC +
Preference number: 5 (lower is better)
Translates to: EFGLCQHSNDFCIQV*HNMHIASVGTKVPF
Trigger: GAAGGGTACCTTGGTCCCAACACTGGCAATATGCATATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTGTTGGCACAAGCCAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CTTTACAGCAGGGAATTTGGCTTGTGCCAACACTCCAATGACTTCTaGATACAGGTCTGCCACAATATGCATATTGCCAGTGTTGGGACC +
Preference number: 5 (lower is better)
Translates to: LYSREFGLCQHSNDF*IQVCHNMHIASVGT
Trigger: GGTCCCAACACTGGCAATATGCATATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp CAGCTCTGCCAGGTAGGTAACCATATTCAAGGTAATGTCAGCATATaGTTCATGAAGGTATCGACAGACCACATTGACCCACGTGGCACA +
Preference number: 5 (lower is better)
Translates to: QLCQVGNHIQGNVSI*FMKVSTDHIDPRGT
Trigger: TGTGCCACGTGGGTCAATGTGGTCTGTCGATACCTTCATGAAGCATATGCTGACATTACCTTGAATATGGTTACCTACCTGGCAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp CTCAGTCATGTCCAGGCTAAAGCTGTCGCTGCATTCAAAAGCTGCTaGGAGTTCATTGATGGAACTAGAAAGATCATCCTCATGCACGGT +
Preference number: 5 (lower is better)
Translates to: LSHVQAKAVAAFKSC*EFIDGTRKIILMHG
Trigger: ACCGTGCATGAGGATGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGCGACAGCTTTAGCCTGGACATGACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477712.2
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCTTCCAAAGATGTCATaGGGCCACAGACTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLPKMS*GHRLLH
Trigger: GTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAAG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACCTTCCAAAGATGTCATaGGGCCACAGACTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNLPKMS*GHRLLH
Trigger: GTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAAG...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATCTCACTGTATCCGTTTaGTTCTTCATGGCACTAATC +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLTVSV*FFMALI
Trigger: GATTAGTGCCATGAAGAACAAAACGGATACAGTGAG...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGATGACCTGATCAAATaGGGGGTCTTCTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPDDLIK*GVFSTL
Trigger: CAACGTGGAGAAGACCCCCAATTTGATCAGGTCATC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTGAACTTGAGCTTGTCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAACACTGAACTTGAGCTaGTCCAGAAGTCCACATGAA +
Preference number: 5 (lower is better)
Translates to: LNLSLSRSPHERRVSASTTLNLS*SRSPHE
Trigger: TTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGT...TGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGACAAGCTCAAGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGACACTGAACTTGAGCTaGTCCAGAAGTCCACATGAA +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLTLNLS*SRSPHE
Trigger: TTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTTCGGAGTCCCCTGGTaGACAGGTAATTACTCCATC +
Preference number: 5 (lower is better)
Translates to: SRSPHERRVSASTKSVGHFGVPW*TGNYSI
Trigger: GATGGAGTAATTACCTGTCAACCAGGGGACTCCGAA...ATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTCGGAGTCCCCTGGTaGACAGGTAATTACTCCATC +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLFGVPW*TGNYSI
Trigger: GATGGAGTAATTACCTGTCAACCAGGGGACTCCGAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTTCGGAGTCCCCTGGTaGACAGGTAATTACTCCATC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLFGVPW*TGNYSI
Trigger: GATGGAGTAATTACCTGTCAACCAGGGGACTCCGAA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTGCATATTGCCAGTGTaGGGACCAAGGTACCCTTCT +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLCILPV*GPRYPS
Trigger: AGAAGGGTACCTTGGTCCCAACACTGGCAATATGCA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCGCCACAATATGCATATaGCCAGTGTTGGGACCAAGG +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFATICI*PVLGPR
Trigger: CCTTGGTCCCAACACTGGCAATATGCATATTGTGGC...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGCAACTCGAGCCATCTaGGGATCTTTGTTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLATRAI*GSLFLR
Trigger: CCTTAAAAACAAAGATCCCAAGATGGCTCGAGTTGC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACACCGCGGGACCCTTaGGGGAAAAGTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSTPRDP*GKSVVM
Trigger: CATCACAACACTTTTCCCCAAAGGGTCCCGCGGTGT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCAGGACCCAGGGGTCTTaGACAGACTGTGCAAATATC +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRTQGS*TDCANI
Trigger: GATATTTGCACAGTCTGTCAAAGACCCCTGGGTCCT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCCGTTCTCGGCGTTTCTaGTTCTCTGGTCTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFRSRRF*FSGLLS
Trigger: GGAAAGAAGACCAGAGAACAAGAAACGCCGAGAACG...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGTGGTGCCTCAGACTTaGCTGGGGGAAGAGAAATCT +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQVVPQT*LGEEKS
Trigger: AGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCAC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCAGCCAGATGCAAGTaGGTAGGAACCTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQAARCK*VGTCVA
Trigger: TGCTACACAGGTTCCTACCAACTTGCATCTGGCTGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCACCTTCCCGGTCCTaGACTTCGTCCTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSPSRS*TSSSGL
Trigger: CAGCCCAGAGGACGAAGTCAAGGACCGGGAAGGTGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGGTGATCCTCAGGTTGTaGCTCCATTTCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLVILRL*LHFSLL
Trigger: CAACAATGAGAAATGGAGCAACAACCTGAGGATCAC...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGAAGCTCTTCCATGGTTaGAATGGTGTTGTTACGGCA +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLKLFHG*NGVVTA
Trigger: TGCCGTAACAACACCATTCAAACCATGGAAGAGCTT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGATTCTTTCAATATCTaGTTCTCCTCAGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNDSFNI*FSSASG
Trigger: CCCAGATGCTGAGGAGAACAAGATATTGAAAGAATC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGCCGTGTAGGGAGAAATaGGATCATTTTTATCTTCAT +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQPCREK*DHFYLH
Trigger: ATGAAGATAAAAATGATCCAATTTCTCCCTACACGG...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAAAGGGCTGCGGCTGCTaGGTCTCTGTAATAGTCAGC +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTKGCGC*VSVIVS
Trigger: GCTGACTATTACAGAGACCAAGCAGCCGCAGCCCTT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTATAGAGATATTCAGGTaGGTAGGCTGGCTGCACGGT +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLIEIFR*VGWLHG
Trigger: ACCGTGCAGCCAGCCTACCAACCTGAATATCTCTAT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCAGTGCCTTGAAGAGCTaGCGAGGGCTGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSSALKS*RGLSAM
Trigger: CATTGCAGACAGCCCTCGCAAGCTCTTCAAGGCACT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCACAGAGAAGCTTCGTaGATGCCGGCTCCGTTCGGC +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGHREAS*MPAPFG
Trigger: GCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTATGAGCTTCTGGTTTTaGAGGAGAGGCCTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLMSFWF*RRGLVG
Trigger: CCCAACAAGGCCTCTCCTCAAAAACCAGAAGCTCAT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCAAGCCTTTTGAAGGCCGAGAAGACACTGAATGACGTTGCCCCAGCATGGCAGGCAAGATTTGAAAGTTaGGGGTTCTTCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: PSLLKAEKTLNDVAPAWQARFES*GFFSSK
Trigger: TTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTGC...CTGCCATGCTGGGGCAACGTCATTCAGTGTCTTCTCGGCCTTCAAAAGGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTACAAGGACGTTGGAGTaGGAGCCTGAGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCTRTLE*EPEEVE
Trigger: TTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTGT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACTGGAACAAGGACGTaGGAGTTGGAGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQTGTRT*ELEPEE
Trigger: TTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAGT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGCTCAATCCTACTTCTaGGCCACACAGAGAAAGGAC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLAQSYF*ATQRKD
Trigger: GTCCTTTCTCTGTGTGGCCAAGAAGTAGGATTGAGC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTTGAAGCTCACAGTTTaGATGCCAACTTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLKLTV*MPTSKE
Trigger: CTCTTTGGAAGTTGGCATCAAAACTGTGAGCTTCAA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTGGCCCACAGAGCTTTaGGCTGTCCTCTCTGAACGC +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLWPTEL*AVLSER
Trigger: GCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp CAAATATCCAGACATGGGAAGGGCTTTTCACATCATAATGGCTATTaGCCAGGACTGCGTTCCATTCCACCAACCACTGCAGATCCACAT +
Preference number: 5 (lower is better)
Translates to: QISRHGKGFSHHNGY*PGLRSIPPTTADPH
Trigger: ATGTGGATCTGCAGTGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAGCCATTATGATGTGAAAAGCCCTTCCCATGTCTGGATATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp ACTCTCTTCATAGCACATGTTTATGGATGCCCTGACCATAAGTTCTaGATGTCTCCTGAAGGCCCCACTGAAACGTCATCAAACACACCT +
Preference number: 5 (lower is better)
Translates to: TLFIAHVYGCPDHKF*MSPEGPTETSSNTP
Trigger: AGGTGTGTTTGATGACGTTTCAGTGGGGCCTTCAGGAGACATGCAGAACTTATGGTCAGGGCATCCATAAACATGTGCTATGAAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 90 bp AATACAATCTCAGGAGGCACTCTCTTCATAGCACATGTTTATGGATaGCCTGACCATAAGTTCTGCATGTCTCCTGAAGGCCCCACTGAA +
Preference number: 5 (lower is better)
Translates to: NTISGGTLFIAHVYG*PDHKFCMSPEGPTE
Trigger: TTCAGTGGGGCCTTCAGGAGACATGCAGAACTTATGGTCAGGGCATCCATAAACATGTGCTATGAAGAGAGTGCCTCCTGAGATTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS CCA 90 bp GGTTCACGGGCTCTGTCTGCTGCAGCTCAAAGAGAAGCTCTTCCATaGTTTGAATGGTGTTGTTACGGCACAAGTATATTGCCACTTTTT +
Preference number: 5 (lower is better)
Translates to: GSRALSAAAQREALP*FEWCCYGTSILPLF
Trigger: AAAAAGTGGCAATATACTTGTGCCGTAACAACACCATTCAAACCATGGAAGAGCTTCTCTTTGAGCTGCAGCAGACAGAGCCCGTGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp GATTCTTTCAATATCTTGTTCTCCTCAGCATCTGGGAAATTTTCCTaGCCAGCAACCACTGTATTGCTGCTAGAGGTGGTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: DSFNILFSSASGKFS*PATTVLLLEVVPEA
Trigger: AGCCTCAGGAACCACCTCTAGCAGCAATACAGTGGTTGCTGGCCAGGAAAATTTCCCAGATGCTGAGGAGAACAAGATATTGAAAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTATCTGCCGCAAAGCTTaGCCGAGTTCGTTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCICRKA*PSSLFF
Trigger: GAAGAACAACGAACTCGGCAAAGCTTTGCGGCAGAT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACACGTTGCAGAGATTTaGTCAATGGCTTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPHVAEI*SMAFPG
Trigger: CCCTGGAAAAGCCATTGACAAAATCTCTGCAACGTG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGGGGTCTTCTCCACGTaGCAGAGATTTTGTCAATGG +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCGVFST*QRFCQW
Trigger: CCATTGACAAAATCTCTGCAACGTGGAGAAGACCCC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCCAGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATGAACAGCTTCAGCCTTaGAACCCTCAGAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: SRSPHERRVSASTKSVGHEQLQP*NPQKSA
Trigger: TGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTTC...ATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGAACAGCTTCAGCCTTaGAACCCTCAGAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPEQLQP*NPQKSA
Trigger: TGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTTC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGAAGAGCTGACAAATTaGGATCCGATTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTEELTN*DPIPRR
Trigger: CCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAAGAGCTGACAAATTTGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTTCTAACACACTGAACTaGAGCTTGTCCAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: GRADKFGSDSPEVISKVTSNTLN*SLSRSP
Trigger: TGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGA...AGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTATCCCCCTGCAAATGTaGCCTTACAATTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLIPLQM*PYNLQA
Trigger: GGCTTGCAAATTGTAAGGCAACATTTGCAGGGGGAT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTTTACAGCAGGGAATTaGGCTTGTGCCAACACTCCA +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLFTAGN*ACANTP
Trigger: TGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAAA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCCAGCCAAGGCATGCTaGATATCTTTGTCTTTGACC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLPAKAC*ISLSLT
Trigger: GGTCAAAGACAAAGATATCAAGCATGCCTTGGCTGG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCCAGCCAAGGCATGCTaGATATCTTTGTCTTTGACC +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLPAKAC*ISLSLT
Trigger: GGTCAAAGACAAAGATATCAAGCATGCCTTGGCTGG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTTGGACAAGCAGTTGTaGAGGAAAATGTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNLDKQL*RKMCHL
Trigger: CAGGTGGCACATTTTCCTCAACAACTGCTTGTCCAA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATAGGTGCCTTAAAATGTaGTCTACAGCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNRCLKM*STAFRT
Trigger: AGTACGAAAAGCTGTAGACAACATTTTAAGGCACCT...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATCCCGGAGCAGGAAGTaGGTAAAGCCAAATAGTACA +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPSRSRK*VKPNST
Trigger: TGTACTATTTGGCTTTACCAACTTCCTGCTCCGGGA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTCACTGCAGATCCACATaGTGGGTGAGTGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLHCRST*WVSGNV
Trigger: AACATTACCACTCACCCACAATGTGGATCTGCAGTG...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAGGACCCAGGGGTCTTaGACAGACTGTGCAAATATC +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCRTQGS*TDCANI
Trigger: GATATTTGCACAGTCTGTCAAAGACCCCTGGGTCCT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGCTCTAGGGCTCCATTaGTGCTGTCACTTATTACAC +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPALGLH*CCHLLH
Trigger: GTGTAATAAGTGACAGCACAAATGGAGCCCTAGAGC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGGGGAAAGGCCCACATaGTCAAAGACAGGGCCACAG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQGERPT*SKTGPQ
Trigger: CTGTGGCCCTGTCTTTGACAATGTGGGCCTTTCCCC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTACAGTTGCTATGGCTTaGAAGCAGCCAGATGCAAGT +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLTVAMA*KQPDAS
Trigger: ACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGTTGGTGTCAGAGGCCTaGAATAGAACAAGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLLVSEA*NRTRFN
Trigger: GTTAAACCTTGTTCTATTCAAGGCCTCTGACACCAA...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATGCTCAGCGACTTTCTTaGAGTATACAAAAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNAQRLS*SIQKAL
Trigger: CAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAGC...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCACTTCATCTCCATACTaGGCCGTCATGTACATGAGG +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFTSSPY*AVMYMR
Trigger: CCTCATGTACATGACGGCCAAGTATGGAGATGAAGT...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACACTTCATCTCCATACTaGGCCGTCATGTACATGAGG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNTSSPY*AVMYMR
Trigger: CCTCATGTACATGACGGCCAAGTATGGAGATGAAGT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCCAGCAACCACTGTATaGCTGCTAGAGGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFPATTV*LLEVVP
Trigger: AGGAACCACCTCTAGCAGCAATACAGTGGTTGCTGG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGCTATTGCTGTATCTaGACTCGAGGCGAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFSYCCI*TRGECG
Trigger: CCCACACTCGCCTCGAGTCAAGATACAGCAATAGCT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGACCAGCATAGTGCCTaGAAGAGCTTGCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQDQHSA*KSLRGL
Trigger: CAGCCCTCGCAAGCTCTTCAAGGCACTATGCTGGTC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGCTGACAGAGGTTGCTaGAGGGCCCGGAATATCTGG +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGADRGC*RARNIW
Trigger: CCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAGC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGCTGACAGAGGTTGCTaGAGGGCCCGGAATATCTGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQADRGC*RARNIW
Trigger: CCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAGC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTGTGCTCTTTCTGCTaGCTGTTAGTTTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLCSFC*LLVYCW
Trigger: CCAGCAGTAAACTAACAGCAAGCAGAAAGAGCACAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACATGACACCAAACTTCTaGGGCACAGAGAAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNMTPNF*GTEKLR
Trigger: ACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCAT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATTCCCAGGTAATTCCTaGGAAGCACTAGTCCACACT +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPFPGNS*EALVHT
Trigger: AGTGTGGACTAGTGCTTCCAAGGAATTACCTGGGAA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCAGAAGATACCAAGCTaGTCTGGTGCTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLQKIPS*SGAQAD
Trigger: ATCTGCTTGAGCACCAGACAAGCTTGGTATCTTCTG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGTCTGTCCAAGCCTTTaGAAGGCCGAGAAGACACTG +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFVCPSL*KAEKTL
Trigger: CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGAC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTGGCCCACAGAGCTTTaGGCTGTCCTCTCTGAACGC +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGWPTEL*AVLSER
Trigger: GCGTTCAGAGAGGACAGCCAAAAGCTCTGTGGGCCA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp GCACTAGTCCACACTCGATGTATTTCTATTTTTGAGAGGTCACTGTaGTGGTATGAAGGTAAAACAAGGCTGGCTGACCGAGAAACTACC +
Preference number: 5 (lower is better)
Translates to: ALVHTRCISIFERSL*WYEGKTRLADRETT
Trigger: GGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTTCATACCAGCACAGTGACCTCTCAAAAATAGAAATACATCGAGTGTGGACTAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp CTAGTCCACACTCGATGTATTTCTATTTTTGAGAGGTCACTGTGCTaGTATGAAGGTAAAACAAGGCTGGCTGACCGAGAAACTACCAGC +
Preference number: 5 (lower is better)
Translates to: LVHTRCISIFERSLC*YEGKTRLADRETTS
Trigger: GCTGGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTTCATACCAGCACAGTGACCTCTCAAAAATAGAAATACATCGAGTGTGGACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGCTTTGCCGAGTTCGTaGTTCTTCAGGCACTCCAGC +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTALPSS*FFRHSS
Trigger: GCTGGAGTGCCTGAAGAACAACGAACTCGGCAAAGC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATTCAGCTCCATCAGCTaGGTGCAGATCTCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTFSSIS*VQISVR
Trigger: CCTGACCGAGATCTGCACCAAGCTGATGGAGCTGAA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTTCAGCTCCATCAGCTaGGTGCAGATCTCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWFSSIS*VQISVR
Trigger: CCTGACCGAGATCTGCACCAAGCTGATGGAGCTGAA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTCAGCTCCATCAGCTaGGTGCAGATCTCGGTCAGG +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGFSSIS*VQISVR
Trigger: CCTGACCGAGATCTGCACCAAGCTGATGGAGCTGAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACTGTCTGGGTCCACATaGATGGGTAGCATGGTTGGC +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLSGST*MGSMVG
Trigger: GCCAACCATGCTACCCATCAATGTGGACCCAGACAG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTGTCTGGGTCCACATaGATGGGTAGCATGGTTGGC +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLSGST*MGSMVG
Trigger: GCCAACCATGCTACCCATCAATGTGGACCCAGACAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGGGGTCTTCTCCACGTaGCAGAGATTTTGTCAATGG +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSGVFST*QRFCQW
Trigger: CCATTGACAAAATCTCTGCAACGTGGAGAAGACCCC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGATGACCTGATCAAATaGGGGGTCTTCTCCACGTTG +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSDDLIK*GVFSTL
Trigger: CAACGTGGAGAAGACCCCCAATTTGATCAGGTCATC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGAACAGCTTCAGCCTTaGAACCCTCAGAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCEQLQP*NPQKSA
Trigger: TGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTTC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCTGCTGGGAGTTCATaGATGGAACTAGAAAGATCA +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNAAGSS*MELERS
Trigger: TGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCTAACACACTGAACTaGAGCTTGTCCAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSNTLN*SLSRSP
Trigger: TGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTATGTTGCCTTACAATTaGCAAGCCAAGAGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLMLPYN*QAKRVW
Trigger: CCACACTCTCTTGGCTTGCAAATTGTAAGGCAACAT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTATGTTGCCTTACAATTaGCAAGCCAAGAGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLMLPYN*QAKRVW
Trigger: CCACACTCTCTTGGCTTGCAAATTGTAAGGCAACAT...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTATCCCCCTGCAAATGTaGCCTTACAATTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCIPLQM*PYNLQA
Trigger: GGCTTGCAAATTGTAAGGCAACATTTGCAGGGGGAT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATTTACAGCAGGGAATTaGGCTTGTGCCAACACTCCA +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQFTAGN*ACANTP
Trigger: TGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAAA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTTTACAGCAGGGAATTaGGCTTGTGCCAACACTCCA +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCFTAGN*ACANTP
Trigger: TGGAGTGTTGGCACAAGCCAAATTCCCTGCTGTAAA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTGCAACTCGAGCCATCTaGGGATCTTTGTTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLATRAI*GSLFLR
Trigger: CCTTAAAAACAAAGATCCCAAGATGGCTCGAGTTGC...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCAACTCGAGCCATCTaGGGATCTTTGTTTTTAAGG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNATRAI*GSLFLR
Trigger: CCTTAAAAACAAAGATCCCAAGATGGCTCGAGTTGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTACACCGCGGGACCCTTaGGGGAAAAGTGTTGTGATG +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGTPRDP*GKSVVM
Trigger: CATCACAACACTTTTCCCCAAAGGGTCCCGCGGTGT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATCCCGGAGCAGGAAGTaGGTAAAGCCAAATAGTACA +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSRSRK*VKPNST
Trigger: TGTACTATTTGGCTTTACCAACTTCCTGCTCCGGGA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGTGGTGCCTCAGACTTaGCTGGGGGAAGAGAAATCT +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLVVPQT*LGEEKS
Trigger: AGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCAC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCAGCCAGATGCAAGTaGGTAGGAACCTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLAARCK*VGTCVA
Trigger: TGCTACACAGGTTCCTACCAACTTGCATCTGGCTGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACAAGGTGATCCTCAGGTaGTTGCTCCATTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNKVILR*LLHFSL
Trigger: CAATGAGAAATGGAGCAACAACCTGAGGATCACCTT...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAAAGGTGATCCTCAGGTaGTTGCTCCATTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPKVILR*LLHFSL
Trigger: CAATGAGAAATGGAGCAACAACCTGAGGATCACCTT...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTAAGGTGATCCTCAGGTaGTTGCTCCATTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLKVILR*LLHFSL
Trigger: CAATGAGAAATGGAGCAACAACCTGAGGATCACCTT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGATCCTCCAGAGCTATaGCTGTATCTTGACTCGAGG +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSDPPEL*LYLDSR
Trigger: CCTCGAGTCAAGATACAGCAATAGCTCTGGAGGATC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAAGGGCTGCGGCTGCTaGGTCTCTGTAATAGTCAGC +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTKGCGC*VSVIVS
Trigger: GCTGACTATTACAGAGACCAAGCAGCCGCAGCCCTT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAAAATTACAGCAATATaGCACCTGTGGAGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCKITAI*HLWSGP
Trigger: GGGGCCACTCCACAGGTGCAATATTGCTGTAATTTT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGAATGGAAATTGCTGTaGCAAGAGAGGGCAATCAAG +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPEWKLL*QERAIK
Trigger: CTTGATTGCCCTCTCTTGCAACAGCAATTTCCATTC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCATAGAGATATTCAGGTaGGTAGGCTGGCTGCACGGT +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSIEIFR*VGWLHG
Trigger: ACCGTGCAGCCAGCCTACCAACCTGAATATCTCTAT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCACCTCCACCAATCTaGAGAGAAGGTCAGATAAGG +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCSPPPI*REGQIR
Trigger: CCTTATCTGACCTTCTCTCAAGATTGGTGGAGGTGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTATGACACCAAACTTCTaGGGCACAGAGAAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCMTPNF*GTEKLR
Trigger: ACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCAT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAATGGTGGCCAGCAGGTaGGTGGGATGGTTTATGTGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQMVASR*VGWFMW
Trigger: CCACATAAACCATCCCACCAACCTGCTGGCCACCAT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAATGGTGGCCAGCAGGTaGGTGGGATGGTTTATGTGG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTMVASR*VGWFMW
Trigger: CCACATAAACCATCCCACCAACCTGCTGGCCACCAT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAATCCACCATGGATATTTaGGACACTGGTGTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQSTMDI*DTGVSR
Trigger: TCTGCTGACACCAGTGTCCAAAATATCCATGGTGGA...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTCCACCATGGATATTTaGGACACTGGTGTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCSTMDI*DTGVSR
Trigger: TCTGCTGACACCAGTGTCCAAAATATCCATGGTGGA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTCCACATTGAACTGTTaGACAGGAACGACAGAAAGG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLSTLNC*TGTTER
Trigger: CCTTTCTGTCGTTCCTGTCAAACAGTTCAATGTGGA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGACTGGAACAAGGACGTaGGAGTTGGAGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLTGTRT*ELEPEE
Trigger: TTCCTCAGGCTCCAACTCCAACGTCCTTGTTCCAGT...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCTCAATCCTACTTCTaGGCCACACAGAGAAAGGAC +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFAQSYF*ATQRKD
Trigger: GTCCTTTCTCTGTGTGGCCAAGAAGTAGGATTGAGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GTAACAAGAGGGAGAACAGTCTGTCCAAGCCTTTTGAAGGCCGAGAAGACACTGATCACTGATGGATTTTaGCTCAATCCTACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: VTRGRTVCPSLLKAEKTLITDGF*LNPTSW
Trigger: CCAAGAAGTAGGATTGAGCAAAAATCCATCAGTGAT...CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGACTGTTCTCCCTCTTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTGATAGCTGCGGTGTCCTCTAAAACAGTGCCTAGCCCAGAGTGGGCATGCAATTTGGTTCTTATAGTATaGCTACACGTTGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LIAAVSSKTVPSPEWACNLVLIV*LHVGSS
Trigger: AGAACTTCCAACGTGTAGCAATACTATAAGAACCAA...ATTGCATGCCCACTCTGGGCTAGGCACTGTTTTAGAGGACACCGCAGCTATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTTCTTCAGTAGCGAGTaGCATATGCTCGGTCAAATG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLFFSSE*HMLGQM
Trigger: CATTTGACCGAGCATATGCAACTCGCTACTGAAGAA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATTCTTCAGTAGCGAGTaGCATATGCTCGGTCAAATG +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPFFSSE*HMLGQM
Trigger: CATTTGACCGAGCATATGCAACTCGCTACTGAAGAA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGTAGATCTAAAGTTATaGCTGGGCTCTGCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTVDLKL*LGSAGV
Trigger: CACGCCAGCAGAGCCCAGCAATAACTTTAGATCTAC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCAGTGGCTTCCCATCTaGCTCAGCAAGGGACAAAGT +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLQWLPI*LSKGQS
Trigger: ACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTGCTTTACCCTGCACTaGTTTGGGAAGCTTAACAAG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNCFTLH*FGKLNK
Trigger: CTTGTTAAGCTTCCCAAACAAGTGCAGGGTAAAGCA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS GCA 90 bp TGTGCCAACACTCCAATGACTTCTGCATACAGGTCTGCCACAATATaGATATTGCCAGTGTTGGGACCAAGGTACCCTTCTTTGTATTTA +
Preference number: 5 (lower is better)
Translates to: CANTPMTSAYRSATI*ILPVLGPRYPSLYL
Trigger: TAAATACAAAGAAGGGTACCTTGGTCCCAACACTGGCAATATGCATATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTGTTGGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp CTATTTTTGAGAGGTCACTGTGCTGGTATGAAGGTAAAACAAGGCTaGCTGACCGAGAAACTACCAGCTTCAAGATATTCAGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: LFLRGHCAGMKVKQG*LTEKLPASRYSELL
Trigger: GAGAAGCTCTGAATATCTTGAAGCTGGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTTCATACCAGCACAGTGACCTCTCAAAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCACTCACTGTATCCGTTTaGTTCTTCATGGCACTAATC +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLTVSV*FFMALI
Trigger: GATTAGTGCCATGAAGAACAAAACGGATACAGTGAG...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCACGTTGCAGAGATTTaGTCAATGGCTTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSHVAEI*SMAFPG
Trigger: CCCTGGAAAAGCCATTGACAAAATCTCTGCAACGTG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGAACAGCTTCAGCCTTaGAACCCTCAGAAATCTGCA +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFEQLQP*NPQKSA
Trigger: TGCAGATTTCTGAGGGTTCAAAGGCTGAAGCTGTTC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGAAGAGCTGACAAATTaGGATCCGATTCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQEELTN*DPIPRR
Trigger: CCTCCGGGGAATCGGATCCAAATTTGTCAGCTCTTC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTACACTGAACTTGAGCTaGTCCAGAAGTCCACATGAA +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCTLNLS*SRSPHE
Trigger: TTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACACTGAACTTGAGCTaGTCCAGAAGTCCACATGAA +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQTLNLS*SRSPHE
Trigger: TTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGAAGTCCACATGAAAGGAGAGTCTCGGCATCCACAAAAAGTGTAGGACATTCAATGTTGCCTTACAATTaGCAAGCCAAGAGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: RSPHERRVSASTKSVGHSMLPYN*QAKRVW
Trigger: CCACACTCTCTTGGCTTGCAAATTGTAAGGCAACAT...TGAATGTCCTACACTTTTTGTGGATGCCGAGACTCTCCTTTCATGTGGACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTATGGGTTCTGCTCTTaGTGCCGTAATTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLYGFCS*CRNSFS
Trigger: GCTAAAAGAATTACGGCACAAAGAGCAGAACCCATA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTATGGGTTCTGCTCTTaGTGCCGTAATTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNYGFCS*CRNSFS
Trigger: GCTAAAAGAATTACGGCACAAAGAGCAGAACCCATA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTATGGGTTCTGCTCTTaGTGCCGTAATTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFYGFCS*CRNSFS
Trigger: GCTAAAAGAATTACGGCACAAAGAGCAGAACCCATA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCATGCTTGATATCTTaGTCTTTGACCTCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQACLIS*SLTSRK
Trigger: CTTCCTCGAGGTCAAAGACAAAGATATCAAGCATGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCCATCTTGGGATCTTaGTTTTTAAGGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNAILGS*FLRLDK
Trigger: CTTGTCCAACCTTAAAAACAAAGATCCCAAGATGGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATTCATTCTCTCTGGGTaGAGACTGAATGCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPFILSG*RLNAFA
Trigger: AGCAAAAGCATTCAGTCTCAACCCAGAGAGAATGAA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGCAGTGCTGGTTTTCTaGGCATTAATTGGGCTATTT +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPAVLVF*ALIGLF
Trigger: AAATAGCCCAATTAATGCCAAGAAAACCAGCACTGC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGTGGTGCCTCAGACTTaGCTGGGGGAAGAGAAATCT +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWVVPQT*LGEEKS
Trigger: AGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCAC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCAGCCAGATGCAAGTaGGTAGGAACCTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWAARCK*VGTCVA
Trigger: TGCTACACAGGTTCCTACCAACTTGCATCTGGCTGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAACAGTTGCTATGGCTTaGAAGCAGCCAGATGCAAGT +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTTVAMA*KQPDAS
Trigger: ACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTTTGGTGTCAGAGGCCTaGAATAGAACAAGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLVSEA*NRTRFN
Trigger: GTTAAACCTTGTTCTATTCAAGGCCTCTGACACCAA...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTCTCCATTTCTCATTGTaGGCTAAAGCATTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLLHFSL*AKAFQA
Trigger: TGCTTGGAATGCTTTAGCCAACAATGAGAAATGGAG...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGATTCTTTCAATATCTaGTTCTCCTCAGCATCTGGG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLDSFNI*FSSASG
Trigger: CCCAGATGCTGAGGAGAACAAGATATTGAAAGAATC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAAAATTACAGCAATATaGCACCTGTGGAGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFKITAI*HLWSGP
Trigger: GGGGCCACTCCACAGGTGCAATATTGCTGTAATTTT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCTGTGCTCTTTCTGCTaGCTGTTAGTTTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSLCSFC*LLVYCW
Trigger: CCAGCAGTAAACTAACAGCAAGCAGAAAGAGCACAG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTGTGCTCTTTCTGCTaGCTGTTAGTTTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLCSFC*LLVYCW
Trigger: CCAGCAGTAAACTAACAGCAAGCAGAAAGAGCACAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGACAAGGACGTTGGAGTaGGAGCCTGAGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWTRTLE*EPEEVE
Trigger: TTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTGT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAACAAGGACGTTGGAGTaGGAGCCTGAGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQTRTLE*EPEEVE
Trigger: TTCCACTTCCTCAGGCTCCAACTCCAACGTCCTTGT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTCTGTCCAAGCCTTTaGAAGGCCGAGAAGACACTG +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVCPSL*KAEKTL
Trigger: CAGTGTCTTCTCGGCCTTCAAAAGGCTTGGACAGAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTTTCTTCAGTAGCGAGTaGCATATGCTCGGTCAAATG +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCFFSSE*HMLGQM
Trigger: CATTTGACCGAGCATATGCAACTCGCTACTGAAGAA...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTTGAAGCTCACAGTTTaGATGCCAACTTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLLKLTV*MPTSKE
Trigger: CTCTTTGGAAGTTGGCATCAAAACTGTGAGCTTCAA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGGTACTTCTACTTCTTaGTATCCCTGGGGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFGTSTS*YPWGRQ
Trigger: TTGCCTTCCCCAGGGATACAAAGAAGTAGAAGTACC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCGGTACTTCTACTTCTTaGTATCCCTGGGGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSGTSTS*YPWGRQ
Trigger: TTGCCTTCCCCAGGGATACAAAGAAGTAGAAGTACC...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCATTTCACCCGGTCATaGGCTTCCTTGCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGHFTRS*ASLLSL
Trigger: AAGGGACAGCAAGGAAGCCAATGACCGGGTGAAATG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACAGTGGCTTCCCATCTaGCTCAGCAAGGGACAAAGT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTQWLPI*LSKGQS
Trigger: ACTTTGTCCCTTGCTGAGCAAGATGGGAAGCCACTG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGCAAACACAGTCACCTTaGCTCATCCAGGCTTTATCT +
Preference number: 5 (lower is better)
Translates to: RCLLANTVTFAHPGFISLQTQSP*LIQALS
Trigger: AGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTG...CAAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS TCA 90 bp ACGTGGCACAGTCCCTCGTGTAGCTGTGCGTTTTATAAAGAGTCATaGCATGTGCAAGATTTGAAAGTTTGGGGTTCTTCTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: TWHSPSCSCAFYKES*HVQDLKVWGSSLLN
Trigger: GTTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTGCACATGTCATGACTCTTTATAAAACGCACAGCTACACGAGGGACTGTGCCACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp TTTCTCGGTTCTCAGCCTTATCGAGTGGCATATGTGCCAGTAGTCTaGTCAACAGCCTTAAGGCCATTAAGTATTCAAACTCAAAATCAG +
Preference number: 5 (lower is better)
Translates to: FLGSQPYRVAYVPVV*STALRPLSIQTQNQ
Trigger: CTGATTTTGAGTTTGAATACTTAATGGCCTTAAGGCTGTTGAGCAGACTACTGGCACATATGCCACTCGATAAGGCTGAGAACCGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGCACGTTGCAGAGATTTaGTCAATGGCTTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLHVAEI*SMAFPG
Trigger: CCCTGGAAAAGCCATTGACAAAATCTCTGCAACGTG...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGGGGTCTTCTCCACGTaGCAGAGATTTTGTCAATGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQGVFST*QRFCQW
Trigger: CCATTGACAAAATCTCTGCAACGTGGAGAAGACCCC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACATCTAACACACTGAACTaGAGCTTGTCCAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTSNTLN*SLSRSP
Trigger: TGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGA...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTATGTTGCCTTACAATTaGCAAGCCAAGAGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFMLPYN*QAKRVW
Trigger: CCACACTCTCTTGGCTTGCAAATTGTAAGGCAACAT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTGCATATTGCCAGTGTaGGGACCAAGGTACCCTTCT +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWCILPV*GPRYPS
Trigger: AGAAGGGTACCTTGGTCCCAACACTGGCAATATGCA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGCCACAATATGCATATaGCCAGTGTTGGGACCAAGG +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGATICI*PVLGPR
Trigger: CCTTGGTCCCAACACTGGCAATATGCATATTGTGGC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGAGCAGGGAATTTGGCTaGTGCCAACACTCCAATGAC +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSREFG*CQHSND
Trigger: GTCATTGGAGTGTTGGCACAAGCCAAATTCCCTGCT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGCAGGGAATTTGGCTaGTGCCAACACTCCAATGAC +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSREFG*CQHSND
Trigger: GTCATTGGAGTGTTGGCACAAGCCAAATTCCCTGCT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACATTCAGTGGCTTCTCTTTGTTTTTAAGGTaGGACAAGCAGTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: LNISHSMSLPCPQTFSGFSLFLR*DKQLLR
Trigger: CCTCAACAACTGCTTGTCCAACCTTAAAAACAAAGA...GAAGCCACTGAATGTTTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTACCCTGAAGAGAATTTaGTGCAATATGTCGCAATTC +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLTLKRI*CNMSQF
Trigger: GAATTGCGACATATTGCACAAAATTCTCTTCAGGGT...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAGGACCCAGGGGTCTTaGACAGACTGTGCAAATATC +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQRTQGS*TDCANI
Trigger: GATATTTGCACAGTCTGTCAAAGACCCCTGGGTCCT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAGCAGTGCTGGTTTTCTaGGCATTAATTGGGCTATTT +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQAVLVF*ALIGLF
Trigger: AAATAGCCCAATTAATGCCAAGAAAACCAGCACTGC...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCGTTCTCGGCGTTTCTaGTTCTCTGGTCTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWRSRRF*FSGLLS
Trigger: GGAAAGAAGACCAGAGAACAAGAAACGCCGAGAACG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACGTTCTCGGCGTTTCTaGTTCTCTGGTCTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTRSRRF*FSGLLS
Trigger: GGAAAGAAGACCAGAGAACAAGAAACGCCGAGAACG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCTCTAGGGCTCCATTaGTGCTGTCACTTATTACAC +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLALGLH*CCHLLH
Trigger: GTGTAATAAGTGACAGCACAAATGGAGCCCTAGAGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGCTCAGCGACTTTCTTaGAGTATACAAAAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLAQRLS*SIQKAL
Trigger: CAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAGC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGTCATGTACATGAGGTaGTTCAGGACCAGTGACGTG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQVMYMR*FRTSDV
Trigger: CACGTCACTGGTCCTGAACAACCTCATGTACATGAC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGTCATGTACATGAGGTaGTTCAGGACCAGTGACGTG +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGVMYMR*FRTSDV
Trigger: CACGTCACTGGTCCTGAACAACCTCATGTACATGAC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGTGATCCTCAGGTTGTaGCTCCATTTCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFVILRL*LHFSLL
Trigger: CAACAATGAGAAATGGAGCAACAACCTGAGGATCAC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGTCACCTCCACCAATCTaGAGAGAAGGTCAGATAAGG +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLSPPPI*REGQIR
Trigger: CCTTATCTGACCTTCTCTCAAGATTGGTGGAGGTGA...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAATGAGCTTCTGGTTTTaGAGGAGAGGCCTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTMSFWF*RRGLVG
Trigger: CCCAACAAGGCCTCTCCTCAAAAACCAGAAGCTCAT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCAGATGTATTTCTATTTTaGAGAGGTCACTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPDVFLF*RGHCAG
Trigger: ACCAGCACAGTGACCTCTCAAAAATAGAAATACATC...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGATGTATTTCTATTTTaGAGAGGTCACTGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLDVFLF*RGHCAG
Trigger: ACCAGCACAGTGACCTCTCAAAAATAGAAATACATC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTCTTGGGGTTATTACTTaGGCAACCCACATGCAAAAC +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLGVIT*ATHMQN
Trigger: GTTTTGCATGTGGGTTGCCAAAGTAATAACCCCAAG...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TGTTCCATAGAGAATACTTCCCGGTCTTTGCTCAGCGACTTTCTTTaGGTATACAAAAAGCTTTGCTTCAAGGATCTGCATGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: CSIENTSRSLLSDFL*VYKKLCFKDLHELH
Trigger: ATGCAGCTCATGCAGATCCTTGAAGCAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAGCAAAGACCGGGAAGTATTCTCTATGGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp AAACCTTTCATCAGATTCTTTCAATATCTTGTTCTCCTCAGCATCTaGGAAATTTTCCTGGCCAGCAACCACTGTATTGCTGCTAGAGGT +
Preference number: 5 (lower is better)
Translates to: KPFIRFFQYLVLLSI*EIFLASNHCIAARG
Trigger: ACCTCTAGCAGCAATACAGTGGTTGCTGGCCAGGAAAATTTCCCAGATGCTGAGGAGAACAAGATATTGAAAGAATCTGATGAAAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 90 bp AACAAACCTGAGCAATCCTTTCGGCTATATCCTTACAGAACTGATTaGGATTTTCAAAATGCTGAATCAGCTGAGGCAGGAGACACAAGA +
Preference number: 5 (lower is better)
Translates to: NKPEQSFRLYPYRTD*DFQNAESAEAGDTR
Trigger: TCTTGTGTCTCCTGCCTCAGCTGATTCAGCATTTTGAAAATCCCAATCAGTTCTGTAAGGATATAGCCGAAAGGATTGCTCAGGTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAATGGACACGAATTTTTaGTTGTTAAGGCAGGCATCA +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQMDTNF*LLRQAS
Trigger: TGATGCCTGCCTTAACAACAAAAAATTCGTGTCCAT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACACGTTGCAGAGATTTaGTCAATGGCTTTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQHVAEI*SMAFPG
Trigger: CCCTGGAAAAGCCATTGACAAAATCTCTGCAACGTG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGATCCCCCTGCAAATGTaGCCTTACAATTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWIPLQM*PYNLQA
Trigger: GGCTTGCAAATTGTAAGGCAACATTTGCAGGGGGAT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACCAGCCAAGGCATGCTaGATATCTTTGTCTTTGACC +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQPAKAC*ISLSLT
Trigger: GGTCAAAGACAAAGATATCAAGCATGCCTTGGCTGG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTGGACAAGCAGTTGTaGAGGAAAATGTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGLDKQL*RKMCHL
Trigger: CAGGTGGCACATTTTCCTCAACAACTGCTTGTCCAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCTTCATTCTCTCTGGGTaGAGACTGAATGCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSFILSG*RLNAFA
Trigger: AGCAAAAGCATTCAGTCTCAACCCAGAGAGAATGAA...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAGGTGCCTTAAAATGTaGTCTACAGCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCRCLKM*STAFRT
Trigger: AGTACGAAAAGCTGTAGACAACATTTTAAGGCACCT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAACCCTGAAGAGAATTTaGTGCAATATGTCGCAATTC +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQTLKRI*CNMSQF
Trigger: GAATTGCGACATATTGCACAAAATTCTCTTCAGGGT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTATTAAAACGGACAGTTaGCGTGTGGCCACCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGIKTDS*RVATWK
Trigger: TTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAAT...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAATTAAAACGGACAGTTaGCGTGTGGCCACCTGGAAA +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQIKTDS*RVATWK
Trigger: TTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAAT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTAACGCTCGAATTTCCTaGAGTATTAAAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCNARIS*SIKTDS
Trigger: ACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTT...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAAACGCTCGAATTTCCTaGAGTATTAAAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQNARIS*SIKTDS
Trigger: ACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCACTGCAGATCCACATaGTGGGTGAGTGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGHCRST*WVSGNV
Trigger: AACATTACCACTCACCCACAATGTGGATCTGCAGTG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACACTGCAGATCCACATaGTGGGTGAGTGGTAATGTT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTHCRST*WVSGNV
Trigger: AACATTACCACTCACCCACAATGTGGATCTGCAGTG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAACAGTTGCTATGGCTTaGAAGCAGCCAGATGCAAGT +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQTVAMA*KQPDAS
Trigger: ACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGACTTCATCTCCATACTaGGCCGTCATGTACATGAGG +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWTSSPY*AVMYMR
Trigger: CCTCATGTACATGACGGCCAAGTATGGAGATGAAGT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAACTTCATCTCCATACTaGGCCGTCATGTACATGAGG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTTSSPY*AVMYMR
Trigger: CCTCATGTACATGACGGCCAAGTATGGAGATGAAGT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAAAATTACAGCAATATaGCACCTGTGGAGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQKITAI*HLWSGP
Trigger: GGGGCCACTCCACAGGTGCAATATTGCTGTAATTTT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTGTGCTCTTTCTGCTaGCTGTTAGTTTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLCSFC*LLVYCW
Trigger: CCAGCAGTAAACTAACAGCAAGCAGAAAGAGCACAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAATGACACCAAACTTCTaGGGCACAGAGAAGCTTCGT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTMTPNF*GTEKLR
Trigger: ACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCAT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGCAAGATTTGAAAGTTaGGGGTTCTTCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNARFES*GFFSSK
Trigger: TTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTGC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTTTCCCAGGTAATTCCTaGGAAGCACTAGTCCACACT +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGFPGNS*EALVHT
Trigger: AGTGTGGACTAGTGCTTCCAAGGAATTACCTGGGAA...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATTCCCAGGTAATTCCTaGGAAGCACTAGTCCACACT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTFPGNS*EALVHT
Trigger: AGTGTGGACTAGTGCTTCCAAGGAATTACCTGGGAA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTTTTCAGTGGCCAGCTTGTACCAACTTCTCTTTaGTTCTCTTCTGAGAATACT +
Preference number: 5 (lower is better)
Translates to: HIHRLSAFDHLTVFSGQLVPTSL*FSSENT
Trigger: AGTATTCTCAGAAGAGAACAAAAGAGAAGTTGGTAC...AAGCTGGCCACTGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAGGAGTAATCCTTTTAAACATAAGTCACAGCATGTCACTACCCTGCCCGCAAATCACTGATGGATTTTaGCTCAATCCTACTTCTTGG +
Preference number: 5 (lower is better)
Translates to: EGVILLNISHSMSLPCPQITDGF*LNPTSW
Trigger: CCAAGAAGTAGGATTGAGCAAAAATCCATCAGTGAT...TTGCGGGCAGGGTAGTGACATGCTGTGACTTATGTTTAAAAGGATTACTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTCAGAAGATACCAAGCTaGTCTGGTGCTCAAGCAGAT +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGQKIPS*SGAQAD
Trigger: ATCTGCTTGAGCACCAGACAAGCTTGGTATCTTCTG...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CCATCCTCTTTAGAAAAAGCCCTACAGGTAACAAGAGGGAGAACAGTCTGTCCATTGGTTCTTATAGTATaGCTACACGTTGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: PSSLEKALQVTRGRTVCPLVLIV*LHVGSS
Trigger: AGAACTTCCAACGTGTAGCAATACTATAAGAACCAA...TGGACAGACTGTTCTCCCTCTTGTTACCTGTAGGGCTTTTTCTAAAGAGGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGGCTGTCAGCTTTaGACCATCTTACAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSTGCQL*TILQFS
Trigger: TGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGT...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACGTTGATTACAGAGAATaGGTTGAAGCTCACAGTTTT +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNVDYRE*VEAHSF
Trigger: AAAACTGTGAGCTTCAACCAATTCTCTGTAATCAAC...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGGTACTTCTACTTCTTaGTATCCCTGGGGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGGTSTS*YPWGRQ
Trigger: TTGCCTTCCCCAGGGATACAAAGAAGTAGAAGTACC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACGGAAGTCACTTTATCTACCCTTTCCTTaGGTACTTCTACTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: ERKVLFSVVGFGMQRKSLYLPFP*VLLLLC
Trigger: ACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGATA...AAGTGACTTCCGTTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGGTTATTACTTTGGCAACCCACATGCAAAACTTCATGTGTGCCCAGGACAAACTATCTACCCTTTCCTTaGGTACTTCTACTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: GLLLWQPTCKTSCVPRTNYLPFP*VLLLLC
Trigger: ACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGATA...GTTTGTCCTGGGCACACATGAAGTTTTGCATGTGGGTTGCCAAAGTAATAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp GCTGCATGGAGATTTCATAAATCTCTCTGTTGGTGTCAGAGGCCTTaGATAGAACAAGGTTTAACAATGTCACTATGTCGAAGGGATAGT +
Preference number: 5 (lower is better)
Translates to: AAWRFHKSLCWCQRP*IEQGLTMSLCRRDS
Trigger: ACTATCCCTTCGACATAGTGACATTGTTAAACCTTGTTCTATTCAAGGCCTCTGACACCAACAGAGAGATTTATGAAATCTCCATGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 90 bp TCTTCGGTGGTGAACTGGAACACACTGAATCAAGTTGGCCACCATTaGACTAAAATGTGCCCGGATATCTTTAAGAATTTCAACTTCTTT +
Preference number: 5 (lower is better)
Translates to: SSVVNWNTLNQVGHH*TKMCPDIFKNFNFF
Trigger: AAAGAAGTTGAAATTCTTAAAGATATCCGGGCACATTTTAGTGCAATGGTGGCCAACTTGATTCAGTGTGTTCCAGTTCACCACCGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTTCATGTGTGCCCAGGACAAACATTTTCATTAACCAGAAATAAAGTCCATGGTGCTGCTGGGAGTTCATaGATGGAACTAGAAAGATCA +
Preference number: 5 (lower is better)
Translates to: LHVCPGQTFSLTRNKVHGAAGSS*MELERS
Trigger: TGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGC...ACCATGGACTTTATTTCTGGTTAATGAAAATGTTTGTCCTGGGCACACATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGCTGCTGGGAGTTCATaGATGGAACTAGAAAGATCA +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQAAGSS*MELERS
Trigger: TGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGACACTGAACTTGAGCTaGTCCAGAAGTCCACATGAA +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWTLNLS*SRSPHE
Trigger: TTCATGTGGACTTCTGGACAAGCTCAAGTTCAGTGT...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTCTAACACACTGAACTaGAGCTTGTCCAGAAGTCCA +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWSNTLN*SLSRSP
Trigger: TGGACTTCTGGACAAGCTCAAGTTCAGTGTGTTAGA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GGAGGCATCTTTCTTATCACTGAGGCATCTGTTAAATATCTACCCTTTCCTTTGGCCATCTTGGGATCTTaGTTTTTAAGGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: GGIFLITEASVKYLPFPLAILGS*FLRLDK
Trigger: CTTGTCCAACCTTAAAAACAAAGATCCCAAGATGGC...CAAAGGAAAGGGTAGATATTTAACAGATGCCTCAGTGATAAGAAAGATGCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAAGGTGCCTTAAAATGTaGTCTACAGCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTRCLKM*STAFRT
Trigger: AGTACGAAAAGCTGTAGACAACATTTTAAGGCACCT...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGGTGCCTTAAAATGTaGTCTACAGCTTTTCGTACT +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFRCLKM*STAFRT
Trigger: AGTACGAAAAGCTGTAGACAACATTTTAAGGCACCT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGTGATCCTCAGGTTGTaGCTCCATTTCTCATTGTTG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTVILRL*LHFSLL
Trigger: CAACAATGAGAAATGGAGCAACAACCTGAGGATCAC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAAGCTCTTCCATGGTTaGAATGGTGTTGTTACGGCA +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTKLFHG*NGVVTA
Trigger: TGCCGTAACAACACCATTCAAACCATGGAAGAGCTT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAAGCTCTTCCATGGTTaGAATGGTGTTGTTACGGCA +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQKLFHG*NGVVTA
Trigger: TGCCGTAACAACACCATTCAAACCATGGAAGAGCTT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGAATGGAAATTGCTGTaGCAAGAGAGGGCAATCAAG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQEWKLL*QERAIK
Trigger: CTTGATTGCCCTCTCTTGCAACAGCAATTTCCATTC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGAATGGAAATTGCTGTaGCAAGAGAGGGCAATCAAG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTEWKLL*QERAIK
Trigger: CTTGATTGCCCTCTCTTGCAACAGCAATTTCCATTC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTAGAAACTCAATGAGCTaGTTTGCCTTCTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFRNSMS*FAFSSV
Trigger: AACAGATGAGAAGGCAAACAAGCTCATTGAGTTTCT...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TATGCAACGGAAGTCACTTCTTCAGTAGCGAGTTGCATATGCTCGGTCAAATGTGCAAGATTTGAAAGTTaGGGGTTCTTCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: YATEVTSSVASCICSVKCARFES*GFFSSK
Trigger: TTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTGC...ACATTTGACCGAGCATATGCAACTCGCTACTGAAGAAGTGACTTCCGTTGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATCCACATTGAACTGTTaGACAGGAACGACAGAAAGG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTSTLNC*TGTTER
Trigger: CCTTTCTGTCGTTCCTGTCAAACAGTTCAATGTGGA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTTCTTCAGTAGCGAGTaGCATATGCTCGGTCAAATG +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWFFSSE*HMLGQM
Trigger: CATTTGACCGAGCATATGCAACTCGCTACTGAAGAA...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CTCGCATGTTCCAGCATACTGGTAGACCTATTTATTGTAACCAACGATATTCCAAGGCTTTCTGAAGTTTaGACCCATATGCTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LACSSILVDLFIVTNDIPRLSEV*THMLLV
Trigger: AACAAGCAGCATATGGGTCAAAACTTCAGAAAGCCT...TGGAATATCGTTGGTTACAATAAATAGGTCTACCAGTATGCTGGAACATGCGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CAA 90 bp CGTTGTCTGTTAGCAAACACAGTCACCTTTGCTCATCCAGGCTTTATCTCTTTGTGGAAGTTCTGGCCTTaGTTTTTCTCATATTGTTCT +
Preference number: 5 (lower is better)
Translates to: RCLLANTVTFAHPGFISLWKFWP*FFSYCS
Trigger: AGAACAATATGAGAAAAACAAAGGCCAGAACTTCCA...CAAAGAGATAAAGCCTGGATGAGCAAAGGTGACTGTGTTTGCTAACAGACAACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCTCACTGTATCCGTTTaGTTCTTCATGGCACTAATC +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLTVSV*FFMALI
Trigger: GATTAGTGCCATGAAGAACAAAACGGATACAGTGAG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATATGGGTTCTGCTCTTaGTGCCGTAATTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTYGFCS*CRNSFS
Trigger: GCTAAAAGAATTACGGCACAAAGAGCAGAACCCATA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAGCCATCTTGGGATCTTaGTTTTTAAGGTTGGACAAG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTAILGS*FLRLDK
Trigger: CTTGTCCAACCTTAAAAACAAAGATCCCAAGATGGC...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATTCATTCTCTCTGGGTaGAGACTGAATGCTTTTGCT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTFILSG*RLNAFA
Trigger: AGCAAAAGCATTCAGTCTCAACCCAGAGAGAATGAA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGGCAGTGCTGGTTTTCTaGGCATTAATTGGGCTATTT +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWAVLVF*ALIGLF
Trigger: AAATAGCCCAATTAATGCCAAGAAAACCAGCACTGC...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATTGGTGTCAGAGGCCTaGAATAGAACAAGGTTTAAC +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLVSEA*NRTRFN
Trigger: GTTAAACCTTGTTCTATTCAAGGCCTCTGACACCAA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACTCCATTTCTCATTGTaGGCTAAAGCATTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQLHFSL*AKAFQA
Trigger: TGCTTGGAATGCTTTAGCCAACAATGAGAAATGGAG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CAATCTAAAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGCTCCATTTCTCATTGTaGGCTAAAGCATTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: QSKIVSRKEGTVQCSRLWLHFSL*AKAFQA
Trigger: TGCTTGGAATGCTTTAGCCAACAATGAGAAATGGAG...CCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTTTAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AGATCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCCCGTGTAGGGAGAAATaGGATCATTTTTATCTTCAT +
Preference number: 5 (lower is better)
Translates to: RSLLRYHLIRVIAKIALSPCREK*DHFYLH
Trigger: ATGAAGATAAAAATGATCCAATTTCTCCCTACACGG...GGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGCAAGATTTGAAAGTTaGGGGTTCTTCTCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFARFES*GFFSSK
Trigger: TTTAGAAGAGAAGAACCCCAAACTTTCAAATCTTGC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATTCAGAACTTCCACATaGAACTGTTTGACAGGAACG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTFRTST*NCLTGT
Trigger: CGTTCCTGTCAAACAGTTCAATGTGGAAGTTCTGAA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp TCTCTCCTCAGATATCACCTTATTAGAGTGATAGCTAAGATAGCCCTGTCCACAGTACCAACTTCTCTTTaGTTCTCTTCTGAGAATACT +
Preference number: 5 (lower is better)
Translates to: SLLRYHLIRVIAKIALSTVPTSL*FSSENT
Trigger: AGTATTCTCAGAAGAGAACAAAAGAGAAGTTGGTAC...TGTGGACAGGGCTATCTTAGCTATCACTCTAATAAGGTGATATCTGAGGAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTTTGGTTCTTATAGTATaGCTACACGTTGGAAGTTCT +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFLVLIV*LHVGSS
Trigger: AGAACTTCCAACGTGTAGCAATACTATAAGAACCAA...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAACAGGCTGTCAGCTTTaGACCATCTTACAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTTGCQL*TILQFS
Trigger: TGAAAACTGTAAGATGGTCAAAAGCTGACAGCCTGT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACATTGAAGCTCACAGTTTaGATGCCAACTTCCAAAGAG +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTLKLTV*MPTSKE
Trigger: CTCTTTGGAAGTTGGCATCAAAACTGTGAGCTTCAA...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp GCTACCTTGGTTCTTATAGTATTGCTACACGTTGGAAGTTCTGCCATCCTCTTTGTTCTGGAATATAAATaGCTGTCATCAACTGCCATT +
Preference number: 5 (lower is better)
Translates to: ATLVLIVLLHVGSSAILFVLEYK*LSSTAI
Trigger: AATGGCAGTTGATGACAGCAATTTATATTCCAGAAC...AAAGAGGATGGCAGAACTTCCAACGTGTAGCAATACTATAAGAACCAAGGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATCTTTGTTTTTAAGGTaGGACAAGCAGTTGTTGAGG +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQSLFLR*DKQLLR
Trigger: CCTCAACAACTGCTTGTCCAACCTTAAAAACAAAGA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAACGCTCGAATTTCCTaGAGTATTAAAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQNARIS*SIKTDS
Trigger: ACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAACGCTCGAATTTCCTaGAGTATTAAAACGGACAGT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTNARIS*SIKTDS
Trigger: ACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACAAGAAACTCAATGAGCTaGTTTGCCTTCTCATCTGTT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTRNSMS*FAFSSV
Trigger: AACAGATGAGAAGGCAAACAAGCTCATTGAGTTTCT...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp CATTTACAATTCCCTTTTCACATACACAGGCTGTCAGCTTTTGACCATCTTACACCGTGTAGGGAGAAATaGGATCATTTTTATCTTCAT +
Preference number: 5 (lower is better)
Translates to: HLQFPFHIHRLSAFDHLTPCREK*DHFYLH
Trigger: ATGAAGATAAAAATGATCCAATTTCTCCCTACACGG...TGTAAGATGGTCAAAAGCTGACAGCCTGTGTATGTGAAAAGGGAATTGTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAACCGTGTAGGGAGAAATaGGATCATTTTTATCTTCAT +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQPCREK*DHFYLH
Trigger: ATGAAGATAAAAATGATCCAATTTCTCCCTACACGG...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAGTACCAACTTCTCTTTaGTTCTCTTCTGAGAATACT +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQVPTSL*FSSENT
Trigger: AGTATTCTCAGAAGAGAACAAAAGAGAAGTTGGTAC...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAAAATAGCCGACAAGATTaGACTGGTAGATCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQNSRQD*TGRSKV
Trigger: AACTTTAGATCTACCAGTCAAATCTTGTCGGCTATT...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS-3UTR CAA 90 bp AAATTGTTTCTAGAAAGGAAGGTACTGTTCAGTGTAGTCGGCTTTGGTATGCAATATCTACCCTTTCCTTaGGTACTTCTACTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: KLFLERKVLFSVVGFGMQYLPFP*VLLLLC
Trigger: ACAAAGAAGTAGAAGTACCAAAGGAAAGGGTAGATA...TTGCATACCAAAGCCGACTACACTGAACAGTACCTTCCTTTCTAGAAACAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000542859.6
ENST00000645780.1
ENST00000647500.1
CDS TCA 90 bp TTCTTGTTCTCTGGTCTTCTTTCCAGAGCTTCTTTCATTAATGGATaGAGTTCTTCTACCAATTCTCTGAAAACAAGGGAATTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: FLFSGLLSRASFING*SSSTNSLKTREFVL
Trigger: AAGAACAAATTCCCTTGTTTTCAGAGAATTGGTAGAAGAACTTCATCCATTAATGAAAGAAGCTCTGGAAAGAAGACCAGAGAACAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GGAACCTGGTGCCGCCACCGCCTGCGCTCCCTGCGCTaGGCTGCGCTCGCTGCGCCCGGGCTCTGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: GTWCRHRLRSLR*AALAAPGLCCP
Trigger: CGGGCAGCAGAGCCCGGGCGCAGCGAGCGCAGCGCAGCGCAGGGAGCGCAGGCGGTGGCGGCACCAGGTTCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645780.1
CDS GCA 72 bp GGAGGGAGGGTTTCTAGGCCGGCCTCCCTGACGCGGTaGAGGCAGCCTCCGGCCCACACGGCCGCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: GGRVSRPASLTR*RQPPAHTAAAG
Trigger: CCCCGCGGCGGCCGTGTGGGCCGGAGGCTGCCTGCACCGCGTCAGGGAGGCCGGCCTAGAAACCCTCCCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS CCA 72 bp TGCCACCGCCGGAGGCTACTTCGCTGCGCCGAGCGCTaGAGCCCCGGGAACCTGGTGCCGCCACCGCCTGCG +
Preference number: 6 (lower is better)
Translates to: CHRRRLLRCAER*SPGNLVPPPPA
Trigger: CGCAGGCGGTGGCGGCACCAGGTTCCCGGGGCTCCAGCGCTCGGCGCAGCGAAGTAGCCTCCGGCGGTGGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645780.1
CDS GCA 72 bp AGACCCACAGCATCGCCCCGGCGCCGCCGCCGTAGTTaGCACCGCCGGAGGCTACTTCGCTGCGCCGAGCGC +
Preference number: 6 (lower is better)
Translates to: RPTASPRRRRRS*HRRRLLRCAER
Trigger: GCGCTCGGCGCAGCGAAGTAGCCTCCGGCGGTGGCAACTACGGCGGCGGCGCCGGGGCGATGCTGTGGGTCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645780.1
CDS GCA 72 bp GATGTCAGCGCGGGGTCAGGCGCCCAGAGGCAGCTCTaGGGATCCACCTCCGGCTCCGGCCGGGAGTGCTCA +
Preference number: 6 (lower is better)
Translates to: DVSAGSGAQRQL*GSTSGSGRECS
Trigger: TGAGCACTCCCGGCCGGAGCCGGAGGTGGATCCGCAGAGCTGCCTCTGGGCGCCTGACCCCGCGCTGACATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS CCA 72 bp CTGCTGGCTGGCCATGTCTGCGGCATACAAAGAGGCTaGGAGGACGGGCAGCGGCCGGGAGCAGGTACCGGG +
Preference number: 6 (lower is better)
Translates to: LLAGHVCGIQRG*EDGQRPGAGTG
Trigger: CCCGGTACCTGCTCCCGGCCGCTGCCCGTCCTCCCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS CAA 90 bp TGCTCGGCCGCTCCTCCTCCTCCGGGTCCAGGACTTGCTTCTTATTaGCTGGACGCTGATCTCCCTGCAGCCCTCGGAGGCGGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: CSAAPPPPGPGLASY*LDADLPAALGGGGR
Trigger: GCGGCCGCCGCCTCCGAGGGCTGCAGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTCCTGGACCCGGAGGAGGAGGAGCGGCCGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS TCA 72 bp CGCCAGGCCTCCTCGGCATCGTCACAGGCTGCGGGCTaGAAGGCGGCAAGGATGGCTGAGAAGAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: RQASSASSQAAG*KAARMAEKKGE
Trigger: CTCGCCCTTCTTCTCAGCCATCCTTGCCGCCTTTCAGCCCGCAGCCTGTGACGATGCCGAGGAGGCCTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp AGTTGGAGCCTGAGGAAGTGGAAGATGTGCTCCGGGTaGCGGCCATGGCCCTGGGCTTCCCATCACGCCCAG +
Preference number: 6 (lower is better)
Translates to: SWSLRKWKMCSG*RPWPWASHHAQ
Trigger: CTGGGCGTGATGGGAAGCCCAGGGCCATGGCCGTCACCCGGAGCACATCTTCCACTTCCTCAGGCTCCAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CAGCTCTGCGGATCCACCTCCGGCTCCGGCCGGGAGTaGTCATCTAAAGGACACGGCGGAGCAGAGAGAGAT +
Preference number: 6 (lower is better)
Translates to: QLCGSTSGSGRE*SSKGHGGAERD
Trigger: ATCTCTCTCTGCTCCGCCGTGTCCTTTAGATGAGCACTCCCGGCCGGAGCCGGAGGTGGATCCGCAGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS GCA 72 bp CTCAAAGAAGCCCGAATCCTGCTGGCTGGCCATGTCTaGGGCATACAAAGAGGCTGGGAGGACGGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: LKEARILLAGHV*GIQRGWEDGQR
Trigger: CCGCTGCCCGTCCTCCCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS GCA 72 bp CTCCTCCTCCTCCGGGTCCAGGACTTGCTTCTTATTTaGTGGACGCTGATCTCCCTGCAGCCCTCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: LLLLRVQDLLLI*WTLISLQPSEA
Trigger: CGCCTCCGAGGGCTGCAGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTCCTGGACCCGGAGGAGGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS CCA 72 bp TGGCGGCCCTTTCTCCCTGTGCGTGCCAGAAGCAGGTaGAACCGGAGGCTTGATGTAACCGTTGCCAACGGG +
Preference number: 6 (lower is better)
Translates to: WRPFLPVRARSR*NRRLDVTVANG
Trigger: CCCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACGCACAGGGAGAAAGGGCCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000436046.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp GCTCCTCCTCCTCCGGGTCCAGGACTTGCTTCTTATTaGCTGGACGCTGATCTCCCTGCAGCCCTCGGAGGC +
Preference number: 6 (lower is better)
Translates to: APPPPGPGLASY*LDADLPAALGG
Trigger: GCCTCCGAGGGCTGCAGGGAGATCAGCGTCCAGCAAATAAGAAGCAAGTCCTGGACCCGGAGGAGGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS TCA 72 bp AGTGGACGTGAAGGTGGGCTCGGACCACGCGCCGTCTaGATAGAGAGGGTCAGCTGCAATGACTGCACTGGC +
Preference number: 6 (lower is better)
Translates to: SGREGGLGPRAV*IERVSCNDCTG
Trigger: GCCAGTGCAGTCATTGCAGCTGACCCTCTCTATTCAGACGGCGCGTGGTCCGAGCCCACCTTCACGTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GGCCTGCCTGAGAAGCAGCTATTTAAGGAAGCTGCGTaGCCAGATGGGCAGGGGTGTGGCCAGCTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: GLPEKQLFKEAA*PDGQGCGQLSG
Trigger: GCCACTCAGCTGGCCACACCCCTGCCCATCTGGTCACGCAGCTTCCTTAAATAGCTGCTTCTCAGGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS TCA 72 bp GCTCCAGCCAGGTACGCAACCGAGGAAGACCCCACCTaGACTGGGATCGGCTTTCTTCTGGGAGGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: APARYATEEDPT*TGIGFLLGGRV
Trigger: AACCCTCCCTCCCAGAAGAAAGCCGATCCCAGTTCAGGTGGGGTCTTCCTCGGTTGCGTACCTGGCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642040.1
CDS GCA 72 bp GTGGTGAGGGATGTGAATCCTTTCAGCAGCAGCTGCTaGAGCCCGGAGAAGTCGGCCCACTTCAGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: VVRDVNPFSSSC*SPEKSAHFSCA
Trigger: GGCACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGGATTCACATCCCTCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp GCCGGCTCCGTTCGGCAGTTGCGGTGTTGCCGCTGGTaGTTCCCGGGTTCATGTTTAGTTGTCCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: AGSVRQLRCCRW*FPGSCLVVLCS
Trigger: AGAGCACAGGACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp GATGCCGGCTCCGTTCGGCAGTTGCGGTGTTGCCGCTaGTGGTTCCCGGGTTCATGTTTAGTTGTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: DAGSVRQLRCCR*WFPGSCLVVLC
Trigger: GCACAGGACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp CAGAGAAGCTTCGTTGATGCCGGCTCCGTTCGGCAGTaGCGGTGTTGCCGCTGGTGGTTCCCGGGTTCATGT +
Preference number: 6 (lower is better)
Translates to: QRSFVDAGSVRQ*RCCRWWFPGSC
Trigger: ACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp ACTCCAGCATGGACTGGATGGCTGCTTCAGTGGACGTaGAGGTGGGCTCGGACCACGCGCCGTCTGAATAGA +
Preference number: 6 (lower is better)
Translates to: TPAWTGWLLQWT*RWARTTRRLNR
Trigger: TCTATTCAGACGGCGCGTGGTCCGAGCCCACCTTCACGTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CCCTGTGCGTGCCAGAAGCAGGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGGGAGAAGCAAGCCCTT +
Preference number: 6 (lower is better)
Translates to: PCACQKQVEPEA*CNRCQREKQAL
Trigger: AAGGGCTTGCTTCTCCCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACGCACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436046.1
CDS TCA 72 bp TTCCTGAGGCTGCTGCGGAAGCCTTGCTACTGGCCGTaGAGCGGTAGAAGGGCGGGTTGTCACAATGCTGGA +
Preference number: 6 (lower is better)
Translates to: FLRLLRKPCYWP*SGRRAGCHNAG
Trigger: TCCAGCATTGTGACAACCCGCCCTTCTACCGCTTCACGGCCAGTAGCAAGGCTTCCGCAGCAGCCTCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GTTGTTCTTCAGGCACTCCAGCATGGACTGGATGGCTaGTTCAGTGGACGTGAAGGTGGGCTCGGACCACGC +
Preference number: 6 (lower is better)
Translates to: VVLQALQHGLDG*FSGREGGLGPR
Trigger: GCGTGGTCCGAGCCCACCTTCACGTCCACTGAAGCAGCCATCCAGTCCATGCTGGAGTGCCTGAAGAACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CACAGGCTGCGGGCTCGCCAGGGTAAACTGGTCCAGTaGCCGATTGCCTTTTTCTTCCCCCTCAGTCATGTC +
Preference number: 6 (lower is better)
Translates to: HRLRARQGKLVQ*PIAFFFPLSHV
Trigger: GACATGACTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAGCCCGCAGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS GCA 72 bp AGAGAAGCTTCGTTGATGCCGGCTCCGTTCGGCAGTTaGGGTGTTGCCGCTGGTGGTTCCCGGGTTCATGTT +
Preference number: 6 (lower is better)
Translates to: REASLMPAPFGS*GVAAGGSRVHV
Trigger: AACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GTGGTGGTGAGGGATGTGAATCCTTTCAGCAGCAGCTaGTGCAGCCCGGAGAAGTCGGCCCACTTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: VVVRDVNPFSSS*CSPEKSAHFSC
Trigger: ACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCAGCAGCTGCTGCTGAAAGGATTCACATCCCTCACCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp CAGGAGCCATCTGAGTCACACATAAGCTGGTTGATGTaGCTGCGCCAGGCCTCCTCGGCATCGTCACAGGCT +
Preference number: 6 (lower is better)
Translates to: QEPSESHISWLM*LRQASSASSQA
Trigger: AGCCTGTGACGATGCCGAGGAGGCCTGGCGCAGCCACATCAACCAGCTTATGTGTGACTCAGATGGCTCCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000477712.2
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp GTCACAGGCTGCGGGCTCGCCAGGGTAAACTGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCAGTCATGTCCAGGCTAAAGCTGTCG +
Preference number: 6 (lower is better)
Translates to: VTGCGLARVNWSSAR*PFSSPSVMSRLKLS
Trigger: CGACAGCTTTAGCCTGGACATGACTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAGCCCGCAGCCTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS CAA 90 bp GGATCGGTCGATGACACCAAACTTCTTGGGCACAGAGAAGCTTCGTaGATGCCGGCTCCGTTCGGCAGTTGCGGTGTTGCCGCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: GSVDDTKLLGHREAS*MPAPFGSCGVAAGG
Trigger: ACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCATCGACCGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp TCTTGGGCACAGAGAAGCTTCGTTGATGCCGGCTCCGTTCGGCAGTaGCGGTGTTGCCGCTGGTGGTTCCCGGGTTCATGTTTAGTTGTC +
Preference number: 6 (lower is better)
Translates to: SWAQRSFVDAGSVRQ*RCCRWWFPGSCLVV
Trigger: GACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTGCCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp TTCGTTGATGCCGGCTCCGTTCGGCAGTTGCGGTGTTaGCGCTGGTGGTTCCCGGGTTCATGTTTAGTTGTC +
Preference number: 6 (lower is better)
Translates to: FVDAGSVRQLRC*RWWFPGSCLVV
Trigger: GACAACTAAACATGAACCCGGGAACCACCAGCGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CTGCTGCAGCCCGGAGAAGTCGGCCCACTTCAGCTGTaGCTGGAGTTTCTCAAGCTTTTCTCGGTTCTCAGC +
Preference number: 6 (lower is better)
Translates to: LLQPGEVGPLQL*LEFLKLFSVLS
Trigger: GCTGAGAACCGAGAAAAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp TGCGGGCTCGCCAGGGTAAACTGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCAGTCATGTCCAGGCTA +
Preference number: 6 (lower is better)
Translates to: CGLARVNWSSAR*PFSSPSVMSRL
Trigger: TAGCCTGGACATGACTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAGCCCGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000477712.2
CDS CAA 72 bp CCTGCTCTCGGGCACCGTCCTCAGAAGATACCAAGCTaGTCTGGTGCTCAAGCAGATCCAGATCCCCACACG +
Preference number: 6 (lower is better)
Translates to: PALGHRPQKIPS*SGAQADPDPHT
Trigger: CGTGTGGGGATCTGGATCTGCTTGAGCACCAGACAAGCTTGGTATCTTCTGAGGACGGTGCCCGAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CCCTGTGCGTGCCAGAAGCAGGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGGGAGAAGTATTACTCC +
Preference number: 6 (lower is better)
Translates to: PCACQKQVEPEA*CNRCQREKYYS
Trigger: GGAGTAATACTTCTCCCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542859.6
ENST00000642040.1
CDS TCA 72 bp ATGACACCAAACTTCTTGGGCACAGAGAAGCTTCGTTaGTGCCGGCTCCGTTCGGCAGTTGCGGTGTTGCCG +
Preference number: 6 (lower is better)
Translates to: MTPNFLGTEKLR*CRLRSAVAVLP
Trigger: CGGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CCCTGTGCGTGCCAGAAGCAGGTGGAACCGGAGGCTTaGTGTAACCGTTGCCAACGGGAGAAGCTGGAAATA +
Preference number: 6 (lower is better)
Translates to: PCACQKQVEPEA*CNRCQREKLEI
Trigger: TATTTCCAGCTTCTCCCGTTGGCAACGGTTACATCAAGCCTCCGGTTCCACCTGCTTCTGGCACGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CATCCTCCAGTACAAGGCATCGGTAAGGGCTGCGGCTaGTTGGTCTCTGTAATAGTCAGCAACCAGCCCGTG +
Preference number: 6 (lower is better)
Translates to: HPPVQGIGKGCG*LVSVIVSNQPV
Trigger: CACGGGCTGGTTGCTGACTATTACAGAGACCAAGCAGCCGCAGCCCTTACCGATGCCTTGTACTGGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GCCCAGCATCCTCCAGTACAAGGCATCGGTAAGGGCTaGGGCTGCTTGGTCTCTGTAATAGTCAGCAACCAG +
Preference number: 6 (lower is better)
Translates to: AQHPPVQGIGKG*GCLVSVIVSNQ
Trigger: CTGGTTGCTGACTATTACAGAGACCAAGCAGCCGCAGCCCTTACCGATGCCTTGTACTGGAGGATGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp ATGGCCCTGGGCTTCCCATCACGCCCAGAAGAATTCTaGAGCTCATCATACCGCCTCCCGATGATTGGAGTC +
Preference number: 6 (lower is better)
Translates to: MALGFPSRPEEF*SSSYRLPMIGV
Trigger: GACTCCAATCATCGGGAGGCGGTATGATGAGCTGCAGAATTCTTCTGGGCGTGATGGGAAGCCCAGGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp GATGACACCAAACTTCTTGGGCACAGAGAAGCTTCGTaGATGCCGGCTCCGTTCGGCAGTTGCGGTGTTGCC +
Preference number: 6 (lower is better)
Translates to: DDTKLLGHREAS*MPAPFGSCGVA
Trigger: GGCAACACCGCAACTGCCGAACGGAGCCGGCATCAACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp GCTCTGAGGAGGGAACCCAGACCAGACCCCCATCTCTACAGTTCCTaGACAGAGGCTGTTTACCCGCAGGAAGGTCAGAAAGCATCTAGC +
Preference number: 6 (lower is better)
Translates to: ALRREPRPDPHLYSS*TEAVYPQEGQKASS
Trigger: GCTAGATGCTTTCTGACCTTCCTGCGGGTAAACAGCCTCTGTCAAGGAACTGTAGAGATGGGGGTCTGGTCTGGGTTCCCTCCTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS CAA 90 bp GACTCCATCAAGGCCACTGTGACCCAGAATATGGTGGCCAGCAGGTaGGTGGGATGGTTTATGTGGGATGGGTCCGTGAGACTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: DSIKATVTQNMVASR*VGWFMWDGSVRLSF
Trigger: GAAGGACAGTCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGCTGGCCACCATATTCTGGGTCACAGTGGCCTTGATGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GGGAACCCAGACCAGACCCCCATCTCTACAGTTCCTTaGCAGAGGCTGTTTACCCGCAGGAAGGTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: GNPDQTPISTVP*QRLFTRRKVRK
Trigger: CTTTCTGACCTTCCTGCGGGTAAACAGCCTCTGTCAAGGAACTGTAGAGATGGGGGTCTGGTCTGGGTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 72 bp CAGCCACCGCCGCCGCCCCAGACTCTGATGTTCTCATaGTTTACCCTGCACTTGTTTGGGAAGCTTAACAAG +
Preference number: 6 (lower is better)
Translates to: QPPPPPQTLMFS*FTLHLFGKLNK
Trigger: CTTGTTAAGCTTCCCAAACAAGTGCAGGGTAAAGCATGAGAACATCAGAGTCTGGGGCGGCGGCGGTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647500.1
CDS CCA 72 bp AGCTGTGTCCACATCTTCTACCTCCTGGGTCATCTGTaGGAGGTTTCCACTGCTGCCTCCCAGACTGATGCT +
Preference number: 6 (lower is better)
Translates to: SCVHIFYLLGHL*EVSTAASQTDA
Trigger: AGCATCAGTCTGGGAGGCAGCAGTGGAAACCTCCCACAGATGACCCAGGAGGTAGAAGATGTGGACACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TCTGTTTCAGCAGCTGTGTCCACATCTTCTACCTCCTaGGTCATCTGTGGGAGGTTTCCACTGCTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: SVSAAVSTSSTS*VICGRFPLLPP
Trigger: GGGAGGCAGCAGTGGAAACCTCCCACAGATGACCCAGGAGGTAGAAGATGTGGACACAGCTGCTGAAACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp GTGACCCAGAATATGGTGGCCAGCAGGTTGGTGGGATaGTTTATGTGGGATGGGTCCGTGAGACTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: VTQNMVASRLVG*FMWDGSVRLSF
Trigger: GAAGGACAGTCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGCTGGCCACCATATTCTGGGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TGCAGCCCGGAGAAGTCGGCCCACTTCAGCTGTGCCTaGAGTTTCTCAAGCTTTTCTCGGTTCTCAGCCTTA +
Preference number: 6 (lower is better)
Translates to: CSPEKSAHFSCA*SFSSFSRFSAL
Trigger: TAAGGCTGAGAACCGAGAAAAGCTTGAGAAACTCCAGGCACAGCTGAAGTGGGCCGACTTCTCCGGGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AAGGCCACTGTGACCCAGAATATGGTGGCCAGCAGGTaGGTGGGATGGTTTATGTGGGATGGGTCCGTGAGA +
Preference number: 6 (lower is better)
Translates to: KATVTQNMVASR*VGWFMWDGSVR
Trigger: TCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGCTGGCCACCATATTCTGGGTCACAGTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp CCAAAGCTCGCCAGGGTAAACTGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCAGTCATGTCCAGGCTA +
Preference number: 6 (lower is better)
Translates to: PKLARVNWSSAR*PFSSPSVMSRL
Trigger: TAGCCTGGACATGACTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAGCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp TCACCTTCTCCAAAGCTCGCCAGGGTAAACTGGTCCAGTGCCCGATaGCCTTTTTCTTCCCCCTCAGTCATGTCCAGGCTAAAGCTGTCG +
Preference number: 6 (lower is better)
Translates to: SPSPKLARVNWSSAR*PFSSPSVMSRLKLS
Trigger: CGACAGCTTTAGCCTGGACATGACTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAGCTTTGGAGAAGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GAAGGTCAGATAAGGCATGTGCTGACAGAGGTTGCTTaGGGGCCCGGAATATCTGGAAGGACCGACCAGCAT +
Preference number: 6 (lower is better)
Translates to: EGQIRHVLTEVA*GPGISGRTDQH
Trigger: ATGCTGGTCGGTCCTTCCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAGCACATGCCTTATCTGACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GTGTGGCACTTCGAGGTGGGTCAGAGGATCGGTCGATaGCACCAAACTTCTTGGGCACAGAGAAGCTTCGTT +
Preference number: 6 (lower is better)
Translates to: VWHFEVGQRIGR*HQTSWAQRSFV
Trigger: AACGAAGCTTCTCTGTGCCCAAGAAGTTTGGTGTCATCGACCGATCCTCTGACCCACCTCGAAGTGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CAGCATATGCTTCATGAAGGTATCGACAGACCACATTaGCCCACGTGGCACAGTCCCTCGTGTAGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: QHMLHEGIDRPH*PTWHSPSCSCA
Trigger: CGCACAGCTACACGAGGGACTGTGCCACGTGGGTCAATGTGGTCTGTCGATACCTTCATGAAGCATATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GCTCCTGTAACCGGCATGGGAGGTTCCCCATCTTTCTaGTGCAAGCTATCAGCTATGACCAAGAATGCCCGT +
Preference number: 6 (lower is better)
Translates to: APVTGMGGSPSF*CKLSAMTKNAR
Trigger: ACGGGCATTCTTGGTCATAGCTGATAGCTTGCAGCAGAAAGATGGGGAACCTCCCATGCCGGTTACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GAGAGAAGGTCAGATAAGGCATGTGCTGACAGAGGTTaGTTGAGGGCCCGGAATATCTGGAAGGACCGACCA +
Preference number: 6 (lower is better)
Translates to: ERRSDKACADRG*LRARNIWKDRP
Trigger: TGGTCGGTCCTTCCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAGCACATGCCTTATCTGACCTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp ACCTTCTCCAAAGCTCGCCAGGGTAAACTGGTCCAGTaGCCGATTGCCTTTTTCTTCCCCCTCAGTCATGTC +
Preference number: 6 (lower is better)
Translates to: TFSKARQGKLVQ*PIAFFFPLSHV
Trigger: GACATGACTGAGGGGGAAGAAAAAGGCAATCGGGCACTGGACCAGTTTACCCTGGCGAGCTTTGGAGAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp AGCGTGGGATGCATCCACCATGGATATTTTGGACACTaGTGTCAGCAGACTGAAGAGCTGCAGGGTCAGGTC +
Preference number: 6 (lower is better)
Translates to: SVGCIHHGYFGH*CQQTEELQGQV
Trigger: GACCTGACCCTGCAGCTCTTCAGTCTGCTGACACCAGTGTCCAAAATATCCATGGTGGATGCATCCCACGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TCTCGGGCACCGTCCTCAGAAGATACCAAGCTTGTCTaGTGCTCAAGCAGATCCAGATCCCCACACGATGAA +
Preference number: 6 (lower is better)
Translates to: SRAPSSEDTKLV*CSSRSRSPHDE
Trigger: TTCATCGTGTGGGGATCTGGATCTGCTTGAGCACCAGACAAGCTTGGTATCTTCTGAGGACGGTGCCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp CACAGACTTCTGCACTCCCTGATCTGCCGCAAAGCTTaGCCGAGTTCGTTGTTCTTCAGGCACTCCAGCATG +
Preference number: 6 (lower is better)
Translates to: HRLLHSLICRKA*PSSLFFRHSSM
Trigger: CATGCTGGAGTGCCTGAAGAACAACGAACTCGGCAAAGCTTTGCGGCAGATCAGGGAGTGCAGAAGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AGGGAACCCAGACCAGACCCCCATCTCTACAGTTCCTaGACAGAGGCTGTTTACCCGCAGGAAGGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: REPRPDPHLYSS*TEAVYPQEGQK
Trigger: TTTCTGACCTTCCTGCGGGTAAACAGCCTCTGTCAAGGAACTGTAGAGATGGGGGTCTGGTCTGGGTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS CAA 72 bp GCATCTGGGAAATTTTCCTGGCCAGCAACCACTGTATaGCTGCTAGAGGTGGTTCCTGAGGCTGCTGCGGAA +
Preference number: 6 (lower is better)
Translates to: ASGKFSWPATTV*LLEVVPEAAAE
Trigger: TTCCGCAGCAGCCTCAGGAACCACCTCTAGCAGCAATACAGTGGTTGCTGGCCAGGAAAATTTCCCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AGAAGGTCAGATAAGGCATGTGCTGACAGAGGTTGCTaGAGGGCCCGGAATATCTGGAAGGACCGACCAGCA +
Preference number: 6 (lower is better)
Translates to: RRSDKACADRGC*RARNIWKDRPA
Trigger: TGCTGGTCGGTCCTTCCAGATATTCCGGGCCCTCAAGCAACCTCTGTCAGCACATGCCTTATCTGACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp ACCACGCGCCGTCTGAATAGAGAGGGTCAGCTGCAATaGCTGCACTGGCTTCCTTCAGGTGTTTCTTTAGGT +
Preference number: 6 (lower is better)
Translates to: TTRRLNREGQLQ*LHWLPSGVSLG
Trigger: ACCTAAAGAAACACCTGAAGGAAGCCAGTGCAGTCATTGCAGCTGACCCTCTCTATTCAGACGGCGCGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GGACATATTCTCCTGGTTTACTGTCTGGGTCCACATTaGTGGGTAGCATGGTTGGCGGCCCTTTCTCCCTGT +
Preference number: 6 (lower is better)
Translates to: GHILLVYCLGPH*WVAWLAALSPC
Trigger: ACAGGGAGAAAGGGCCGCCAACCATGCTACCCATCAATGTGGACCCAGACAGTAAACCAGGAGAATATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000436046.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp AAATGTGCCACCTGTTCAGGAACAGCTGCTTCTGACTaGCACAGAGCAAACAGGTCACCAGGGGGTACAAGG +
Preference number: 6 (lower is better)
Translates to: KCATCSGTAASD*HRANRSPGGTR
Trigger: CCTTGTACCCCCTGGTGACCTGTTTGCTCTGTGTCAGTCAGAAGCAGCTGTTCCTGAACAGGTGGCACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CTGGTTTTTGAGGAGAGGCCTTGTTGGGTACAAGCCTaGATTCTGTCCAGTGTGGCACTTCGAGGTGGGTCA +
Preference number: 6 (lower is better)
Translates to: LVFEERPCWVQA*ILSSVALRGGS
Trigger: TGACCCACCTCGAAGTGCCACACTGGACAGAATTCAGGCTTGTACCCAACAAGGCCTCTCCTCAAAAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GCAGGTTGGTGGGATGGTTTATGTGGGATGGGTCCGTaGGACTGTCCTTCAAGGAGGATGAGCTTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: AGWWDGLCGMGP*DCPSRRMSFWF
Trigger: AAACCAGAAGCTCATCCTCCTTGAAGGACAGTCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CAGGATCTGGCTGGCTGTGAGGTCCTCCTCCTCGGATaGTTCATCGGAGTCCTCATGGTGCATTTTATTCAG +
Preference number: 6 (lower is better)
Translates to: QDLAGCEVLLLG*FIGVLMVHFIQ
Trigger: CTGAATAAAATGCACCATGAGGACTCCGATGAATCATCCGAGGAGGAGGACCTCACAGCCAGCCAGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp TGTGTCTGGATGACTAGTTTCCACTGGGTGAGCAGCTaGAGCAGCAACTTCAGGGACGAATCAAGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: CVWMTSFHWVSS*SSNFRDESRSV
Trigger: CACACTCCTTGATTCGTCCCTGAAGTTGCTGCTGCAGCTGCTCACCCAGTGGAAACTAGTCATCCAGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp AACTGCTGCTCGCTGTTTGTGTCATCCATGTTCTCCTaGTCTCGGGCACCGTCCTCAGAAGATACCAAGCTT +
Preference number: 6 (lower is better)
Translates to: NCCSLFVSSMFS*SRAPSSEDTKL
Trigger: AAGCTTGGTATCTTCTGAGGACGGTGCCCGAGAGCAGGAGAACATGGATGACACAAACAGCGAGCAGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GGAGTGCTTCCTGACAGTTGGCGCTCCTCCAGAATCTaGATATCACACTTATCCAGGCTGTCCAGAGAACGT +
Preference number: 6 (lower is better)
Translates to: GVLPDSWRSSRI*ISHLSRLSRER
Trigger: ACGTTCTCTGGACAGCCTGGATAAGTGTGATATGCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCACTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp AAAGCTGGACATTCTGGTGTTAAAGGAATGAGGTTCTaGAGGGGTCGAGTCACAGGCTGTGGTGAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: KAGHSGVKGMRF*RGRVTGCGEQL
Trigger: GAGCTGCTCACCACAGCCTGTGACTCGACCCCTGCAGAACCTCATTCCTTTAACACCAGAATGTCCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp AATATGGTGGCCAGCAGGTTGGTGGGATGGTTTATGTaGGATGGGTCCGTGAGACTGTCCTTCAAGGAGGAT +
Preference number: 6 (lower is better)
Translates to: NMVASRLVGWFM*DGSVRLSFKED
Trigger: ATCCTCCTTGAAGGACAGTCTCACGGACCCATCCCACATAAACCATCCCACCAACCTGCTGGCCACCATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp TGGACCTCATCATCAGAACTGCTTCCAAAGATGTCATaGGGCCACAGACTTCTGCACTCCCTGATCTGCCGC +
Preference number: 6 (lower is better)
Translates to: WTSSSELLPKMS*GHRLLHSLICR
Trigger: GCGGCAGATCAGGGAGTGCAGAAGTCTGTGGCCCAATGACATCTTTGGAAGCAGTTCTGATGATGAGGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380217.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AGGACATATTCTCCTGGTTTACTGTCTGGGTCCACATaGATGGGTAGCATGGTTGGCGGCCCTTTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: RTYSPGLLSGST*MGSMVGGPFSL
Trigger: CAGGGAGAAAGGGCCGCCAACCATGCTACCCATCAATGTGGACCCAGACAGTAAACCAGGAGAATATGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000436046.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp ACTTCATCTCCATACTTGGCCGTCATGTACATGAGGTaGTTCAGGACCAGTGACGTGGCTTCTGGAGAGCCC +
Preference number: 6 (lower is better)
Translates to: TSSPYLAVMYMR*FRTSDVASGEP
Trigger: GGGCTCTCCAGAAGCCACGTCACTGGTCCTGAACAACCTCATGTACATGACGGCCAAGTATGGAGATGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp AAACTTTTGAGGACATATTCTCCTGGTTTACTGTCTGGGTCCACATaGATGGGTAGCATGGTTGGCGGCCCTTTCTCCCTGTGCGTGCCA +
Preference number: 6 (lower is better)
Translates to: KLLRTYSPGLLSGST*MGSMVGGPFSLCVP
Trigger: TGGCACGCACAGGGAGAAAGGGCCGCCAACCATGCTACCCATCAATGTGGACCCAGACAGTAAACCAGGAGAATATGTCCTCAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000436046.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp GCTGCTGGAGTTCTTTCAGAAGGAACTAGAAAACAGGCTGCCTGTTaGCTACAGAGGCCTAGACTCTTAAGGCCTGGTCTCTTAGGACCC +
Preference number: 6 (lower is better)
Translates to: AAGVLSEGTRKQAAC*LQRPRLLRPGLLGP
Trigger: GGGTCCTAAGAGACCAGGCCTTAAGAGTCTAGGCCTCTGTAGCAAACAGGCAGCCTGTTTTCTAGTTCCTTCTGAAAGAACTCCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS CAA 90 bp CCTCTCATGAGAGGAAGTGTTCAAACTCTTGTCTCTGAGGCTCCCTaGACTCTGGCCTTGAGCAAGGCCTGCCTGAGAAGCAGCTATTTA +
Preference number: 6 (lower is better)
Translates to: PLMRGSVQTLVSEAP*TLALSKACLRSSYL
Trigger: TAAATAGCTGCTTCTCAGGCAGGCCTTGCTCAAGGCCAGAGTCAAGGGAGCCTCAGAGACAAGAGTTTGAACACTTCCTCTCATGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS CAA 90 bp TTCAGTGGAAACCCAATAGCGTGGGATGCATCCACCATGGATATTTaGGACACTGGTGTCAGCAGACTGAAGAGCTGCAGGGTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: FSGNPIAWDASTMDI*DTGVSRLKSCRVRS
Trigger: AGACCTGACCCTGCAGCTCTTCAGTCTGCTGACACCAGTGTCCAAAATATCCATGGTGGATGCATCCCACGCTATTGGGTTTCCACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CAGGAACTTCATCTCCATACTTGGCCGTCATGTACATaGGGTTGTTCAGGACCAGTGACGTGGCTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: QELHLHTWPSCT*GCSGPVTWLLE
Trigger: CTCCAGAAGCCACGTCACTGGTCCTGAACAACCTCATGTACATGACGGCCAAGTATGGAGATGAAGTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GAAGCATCAAAGCTGGACATTCTGGTGTTAAAGGAATaGGGTTCTGCAGGGGTCGAGTCACAGGCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: EASKLDILVLKE*GSAGVESQAVV
Trigger: CACCACAGCCTGTGACTCGACCCCTGCAGAACCTCATTCCTTTAACACCAGAATGTCCAGCTTTGATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp AAACCAGAGCAAAACCTTCTACAGCGTGGAGTACACTaGAGTGGGGACCTCGTTCCGACTGAATTCTGTGAC +
Preference number: 6 (lower is better)
Translates to: KPEQNLLQRGVH*SGDLVPTEFCD
Trigger: GTCACAGAATTCAGTCGGAACGAGGTCCCCACTGCAGTGTACTCCACGCTGTAGAAGGTTTTGCTCTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GAAGAGGCAGAGGACCCAGGGGTCTTTGACAGACTGTaGAAATATCCAGACATGGGAAGGGCTTTTCACATC +
Preference number: 6 (lower is better)
Translates to: EEAEDPGVFDRL*KYPDMGRAFHI
Trigger: GATGTGAAAAGCCCTTCCCATGTCTGGATATTTGCACAGTCTGTCAAAGACCCCTGGGTCCTCTGCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp ACGGTTAGAGTCTTAGCTTCACCCATCTCTCGGGTCTaGAGGAGCACGGAAGCAATGGAATGGAAATTGCTG +
Preference number: 6 (lower is better)
Translates to: TVRVLASPISRV*RSTEAMEWKLL
Trigger: CAGCAATTTCCATTCCATTGCTTCCGTGCTCCTGCAGACCCGAGAGATGGGTGAAGCTAAGACTCTAACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TTCACAGTTAGAGATGCAATGAAATTTCCACGTGGCTaGGGAGGCCTCAGAACCATGGCAGGAGGCAAAAGG +
Preference number: 6 (lower is better)
Translates to: FTVRDAMKFPRG*GGLRTMAGGKR
Trigger: CCTTTTGCCTCCTGCCATGGTTCTGAGGCCTCCCCAGCCACGTGGAAATTTCATTGCATCTCTAACTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441659.1
CDS CCA 72 bp TATTTGATACTGATCTCAAAGAAGCCCGAATCCTGCTaGCTGGCCATGTCTGCGGCATACAAAGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: YLILISKKPESC*LAMSAAYKEAG
Trigger: CCCAGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTTTGAGATCAGTATCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463566.1
ENST00000642040.1
CDS CCA 72 bp ACAAGCCTGAATTCTGTCCAGTGTGGCACTTCGAGGTaGGTCAGAGGATCGGTCGATGACACCAAACTTCTT +
Preference number: 6 (lower is better)
Translates to: TSLNSVQCGTSR*VRGSVDDTKLL
Trigger: AAGAAGTTTGGTGTCATCGACCGATCCTCTGACCCACCTCGAAGTGCCACACTGGACAGAATTCAGGCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp AGGTCCTCCTCCTCGGATGATTCATCGGAGTCCTCATaGTGCATTTTATTCAGGCTAGGAGTGCTTCCTGAC +
Preference number: 6 (lower is better)
Translates to: RSSSSDDSSESS*CILFRLGVLPD
Trigger: GTCAGGAAGCACTCCTAGCCTGAATAAAATGCACCATGAGGACTCCGATGAATCATCCGAGGAGGAGGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp GGCTGCCCCAGGGCAATAAACAACGCTCGAATTTCCTaGAGTATTAAAACGGACAGTTTGCGTGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: GCPRAINNARIS*SIKTDSLRVAT
Trigger: GGTGGCCACACGCAAACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTTGTTTATTGCCCTGGGGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp TCCAGGCTAAAGCTGTCGCTGCATTCAAAAGCTGCTGGGAGTTCATaGATGGAACTAGAAAGATCATCCTCATGCACGGTGGTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SRLKLSLHSKAAGSS*MELERSSSCTVVSS
Trigger: GGAGGACACCACCGTGCATGAGGATGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGCGACAGCTTTAGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477712.2
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp TCATCCTCAGGCTGCCCCAGGGCAATAAACAACGCTCGAATTTCCTaGAGTATTAAAACGGACAGTTTGCGTGTGGCCACCTGGAAACTG +
Preference number: 6 (lower is better)
Translates to: SSSGCPRAINNARIS*SIKTDSLRVATWKL
Trigger: CAGTTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTTGTTTATTGCCCTGGGGCAGCCTGAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp TGTCTGGTGCTCAAGCAGATCCAGATCCCCACACGATaGAAAAATCACCTGCGAATCAAGAGTCCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: CLVLKQIQIPTR*KNHLRIKSPLL
Trigger: CAGGAGAGGACTCTTGATTCGCAGGTGATTTTTTCATCGTGTGGGGATCTGGATCTGCTTGAGCACCAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641614.1
CDS GCA 72 bp CTATTGACCAGGACTGCGTTCCATTCCACCAACCACTaGAGATCCACATTGTGGGTGAGTGGTAATGTTGCT +
Preference number: 6 (lower is better)
Translates to: LLTRTAFHSTNH*RSTLWVSGNVA
Trigger: AGCAACATTACCACTCACCCACAATGTGGATCTGCAGTGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp TCCTCCTCCTCGGATGATTCATCGGAGTCCTCATGGTaGATTTTATTCAGGCTAGGAGTGCTTCCTGACAGT +
Preference number: 6 (lower is better)
Translates to: SSSSDDSSESSW*ILFRLGVLPDS
Trigger: ACTGTCAGGAAGCACTCCTAGCCTGAATAAAATGCACCATGAGGACTCCGATGAATCATCCGAGGAGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TGGATCCGATTCCCCGGAGGTTATCTCCAAGGTAACTaGCTGCATCACAGGTTAGGAAGCAGAACCTTTTCT +
Preference number: 6 (lower is better)
Translates to: WIRFPGGYLQGN*LHHRLGSRTFS
Trigger: AGAAAAGGTTCTGCTTCCTAACCTGTGATGCAGCCAGTTACCTTGGAGATAACCTCCGGGGAATCGGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000477712.2
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp CACACTTGTCCTCTGACTAAGCAACAAGGAAGTACCTaGAGCTGCCTGTTTCCTCCAAGCAGATGGTTCCTT +
Preference number: 6 (lower is better)
Translates to: HTCPLTKQQGST*SCLFPPSRWFL
Trigger: AAGGAACCATCTGCTTGGAGGAAACAGGCAGCTCCAGGTACTTCCTTGTTGCTTAGTCAGAGGACAAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS CCA 72 bp GCGTTCCATTCCACCAACCACTGCAGATCCACATTGTaGGTGAGTGGTAATGTTGCTGAATCCGAAACTGCT +
Preference number: 6 (lower is better)
Translates to: AFHSTNHCRSTL*VSGNVAESETA
Trigger: AGCAGTTTCGGATTCAGCAACATTACCACTCACCCACAATGTGGATCTGCAGTGGTTGGTGGAATGGAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp AAGGGTCCTGCCCACTGGCTGAATAAGATGAAAAGGTaGTGCCTCAGACTTTGCTGGGGGAAGAGAAATCTT +
Preference number: 6 (lower is better)
Translates to: KGPAHWLNKMKR*CLRLCWGKRNL
Trigger: AAGATTTCTCTTCCCCCAGCAAAGTCTGAGGCACCACCTTTTCATCTTATTCAGCCAGTGGGCAGGACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp CGCCTCCCGATGATTGGAGTCTCCGAAATATCGAAGTaGAAGTCCAGGGTTTTCCCAGGTAATTCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: RLPMIGVSEISK*KSRVFPGNSLE
Trigger: TTCCAAGGAATTACCTGGGAAAACCCTGGACTTCCACTTCGATATTTCGGAGACTCCAATCATCGGGAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp CACAGTTGCTATGGCTTTGAAGCAGCCAGATGCAAGTaGGTAGGAACCTGTGTAGCATCGGTCAATTGCCCA +
Preference number: 6 (lower is better)
Translates to: HSCYGFEAARCK*VGTCVASVNCP
Trigger: TGGGCAATTGACCGATGCTACACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp AGACATGGGAAGGGCTTTTCACATCATAATGGCTATTaGCCAGGACTGCGTTCCATTCCACCAACCACTGCA +
Preference number: 6 (lower is better)
Translates to: RHGKGFSHHNGY*PGLRSIPPTTA
Trigger: TGCAGTGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAGCCATTATGATGTGAAAAGCCCTTCCCATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp CTCATGGTGCATTTTATTCAGGCTAGGAGTGCTTCCTaGCAGTTGGCGCTCCTCCAGAATCTGCATATCACA +
Preference number: 6 (lower is better)
Translates to: LMVHFIQARSAS*QLALLQNLHIT
Trigger: TGTGATATGCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGCCTGAATAAAATGCACCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp TGTCCTCTGACTAAGCAACAAGGAAGTACCTGGAGCTaGCTGTTTCCTCCAAGCAGATGGTTCCTTGCTTTT +
Preference number: 6 (lower is better)
Translates to: CPLTKQQGSTWS*LFPPSRWFLAF
Trigger: AAAAGCAAGGAACCATCTGCTTGGAGGAAACAGGCAGCTCCAGGTACTTCCTTGTTGCTTAGTCAGAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 72 bp TCAGGAGGCACTCTCTTCATAGCACATGTTTATGGATaGCCTGACCATAAGTTCTGCATGTCTCCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: SGGTLFIAHVYG*PDHKFCMSPEG
Trigger: GCCTTCAGGAGACATGCAGAACTTATGGTCAGGGCATCCATAAACATGTGCTATGAAGAGAGTGCCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS CCA 72 bp AGAGGAGTGAACATAATGCTGAAGGGTCCTGCCCACTaGCTGAATAAGATGAAAAGGTGGTGCCTCAGACTT +
Preference number: 6 (lower is better)
Translates to: RGVNIMLKGPAH*LNKMKRWCLRL
Trigger: AAGTCTGAGGCACCACCTTTTCATCTTATTCAGCCAGTGGGCAGGACCCTTCAGCATTATGTTCACTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp CTTGCGAGGGCTGTCTGCAATGCAACTTCACTCAACTaGTGCTCCAGATGGAAGCCTGATTTGGAATCTTTA +
Preference number: 6 (lower is better)
Translates to: LARAVCNATSLN*CSRWKPDLESL
Trigger: TAAAGATTCCAAATCAGGCTTCCATCTGGAGCACCAGTTGAGTGAAGTTGCATTGCAGACAGCCCTCGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp ACTGCGTTCCATTCCACCAACCACTGCAGATCCACATaGTGGGTGAGTGGTAATGTTGCTGAATCCGAAACT +
Preference number: 6 (lower is better)
Translates to: TAFHSTNHCRST*WVSGNVAESET
Trigger: AGTTTCGGATTCAGCAACATTACCACTCACCCACAATGTGGATCTGCAGTGGTTGGTGGAATGGAACGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp GCTTCCACACACAGTTGCTATGGCTTTGAAGCAGCCAGATGCAAGTaGGTAGGAACCTGTGTAGCATCGGTCAATTGCCCAGTTAAAAAG +
Preference number: 6 (lower is better)
Translates to: ASTHSCYGFEAARCK*VGTCVASVNCPVKK
Trigger: CTTTTTAACTGGGCAATTGACCGATGCTACACAGGTTCCTACCAACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGTGTGTGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp TGGTGGTTCCCGGGTTCATGTTTAGTTGTCCTGTGCTCTTTCTGCTaGCTGTTAGTTTACTGCTGGAGCTTAAATCTGGTGAGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: WWFPGSCLVVLCSFC*LLVYCWSLNLVRKS
Trigger: GCTCTTCCTCACCAGATTTAAGCTCCAGCAGTAAACTAACAGCAAGCAGAAAGAGCACAGGACAACTAAACATGAACCCGGGAACCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp ACCCCACAGAGGCTAATCAGGAACTGCAAGGTGATCCTCAGGTTGTaGCTCCATTTCTCATTGTTGGCTAAAGCATTCCAAGCATTTTCC +
Preference number: 6 (lower is better)
Translates to: TPQRLIRNCKVILRL*LHFSLLAKAFQAFS
Trigger: GGAAAATGCTTGGAATGCTTTAGCCAACAATGAGAAATGGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCTCTGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp CTGACCCCACAGAGGCTAATCAGGAACTGCAAGGTGATCCTCAGGTaGTTGCTCCATTTCTCATTGTTGGCTAAAGCATTCCAAGCATTT +
Preference number: 6 (lower is better)
Translates to: LTPQRLIRNCKVILR*LLHFSLLAKAFQAF
Trigger: AAATGCTTGGAATGCTTTAGCCAACAATGAGAAATGGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCTCTGTGGGGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp TCCATTCCACCAACCACTGCAGATCCACATTGTGGGTaGGTGGTAATGTTGCTGAATCCGAAACTGCTACAT +
Preference number: 6 (lower is better)
Translates to: SIPPTTADPHCG*VVMLLNPKLLH
Trigger: ATGTAGCAGTTTCGGATTCAGCAACATTACCACTCACCCACAATGTGGATCTGCAGTGGTTGGTGGAATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp AAATATTTGATACTGATCTCAAAGAAGCCCGAATCCTaGTGGCTGGCCATGTCTGCGGCATACAAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: KYLILISKKPES*WLAMSAAYKEA
Trigger: AGCCTCTTTGTATGCCGCAGACATGGCCAGCCAGCAGGATTCGGGCTTCTTTGAGATCAGTATCAAATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463566.1
ENST00000542859.6
ENST00000642040.1
CDS GCA 72 bp ATAGCACATGTTTATGGATGCCCTGACCATAAGTTCTaGATGTCTCCTGAAGGCCCCACTGAAACGTCATCA +
Preference number: 6 (lower is better)
Translates to: IAHVYGCPDHKF*MSPEGPTETSS
Trigger: TGATGACGTTTCAGTGGGGCCTTCAGGAGACATGCAGAACTTATGGTCAGGGCATCCATAAACATGTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 72 bp ACTCCAATGACTTCTGCATACAGGTCTGCCACAATATaGATATTGCCAGTGTTGGGACCAAGGTACCCTTCT +
Preference number: 6 (lower is better)
Translates to: TPMTSAYRSATI*ILPVLGPRYPS
Trigger: AGAAGGGTACCTTGGTCCCAACACTGGCAATATGCATATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp AGGGCTTTTCACATCATAATGGCTATTGACCAGGACTaGGTTCCATTCCACCAACCACTGCAGATCCACATT +
Preference number: 6 (lower is better)
Translates to: RAFHIIMAIDQD*VPFHQPLQIHI
Trigger: AATGTGGATCTGCAGTGGTTGGTGGAATGGAACGCAGTCCTGGTCAATAGCCATTATGATGTGAAAAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp TATGTCGAAGGGATAGTTCCTGCTTCCACACACAGTTaGTATGGCTTTGAAGCAGCCAGATGCAAGTTGGTA +
Preference number: 6 (lower is better)
Translates to: YVEGIVPASTHS*YGFEAARCKLV
Trigger: TACCAACTTGCATCTGGCTGCTTCAAAGCCATAGCAACTGTGTGTGGAAGCAGGAACTATCCCTTCGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GCGAGGGCTGTCTGCAATGCAACTTCACTCAACTGGTaGTCCAGATGGAAGCCTGATTTGGAATCTTTAAAT +
Preference number: 6 (lower is better)
Translates to: ARAVCNATSLNW*SRWKPDLESLN
Trigger: ATTTAAAGATTCCAAATCAGGCTTCCATCTGGAGCACCAGTTGAGTGAAGTTGCATTGCAGACAGCCCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp ACACAAGACATTCAGTGGAAACCCAATAGCGTGGGATaGATCCACCATGGATATTTTGGACACTGGTGTCAG +
Preference number: 6 (lower is better)
Translates to: TQDIQWKPNSVG*IHHGYFGHWCQ
Trigger: CTGACACCAGTGTCCAAAATATCCATGGTGGATGCATCCCACGCTATTGGGTTTCCACTGAATGTCTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp TCTAGGAAGTCGAAGTCTCTGAAGACTCTAAACTGCTaGTCGCTGTTTGTGTCATCCATGTTCTCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: SRKSKSLKTLNC*SLFVSSMFSCS
Trigger: AGAGCAGGAGAACATGGATGACACAAACAGCGAGCAGCAGTTTAGAGTCTTCAGAGACTTCGACTTCCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp GTCCAGGCTAAAGCTGTCGCTGCATTCAAAAGCTGCTaGGAGTTCATTGATGGAACTAGAAAGATCATCCTC +
Preference number: 6 (lower is better)
Translates to: VQAKAVAAFKSC*EFIDGTRKIIL
Trigger: GAGGATGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGCGACAGCTTTAGCCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477712.2
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TGGCCTTGTTATCGTAGCTCACTGTACCATCAGGTGTaGTCGCCATTATTTCTGGAGTGGAAGCTCTTAAGT +
Preference number: 6 (lower is better)
Translates to: WPCYRSSLYHQV*SPLFLEWKLLS
Trigger: ACTTAAGAGCTTCCACTCCAGAAATAATGGCGACCACACCTGATGGTACAGTGAGCTACGATAACAAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TGCATTTTATTCAGGCTAGGAGTGCTTCCTGACAGTTaGCGCTCCTCCAGAATCTGCATATCACACTTATCC +
Preference number: 6 (lower is better)
Translates to: CILFRLGVLPDS*RSSRICISHLS
Trigger: GGATAAGTGTGATATGCAGATTCTGGAGGAGCGCCAACTGTCAGGAAGCACTCCTAGCCTGAATAAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000542859.6
ENST00000641614.1
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp CCACAAATGCCATTCGCGTTTCCAGGAACTGGTTACTaGCTAAATCTTCTGCACTGGGGTAGTGTGCAAATG +
Preference number: 6 (lower is better)
Translates to: PQMPFAFPGTGY*LNLLHWGSVQM
Trigger: CATTTGCACACTACCCCAGTGCAGAAGATTTAGCAAGTAACCAGTTCCTGGAAACGCGAATGGCATTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463566.1
CDS CAA 90 bp TATCTTGTTCCACAAATGCCATTCGCGTTTCCAGGAACTGGTTACTaGCTAAATCTTCTGCACTGGGGTAGTGTGCAAATGGTGGATGGT +
Preference number: 6 (lower is better)
Translates to: YLVPQMPFAFPGTGY*LNLLHWGSVQMVDG
Trigger: ACCATCCACCATTTGCACACTACCCCAGTGCAGAAGATTTAGCAAGTAACCAGTTCCTGGAAACGCGAATGGCATTTGTGGAACAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463566.1
CDS CAA 90 bp ATCAGGAACTGCAAGGTGATCCTCAGGTTGTTGCTCCATTTCTCATaGTTGGCTAAAGCATTCCAAGCATTTTCCATTTCTGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: IRNCKVILRLLLHFS*LAKAFQAFSISGPG
Trigger: TCCTGGGCCAGAAATGGAAAATGCTTGGAATGCTTTAGCCAACAATGAGAAATGGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GTCTGCTGCAGCTCAAAGAGAAGCTCTTCCATGGTTTaGATGGTGTTGTTACGGCACAAGTATATTGCCACT +
Preference number: 6 (lower is better)
Translates to: VCCSSKRSSSMV*MVLLRHKYIAT
Trigger: AGTGGCAATATACTTGTGCCGTAACAACACCATTCAAACCATGGAAGAGCTTCTCTTTGAGCTGCAGCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CATGTCCAGGCTAAAGCTGTCGCTGCATTCAAAAGCTaGTGGGAGTTCATTGATGGAACTAGAAAGATCATC +
Preference number: 6 (lower is better)
Translates to: HVQAKAVAAFKS*WEFIDGTRKII
Trigger: GATGATCTTTCTAGTTCCATCAATGAACTCCCAGCAGCTTTTGAATGCAGCGACAGCTTTAGCCTGGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000477712.2
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp AGGGAATTTGGCTTGTGCCAACACTCCAATGACTTCTaGATACAGGTCTGCCACAATATGCATATTGCCAGT +
Preference number: 6 (lower is better)
Translates to: REFGLCQHSNDF*IQVCHNMHIAS
Trigger: ACTGGCAATATGCATATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTGTTGGCACAAGCCAAATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TTTCCAGGAACTGGTTACTTGCTAAATCTTCTGCACTaGGGTAGTGTGCAAATGGTGGATGGTTTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: FPGTGYLLNLLH*GSVQMVDGFQK
Trigger: CTTCTGGAAACCATCCACCATTTGCACACTACCCCAGTGCAGAAGATTTAGCAAGTAACCAGTTCCTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463566.1
CDS CCA 72 bp AATATCTTGTTCTCCTCAGCATCTGGGAAATTTTCCTaGCCAGCAACCACTGTATTGCTGCTAGAGGTGGTT +
Preference number: 6 (lower is better)
Translates to: NILFSSASGKFS*PATTVLLLEVV
Trigger: AACCACCTCTAGCAGCAATACAGTGGTTGCTGGCCAGGAAAATTTCCCAGATGCTGAGGAGAACAAGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp CCAGAGCTATTGCTGTATCTTGACTCGAGGCGAGTGTaGGCTCTGATGACATTACTAAACCTTTCATCAGAT +
Preference number: 6 (lower is better)
Translates to: PELLLYLDSRRV*ALMTLLNLSSD
Trigger: ATCTGATGAAAGGTTTAGTAATGTCATCAGAGCCCACACTCGCCTCGAGTCAAGATACAGCAATAGCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp AGAGGTCACTGTGCTGGTATGAAGGTAAAACAAGGCTaGCTGACCGAGAAACTACCAGCTTCAAGATATTCA +
Preference number: 6 (lower is better)
Translates to: RGHCAGMKVKQG*LTEKLPASRYS
Trigger: TGAATATCTTGAAGCTGGTAGTTTCTCGGTCAGCCAGCCTTGTTTTACCTTCATACCAGCACAGTGACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AACGCTCGAATTTCCTTGAGTATTAAAACGGACAGTTaGCGTGTGGCCACCTGGAAACTGCAGAGTAAAACC +
Preference number: 6 (lower is better)
Translates to: NARISLSIKTDS*RVATWKLQSKT
Trigger: GGTTTTACTCTGCAGTTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp CAGAGGCTAATCAGGAACTGCAAGGTGATCCTCAGGTaGTTGCTCCATTTCTCATTGTTGGCTAAAGCATTC +
Preference number: 6 (lower is better)
Translates to: QRLIRNCKVILR*LLHFSLLAKAF
Trigger: GAATGCTTTAGCCAACAATGAGAAATGGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp CCGGGTTCATGTTTAGTTGTCCTGTGCTCTTTCTGCTaGCTGTTAGTTTACTGCTGGAGCTTAAATCTGGTG +
Preference number: 6 (lower is better)
Translates to: PGSCLVVLCSFC*LLVYCWSLNLV
Trigger: CACCAGATTTAAGCTCCAGCAGTAAACTAACAGCAAGCAGAAAGAGCACAGGACAACTAAACATGAACCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GTAACCATATTCAAGGTAATGTCAGCATATGCTTCATaGAGGTATCGACAGACCACATTGACCCACGTGGCA +
Preference number: 6 (lower is better)
Translates to: VTIFKVMSAYAS*RYRQTTLTHVA
Trigger: TGCCACGTGGGTCAATGTGGTCTGTCGATACCTTCATGAAGCATATGCTGACATTACCTTGAATATGGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp TCTCAGCCTTATCGAGTGGCATATGTGCCAGTAGTCTaGTCAACAGCCTTAAGGCCATTAAGTATTCAAACT +
Preference number: 6 (lower is better)
Translates to: SQPYRVAYVPVV*STALRPLSIQT
Trigger: AGTTTGAATACTTAATGGCCTTAAGGCTGTTGAGCAGACTACTGGCACATATGCCACTCGATAAGGCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CACACTCGATGTATTTCTATTTTTGAGAGGTCACTGTaGTGGTATGAAGGTAAAACAAGGCTGGCTGACCGA +
Preference number: 6 (lower is better)
Translates to: HTRCISIFERSL*WYEGKTRLADR
Trigger: TCGGTCAGCCAGCCTTGTTTTACCTTCATACCAGCACAGTGACCTCTCAAAAATAGAAATACATCGAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp AATAGCAGCAACACAGGTCCTGAAAAGATCTATTTTTaGCTTTCTCTCACCCGTGATCATGTCTTCCGGTTC +
Preference number: 6 (lower is better)
Translates to: NSSNTGPEKIYF*LSLTRDHVFRF
Trigger: GAACCGGAAGACATGATCACGGGTGAGAGAAAGCCAAAAATAGATCTTTTCAGGACCTGTGTTGCTGCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CCA 72 bp TTGATTTTTAGGTGTGATGTCTTCATGGCACCAAAGTaGACCAAATGCCCTGGTCGTGAGAAACTCAATGAG +
Preference number: 6 (lower is better)
Translates to: LIFRCDVFMAPK*TKCPGREKLNE
Trigger: CTCATTGAGTTTCTCACGACCAGGGCATTTGGTCCACTTTGGTGCCATGAAGACATCACACCTAAAAATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp GCATACAGGTCTGCCACAATATGCATATTGCCAGTGTaGGGACCAAGGTACCCTTCTTTGTATTTAAAGTGC +
Preference number: 6 (lower is better)
Translates to: AYRSATICILPV*GPRYPSLYLKC
Trigger: GCACTTTAAATACAAAGAAGGGTACCTTGGTCCCAACACTGGCAATATGCATATTGTGGCAGACCTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp ATGACTTCTGCATACAGGTCTGCCACAATATGCATATaGCCAGTGTTGGGACCAAGGTACCCTTCTTTGTAT +
Preference number: 6 (lower is better)
Translates to: MTSAYRSATICI*PVLGPRYPSLY
Trigger: ATACAAAGAAGGGTACCTTGGTCCCAACACTGGCAATATGCATATTGTGGCAGACCTGTATGCAGAAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AGGCTAATCAGGAACTGCAAGGTGATCCTCAGGTTGTaGCTCCATTTCTCATTGTTGGCTAAAGCATTCCAA +
Preference number: 6 (lower is better)
Translates to: RLIRNCKVILRL*LHFSLLAKAFQ
Trigger: TTGGAATGCTTTAGCCAACAATGAGAAATGGAGCAACAACCTGAGGATCACCTTGCAGTTCCTGATTAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp AACACTCCAATGACTTCTGCATACAGGTCTGCCACAATATGCATATaGCCAGTGTTGGGACCAAGGTACCCTTCTTTGTATTTAAAGTGC +
Preference number: 6 (lower is better)
Translates to: NTPMTSAYRSATICI*PVLGPRYPSLYLKC
Trigger: GCACTTTAAATACAAAGAAGGGTACCTTGGTCCCAACACTGGCAATATGCATATTGTGGCAGACCTGTATGCAGAAGTCATTGGAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp GCAATAAACAACGCTCGAATTTCCTTGAGTATTAAAACGGACAGTTaGCGTGTGGCCACCTGGAAACTGCAGAGTAAAACCAGAGCAAAA +
Preference number: 6 (lower is better)
Translates to: AINNARISLSIKTDS*RVATWKLQSKTRAK
Trigger: TTTTGCTCTGGTTTTACTCTGCAGTTTCCAGGTGGCCACACGCAAACTGTCCGTTTTAATACTCAAGGAAATTCGAGCGTTGTTTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 90 bp TCCGAAATATCGAAGTGGAAGTCCAGGGTTTTCCCAGGTAATTCCTaGGAAGCACTAGTCCACACTCGATGTATTTCTATTTTTGAGAGG +
Preference number: 6 (lower is better)
Translates to: SEISKWKSRVFPGNS*EALVHTRCISIFER
Trigger: CCTCTCAAAAATAGAAATACATCGAGTGTGGACTAGTGCTTCCAAGGAATTACCTGGGAAAACCCTGGACTTCCACTTCGATATTTCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GGCTCTGCCATAATGATACGAATCTTGCGTTCAGCCTaGGTGGTGAAGTTGACAAATAAACTTTTGAGGACA +
Preference number: 6 (lower is better)
Translates to: GSAIMIRILRSA*VVKLTNKLLRT
Trigger: TGTCCTCAAAAGTTTATTTGTCAACTTCACCACTCAGGCTGAACGCAAGATTCGTATCATTATGGCAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000436046.1
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp AGCAATAGCAGCTGGAAGTGTAGCTTATATAATCTCTaGCACAGTTCCAATTGCTTTTCTTCGGAGTCCCCT +
Preference number: 6 (lower is better)
Translates to: SNSSWKCSLYNL*HSSNCFSSESP
Trigger: AGGGGACTCCGAAGAAAAGCAATTGGAACTGTGTCAGAGATTATATAAGCTACACTTCCAGCTGCTATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CAGGTAGGTAACCATATTCAAGGTAATGTCAGCATATaGTTCATGAAGGTATCGACAGACCACATTGACCCA +
Preference number: 6 (lower is better)
Translates to: QVGNHIQGNVSI*FMKVSTDHIDP
Trigger: TGGGTCAATGTGGTCTGTCGATACCTTCATGAAGCATATGCTGACATTACCTTGAATATGGTTACCTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp GGCTTTCTCTCACCCGTGATCATGTCTTCCGGTTCTTaGTTTAACATCTGTACATTAGTCAGCATCATACAC +
Preference number: 6 (lower is better)
Translates to: GFLSPVIMSSGS*FNICTLVSIIH
Trigger: GTGTATGATGCTGACTAATGTACAGATGTTAAACAAAGAACCGGAAGACATGATCACGGGTGAGAGAAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp GAGAATACTTCCCGGTCTTTGCTCAGCGACTTTCTTTaGGTATACAAAAAGCTTTGCTTCAAGGATCTGCAT +
Preference number: 6 (lower is better)
Translates to: ENTSRSLLSDFL*VYKKLCFKDLH
Trigger: ATGCAGATCCTTGAAGCAAAGCTTTTTGTATACTCAAAGAAAGTCGCTGAGCAAAGACCGGGAAGTATTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp AGTCCCTCGTGTAGCTGTGCGTTTTATAAAGAGTCATaGCATGTGCAAGATTTGAAAGTTTGGGGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SPSCSCAFYKES*HVQDLKVWGSS
Trigger: AGAAGAACCCCAAACTTTCAAATCTTGCACATGTCATGACTCTTTATAAAACGCACAGCTACACGAGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp GTGAACTGGAACACACTGAATCAAGTTGGCCACCATTaGACTAAAATGTGCCCGGATATCTTTAAGAATTTC +
Preference number: 6 (lower is better)
Translates to: VNWNTLNQVGHH*TKMCPDIFKNF
Trigger: GAAATTCTTAAAGATATCCGGGCACATTTTAGTGCAATGGTGGCCAACTTGATTCAGTGTGTTCCAGTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp TATGTTCACATGCCTATATGTAGGCTTTCTGAAGTTTaGACCCATATGCTGCTTGTTCTCCTGTTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: YVHMPICRLSEV*THMLLVLLFWL
Trigger: CAGCCAAAACAGGAGAACAAGCAGCATATGGGTCAAAACTTCAGAAAGCCTACATATAGGCATGTGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643293.1
CDS CAA 90 bp TCTATTTTTGGCTTTCTCTCACCCGTGATCATGTCTTCCGGTTCTTaGTTTAACATCTGTACATTAGTCAGCATCATACACCTTCCTACT +
Preference number: 6 (lower is better)
Translates to: SIFGFLSPVIMSSGS*FNICTLVSIIHLPT
Trigger: AGTAGGAAGGTGTATGATGCTGACTAATGTACAGATGTTAAACAAAGAACCGGAAGACATGATCACGGGTGAGAGAAAGCCAAAAATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS TCA 72 bp AGCAATAGCAGCTGGAAGTGTAGCTTATATAATCTCTaGCACAGTTCCAATTGTGCAAGAGATTCCATTTGC +
Preference number: 6 (lower is better)
Translates to: SNSSWKCSLYNL*HSSNCARDSIC
Trigger: GCAAATGGAATCTCTTGCACAATTGGAACTGTGTCAGAGATTATATAAGCTACACTTCCAGCTGCTATTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380217.1
CDS GCA 72 bp TTTCAACTTCTTTGTCATTTTCAGCTTCTAGGAGCATaGGGGTCAAGTCCACATATTCTAAGAACAAAGCTC +
Preference number: 6 (lower is better)
Translates to: FQLLCHFQLLGA*GSSPHILRTKL
Trigger: GAGCTTTGTTCTTAGAATATGTGGACTTGACCCGCATGCTCCTAGAAGCTGAAAATGACAAAGAAGTTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AAATGTGCCCGGATATCTTTAAGAATTTCAACTTCTTaGTCATTTTCAGCTTCTAGGAGCATGCGGGTCAAG +
Preference number: 6 (lower is better)
Translates to: KCARISLRISTS*SFSASRSMRVK
Trigger: CTTGACCCGCATGCTCCTAGAAGCTGAAAATGACAAAGAAGTTGAAATTCTTAAAGATATCCGGGCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS GCA 72 bp CTTTCCAACCAAGAAGAGTTGCAAAAGGGTTCCAATTaGATCTACCACTCACACATTCAAAGAAAAAGTACT +
Preference number: 6 (lower is better)
Translates to: LSNQEELQKGSN*IYHSHIQRKST
Trigger: AGTACTTTTTCTTTGAATGTGTGAGTGGTAGATGCAATTGGAACCCTTTTGCAACTCTTCTTGGTTGGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 72 bp TTAGCAACTTTAGATAACTTTCCAACCAAGAAGAGTTaGAAAAGGGTTCCAATTGCATCTACCACTCACACA +
Preference number: 6 (lower is better)
Translates to: LATLDNFPTKKS*KRVPIASTTHT
Trigger: TGTGTGAGTGGTAGATGCAATTGGAACCCTTTTGCAACTCTTCTTGGTTGGAAAGTTATCTAAAGTTGCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490410.1
CDS GCA 72 bp ACACTGAATCAAGTTGGCCACCATTGCACTAAAATGTaGCCGGATATCTTTAAGAATTTCAACTTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: TLNQVGHHCTKM*PDIFKNFNFFV
Trigger: GACAAAGAAGTTGAAATTCTTAAAGATATCCGGGCACATTTTAGTGCAATGGTGGCCAACTTGATTCAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1
CDS CAA 72 bp AGTATGAAAGAAAATGAGGTTAAGTTGTGTCTTATCTaGTTCCACAAATGCCATTCGCGTTTCCAGGAACTG +
Preference number: 6 (lower is better)
Translates to: SMKENEVKLCLI*FHKCHSRFQEL
Trigger: CAGTTCCTGGAAACGCGAATGGCATTTGTGGAACAAGATAAGACACAACTTAACCTCATTTTCTTTCATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463566.1
CDS CAA 90 bp AAAGACATTAGTATGAAAGAAAATGAGGTTAAGTTGTGTCTTATCTaGTTCCACAAATGCCATTCGCGTTTCCAGGAACTGGTTACTTGC +
Preference number: 6 (lower is better)
Translates to: KDISMKENEVKLCLI*FHKCHSRFQELVTC
Trigger: GCAAGTAACCAGTTCCTGGAAACGCGAATGGCATTTGTGGAACAAGATAAGACACAACTTAACCTCATTTTCTTTCATACTAATGTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463566.1
CDS CAA 72 bp GCTGTTGTTCATCGCTTTTTGATTTATTGCTTGTTCTaGGTCTGTATTCATGTGATTCATCCTCAATGCCAT +
Preference number: 6 (lower is better)
Translates to: AVVHRFLIYCLF*VCIHVIHPQCH
Trigger: ATGGCATTGAGGATGAATCACATGAATACAGACCAAGAACAAGCAATAAATCAAAAAGCGATGAACAACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000542859.6
ENST00000642040.1
ENST00000645780.1
ENST00000647500.1