RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000137218

Ensembl transcript IDs: ENST00000259748.6, ENST00000373018.7, ENST00000422888.5, ENST00000426290.1, ENST00000466420.1

Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATaGCTTCTGCAAAGCAACCCTGAACCCTGGGGAGGGTGGGTTCAG +
Preference number: 1 (lower is better)
Translates to: LGTPASTGKHLVPPP*LLQSNPEPWGGWVQ
Trigger: CTGAACCCACCCTCCCCAGGGTTCAGGGTTGCTTTGCAGAAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR TCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACTCTGCAAAGCAACCCTaGACCCTGGGGAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHSAKQP*TLGRVG
Trigger: ACCCACCCTCCCCAGGGTTCAGGGTTGCTTTGCAGA...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR TCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACCAGAGGACAGGAGTGTaGGGCAGAGGCTGGATCATG +
Preference number: 2 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHQRTGV*GRGWIM
Trigger: CATGATCCAGCCTCTGCCTCACACTCCTGTCCTCTG...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR TCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGTCTGCAAAGCAACCCTaGACCCTGGGGAGGGTGGGT +
Preference number: 2 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRSAKQP*TLGRVG
Trigger: ACCCACCCTCCCCAGGGTTCAGGGTTGCTTTGCAGA...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR TCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAAGGAGACTCGGTGGCTaGTATCTCTGGGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: HGQSADKTNGQNGRALNARRLGG*YLWGLQ
Trigger: CTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCT...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR CCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAAAGCAACCCTGAACCCTaGGGAGGGTGGGTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKSNPEP*GGWVQR
Trigger: CCTCTGAACCCACCCTCCCCAGGGTTCAGGGTTGCT...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR CCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATAGCAACCCTGAACCCTaGGGAGGGTGGGTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNSNPEP*GGWVQR
Trigger: CCTCTGAACCCACCCTCCCCAGGGTTCAGGGTTGCT...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR TCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGCAGAGGACAGGAGTGTaGGGCAGAGGCTGGATCATG +
Preference number: 2 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRQRTGV*GRGWIM
Trigger: CATGATCCAGCCTCTGCCTCACACTCCTGTCCTCTG...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR GCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGCTGGTCCCACCTCCATaGCTTCTGCAAAGCAACCCT +
Preference number: 2 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRLVPPP*LLQSNP
Trigger: AGGGTTGCTTTGCAGAAGGCATGGAGGTGGGACCAG...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR CCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATGACCAGGAGACTCGGTaGCTGATATCTCTGGGGACT +
Preference number: 2 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNDQETR*LISLGT
Trigger: AGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTC...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR CCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGGACCAGGAGACTCGGTaGCTGATATCTCTGGGGACT +
Preference number: 2 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRDQETR*LISLGT
Trigger: AGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTC...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR CCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACGCACAGGGAAGCATCTaGTCCCACCTCCATGCCTTC +
Preference number: 2 (lower is better)
Translates to: KTNGQNGRALNAITGTLHAQGSI*SHLHAF
Trigger: GAAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGC...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR CCA 72 bp TATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTaGTCCCACCTCCATGCCTTCTGCAAAGCAACCCTG +
Preference number: 3 (lower is better)
Translates to: YLWGLQPAQGSI*SHLHAFCKATL
Trigger: CAGGGTTGCTTTGCAGAAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
3UTR-3UTR CAA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATAGGAACCCTTCACAGTaGACGTCTCGGCTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNRNPSQ*TSRLPP
Trigger: AGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCT...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp TCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTTGCCGTGGCTGCGGATaGCGGCCCGGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLGTPASTGKHLVPPPCLCRGCG*RPGCWW
Trigger: CCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCA...AAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTGAGCCGCCGGGGAGCTaGGAATCGTGGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPEPPGS*ESWALS
Trigger: GGAGAGGGCCCACGATTCTCAGCTCCCCGGCGGCTC...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAAGGGCGGCCCGGCGGTaGGCAAGGCCATTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHRERAARR*ARPFQP
Trigger: GGGCTGGAATGGCCTTGCCCACCGCCGGGCCGCCCT...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAAGGCCATCGGGGAGCTaGCCGTGGGAGGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHRERPSGS*PWEGHG
Trigger: CCCATGCCCCTCCCACGGTCAGCTCCCCGATGGCCT...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTCTGCGGGAGGAAGGGTaGCTGACCCTCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPLREEG*LTLRQG
Trigger: CCCCTGCCTGAGGGTCAGGCACCCTTCCTCCCGCAG...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTCCAGCCCGGCTCCTCTaGGCTCAGTCTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPPARLL*AQSPAS
Trigger: GCTGGCTGGAGACTGAGCCCAGAGGAGCCGGGCTGG...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGAGGGCGGCCCGGCGGTaGGCAAGGCCATTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLRAARR*ARPFQP
Trigger: GGGCTGGAATGGCCTTGCCCACCGCCGGGCCGCCCT...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp TCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTGGGCTCGAGGGGTTCTaGGGCCCCTTAGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: SLGTPASTGKHLVPPPCLGLEGF*GPLGRS
Trigger: AGACCGCCCTAAGGGGCCCCAGAACCCCTCGAGCCC...AAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGAGCCGCCGGGGAGCTaGGAATCGTGGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAEPPGS*ESWALS
Trigger: GGAGAGGGCCCACGATTCTCAGCTCCCCGGCGGCTC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTCACGGCGTAGGAGTCTaGGCTTCGGGCAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPHGVGV*ASGRVG
Trigger: ACCCACCCTGCCCGAAGCTCAGACTCCTACGCCGTG...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGAGGGGTGCCGCAGGCTaGTTGTCGAGAGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLRGAAG*LSRAAG
Trigger: CCCGGCGGCTCTCGACAAGCAGCCTGCGGCACCCCT...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp TCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTGGCAGTGGCGGCCCCTaGGGTGGTCATCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: SLGTPASTGKHLVPPPCLGSGGP*GGHLHW
Trigger: CCAGTGAAGATGACCACCGCAGGGGCCGCCACTGCC...AAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTGTGGCACAGGAAAGCTaGCGTGGCTGCGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPVAQES*RGCGWR
Trigger: CCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCAC...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTGGCGGCCCCTGCGGTaGTCATCTTCACTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPWRPLR*SSSLAG
Trigger: ACCGGCCAGTGAAGATGACCACCGCAGGGGCCGCCA...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACCGGCCCGGGTGCTGGTaGGCTTCTGCAGTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHRPGCW*ASAVGS
Trigger: AGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCG...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCATGGCGGCCCGGGTGCTaGTGGGCTTCTGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAWRPGC*WASAVG
Trigger: CCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCA...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAATGCCGTGGCTGCGGATaGCGGCCCGGGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKCRGCG*RPGCWW
Trigger: CCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCA...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACACAGGAAAGCTGCCGTaGCTGCGGATGGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHTGKLP*LRMAAR
Trigger: CCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGT...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTGCGGCGGCGGGTCAGTaGCACAGGAAAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGAAAGQ*HRKAAV
Trigger: CACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGC...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAATCAGAGCAGCCAGCCTaGCCTCACCCAGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHRESEQPA*PHPGHR
Trigger: CCGATGGCCTGGGTGAGGGCAGGCTGGCTGCTCTGA...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTACGGCCTCACGCCGATaGAGGTGCAGCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPTASRR*RCSTSS
Trigger: TGAGCTGGTGCTGCACCTGCATCGGCGTGAGGCCGT...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAGGGGTGCCGCAGGCTaGTTGTCGAGAGCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRRGAAG*LSRAAG
Trigger: CCCGGCGGCTCTCGACAAGCAGCCTGCGGCACCCCT...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCACTGCGGGAGGAAGGGTaGCTGACCCTCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNALREEG*LTLRQG
Trigger: CCCCTGCCTGAGGGTCAGGCACCCTTCCTCCCGCAG...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTTGGCACTTCACCATGTaGCGCCGAGCAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGWHFTM*RRAGVG
Trigger: CCCGACCCCTGCTCGGCGGCACATGGTGAAGTGCCA...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGCGGCGGCGGGTCAGTaGCACAGGAAAGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAAAAGQ*HRKAAV
Trigger: CACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTAGTTAAGCTGCCTTaGGGGCTCGGGCCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLVVKLP*GLGPRP
Trigger: CGGCCGGGGCCCGAGCCCCCAAGGCAGCTTAACTAC...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTCATTGGAAGAGGGTGTaGGCCCATCCCTCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPHWKRV*AHPSSP
Trigger: GGGACTCGAGGGATGGGCTCACACCCTCTTCCAATG...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTCTGCAAAGCAACCCTaGACCCTGGGGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPSAKQP*TLGRVG
Trigger: ACCCACCCTCCCCAGGGTTCAGGGTTGCTTTGCAGA...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp TCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTGGAACCCTTCACAGTTaGCGTCTCGGCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SLGTPASTGKHLVPPPCLGTLHS*RLGSLL
Trigger: GAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCC...AAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGTGCTGGTGGGCTTCTaGAGTGGGGTCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHVLVGF*SGVSSS
Trigger: GGAGGACGAGACCCCACTGCAGAAGCCCACCAGCAC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTAGGTCGGTGCTGTTGTaGCGGGTTTTCCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPRSVLL*RVFLAV
Trigger: CACCGCCAGGAAAACCCGGCACAACAGCACCGACCT...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTAGAGCATTGGGTGGCTaGGGGGCTCGAGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGRALGG*GARGRS
Trigger: TGACCTCCCTCGAGCCCCCCAGCCACCCAATGCTCT...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGACCTGTGGGTCCCGTTaGTCAGGTCCCCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRTCGSR*SGPRAC
Trigger: GCAGGCCCGGGGACCTGACCAACGGGACCCACAGGT...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATACCTGTGGGTCCCGTTaGTCAGGTCCCCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNTCGSR*SGPRAC
Trigger: GCAGGCCCGGGGACCTGACCAACGGGACCCACAGGT...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCTGGGACAGAGGCCCTaGCACTTCACCATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGLGQRP*HFTMCR
Trigger: GCGGCACATGGTGAAGTGCCAGGGCCTCTGTCCCAG...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGCACTTGGGCTGGGCTaGACACTCAGAAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHALGLG*TLRRGL
Trigger: GAGGCCCCTTCTGAGTGTCCAGCCCAGCCCAAGTGC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGGTGGGCTTCTGCAGTaGGGTCTCGTCCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHGGLLQ*GLVLLT
Trigger: GGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGGTGGGCTTCTGCAGTaGGGTCTCGTCCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHREGGLLQ*GLVLLT
Trigger: GGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACC...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGACAGGAAAGCTGCCGTaGCTGCGGATGGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRTGKLP*LRMAAR
Trigger: CCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGT...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTAAAGTTGAAGACCCTTaGGGAGCCGCGGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGKVEDP*GAAAAG
Trigger: ACCCGCCGCCGCGGCTCCCCAAGGGTCTTCAACTTT...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAAGTAGTTAAGCTGCCTTaGGGGCTCGGGCCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKVVKLP*GLGPRP
Trigger: CGGCCGGGGCCCGAGCCCCCAAGGCAGCTTAACTAC...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTTGTGCCGGGTTTTCCTaGCGGTGCCATCGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGCAGFS*RCHRLG
Trigger: CCCGAGACGATGGCACCGCCAGGAAAACCCGGCACA...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGAGGCCATCGGGGAGCTaGCCGTGGGAGGGGCATGGG +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLRPSGS*PWEGHG
Trigger: CCCATGCCCCTCCCACGGTCAGCTCCCCGATGGCCT...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTGGCGGAAATCAAAGTTaGAGACCCTTGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPGGNQS*RPLGSR
Trigger: GCGGCTCCCCAAGGGTCTTCAACTTTGATTTCCGCC...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGCACGGCGTAGGAGTCTaGGCTTCGGGCAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRHGVGV*ASGRVG
Trigger: ACCCACCCTGCCCGAAGCTCAGACTCCTACGCCGTG...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTCAGAGGACAGGAGTGTaGGGCAGAGGCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPQRTGV*GRGWIM
Trigger: CATGATCCAGCCTCTGCCTCACACTCCTGTCCTCTG...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTTCTGCAAAGCAACCCTaGACCCTGGGGAGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGSAKQP*TLGRVG
Trigger: ACCCACCCTCCCCAGGGTTCAGGGTTGCTTTGCAGA...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGGAACCCTTCACAGTTaGCGTCTCGGCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHREGTLHS*RLGSLL
Trigger: GAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCC...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATTCAGAGCAGCCAGCCTaGCCTCACCCAGGCCATCGG +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNSEQPA*PHPGHR
Trigger: CCGATGGCCTGGGTGAGGGCAGGCTGGCTGCTCTGA...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAATCACGCCGATGCAGGTaGAGCACCAGCTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHRESRRCR*STSSLC
Trigger: GCAGAGTGAGCTGGTGCTGCACCTGCATCGGCGTGA...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAACGGCCTCACGCCGATaGAGGTGCAGCACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNATASRR*RCSTSS
Trigger: TGAGCTGGTGCTGCACCTGCATCGGCGTGAGGCCGT...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATGGCAGTGGCGGCCCCTaGGGTGGTCATCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNGSGGP*GGHLHW
Trigger: CCAGTGAAGATGACCACCGCAGGGGCCGCCACTGCC...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATTGGCACTTCACCATGTaGCGCCGAGCAGGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNWHFTM*RRAGVG
Trigger: CCCGACCCCTGCTCGGCGGCACATGGTGAAGTGCCA...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGTGCTGGTGGGCTTCTaGAGTGGGGTCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAVLVGF*SGVSSS
Trigger: GGAGGACGAGACCCCACTGCAGAAGCCCACCAGCAC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAAGTGGCACAGGAAAGCTaGCGTGGCTGCGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKVAQES*RGCGWR
Trigger: CCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCAC...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGGGTTTTCCTGGCGGTaGCATCGTCTCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLGFSWR*HRLGAE
Trigger: CTCTGCCCCGAGACGATGGCACCGCCAGGAAAACCC...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACTGCAGCAGCTCCCCATaGTGTCAGAGCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHCSSSP*CQSSQP
Trigger: AGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCA...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCACTGGGACAGAGGCCCTaGCACTTCACCATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNALGQRP*HFTMCR
Trigger: GCGGCACATGGTGAAGTGCCAGGGCCTCTGTCCCAG...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGCACTTGGGCTGGGCTaGACACTCAGAAGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLALGLG*TLRRGL
Trigger: GAGGCCCCTTCTGAGTGTCCAGCCCAGCCCAAGTGC...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTCTCGTAGGTGCACTTaGGCTGGGCTGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: ISGDSSQHREASGPTSMPSRRCT*AGLDTQ
Trigger: CTGAGTGTCCAGCCCAGCCCAAGTGCACCTACGAGA...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp TCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTTCTCGTAGGTGCACTTaGGCTGGGCTGGACACTCAG +
Preference number: 4 (lower is better)
Translates to: SLGTPASTGKHLVPPPCLSRRCT*AGLDTQ
Trigger: CTGAGTGTCCAGCCCAGCCCAAGTGCACCTACGAGA...AAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATTCCCTGGCCTGTCTaGCATCGGCGGCCACTCTCA +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAIPWPV*HRRPLS
Trigger: TGAGAGTGGCCGCCGATGTCAGACAGGCCAGGGAAT...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAACACTGGCCGGTGTGTTaGCATAGGTGTGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHREHWPVC*HRCGTA
Trigger: AGCAGTCCCACACCTATGTCAACACACCGGCCAGTG...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGGCGGAAATCAAAGTTaGAGACCCTTGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHGGNQS*RPLGSR
Trigger: GCGGCTCCCCAAGGGTCTTCAACTTTGATTTCCGCC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACAGGAGACTCGGTGGCTaGTATCTCTGGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHRRLGG*YLWGLQ
Trigger: CTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCT...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTAGCACCAGCTCACTCTaGGTCAGCTCCATCACCCCA +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGSTSSL*VSSITP
Trigger: TGGGGTGATGGAGCTGACGCAGAGTGAGCTGGTGCT...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTTTCACCTGGCCTGGCTaGAAGAACACCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGFTWPG*KNTCGS
Trigger: GGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAA...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGGGGCAGAGCTCTCTaGAGGTTGGACATGGCCACG +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKRGRAL*RLDMAT
Trigger: CGTGGCCATGTCCAACCTGCAGAGAGCTCTGCCCCG...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGCGGGGCAGAGCTCTCTaGAGGTTGGACATGGCCACG +
Preference number: 4 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRRGRAL*RLDMAT
Trigger: CGTGGCCATGTCCAACCTGCAGAGAGCTCTGCCCCG...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATGGGTTTTCCTGGCGGTaGCATCGTCTCGGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNGFSWR*HRLGAE
Trigger: CTCTGCCCCGAGACGATGGCACCGCCAGGAAAACCC...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTACAGAGGCAGGTCGGTaGTGTTGTGCCGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGTEAGR*CCAGFS
Trigger: GGAAAACCCGGCACAACAGCACCGACCTGCCTCTGT...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTACCGTGGGAGGGGCATaGGGAAGGGTTCCCACTTTA +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGTVGGA*GRVPTL
Trigger: TAAAGTGGGAACCCTTCCCCATGCCCCTCCCACGGT...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACCCAGCCCGGCTCCTCTaGGCTCAGTCTCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHPARLL*AQSPAS
Trigger: GCTGGCTGGAGACTGAGCCCAGAGGAGCCGGGCTGG...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGCCACACAGGGGGCAGTaGGGGCAGGTTCTCATAGTG +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLPHRGQ*GQVLIV
Trigger: CACTATGAGAACCTGCCCCCACTGCCCCCTGTGTGG...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCACCACACAGGGGGCAGTaGGGGCAGGTTCTCATAGTG +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAPHRGQ*GQVLIV
Trigger: CACTATGAGAACCTGCCCCCACTGCCCCCTGTGTGG...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCATCCCCTCCCAGCTGCTaGGCTTGGCTTTCCCACACA +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNASPPSC*AWLSHT
Trigger: TGTGTGGGAAAGCCAAGCCCAGCAGCTGGGAGGGGA...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATAAAGTTGAAGACCCTTaGGGAGCCGCGGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNKVEDP*GAAAAG
Trigger: ACCCGCCGCCGCGGCTCCCCAAGGGTCTTCAACTTT...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGGGGCTCGAGGGGTTCTaGGGCCCCTTAGGGCGGTCT +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLGLEGF*GPLGRS
Trigger: AGACCGCCCTAAGGGGCCCCAGAACCCCTCGAGCCC...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGCACAGGGAAGCATCTaGTCCCACCTCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHAQGSI*SHLHAF
Trigger: GAAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACATTGGAAGAGGGTGTaGGCCCATCCCTCGAGTCCC +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKHWKRV*AHPSSP
Trigger: GGGACTCGAGGGATGGGCTCACACCCTCTTCCAATG...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCACTCTGTTCAGGCAGCTaGAGCAGCTCCCCATGGTGT +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNALCSGS*SSSPWC
Trigger: ACACCATGGGGAGCTGCTGCAGCTGCCTGAACAGAG...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATTCACGCCGATGCAGGTaGAGCACCAGCTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNSRRCR*STSSLC
Trigger: GCAGAGTGAGCTGGTGCTGCACCTGCATCGGCGTGA...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACTCCCCAAGCGAGGGGTaGCGCAGGCTGCTTGTCGAG +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHSPSEG*RRLLVE
Trigger: CTCGACAAGCAGCCTGCGGCACCCCTCGCTTGGGGA...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGTTCACCTGGCCTGGCTaGAAGAACACCTGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLFTWPG*KNTCGS
Trigger: GGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAA...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAATGCAGCAGCTCCCCATaGTGTCAGAGCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKCSSSP*CQSSQP
Trigger: AGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCA...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAATCAAGCTCAGCGGGGTaGCTATTGCGGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHRESSSAG*LLRVMM
Trigger: CATCATCACCCGCAATAGCCACCCCGCTGAGCTTGA...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGTGGCGGCCCCTGCGGTaGTCATCTTCACTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLWRPLR*SSSLAG
Trigger: ACCGGCCAGTGAAGATGACCACCGCAGGGGCCGCCA...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGACCAGGAGACTCGGTaGCTGATATCTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHDQETR*LISLGT
Trigger: AGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGGCAGACAAGACAAATaGACAGAACGGGAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHGRQDK*TEREGA
Trigger: AGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGCCTCTGGGATACACCTaGGGCTCACATCGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLPLGYT*GSHRPA
Trigger: CGCGGGGCGATGTGAGCCCCAGGTGTATCCCAGAGG...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373018.7
CDS-3UTR TCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGATCCTGAAGGAGGTTaGAGATTTCCTCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLDPEGG*RFPQPG
Trigger: CCCGGGCTGAGGAAATCTTCAACCTCCTTCAGGATC...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGATCCTGAAGGAGGTTaGAGATTTCCTCAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNADPEGG*RFPQPG
Trigger: CCCGGGCTGAGGAAATCTTCAACCTCCTTCAGGATC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGCTCATCAGGAGCAATaGGGGCATGGGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAAHQEQ*GHGWTL
Trigger: AAGAGTCCACCCATGCCCTCATTGCTCCTGATGAGC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAGGAGACTCGGTGGCTaGTATCTCTGGGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRRRLGG*YLWGLQ
Trigger: CTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCT...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAAAGCACCAGCTCACTCTaGGTCAGCTCCATCACCCCA +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKSTSSL*VSSITP
Trigger: TGGGGTGATGGAGCTGACGCAGAGTGAGCTGGTGCT...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGCTGGTCCCACCTCCATaGCTTCTGCAAAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLLVPPP*LLQSNP
Trigger: AGGGTTGCTTTGCAGAAGGCATGGAGGTGGGACCAG...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGGTGGGGTGGTTGTCTaGAACGCTGTCTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLGGVVV*NAVSVQ
Trigger: CTGAACAGAGACAGCGTTCCAGACAACCACCCCACC...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCATCAAGCTCAGCGGGGTaGCTATTGCGGGTGATGATG +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNASSSAG*LLRVMM
Trigger: CATCATCACCCGCAATAGCCACCCCGCTGAGCTTGA...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCTGCAAGAACACCTGTaGGTCCCGTTGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNLQEHL*VPLVRS
Trigger: GGACCTGACCAACGGGACCCACAGGTGTTCTTGCAG...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAAAACTTCACCTGGCCTaGCTGCAAGAACACCTGTGG +
Preference number: 4 (lower is better)
Translates to: RPGDSVADISGDSSQHREKLHLA*LQEHLW
Trigger: CCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTT...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACAAACTTCACCTGGCCTaGCTGCAAGAACACCTGTGG +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHKLHLA*LQEHLW
Trigger: CCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTT...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTGAGCTCTCTGCAGGTTaGACATGGCCACGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGELSAG*TWPRSF
Trigger: AAAAGACCGTGGCCATGTCCAACCTGCAGAGAGCTC...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGTGTGCCGGGTTTTCCTaGCGGTGCCATCGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLCAGFS*RCHRLG
Trigger: CCCGAGACGATGGCACCGCCAGGAAAACCCGGCACA...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGGCACAGGGAAGCATCTaGTCCCACCTCCATGCCTTC +
Preference number: 4 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRAQGSI*SHLHAF
Trigger: GAAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGC...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGACCAGGAGACTCGGTaGCTGATATCTCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLDQETR*LISLGT
Trigger: AGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTC...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCACATTTGTCACCTTaGACTTGGTGGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: DSVADISGDSSQHREASGPHLSP*TWWGGC
Trigger: ACAACCACCCCACCAAGTTCAAGGTGACAAATGTGG...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp TCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTCACTGCATCAGATCCTaGAGGAGGTTGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: SLGTPASTGKHLVPPPCLHCIRS*RRLKIS
Trigger: GGAAATCTTCAACCTCCTTCAGGATCTGATGCAGTG...AAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp TCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTTGCTCTTCCATCACATTaGTGCTGTTGCACTGCATCA +
Preference number: 4 (lower is better)
Translates to: SLGTPASTGKHLVPPPCLALPSH*CCCTAS
Trigger: TGATGCAGTGCAACAGCATCAATGTGATGGAAGAGC...AAGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAAGCTCATCAGGAGCAATaGGGGCATGGGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKAHQEQ*GHGWTL
Trigger: AAGAGTCCACCCATGCCCTCATTGCTCCTGATGAGC...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGGTCGGTGCTGTTGTaGCGGGTTTTCCTGGCGGTG +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHRSVLL*RVFLAV
Trigger: CACCGCCAGGAAAACCCGGCACAACAGCACCGACCT...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACTCACCCGGATCCCTCTaGGATACACCTGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHSPGSL*DTPGAH
Trigger: GTGAGCCCCAGGTGTATCCCAGAGGGATCCGGGTGA...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGTCACCCGGATCCCTCTaGGATACACCTGGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLSPGSL*DTPGAH
Trigger: GTGAGCCCCAGGTGTATCCCAGAGGGATCCGGGTGA...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATGGTGGGGTGGTTGTCTaGAACGCTGTCTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNGGVVV*NAVSVQ
Trigger: CTGAACAGAGACAGCGTTCCAGACAACCACCCCACC...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGTTATTATTGTGGTGTaGGGGGTCATGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNAVIIVV*GVMQAG
Trigger: CCCAGCCTGCATGACCCCCCACACCACAATAATAAC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACTCCCCTCCCAGCTGCTaGGCTTGGCTTTCCCACACA +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHSPPSC*AWLSHT
Trigger: TGTGTGGGAAAGCCAAGCCCAGCAGCTGGGAGGGGA...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGAGCAACCCTGAACCCTaGGGAGGGTGGGTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLSNPEP*GGWVQR
Trigger: CCTCTGAACCCACCCTCCCCAGGGTTCAGGGTTGCT...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATGGCAGACAAGACAAATaGACAGAACGGGAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNGRQDK*TEREGA
Trigger: AGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCC...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGCTCTTCCATCACATTaGTGCTGTTGCACTGCATCA +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHALPSH*CCCTAS
Trigger: TGATGCAGTGCAACAGCATCAATGTGATGGAAGAGC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACCACTGGCCGGTGTGTTaGCATAGGTGTGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHHWPVC*HRCGTA
Trigger: AGCAGTCCCACACCTATGTCAACACACCGGCCAGTG...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGTCATGGCAAACAGTCTaGAGAGAAGTCACCCGGATC +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLSWQTV*REVTRI
Trigger: GATCCGGGTGACTTCTCTGCAGACTGTTTGCCATGA...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACACAGAGGCAGGTCGGTaGTGTTGTGCCGGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHTEAGR*CCAGFS
Trigger: GGAAAACCCGGCACAACAGCACCGACCTGCCTCTGT...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGCTTGGTGGGCTGTCATaGCAAACAGTCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLLGGLS*QTVCRE
Trigger: TTCTCTGCAGACTGTTTGCCATGACAGCCCACCAAG...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCACTTGGTGGGCTGTCATaGCAAACAGTCTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNALGGLS*QTVCRE
Trigger: TTCTCTGCAGACTGTTTGCCATGACAGCCCACCAAG...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGTTGAACTTGGTGGGGTaGTTGTCTGGAACGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLLNLVG*LSGTLS
Trigger: AGACAGCGTTCCAGACAACCACCCCACCAAGTTCAA...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAAACACAAACTTCACCTaGCCTGGCTGCAAGAACACC +
Preference number: 4 (lower is better)
Translates to: HGQSADKTNGQNGRALNANTNFT*PGCKNT
Trigger: GGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTT...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACCCGGGAACACTTAAATaGAAATATTCCCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHPGTLK*KYSLAC
Trigger: ACAGGCCAGGGAATATTTGCATTTAAGTGTTCCCGG...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGCTGGTCCCACCTCCATaGCTTCTGCAAAGCAACCCT +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLLVPPP*LLQSNP
Trigger: AGGGTTGCTTTGCAGAAGGCATGGAGGTGGGACCAG...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAATTGAACTTGGTGGGGTaGTTGTCTGGAACGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKLNLVG*LSGTLS
Trigger: AGACAGCGTTCCAGACAACCACCCCACCAAGTTCAA...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACGTTATTATTGTGGTGTaGGGGGTCATGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHVIIVV*GVMQAG
Trigger: CCCAGCCTGCATGACCCCCCACACCACAATAATAAC...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGCCACATTTGTCACCTTaGACTTGGTGGGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLPHLSP*TWWGGC
Trigger: ACAACCACCCCACCAAGTTCAAGGTGACAAATGTGG...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACTCATGGCAAACAGTCTaGAGAGAAGTCACCCGGATC +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHSWQTV*REVTRI
Trigger: GATCCGGGTGACTTCTCTGCAGACTGTTTGCCATGA...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR GCA 90 bp CGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCCGGGAACACTTAAATaGAAATATTCCCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RTVGRQDKWTEREGAKRNPGTLK*KYSLAC
Trigger: ACAGGCCAGGGAATATTTGCATTTAAGTGTTCCCGG...ATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAACACAAACTTCACCTaGCCTGGCTGCAAGAACACC +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHNTNFT*PGCKNT
Trigger: GGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTT...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR TCA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACCACTGCATCAGATCCTaGAGGAGGTTGAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: KTNGQNGRALNAITGTLHHCIRS*RRLKIS
Trigger: GGAAATCTTCAACCTCCTTCAGGATCTGATGCAGTG...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp CTTGGGGAGCCGCGGCGGCGGGTCAGTGGCACAGGAAAGCTGCCGTaGCTGCGGATGGCGGCCCGGGTGCTGGTGGGCTTCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: LGEPRRRVSGTGKLP*LRMAARVLVGFCSG
Trigger: CCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCGGCTCCCCAAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp AGACCCTTGGGGAGCCGCGGCGGCGGGTCAGTGGCACAGGAAAGCTaGCGTGGCTGCGGATGGCGGCCCGGGTGCTGGTGGGCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RPLGSRGGGSVAQES*RGCGWRPGCWWASA
Trigger: TGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCGGCTCCCCAAGGGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp CGCGGCGGCGGGTCAGTGGCACAGGAAAGCTGCCGTGGCTGCGGATaGCGGCCCGGGTGCTGGTGGGCTTCTGCAGTGGGGTCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: RGGGSVAQESCRGCG*RPGCWWASAVGSRP
Trigger: AGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp CGCCGAGCAGGGGTCGGGCCCAACACAAACTTCACCTGGCCTGGCTaGAAGAACACCTGTGGGTCCCGTTGGTCAGGTCCCCGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RRAGVGPNTNFTWPG*KNTCGSRWSGPRAC
Trigger: GCAGGCCCGGGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCGACCCCTGCTCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp GTGCCGCCGAGCAGGGGTCGGGCCCAACACAAACTTCACCTGGCCTaGCTGCAAGAACACCTGTGGGTCCCGTTGGTCAGGTCCCCGGGC +
Preference number: 5 (lower is better)
Translates to: VPPSRGRAQHKLHLA*LQEHLWVPLVRSPG
Trigger: GCCCGGGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCGACCCCTGCTCGGCGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp GCCGTGGCTGCGGATGGCGGCCCGGGTGCTGGTGGGCTTCTGCAGTaGGGTCTCGTCCTCCTCACCATCAGGGAAGCCATTGGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: AVAADGGPGAGGLLQ*GLVLLTIREAIGRG
Trigger: CCCTCTTCCAATGGCTTCCCTGATGGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp GCACAGGAAAGCTGCCGTGGCTGCGGATGGCGGCCCGGGTGCTGGTaGGCTTCTGCAGTGGGGTCTCGTCCTCCTCACCATCAGGGAAGC +
Preference number: 5 (lower is better)
Translates to: AQESCRGCGWRPGCW*ASAVGSRPPHHQGS
Trigger: GCTTCCCTGATGGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp GTGGCACAGGAAAGCTGCCGTGGCTGCGGATGGCGGCCCGGGTGCTaGTGGGCTTCTGCAGTGGGGTCTCGTCCTCCTCACCATCAGGGA +
Preference number: 5 (lower is better)
Translates to: VAQESCRGCGWRPGC*WASAVGSRPPHHQG
Trigger: TCCCTGATGGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp CAGCGGACGGCCTCACGCCGATGCAGGTGCAGCACCAGCTCACTCTaGGTCAGCTCCATCACCCCAGAGCCCAGCTCCACCCCCTCATCA +
Preference number: 5 (lower is better)
Translates to: QRTASRRCRCSTSSL*VSSITPEPSSTPSS
Trigger: TGATGAGGGGGTGGAGCTGGGCTCTGGGGTGATGGAGCTGACGCAGAGTGAGCTGGTGCTGCACCTGCATCGGCGTGAGGCCGTCCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000426290.1
CDS GCA 90 bp TCAGTGGCACAGGAAAGCTGCCGTGGCTGCGGATGGCGGCCCGGGTaGTGGTGGGCTTCTGCAGTGGGGTCTCGTCCTCCTCACCATCAG +
Preference number: 5 (lower is better)
Translates to: SVAQESCRGCGWRPG*WWASAVGSRPPHHQ
Trigger: CTGATGGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp CGGGCCCAACACAAACTTCACCTGGCCTGGCTGCAAGAACACCTGTaGGTCCCGTTGGTCAGGTCCCCGGGCCTGCGGGAGGAAGGGTGC +
Preference number: 5 (lower is better)
Translates to: RAQHKLHLAWLQEHL*VPLVRSPGLREEGC
Trigger: GCACCCTTCCTCCCGCAGGCCCGGGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp GAAATCAAAGTTGAAGACCCTTGGGGAGCCGCGGCGGCGGGTCAGTaGCACAGGAAAGCTGCCGTGGCTGCGGATGGCGGCCCGGGTGCT +
Preference number: 5 (lower is better)
Translates to: EIKVEDPWGAAAAGQ*HRKAAVAADGGPGA
Trigger: AGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCGGCTCCCCAAGGGTCTTCAACTTTGATTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp AAGCTGCCGTGGCTGCGGATGGCGGCCCGGGTGCTGGTGGGCTTCTaGAGTGGGGTCTCGTCCTCCTCACCATCAGGGAAGCCATTGGAA +
Preference number: 5 (lower is better)
Translates to: KLPWLRMAARVLVGF*SGVSSSSPSGKPLE
Trigger: TTCCAATGGCTTCCCTGATGGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp GCAGAGGGTGGTGAGGACCGGGAAGTCCCTACAGAGGCAGGTCGGTaGTGTTGTGCCGGGTTTTCCTGGCGGTGCCATCGTCTCGGGGCA +
Preference number: 5 (lower is better)
Translates to: AEGGEDREVPTEAGR*CCAGFSWRCHRLGA
Trigger: TGCCCCGAGACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTGCCTCTGTAGGGACTTCCCGGTCCTCACCACCCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp ACCATGTGCCGCCGAGCAGGGGTCGGGCCCAACACAAACTTCACCTaGCCTGGCTGCAAGAACACCTGTGGGTCCCGTTGGTCAGGTCCC +
Preference number: 5 (lower is better)
Translates to: TMCRRAGVGPNTNFT*PGCKNTCGSRWSGP
Trigger: GGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCGACCCCTGCTCGGCGGCACATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGGTGCCGCAGGCTGCTaGTCGAGAGCCGCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: HGQSADKTNGQNGRALNAGAAGC*SRAAGE
Trigger: CTCCCCGGCGGCTCTCGACAAGCAGCCTGCGGCACC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACCACCTGTGGGTCCCGTaGGTCAGGTCCCCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHHLWVP*VRSPGL
Trigger: CAGGCCCGGGGACCTGACCAACGGGACCCACAGGTG...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp CCTACAGAGGCAGGTCGGTGCTGTTGTGCCGGGTTTTCCTGGCGGTaGCATCGTCTCGGGGCAGAGCTCTCTGCAGGTTGGACATGGCCA +
Preference number: 5 (lower is better)
Translates to: PTEAGRCCCAGFSWR*HRLGAELSAGWTWP
Trigger: TGGCCATGTCCAACCTGCAGAGAGCTCTGCCCCGAGACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTGCCTCTGTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp CACACACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAAGGTGCCGCAGGCTGCTaGTCGAGAGCCGCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: HTRTVGRQDKWTEREGAKGAAGC*SRAAGE
Trigger: CTCCCCGGCGGCTCTCGACAAGCAGCCTGCGGCACC...TTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp ACTTGGTGGGGTGGTTGTCTGGAACGCTGTCTCTGTTCAGGCAGCTaGAGCAGCTCCCCATGGTGTCAGAGCAGCCAGCCTGCCCTCACC +
Preference number: 5 (lower is better)
Translates to: TWWGGCLERCLCSGS*SSSPWCQSSQPALT
Trigger: GGTGAGGGCAGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACCCCACCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000422888.5
CDS GCA 90 bp ACTTGGTGGGGTGGTTGTCTGGAACGCTGTCTCTGTTCAGGCAGCTaGAGCAGCTCCCCATGGTGTCAGAGCAGCCAGCCTGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: TWWGGCLERCLCSGS*SSSPWCQSSQPALG
Trigger: TCCCAGGGCAGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACCCCACCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426290.1
CDS CCA 90 bp GAAGTCCCTACAGAGGCAGGTCGGTGCTGTTGTGCCGGGTTTTCCTaGCGGTGCCATCGTCTCGGGGCAGAGCTCTCTGCAGGTTGGACA +
Preference number: 5 (lower is better)
Translates to: EVPTEAGRCCCAGFS*RCHRLGAELSAGWT
Trigger: TGTCCAACCTGCAGAGAGCTCTGCCCCGAGACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTGCCTCTGTAGGGACTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp TGTCTGGAACGCTGTCTCTGTTCAGGCAGCTGCAGCAGCTCCCCATaGTGTCAGAGCAGCCAGCCTGCCCTGGGAACTGCGGAGAGACAG +
Preference number: 5 (lower is better)
Translates to: CLERCLCSGSCSSSP*CQSSQPALGTAERQ
Trigger: CTGTCTCTCCGCAGTTCCCAGGGCAGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426290.1
CDS-3UTR CAA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGCACCTGTGGGTCCCGTaGGTCAGGTCCCCGGGCCTG +
Preference number: 5 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRHLWVP*VRSPGL
Trigger: CAGGCCCGGGGACCTGACCAACGGGACCCACAGGTG...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp CAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGGTCACGGCAGGTCGGTGCTGTaGTGCCGGGTTTTCCTGGCG +
Preference number: 5 (lower is better)
Translates to: QSQEPFTVDVSAPSSPGHGRSVL*CRVFLA
Trigger: CGCCAGGAAAACCCGGCACAACAGCACCGACCTGCC...GTGACCAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGGCAGGTCGGTGCTGTaGTGCCGGGTTTTCCTGGCG +
Preference number: 5 (lower is better)
Translates to: RPGDSVADISGDSSQHREGRSVL*CRVFLA
Trigger: CGCCAGGAAAACCCGGCACAACAGCACCGACCTGCC...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 90 bp ACTTGGTGGGGTGGTTGTCTGGAACGCTGTCTCTGTTCAGGCAGCTaGAGCAGCTCCCCATGGTGTCAGAGCAGCCAGCCTGCCCTCATC +
Preference number: 5 (lower is better)
Translates to: TWWGGCLERCLCSGS*SSSPWCQSSQPALI
Trigger: GATGAGGGCAGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACCCCACCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466420.1
CDS-3UTR CAA 90 bp ATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTCCCACCTCCATGCCTCGGCGGAAATCAAAGTaGAAGACCCTTGGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ISGDSSQHREASGPTSMPRRKSK*KTLGEP
Trigger: CGGCTCCCCAAGGGTCTTCAACTTTGATTTCCGCCG...AGGCATGGAGGTGGGACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 90 bp TGTCTGGAACGCTGTCTCTGTTCAGGCAGCTGCAGCAGCTCCCCATaGTGTCAGAGCAGCCAGCCTGCCCTCATCCATTCCACTTCATCC +
Preference number: 5 (lower is better)
Translates to: CLERCLCSGSCSSSP*CQSSQPALIHSTSS
Trigger: GGATGAAGTGGAATGGATGAGGGCAGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466420.1
CDS-3UTR CAA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCATCAGCGGGGTGGCTATaGCGGGTGATGATGACAGGC +
Preference number: 5 (lower is better)
Translates to: HGQSADKTNGQNGRALNASAGWL*RVMMTG
Trigger: GCCTGTCATCATCACCCGCAATAGCCACCCCGCTGA...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGCGGCGGAAATCAAAGTaGAAGACCCTTGGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLRRKSK*KTLGEP
Trigger: CGGCTCCCCAAGGGTCTTCAACTTTGATTTCCGCCG...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAAGAGCTCTCTGCAGGTaGGACATGGCCACGGTCTTT +
Preference number: 5 (lower is better)
Translates to: RPGDSVADISGDSSQHRERALCR*DMATVF
Trigger: AAAGACCGTGGCCATGTCCAACCTGCAGAGAGCTCT...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AAACGCAATCACAGGAACCCTTCACAGTTGACGTCTCGGCTCCCTCCTCGCCTGAGAGCTCTCTGCAGGTaGGACATGGCCACGGTCTTT +
Preference number: 5 (lower is better)
Translates to: KRNHRNPSQLTSRLPPRLRALCR*DMATVF
Trigger: AAAGACCGTGGCCATGTCCAACCTGCAGAGAGCTCT...CAGGCGAGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCTGTGATTGCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAGGAACCCTTCACAGTaGACGTCTCGGCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRRNPSQ*TSRLPP
Trigger: AGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCT...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACTTGGTGGGGTGGTaGTCTGGAACGCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRNLVGW*SGTLSL
Trigger: CAGAGACAGCGTTCCAGACAACCACCCCACCAAGTT...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAATTTGTCACCTTGAACTaGGTGGGGTGGTTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: RPGDSVADISGDSSQHREFVTLN*VGWLSG
Trigger: TCCAGACAACCACCCCACCAAGTTCAAGGTGACAAA...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp GACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAAGCATCTGGTTTTGTCACCTTGAACTaGGTGGGGTGGTTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: DSVADISGDSSQHREASGFVTLN*VGWLSG
Trigger: TCCAGACAACCACCCCACCAAGTTCAAGGTGACAAA...ACCAGATGCTTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AGACCAGGAGACTCGGTGGCTGATATCTCTGGGGACTCCAGCCAGCACAGGGAATCCACATTTGTCACCTaGAACTTGGTGGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: RPGDSVADISGDSSQHRESTFVT*NLVGWL
Trigger: CAACCACCCCACCAAGTTCAAGGTGACAAATGTGGA...TTCCCTGTGCTGGCTGGAGTCCCCAGAGATATCAGCCACCGAGTCTCCTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACTCAGCGGGGTGGCTATaGCGGGTGATGATGACAGGC +
Preference number: 5 (lower is better)
Translates to: KTNGQNGRALNAITGTLHSAGWL*RVMMTG
Trigger: GCCTGTCATCATCACCCGCAATAGCCACCCCGCTGA...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAGGCTCTTCCATCACATaGATGCTGTTGCACTGCATC +
Preference number: 5 (lower is better)
Translates to: HGQSADKTNGQNGRALNAGSSIT*MLLHCI
Trigger: GATGCAGTGCAACAGCATCAATGTGATGGAAGAGCC...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGAGGAACCCTTCACAGTaGACGTCTCGGCTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLRNPSQ*TSRLPP
Trigger: AGGAGGGAGCCGAGACGTCAACTGTGAAGGGTTCCT...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAACTTGGTGGGGTGGTaGTCTGGAACGCTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: KTNGQNGRALNAITGTLHNLVGW*SGTLSL
Trigger: CAGAGACAGCGTTCCAGACAACCACCCCACCAAGTT...GTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp GTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGGGCTCTTCCATCACATaGATGCTGTTGCACTGCATC +
Preference number: 5 (lower is better)
Translates to: VGRQDKWTEREGAKRNHRGSSIT*MLLHCI
Trigger: GATGCAGTGCAACAGCATCAATGTGATGGAAGAGCC...CCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp CACGGACAGTCGGCAGACAAGACAAATGGACAGAACGGGAGGGCGCTAAACGCATCAGAAGGGGCCTCATaGTTATTATTGTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: HGQSADKTNGQNGRALNASEGAS*LLLWCG
Trigger: CCCACACCACAATAATAACAATGAGGCCCCTTCTGA...TGCGTTTAGCGCCCTCCCGTTCTGTCCATTTGTCTTGTCTGCCGACTGTCCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS-3UTR CAA 90 bp AAATGGACAGAACGGGAGGGCGCTAAACGCAATCACAGGAACCCTTCACAGTTGTCAGAAGGGGCCTCATaGTTATTATTGTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: KWTEREGAKRNHRNPSQLSEGAS*LLLWCG
Trigger: CCCACACCACAATAATAACAATGAGGCCCCTTCTGA...CAACTGTGAAGGGTTCCTGTGATTGCGTTTAGCGCCCTCCCGTTCTGTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS TCA 90 bp ACAGGCTCTTCCATCACATTGATGCTGTTGCACTGCATCAGATCCTaGAGGAGGTTGAAGATTTCCTCAGCCCGGGAACACTTAAATGCA +
Preference number: 5 (lower is better)
Translates to: TGSSITLMLLHCIRS*RRLKISSAREHLNA
Trigger: TGCATTTAAGTGTTCCCGGGCTGAGGAAATCTTCAACCTCCTTCAGGATCTGATGCAGTGCAACAGCATCAATGTGATGGAAGAGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000426290.1
CDS GCA 90 bp TCATCCAAGTTCTCTCTTCTCCCTTACTACCATCCCAACATCCAGTaGAAATTTATCTTTCTGATGTCCTCTTCAAATGAGTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: SSKFSLLPYYHPNIQ*KFIFLMSSSNELLH
Trigger: ATGTAACAACTCATTTGAAGAGGACATCAGAAAGATAAATTTGCACTGGATGTTGGGATGGTAGTAAGGGAGAAGAGAGAACTTGGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466420.1
CDS GCA 72 bp GGGAGCCGCGGCGGCGGGTCAGTGGCACAGGAAAGCTaGCGTGGCTGCGGATGGCGGCCCGGGTGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: GSRGGGSVAQES*RGCGWRPGCWW
Trigger: CCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCGGCTCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp CCGCGGCGGCGGGTCAGTGGCACAGGAAAGCTGCCGTaGCTGCGGATGGCGGCCCGGGTGCTGGTGGGCTTC +
Preference number: 6 (lower is better)
Translates to: PRRRVSGTGKLP*LRMAARVLVGF
Trigger: GAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp GGGTCAGTGGCACAGGAAAGCTGCCGTGGCTGCGGATaGCGGCCCGGGTGCTGGTGGGCTTCTGCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: GSVAQESCRGCG*RPGCWWASAVG
Trigger: CCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp GTTGAAGACCCTTGGGGAGCCGCGGCGGCGGGTCAGTaGCACAGGAAAGCTGCCGTGGCTGCGGATGGCGGC +
Preference number: 6 (lower is better)
Translates to: VEDPWGAAAAGQ*HRKAAVAADGG
Trigger: GCCGCCATCCGCAGCCACGGCAGCTTTCCTGTGCCACTGACCCGCCGCCGCGGCTCCCCAAGGGTCTTCAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp ACCTGGCCTGGCTGCAAGAACACCTGTGGGTCCCGTTaGTCAGGTCCCCGGGCCTGCGGGAGGAAGGGTGCC +
Preference number: 6 (lower is better)
Translates to: TWPGCKNTCGSR*SGPRACGRKGA
Trigger: GGCACCCTTCCTCCCGCAGGCCCGGGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp AGCTGCCGTGGCTGCGGATGGCGGCCCGGGTGCTGGTaGGCTTCTGCAGTGGGGTCTCGTCCTCCTCACCAT +
Preference number: 6 (lower is better)
Translates to: SCRGCGWRPGCW*ASAVGSRPPHH
Trigger: ATGGTGAGGAGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp GAAAGCTGCCGTGGCTGCGGATGGCGGCCCGGGTGCTaGTGGGCTTCTGCAGTGGGGTCTCGTCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: ESCRGCGWRPGC*WASAVGSRPPH
Trigger: GTGAGGAGGACGAGACCCCACTGCAGAAGCCCACCAGCACCCGGGCCGCCATCCGCAGCCACGGCAGCTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CAA 72 bp CACCTGGCCTGGCTGCAAGAACACCTGTGGGTCCCGTaGGTCAGGTCCCCGGGCCTGCGGGAGGAAGGGTGC +
Preference number: 6 (lower is better)
Translates to: HLAWLQEHLWVP*VRSPGLREEGC
Trigger: GCACCCTTCCTCCCGCAGGCCCGGGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS TCA 72 bp GTGCCGCAGGCTGCTTGTCGAGAGCCGCCGGGGAGCTaGGAATCGTGGGCCCTCTCCAGGGCAGCCATTGGA +
Preference number: 6 (lower is better)
Translates to: VPQAACREPPGS*ESWALSRAAIG
Trigger: TCCAATGGCTGCCCTGGAGAGGGCCCACGATTCTCAGCTCCCCGGCGGCTCTCGACAAGCAGCCTGCGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 72 bp GCCTCACGCCGATGCAGGTGCAGCACCAGCTCACTCTaGGTCAGCTCCATCACCCCAGAGCCCAGCTCCACC +
Preference number: 6 (lower is better)
Translates to: ASRRCRCSTSSL*VSSITPEPSST
Trigger: GGTGGAGCTGGGCTCTGGGGTGATGGAGCTGACGCAGAGTGAGCTGGTGCTGCACCTGCATCGGCGTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000426290.1
CDS CAA 90 bp CACAAACTTCACCTGGCCTGGCTGCAAGAACACCTGTGGGTCCCGTaGGTCAGGTCCCCGGGCCTGCGGGAGGAAGGGTGCCTGACCCTC +
Preference number: 6 (lower is better)
Translates to: HKLHLAWLQEHLWVP*VRSPGLREEGCLTL
Trigger: GAGGGTCAGGCACCCTTCCTCCCGCAGGCCCGGGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 72 bp GCAGGTCGGTGCTGTTGTGCCGGGTTTTCCTGGCGGTaGCATCGTCTCGGGGCAGAGCTCTCTGCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: AGRCCCAGFSWR*HRLGAELSAGW
Trigger: CCAACCTGCAGAGAGCTCTGCCCCGAGACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp CACAAACTTCACCTGGCCTGGCTGCAAGAACACCTGTaGGTCCCGTTGGTCAGGTCCCCGGGCCTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: HKLHLAWLQEHL*VPLVRSPGLRE
Trigger: CTCCCGCAGGCCCGGGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp CGCCGAGCAGGGGTCGGGCCCAACACAAACTTCACCTaGCCTGGCTGCAAGAACACCTGTGGGTCCCGTTGG +
Preference number: 6 (lower is better)
Translates to: RRAGVGPNTNFT*PGCKNTCGSRW
Trigger: CCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCGACCCCTGCTCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp GGCAAACAGTCTGCAGAGAAGTCACCCGGATCCCTCTaGGATACACCTGGGGCTCACATCGCCCCGCGGCCC +
Preference number: 6 (lower is better)
Translates to: GKQSAEKSPGSL*DTPGAHIAPRP
Trigger: GGGCCGCGGGGCGATGTGAGCCCCAGGTGTATCCCAGAGGGATCCGGGTGACTTCTCTGCAGACTGTTTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373018.7
CDS CAA 72 bp GGACCGGGAAGTCCCTACAGAGGCAGGTCGGTGCTGTaGTGCCGGGTTTTCCTGGCGGTGCCATCGTCTCGG +
Preference number: 6 (lower is better)
Translates to: GPGSPYRGRSVL*CRVFLAVPSSR
Trigger: CCGAGACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTGCCTCTGTAGGGACTTCCCGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 72 bp GGGGTCGGGCCCAACACAAACTTCACCTGGCCTGGCTaGAAGAACACCTGTGGGTCCCGTTGGTCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GVGPNTNFTWPG*KNTCGSRWSGP
Trigger: GGGACCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 72 bp GGTGAGGACCGGGAAGTCCCTACAGAGGCAGGTCGGTaGTGTTGTGCCGGGTTTTCCTGGCGGTGCCATCGT +
Preference number: 6 (lower is better)
Translates to: GEDREVPTEAGR*CCAGFSWRCHR
Trigger: ACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTGCCTCTGTAGGGACTTCCCGGTCCTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp ACAGAGGCAGGTCGGTGCTGTTGTGCCGGGTTTTCCTaGCGGTGCCATCGTCTCGGGGCAGAGCTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: TEAGRCCCAGFS*RCHRLGAELSA
Trigger: TGCAGAGAGCTCTGCCCCGAGACGATGGCACCGCCAGGAAAACCCGGCACAACAGCACCGACCTGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp GGCAAACAGTCTGCAGAGAAGTCACCCGGATCCCTCTaGGATACACCTGGGGCTCACCGCGCATCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: GKQSAEKSPGSL*DTPGAHRASLA
Trigger: GGCCAGGGATGCGCGGTGAGCCCCAGGTGTATCCCAGAGGGATCCGGGTGACTTCTCTGCAGACTGTTTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422888.5
CDS TCA 72 bp CACGGTCTTTTTGAGGTCAATCACGGCGTAGGAGTCTaGGCTTCGGGCAGGGTGGGTGGTGGGCATGGGGGC +
Preference number: 6 (lower is better)
Translates to: HGLFEVNHGVGV*ASGRVGGGHGG
Trigger: GCCCCCATGCCCACCACCCACCCTGCCCGAAGCTCAGACTCCTACGCCGTGATTGACCTCAAAAAGACCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp AGCAGGGGTCGGGCCCAACACAAACTTCACCTGGCCTaGCTGCAAGAACACCTGTGGGTCCCGTTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: SRGRAQHKLHLA*LQEHLWVPLVR
Trigger: CCTGACCAACGGGACCCACAGGTGTTCTTGCAGCCAGGCCAGGTGAAGTTTGTGTTGGGCCCGACCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 72 bp GGTGGTTGTCTGGAACGCTGTCTCTGTTCAGGCAGCTaGAGCAGCTCCCCATGGTGTCAGAGCAGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: GGCLERCLCSGS*SSSPWCQSSQP
Trigger: AGGCTGGCTGCTCTGACACCATGGGGAGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000422888.5
ENST00000426290.1
ENST00000466420.1
CDS CAA 72 bp AGTGGGGTCTCGTCCTCCTCACCATCAGGGAAGCCATaGGAAGAGGGTGTGAGCCCATCCCTCGAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: SGVSSSSPSGKP*EEGVSPSLESP
Trigger: TGGGGACTCGAGGGATGGGCTCACACCCTCTTCCAATGGCTTCCCTGATGGTGAGGAGGACGAGACCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS GCA 72 bp TTCCTGGCGGTGCCATCGTCTCGGGGCAGAGCTCTCTaGAGGTTGGACATGGCCACGGTCTTTTTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: FLAVPSSRGRAL*RLDMATVFLRS
Trigger: TGACCTCAAAAAGACCGTGGCCATGTCCAACCTGCAGAGAGCTCTGCCCCGAGACGATGGCACCGCCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CAA 72 bp GGGGCTCGAGGGAGGTCAAGCTCAGCGGGGTGGCTATaGCGGGTGATGATGACAGGCTCTTCCATCACATTG +
Preference number: 6 (lower is better)
Translates to: GARGRSSSAGWL*RVMMTGSSITL
Trigger: CAATGTGATGGAAGAGCCTGTCATCATCACCCGCAATAGCCACCCCGCTGAGCTTGACCTCCCTCGAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp CCCGGTGACGTTCTCGTAGGTGCACTTGGGCTGGGCTaGACACTCAGAAGGGGCCTCATTGTTATTATTGTG +
Preference number: 6 (lower is better)
Translates to: PGDVLVGALGLG*TLRRGLIVIIV
Trigger: CACAATAATAACAATGAGGCCCCTTCTGAGTGTCCAGCCCAGCCCAAGTGCACCTACGAGAACGTCACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259748.6
ENST00000373018.7
CDS CCA 72 bp CACATTTGTCACCTTGAACTTGGTGGGGTGGTTGTCTaGAACGCTGTCTCTGTTCAGGCAGCTGCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: HICHLELGGVVV*NAVSVQAAAAA
Trigger: AGCTGCTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACCCCACCAAGTTCAAGGTGACAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000422888.5
ENST00000426290.1
CDS CAA 72 bp TCATCCACATTTGTCACCTTGAACTTGGTGGGGTGGTaGTCTGGAACGCTGTCTCTGTTCAGGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SSTFVTLNLVGW*SGTLSLFRQLQ
Trigger: CTGCAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACCCCACCAAGTTCAAGGTGACAAATGTGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000422888.5
ENST00000426290.1
CDS CCA 72 bp TCATCATCCACATTTGTCACCTTGAACTTGGTGGGGTaGTTGTCTGGAACGCTGTCTCTGTTCAGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: SSSTFVTLNLVG*LSGTLSLFRQL
Trigger: CAGCTGCCTGAACAGAGACAGCGTTCCAGACAACCACCCCACCAAGTTCAAGGTGACAAATGTGGATGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259748.6
ENST00000373018.7
ENST00000422888.5
ENST00000426290.1