RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166225

Ensembl transcript IDs: ENST00000397997.6, ENST00000547219.5, ENST00000547414.5, ENST00000548154.5, ENST00000549092.5, ENST00000549921.6, ENST00000550169.5, ENST00000550316.5, ENST00000550389.5, ENST00000550937.5, ENST00000551325.1

Found 387 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACACAGGCCGCTTTCTAGTAACACTGAAGGCAAAGGAGCTGACTaGTGTAAGAGGAGGTGCGGTACTTCTGTTTCCTTTACATATGTT +
Preference number: 1 (lower is better)
Translates to: GHRPLSSNTEGKGAD*CKRRCGTSVSFTYV
Trigger: AACATATGTAAAGGAAACAGAAGTACCGCACCTCCTCTTACACCAGTCAGCTCCTTTGCCTTCAGTGTTACTAGAAAGCGGCCTGTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR GCA 90 bp TCTAGTAACACTGAAGGCAAAGGAGCTGACTGGTGTAAGAGGAGGTaGGGTACTTCTGTTTCCTTTACATATGTTTTGGCTCAAGTCAAA +
Preference number: 1 (lower is better)
Translates to: SSNTEGKGADWCKRR*GTSVSFTYVLAQVK
Trigger: TTTGACTTGAGCCAAAACATATGTAAAGGAAACAGAAGTACCGCACCTCCTCTTACACCAGTCAGCTCCTTTGCCTTCAGTGTTACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR GCA 90 bp CTAAATTATGATACAATCTCACTGCTACAAGACTTCCACTGTACCTaGTATGCTGGCAACAATATTAATATTTCATGGAAATCGAAGGAT +
Preference number: 1 (lower is better)
Translates to: LNYDTISLLQDFHCT*YAGNNINISWKSKD
Trigger: ATCCTTCGATTTCCATGAAATATTAATATTGTTGCCAGCATAGCAGGTACAGTGGAAGTCTTGTAGCAGTGAGATTGTATCATAATTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGGCAAAGGAGCTGACTaGTGTAAGAGGAGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: LGELLLKCWGRVPTETTRGKGAD*CKRRCG
Trigger: ACCGCACCTCCTCTTACACCAGTCAGCTCCTTTGCC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGGAGGCCACATACTGTaGACACTGAATCTACGAGCA +
Preference number: 2 (lower is better)
Translates to: LGELLLKCWGRVPTETTRGGHIL*TLNLRA
Trigger: TGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGATTCCTCATGTTACATaGTGGAGGCCACATACTGTG +
Preference number: 2 (lower is better)
Translates to: LGELLLKCWGRVPTETTRIPHVT*WRPHTV
Trigger: CACAGTATGTGGCCTCCAGCATGTAACATGAGGAAT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGACATACTGTGAACACTaGATCTACGAGCATTACTTT +
Preference number: 2 (lower is better)
Translates to: LGELLLKCWGRVPTETTRTYCEH*IYEHYF
Trigger: AAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTCTTTAAGGAGTACCTaGTCTACATTAATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: LGELLLKCWGRVPTETTRSLRST*STLIPF
Trigger: AAAGGGAATTAATGTAGAGCAGGTACTCCTTAAAGA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCTTATAAATAAATACTaGACAAGGGCAACCCTGTTA +
Preference number: 2 (lower is better)
Translates to: LGELLLKCWGRVPTETTRLINKY*TRATLL
Trigger: TAACAGGGTTGCCCTTGTCCAGTATTTATTTATAAG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAAAGGACAGCAGAGCTaGGGAACACTAGAGTGGGCA +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALKGQQS*GTLEWA
Trigger: TGCCCACTCTAGTGTTCCTCAGCTCTGCTGTCCTTT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGGAGGCCACATACTGTaGACACTGAATCTACGAGCA +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALGGHIL*TLNLRA
Trigger: TGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGGCAAAGGAGCTGACTaGTGTAAGAGGAGGTGCGGT +
Preference number: 2 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTGKGAD*CKRRCG
Trigger: ACCGCACCTCCTCTTACACCAGTCAGCTCCTTTGCC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCATCTTGTCTCCTTCCTaGCTTTCAGTGCACCAACAG +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALILSPS*LSVHQQ
Trigger: CTGTTGGTGCACTGAAAGGCAGGAAGGAGACAAGAT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGAATTACTGCTAAAGTaGTGGGGAAGAGTGCCCACA +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALELLLK*WGRVPT
Trigger: TGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCATTCCTCATGTTACATaGTGGAGGCCACATACTGTG +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALIPHVT*WRPHTV
Trigger: CACAGTATGTGGCCTCCAGCATGTAACATGAGGAAT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTGGTGTAAGAGGAGGTaGGGTACTTCTGTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALWCKRR*GTSVSF
Trigger: AAAGGAAACAGAAGTACCGCACCTCCTCTTACACCA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCTTCCTGCCTTTCAGTaGACCAACAGCAAAGCACAC +
Preference number: 2 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLPAFQ*TNSKAH
Trigger: GTGTGCTTTGCTGTTGGTGCACTGAAAGGCAGGAAG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCCTCATGTTACATGCTaGAGGCCACATACTGTGAAC +
Preference number: 2 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTPHVTC*RPHTVN
Trigger: GTTCACAGTATGTGGCCTCCAGCATGTAACATGAGG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGATTTTCCAAGAGTTTaGCATATGGAGACTCTTCAG +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALDFPRV*HMETLQ
Trigger: CTGAAGAGTCTCCATATGTCAAACTCTTGGAAAATC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTATTCCTCATGTTACATaGTGGAGGCCACATACTGTG +
Preference number: 2 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTIPHVT*WRPHTV
Trigger: CACAGTATGTGGCCTCCAGCATGTAACATGAGGAAT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGGTTGGATGCCAATATaGCTAAAACTTTTTCATGCT +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALGWMPI*LKLFHA
Trigger: AGCATGAAAAAGTTTTAGTCATATTGGCATCCAACC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCATGATACAATCTCACTaGTACAAGACTTCCACTGTA +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALMIQSH*YKTSTV
Trigger: TACAGTGGAAGTCTTGTAGCAGTGAGATTGTATCAT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAAAACTTCACAAAGGTaGAAACAACACAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: ILKMEPASWKLHTYTTALKTSQR*KQHNAF
Trigger: GAAAGCATTGTGTTGTTTGCACCTTTGTGAAGTTTT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR CAA 90 bp ATAAATGGAAACCTAATGGCACAAATGCCTCCAGAAAACAATGTGTaGTCAACAATCTATAGGAGAAAAACTTTCAGGAGATTGTGGTTC +
Preference number: 2 (lower is better)
Translates to: INGNLMAQMPPENNV*STIYRRKTFRRLWF
Trigger: GAACCACAATCTCCTGAAAGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGCCATTAGGTTTCCATTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACAAAACTTCACAAAGGTaGAAACAACACAATGCTTTC +
Preference number: 2 (lower is better)
Translates to: PHTVNTESTSITFKAYSYKTSQR*KQHNAF
Trigger: GAAAGCATTGTGTTGTTTGCACCTTTGTGAAGTTTT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTCTTTAAGGAGTACCTaGTCTACATTAATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: PHTVNTESTSITFKAYSYSLRST*STLIPF
Trigger: AAAGGGAATTAATGTAGAGCAGGTACTCCTTAAAGA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTCTTTAAGGAGTACCTaGTCTACATTAATTCCCTTT +
Preference number: 2 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNSLRST*STLIPF
Trigger: AAAGGGAATTAATGTAGAGCAGGTACTCCTTAAAGA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCACAACACGGTACACCTaGAGGGAACTTTGCATGTTA +
Preference number: 3 (lower is better)
Translates to: ILKMEPASWKLHTYTTALTTRYT*RELCML
Trigger: TAACATGCAAAGTTCCCTCAAGGTGTACCGTGTTGT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR GCA 72 bp GGTGACTACTGTACTACTTATACCAGTCTGTTTCCATaGTATAACTGTCCAATTGCCATAGAACTGCAATTA +
Preference number: 3 (lower is better)
Translates to: GDYCTTYTSLFP*YNCPIAIELQL
Trigger: TAATTGCAGTTCTATGGCAATTGGACAGTTATAGCATGGAAACAGACTGGTATAAGTAGTACAGTAGTCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR TCA 72 bp ATATTTTGCATTACTAATGCAAATGTGGCACACTGGTaGCTACTGTACTACTTATACCAGTCTGTTTCCATG +
Preference number: 3 (lower is better)
Translates to: IFCITNANVAHW*LLYYLYQSVSM
Trigger: CATGGAAACAGACTGGTATAAGTAGTACAGTAGTCACCAGTGTGCCACATTTGCATTAGTAATGCAAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR TCA 72 bp AAAGATTGCTTGGCAAATTTTCCTAAGTCCCAGATATaGTGTATTCTGGATATACTGAGAAGTGAAAAGCTT +
Preference number: 3 (lower is better)
Translates to: KDCLANFPKSQI*CILDILRSEKL
Trigger: AAGCTTTTCACTTCTCAGTATATCCAGAATACATCATATCTGGGACTTAGGAAAATTTGCCAAGCAATCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGAGATTCTTCCCCTACTaGAGGCAGGCGAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRRFFPY*RQASTS
Trigger: GGAAGTGCTCGCCTGCCTTCAGTAGGGGAAGAATCT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGAAAGGACAGCAGAGCTaGGGAACACTAGAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRKGQQS*GTLEWA
Trigger: TGCCCACTCTAGTGTTCCTCAGCTCTGCTGTCCTTT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCGTCCGCCCAGGTGCTaGGAGGGAGCAGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYRPPRC*EGAGRG
Trigger: CCCGCGCCCTGCTCCCTCTCAGCACCTGGGCGGACG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCATCCCTACTTAGCTTaGGGGCTTCCCAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRHPYLA*GLPKQE
Trigger: CTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGAACCCTCGCCTCCAATaGAACATGCACACTTGTGCG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRNPRLQ*NMHTCA
Trigger: CGCACAAGTGTGCATGTTCCATTGGAGGCGAGGGTT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGGGTATCTGAGGTACTaGTGGATGTCAGACGACCTC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRGYLRY*WMSDDL
Trigger: GAGGTCGTCTGACATCCACCAGTACCTCAGATACCC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCGTCCGCCCAGGTGCTaGGAGGGAGCAGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNRPPRC*EGAGRG
Trigger: CCCGCGCCCTGCTCCCTCTCAGCACCTGGGCGGACG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTTGTTCCAAGCTGGTTaGCATGCCACAGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRLFQAG*HATAAS
Trigger: AGATGCAGCTGTGGCATGTCAACCAGCTTGGAACAA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCCACAGAAGGATGTCTaGTTGACGGATGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRPQKDV*LTDGMK
Trigger: CTTCATCCCATCCGTCAAGCAGACATCCTTCTGTGG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGGTTGTCAGAGTCACTaGCACCTTCCAAGTCAACCT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRGCQSH*HLPSQP
Trigger: AGGTTGACTTGGAAGGTGGCAGTGACTCTGACAACC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTATCTGAGGTACTGGTaGATGTCAGACGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRYLRYW*MSDDLS
Trigger: GGAGAGGTCGTCTGACATCCACCAGTACCTCAGATA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTTACTGCTAAAGTGCTaGGGAAGAGTGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRLLLKC*GRVPTE
Trigger: CTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGTAGTGCCATTTTACTaGGTCACGTTTGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRVVPFY*VTFAGV
Trigger: TACACCCGCAAACGTGACTCAGTAAAATGGCACTAC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCCACTTCCACTAACTTaGTCTCTTCCAAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRPLPLT*SLPSCS
Trigger: GGAGCAACTTGGAAGAGATCAAGTTAGTGGAAGTGG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGCCTCCAATGGAACATaGACACTTGTGCGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRASNGT*TLVRFF
Trigger: GAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGTGCAAACAACACAATaGTTTCCAGGCTCACATGGG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRVQTTQ*FPGSHG
Trigger: CCCATGTGAGCCTGGAAAGCATTGTGTTGTTTGCAC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGAATTACTGCTAAAGTaGTGGGGAAGAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRELLLK*WGRVPT
Trigger: TGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCTGCATCATGGAAACTaGACACCTATACCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRLHHGN*TPIPLL
Trigger: GAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTCTGAGCTGAGTTGTTaGTATTCTGGGTATCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRSELSC*YSGYLR
Trigger: CCTCAGATACCCAGAATATCAACAACTCAGCTCAGA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTGGTGTAAGAGGAGGTaGGGTACTTCTGTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRWCKRR*GTSVSF
Trigger: AAAGGAAACAGAAGTACCGCACCTCCTCTTACACCA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGACAGTGTCTTTATCTaGACAGCTACAACAGCTACC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRDSVFI*TATTAT
Trigger: GGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGTTCCGATGGTTATCTaGGACAGTGTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRVPMVI*DSVFIW
Trigger: CCAGATAAAGACACTGTCCCAGATAACCATCGGAAC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTGCTTTCTGCAAATTTaGCATAGCAGCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRCFLQI*HSSSSL
Trigger: GAGAGAACTGCTGCTATGTCAAATTTGCAGAAAGCA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGTGTTATACCAAAAATaGGGAAGTAGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRVLYQK*GSRDGE
Trigger: TTCCCCATCCCTACTTCCTCATTTTTGGTATAACAC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGAATGTGGCACACTGGTaGCTACTGTACTACTTATAC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRNVAHW*LLYYLY
Trigger: GTATAAGTAGTACAGTAGTCACCAGTGTGCCACATT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTTTTTCCGCTCTTCTTaGACACCTGTAGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRFFRSS*TPVVLT
Trigger: TGTCAACACTACAGGTGTGCAAGAAGAGCGGAAAAA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGACCAGTCTGTTTCCATaGTATAACTGTCCAATTGCC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRTSLFP*YNCPIA
Trigger: GGCAATTGGACAGTTATAGCATGGAAACAGACTGGT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGAGTTGTTGATATTCTaGGTATCTGAGGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRELLIF*VSEVLV
Trigger: CACCAGTACCTCAGATACCCAGAATATCAACAACTC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGCCCTAAAACAAATTTaGCTCCTTCAGGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRALKQI*LLQVQE
Trigger: TTCTTGAACCTGAAGGAGTCAAATTTGTTTTAGGGC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGAATATTCTATTTTGTaGGCACTTGCTGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTREYSIL*ALAGTV
Trigger: AACAGTGCCAGCAAGTGCTCACAAAATAGAATATTC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGATTTTCCAAGAGTTTaGCATATGGAGACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRDFPRV*HMETLQ
Trigger: CTGAAGAGTCTCCATATGTCAAACTCTTGGAAAATC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGACCCAACCTCCAAAATaGATAAATAGATCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRTQPPK*INRSAL
Trigger: AAGGGCTGATCTATTTATTCATTTTGGAGGTTGGGT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCTGCCTCAGAAAATCTaGGATATATGGCCACAATTA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRLPQKI*DIWPQL
Trigger: TAATTGTGGCCATATATCTCAGATTTTCTGAGGCAG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCCTAAGTCCCAGATATaGTGTATTCTGGATATACTG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRPKSQI*CILDIL
Trigger: CAGTATATCCAGAATACATCATATCTGGGACTTAGG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGAGGTACATTTTTATATaGTGTGCCACAGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRRYIFI*CATVLG
Trigger: CCCCAAAACTGTGGCACAGCATATAAAAATGTACCT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTTAAACTTGTTCCGATaGTTATCTGGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRLNLFR*LSGTVS
Trigger: AGACACTGTCCCAGATAACCATCGGAACAAGTTTAA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTTACTAATGCAAATGTaGCACACTGGTGACTACTGT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRLLMQM*HTGDYC
Trigger: ACAGTAGTCACCAGTGTGCCACATTTGCATTAGTAA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGACTCCGACCCGCGCTaGAGCCCCTACTTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTDSDPR*SPYLEQ
Trigger: CTGCTCCAAGTAGGGGCTCCAGCGCGGGTCGGAGTC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGATGATACAATCTCACTaGTACAAGACTTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRMIQSH*YKTSTV
Trigger: TACAGTGGAAGTCTTGTAGCAGTGAGATTGTATCAT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGACACACACTACACATTaGACAAAACATTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRTHTTH*TKHLGI
Trigger: AATGCCCAAATGTTTTGTGCAATGTGTAGTGTGTGT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGGCAAAGGAGCTGACTaGTGTAAGAGGAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKGKGAD*CKRRCG
Trigger: ACCGCACCTCCTCTTACACCAGTCAGCTCCTTTGCC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGGGCAGAGTATACTGTaGTACGTCATAAAATATGTT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRGQSIL*YVIKYV
Trigger: AACATATTTTATGACGTACCACAGTATACTCTGCCC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAGATTCTTCCCCTACTaGAGGCAGGCGAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALRFFPY*RQASTS
Trigger: GGAAGTGCTCGCCTGCCTTCAGTAGGGGAAGAATCT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGAAAACTTCACAAAGGTaGAAACAACACAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRKTSQR*KQHNAF
Trigger: GAAAGCATTGTGTTGTTTGCACCTTTGTGAAGTTTT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGAGTCTCAGCCGCTGTaGCTACAAGGCCTCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNESQPL*LQGLSP
Trigger: CGGAGAGAGGCCTTGTAGGCACAGCGGCTGAGACTC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS-3UTR CCA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGATTTCTTTCTACAACTaGCTCTTCCACCACATTTAT +
Preference number: 4 (lower is better)
Translates to: LGELLLKCWGRVPTETTRISFYN*LFHHIY
Trigger: ATAAATGTGGTGGAAGAGCCAGTTGTAGAAAGAAAT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCCTGGTAGGGGTTTGTaGAAGGGGAGTTGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALPGRGL*KGSCRR
Trigger: ACGCCTACAACTCCCCTTCCACAAACCCCTACCAGG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGGCAAAGGAGCTGACTaGTGTAAGAGGAGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALGKGAD*CKRRCG
Trigger: ACCGCACCTCCTCTTACACCAGTCAGCTCCTTTGCC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAATTTGCCAGTCTTCCTaGAGGGAGGGAAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKICQSS*REGRHH
Trigger: ATGGTGCCTTCCCTCCCTCCAGGAAGACTGGCAAAT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
3UTR CAA 72 bp TGGGGAAGAGTGCCCACAGAGACAACACGGTACACCTaGAGGGAACTTTGCATGTTAAAAGTAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: WGRVPTETTRYT*RELCMLKVASF
Trigger: AAAGGAAGCTACTTTTAACATGCAAAGTTCCCTCAAGGTGTACCGTGTTGTCTCTGTGGGCACTCTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGGCGTTTTTGGAGTCTaGGGGTTGTCAGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALGVFGV*GLSESL
Trigger: CAGTGACTCTGACAACCCTCAGACTCCAAAAACGCC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCATCCCTACTTAGCTTaGGGGCTTCCCAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALHPYLA*GLPKQE
Trigger: CTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACTTCCTGCCTTTCAGTaGACCAACAGCAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKLPAFQ*TNSKAH
Trigger: GTGTGCTTTGCTGTTGGTGCACTGAAAGGCAGGAAG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATATCTGAGGTACTGGTaGATGTCAGACGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKYLRYW*MSDDLS
Trigger: GGAGAGGTCGTCTGACATCCACCAGTACCTCAGATA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGGGTATCTGAGGTACTaGTGGATGTCAGACGACCTC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALGYLRY*WMSDDL
Trigger: GAGGTCGTCTGACATCCACCAGTACCTCAGATACCC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCCTGGTAGGGGTTTGTaGAAGGGGAGTTGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYPGRGL*KGSCRR
Trigger: ACGCCTACAACTCCCCTTCCACAAACCCCTACCAGG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATTACTGCTAAAGTGCTaGGGAAGAGTGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKLLLKC*GRVPTE
Trigger: CTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGCTGTGCCACAGTTTTaGGGAGGGGGAGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALAVPQF*GGGGDK
Trigger: TTTATCTCCTCCCCCTCCCCAAAACTGTGGCACAGC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGCTGGAGCCCCTACTTaGAGCAGATCGAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTAGAPT*SRSSLS
Trigger: GCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGCTGGAGCCCCTACTTaGAGCAGATCGAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNAGAPT*SRSSLS
Trigger: GCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAGATTCTTCCCCTACTaGAGGCAGGCGAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNRFFPY*RQASTS
Trigger: GGAAGTGCTCGCCTGCCTTCAGTAGGGGAAGAATCT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGGCGTTTTTGGAGTCTaGGGGTTGTCAGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYGVFGV*GLSESL
Trigger: CAGTGACTCTGACAACCCTCAGACTCCAAAAACGCC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACTTCAGGTCAGTGTATaGTCAGCTCAGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKLQVSV*SAQLPV
Trigger: TACTGGAAGCTGAGCTGATCATACACTGACCTGAAG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCCACAGAAGGATGTCTaGTTGACGGATGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALPQKDV*LTDGMK
Trigger: CTTCATCCCATCCGTCAAGCAGACATCCTTCTGTGG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGTGCAAACAACACAATaGTTTCCAGGCTCACATGGG +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKVQTTQ*FPGSHG
Trigger: CCCATGTGAGCCTGGAAAGCATTGTGTTGTTTGCAC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCTTCCTGCCTTTCAGTaGACCAACAGCAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALLPAFQ*TNSKAH
Trigger: GTGTGCTTTGCTGTTGGTGCACTGAAAGGCAGGAAG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGAATTACTGCTAAAGTaGTGGGGAAGAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKELLLK*WGRVPT
Trigger: TGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACTGCATCATGGAAACTaGACACCTATACCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKLHHGN*TPIPLL
Trigger: GAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACCAAGCTGGTTGACATaGCACAGCTGCATCTTACTT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKPSWLT*HSCILL
Trigger: AAGTAAGATGCAGCTGTGGCATGTCAACCAGCTTGG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTATCTGAGGTACTGGTaGATGTCAGACGACCTCTCC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALYLRYW*MSDDLS
Trigger: GGAGAGGTCGTCTGACATCCACCAGTACCTCAGATA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACCATTAGGTAAGTTCTaGGCAGCAAATCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKPLGKF*AANPGV
Trigger: AACTCCAGGATTTGCTGCTCAGAACTTACCTAATGG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAACAGTCCCGACGCCTTaGATATTCTATTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKTVPTP*IFYFVS
Trigger: GCTCACAAAATAGAATATTCAAGGCGTCGGGACTGT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGGCGTTTTTGGAGTCTaGGGGTTGTCAGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTGVFGV*GLSESL
Trigger: CAGTGACTCTGACAACCCTCAGACTCCAAAAACGCC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAAAGGACAGCAGAGCTaGGGAACACTAGAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNKGQQS*GTLEWA
Trigger: TGCCCACTCTAGTGTTCCTCAGCTCTGCTGTCCTTT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCTTCAGGTCAGTGTATaGTCAGCTCAGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALLQVSV*SAQLPV
Trigger: TACTGGAAGCTGAGCTGATCATACACTGACCTGAAG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGCCTCCAATGGAACATaGACACTTGTGCGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALASNGT*TLVRFF
Trigger: GAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCATCCCTACTTAGCTTaGGGGCTTCCCAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNHPYLA*GLPKQE
Trigger: CTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGTGCAAACAACACAATaGTTTCCAGGCTCACATGGG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALVQTTQ*FPGSHG
Trigger: CCCATGTGAGCCTGGAAAGCATTGTGTTGTTTGCAC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAATTCCTCATGTTACATaGTGGAGGCCACATACTGTG +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKIPHVT*WRPHTV
Trigger: CACAGTATGTGGCCTCCAGCATGTAACATGAGGAAT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCTGCATCATGGAAACTaGACACCTATACCACTGCTC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALLHHGN*TPIPLL
Trigger: GAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATGTCTGCTTGACGGATaGGATGAAGCATCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKCLLDG*DEASPN
Trigger: ATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAACCCTCGCCTCCAATaGAACATGCACACTTGTGCG +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNNPRLQ*NMHTCA
Trigger: CGCACAAGTGTGCATGTTCCATTGGAGGCGAGGGTT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTAACCCTCGCCTCCAATaGAACATGCACACTTGTGCG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTNPRLQ*NMHTCA
Trigger: CGCACAAGTGTGCATGTTCCATTGGAGGCGAGGGTT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGGGTATCTGAGGTACTaGTGGATGTCAGACGACCTC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNGYLRY*WMSDDL
Trigger: GAGGTCGTCTGACATCCACCAGTACCTCAGATACCC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTATTTGCCAGTCTTCCTaGAGGGAGGGAAGGCACCAT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTICQSS*REGRHH
Trigger: ATGGTGCCTTCCCTCCCTCCAGGAAGACTGGCAAAT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGCTGTGCCACAGTTTTaGGGAGGGGGAGGAGATAAA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTAVPQF*GGGGDK
Trigger: TTTATCTCCTCCCCCTCCCCAAAACTGTGGCACAGC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGATAGGGTGCTGGTTTaGGCAGAGTATACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALDRVLV*AEYTVV
Trigger: TACCACAGTATACTCTGCCCAAACCAGCACCCTATC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGGTTCAAGAAGAATCTaGGGATCCCTGTCCTCAATA +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALGSRRI*GSLSSI
Trigger: TATTGAGGACAGGGATCCTCAGATTCTTCTTGAACC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCCACTTCCACTAACTTaGTCTCTTCCAAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYPLPLT*SLPSCS
Trigger: GGAGCAACTTGGAAGAGATCAAGTTAGTGGAAGTGG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTCTGAGCTGAGTTGTTaGTATTCTGGGTATCTGAGG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALSELSC*YSGYLR
Trigger: CCTCAGATACCCAGAATATCAACAACTCAGCTCAGA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGGAGGCCACATACTGTaGACACTGAATCTACGAGCA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNGGHIL*TLNLRA
Trigger: TGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCTTCAGGTCAGTGTATaGTCAGCTCAGCTTCCAGTA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYLQVSV*SAQLPV
Trigger: TACTGGAAGCTGAGCTGATCATACACTGACCTGAAG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAATTCTTAGCCTCTGCTaGAGCATCAGGAGTTTAATC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKILSLC*SIRSLI
Trigger: GATTAAACTCCTGATGCTGCAGCAGAGGCTAAGAAT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGCCTCCAATGGAACATaGACACTTGTGCGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYASNGT*TLVRFF
Trigger: GAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGGTTGTCAGAGTCACTaGCACCTTCCAAGTCAACCT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTGCQSH*HLPSQP
Trigger: AGGTTGACTTGGAAGGTGGCAGTGACTCTGACAACC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCTTCCTGCCTTTCAGTaGACCAACAGCAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNLPAFQ*TNSKAH
Trigger: GTGTGCTTTGCTGTTGGTGCACTGAAAGGCAGGAAG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATGGAGATTAATGTTCTaGCTTGACTGGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKWRLMF*LDWLFQ
Trigger: CTGAAACAGCCAGTCAAGGCAGAACATTAATCTCCA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAACCAGTCTGTTTCCATaGTATAACTGTCCAATTGCC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKTSLFP*YNCPIA
Trigger: GGCAATTGGACAGTTATAGCATGGAAACAGACTGGT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGTTCCGATGGTTATCTaGGACAGTGTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALVPMVI*DSVFIW
Trigger: CCAGATAAAGACACTGTCCCAGATAACCATCGGAAC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGAGTTGTTGATATTCTaGGTATCTGAGGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKELLIF*VSEVLV
Trigger: CACCAGTACCTCAGATACCCAGAATATCAACAACTC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAAAGTTAAAGACTGTTaGTGTACAGTCCCGACGCCT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALKVKDC*CTVPTP
Trigger: AGGCGTCGGGACTGTACACCAACAGTCTTTAACTTT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATGTACCATCATCTCGTaGCAGTGCTTTCTGCAAATT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKCTIIS*QCFLQI
Trigger: AATTTGCAGAAAGCACTGCCACGAGATGATGGTACA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCTTTCCAGGCTCACATaGGCAGATCAGTACTATTGT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALLSRLT*ADQYYC
Trigger: ACAATAGTACTGATCTGCCCATGTGAGCCTGGAAAG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTTACTGCTAAAGTGCTaGGGAAGAGTGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLLLKC*GRVPTE
Trigger: CTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGATAGGGTGCTGGTTTaGGCAGAGTATACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYDRVLV*AEYTVV
Trigger: TACCACAGTATACTCTGCCCAAACCAGCACCCTATC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGTAGTGCCATTTTACTaGGTCACGTTTGCGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNVVPFY*VTFAGV
Trigger: TACACCCGCAAACGTGACTCAGTAAAATGGCACTAC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGGTTCAAGAAGAATCTaGGGATCCCTGTCCTCAATA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYGSRRI*GSLSSI
Trigger: TATTGAGGACAGGGATCCTCAGATTCTTCTTGAACC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCCACTTCCACTAACTTaGTCTCTTCCAAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNPLPLT*SLPSCS
Trigger: GGAGCAACTTGGAAGAGATCAAGTTAGTGGAAGTGG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTCTGAGCTGAGTTGTTaGTATTCTGGGTATCTGAGG +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYSELSC*YSGYLR
Trigger: CCTCAGATACCCAGAATATCAACAACTCAGCTCAGA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAAATGCAGTTCTTCTCTaGGCTGAGTTGTTGATATTC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKNAVLL*AELLIF
Trigger: GAATATCAACAACTCAGCTCAGAGAAGAACTGCATT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAACCCAACCTCCAAAATaGATAAATAGATCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKTQPPK*INRSAL
Trigger: AAGGGCTGATCTATTTATTCATTTTGGAGGTTGGGT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACCTAAGTCCCAGATATaGTGTATTCTGGATATACTG +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKPKSQI*CILDIL
Trigger: CAGTATATCCAGAATACATCATATCTGGGACTTAGG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGTGTTATACCAAAAATaGGGAAGTAGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALVLYQK*GSRDGE
Trigger: TTCCCCATCCCTACTTCCTCATTTTTGGTATAACAC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAATGTGGCACACTGGTaGCTACTGTACTACTTATAC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALNVAHW*LLYYLY
Trigger: GTATAAGTAGTACAGTAGTCACCAGTGTGCCACATT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGTTTTCTTTGTTTGCTaGTTTAACCGTCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTVFFVC*FNRPPR
Trigger: CCTGGGCGGACGGTTAAATCAGCAAACAAAGAAAAC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATTTGTTAACAGAGGGTaGATCTCTTCGTTCATCACT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKFVNRG*ISSFIT
Trigger: AGTGATGAACGAAGAGATGCACCCTCTGTTAACAAA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATATTTTGTGAGCACTTaGTGGCACTGTTACATTCTC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKYFVST*WHCYIL
Trigger: GAGAATGTAACAGTGCCAGCAAGTGCTCACAAAATA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCGTGGCAGTGCTTTCTaGAAATTTGACATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYRGSAF*KFDIAA
Trigger: TGCTGCTATGTCAAATTTGCAGAAAGCACTGCCACG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATATCTTGTCTCCTTCCTaGCTTTCAGTGCACCAACAG +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNILSPS*LSVHQQ
Trigger: CTGTTGGTGCACTGAAAGGCAGGAAGGAGACAAGAT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTATCTTGTCTCCTTCCTaGCTTTCAGTGCACCAACAG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTILSPS*LSVHQQ
Trigger: CTGTTGGTGCACTGAAAGGCAGGAAGGAGACAAGAT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGAATTACTGCTAAAGTaGTGGGGAAGAGTGCCCACA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNELLLK*WGRVPT
Trigger: TGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTGGAGATTAATGTTCTaGCTTGACTGGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALWRLMF*LDWLFQ
Trigger: CTGAAACAGCCAGTCAAGGCAGAACATTAATCTCCA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACTGTTTCATCACTTTTaGATCTGGGCATCTACTTCT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKLFHHF*IWASTS
Trigger: AGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATTAAACTTGTTCCGATaGTTATCTGGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKLNLFR*LSGTVS
Trigger: AGACACTGTCCCAGATAACCATCGGAACAAGTTTAA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTGTCTGCTTGACGGATaGGATGAAGCATCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYCLLDG*DEASPN
Trigger: ATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGTCCTCAATACTACTTaGTTCTTCTTTTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKVLNTT*FFFWCA
Trigger: AGCACACCAAAAGAAGAACCAAGTAGTATTGAGGAC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGAGTTGTTGATATTCTaGGTATCTGAGGTACTGGTG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALELLIF*VSEVLV
Trigger: CACCAGTACCTCAGATACCCAGAATATCAACAACTC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTTTGTGAGCACTTGCTaGCACTGTTACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALFVSTC*HCYILC
Trigger: ACAGAGAATGTAACAGTGCCAGCAAGTGCTCACAAA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCTTTCCAGGCTCACATaGGCAGATCAGTACTATTGT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYLSRLT*ADQYYC
Trigger: ACAATAGTACTGATCTGCCCATGTGAGCCTGGAAAG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCCTCATGTTACATGCTaGAGGCCACATACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNPHVTC*RPHTVN
Trigger: GTTCACAGTATGTGGCCTCCAGCATGTAACATGAGG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACATGGAACCTGCATCATaGAAACTGCACACCTATACC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYMEPAS*KLHTYT
Trigger: GGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCAT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGATAGGGTGCTGGTTTaGGCAGAGTATACTGTGGTA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTDRVLV*AEYTVV
Trigger: TACCACAGTATACTCTGCCCAAACCAGCACCCTATC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACAATTTTGTTCCAAGCTaGTTGACATGCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYNFVPS*LTCHSC
Trigger: GCAGCTGTGGCATGTCAACCAGCTTGGAACAAAATT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCCATTAGGTAAGTTCTaGGCAGCAAATCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNPLGKF*AANPGV
Trigger: AACTCCAGGATTTGCTGCTCAGAACTTACCTAATGG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCCATTAGGTAAGTTCTaGGCAGCAAATCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTPLGKF*AANPGV
Trigger: AACTCCAGGATTTGCTGCTCAGAACTTACCTAATGG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTACAGTCCCGACGCCTTaGATATTCTATTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTTVPTP*IFYFVS
Trigger: GCTCACAAAATAGAATATTCAAGGCGTCGGGACTGT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATACAGTCCCGACGCCTTaGATATTCTATTTTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNTVPTP*IFYFVS
Trigger: GCTCACAAAATAGAATATTCAAGGCGTCGGGACTGT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTGCTTTCTGCAAATTTaGCATAGCAGCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYCFLQI*HSSSSL
Trigger: GAGAGAACTGCTGCTATGTCAAATTTGCAGAAAGCA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCCTAAGTCCCAGATATaGTGTATTCTGGATATACTG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALPKSQI*CILDIL
Trigger: CAGTATATCCAGAATACATCATATCTGGGACTTAGG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACACACATCAGAAATATaGATGAGATGCCAATACATC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKHTSEI*MRCQYI
Trigger: GATGTATTGGCATCTCATTCATATTTCTGATGTGTG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACATTCTTAGCCTCTGCTaGAGCATCAGGAGTTTAATC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYILSLC*SIRSLI
Trigger: GATTAAACTCCTGATGCTGCAGCAGAGGCTAAGAAT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCCATTCTGTGTTATTTaGTCCACTTCCACTAACTTG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALPFCVI*STSTNL
Trigger: CAAGTTAGTGGAAGTGGAGCAAATAACACAGAATGG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCGTGGCAGTGCTTTCTaGAAATTTGACATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTRGSAF*KFDIAA
Trigger: TGCTGCTATGTCAAATTTGCAGAAAGCACTGCCACG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCGTGGCAGTGCTTTCTaGAAATTTGACATAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNRGSAF*KFDIAA
Trigger: TGCTGCTATGTCAAATTTGCAGAAAGCACTGCCACG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTGGTGTAAGAGGAGGTaGGGTACTTCTGTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNWCKRR*GTSVSF
Trigger: AAAGGAAACAGAAGTACCGCACCTCCTCTTACACCA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAGGTACATTTTTATATaGTGTGCCACAGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALRYIFI*CATVLG
Trigger: CCCCAAAACTGTGGCACAGCATATAAAAATGTACCT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGACAGTGTCTTTATCTaGACAGCTACAACAGCTACC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNDSVFI*TATTAT
Trigger: GGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGTTCCGATGGTTATCTaGGACAGTGTCTTTATCTGG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTVPMVI*DSVFIW
Trigger: CCAGATAAAGACACTGTCCCAGATAACCATCGGAAC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTGTCTGCTTGACGGATaGGATGAAGCATCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTCLLDG*DEASPN
Trigger: ATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGTCCTCAATACTACTTaGTTCTTCTTTTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALVLNTT*FFFWCA
Trigger: AGCACACCAAAAGAAGAACCAAGTAGTATTGAGGAC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTTTGTGAGCACTTGCTaGCACTGTTACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYFVSTC*HCYILC
Trigger: ACAGAGAATGTAACAGTGCCAGCAAGTGCTCACAAA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAAAGTTAAAGACTGTTaGTGTACAGTCCCGACGCCT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNKVKDC*CTVPTP
Trigger: AGGCGTCGGGACTGTACACCAACAGTCTTTAACTTT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCTTTCCAGGCTCACATaGGCAGATCAGTACTATTGT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLSRLT*ADQYYC
Trigger: ACAATAGTACTGATCTGCCCATGTGAGCCTGGAAAG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATATGGAACCTGCATCATaGAAACTGCACACCTATACC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNMEPAS*KLHTYT
Trigger: GGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCAT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCATCAGCCCTTGCATTTaGAGATTAATGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALISPCI*RLMFCL
Trigger: AAGGCAGAACATTAATCTCCAAATGCAAGGGCTGAT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTTTCCAACCCTAGCATaGGATAGATGCTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALFPTLA*DRCCYD
Trigger: ATCATAACAGCATCTATCCCATGCTAGGGTTGGAAA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATATAACATTGAACGCTaGAGAGGGTCAACATTAGTA +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKYNIER*RGSTLV
Trigger: TACTAATGTTGACCCTCTCCAGCGTTCAATGTTATA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGGGCAGAGTATACTGTaGTACGTCATAAAATATGTT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKGQSIL*YVIKYV
Trigger: AACATATTTTATGACGTACCACAGTATACTCTGCCC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGCCCTAAAACAAATTTaGCTCCTTCAGGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYALKQI*LLQVQE
Trigger: TTCTTGAACCTGAAGGAGTCAAATTTGTTTTAGGGC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCACATACTGTGAACACTaGATCTACGAGCATTACTTT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALTYCEH*IYEHYF
Trigger: AAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGATTTTCCAAGAGTTTaGCATATGGAGACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYDFPRV*HMETLQ
Trigger: CTGAAGAGTCTCCATATGTCAAACTCTTGGAAAATC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCTGCCTCAGAAAATCTaGGATATATGGCCACAATTA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYLPQKI*DIWPQL
Trigger: TAATTGTGGCCATATATCTCAGATTTTCTGAGGCAG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAATGTGGCACACTGGTaGCTACTGTACTACTTATAC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNNVAHW*LLYYLY
Trigger: GTATAAGTAGTACAGTAGTCACCAGTGTGCCACATT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTATTCTTAGCCTCTGCTaGAGCATCAGGAGTTTAATC +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTILSLC*SIRSLI
Trigger: GATTAAACTCCTGATGCTGCAGCAGAGGCTAAGAAT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTTTTTCCGCTCTTCTTaGACACCTGTAGTGTTGACA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNFFRSS*TPVVLT
Trigger: TGTCAACACTACAGGTGTGCAAGAAGAGCGGAAAAA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTATTTTGTGAGCACTTaGTGGCACTGTTACATTCTC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYYFVST*WHCYIL
Trigger: GAGAATGTAACAGTGCCAGCAAGTGCTCACAAAATA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGCACACCTATACCACTaGTCTCTTTTAAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNAHLYH*SLLREQ
Trigger: CTGTTCTCTTAAAAGAGAGCAGTGGTATAGGTGTGC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGCACACCTATACCACTaGTCTCTTTTAAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTAHLYH*SLLREQ
Trigger: CTGTTCTCTTAAAAGAGAGCAGTGGTATAGGTGTGC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTGGAGATTAATGTTCTaGCTTGACTGGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTWRLMF*LDWLFQ
Trigger: CTGAAACAGCCAGTCAAGGCAGAACATTAATCTCCA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCTAGCATGGGATAGATaGTGTTATGATTTGTATGGA +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALLAWDR*CYDLYG
Trigger: TCCATACAAATCATAACAGCATCTATCCCATGCTAG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCACACACACTACACATTaGACAAAACATTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALTHTTH*TKHLGI
Trigger: AATGCCCAAATGTTTTGTGCAATGTGTAGTGTGTGT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATACCAGTCTGTTTCCATaGTATAACTGTCCAATTGCC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNTSLFP*YNCPIA
Trigger: GGCAATTGGACAGTTATAGCATGGAAACAGACTGGT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAATTTCTTTCTACAACTaGCTCTTCCACCACATTTAT +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKISFYN*LFHHIY
Trigger: ATAAATGTGGTGGAAGAGCCAGTTGTAGAAAGAAAT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTTTGTGAGCACTTGCTaGCACTGTTACATTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNFVSTC*HCYILC
Trigger: ACAGAGAATGTAACAGTGCCAGCAAGTGCTCACAAA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACATCAGCCCTTGCATTTaGAGATTAATGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYISPCI*RLMFCL
Trigger: AAGGCAGAACATTAATCTCCAAATGCAAGGGCTGAT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAAAAAGAAGGATCACATaGTCTACCAACAGAATTATC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKKRRIT*STNRII
Trigger: GATAATTCTGTTGGTAGACCATGTGATCCTTCTTTT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTTTCCAACCCTAGCATaGGATAGATGCTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYFPTLA*DRCCYD
Trigger: ATCATAACAGCATCTATCCCATGCTAGGGTTGGAAA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTTACTAATGCAAATGTaGCACACTGGTGACTACTGT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYLLMQM*HTGDYC
Trigger: ACAGTAGTCACCAGTGTGCCACATTTGCATTAGTAA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGACCAAACGTTTTATTaGGGTTTTATTGCAATCTAC +
Preference number: 4 (lower is better)
Translates to: TCWRPHTVNTESTSITFKDQTFY*GFIAIY
Trigger: GTAGATTGCAATAAAACCCCAATAAAACGTTTGGTC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGCCCTAAAACAAATTTaGCTCCTTCAGGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTALKQI*LLQVQE
Trigger: TTCTTGAACCTGAAGGAGTCAAATTTGTTTTAGGGC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAATGCAGTTCTTCTCTaGGCTGAGTTGTTGATATTC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNNAVLL*AELLIF
Trigger: GAATATCAACAACTCAGCTCAGAGAAGAACTGCATT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTAATGCAGTTCTTCTCTaGGCTGAGTTGTTGATATTC +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTNAVLL*AELLIF
Trigger: GAATATCAACAACTCAGCTCAGAGAAGAACTGCATT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGAATATTCTATTTTGTaGGCACTTGCTGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNEYSIL*ALAGTV
Trigger: AACAGTGCCAGCAAGTGCTCACAAAATAGAATATTC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGGTTGGATGCCAATATaGCTAAAACTTTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYGWMPI*LKLFHA
Trigger: AGCATGAAAAAGTTTTAGTCATATTGGCATCCAACC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCTGCCTCAGAAAATCTaGGATATATGGCCACAATTA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLPQKI*DIWPQL
Trigger: TAATTGTGGCCATATATCTCAGATTTTCTGAGGCAG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTTAAAACCTTTACCTTaGGGCAAAAATATGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNLKPLP*GKNMAA
Trigger: TGCCGCCATATTTTTGCCTCAAGGTAAAGGTTTTAA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTTAAAACCTTTACCTTaGGGCAAAAATATGGCGGCA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLKPLP*GKNMAA
Trigger: TGCCGCCATATTTTTGCCTCAAGGTAAAGGTTTTAA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCCATTCTGTGTTATTTaGTCCACTTCCACTAACTTG +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTPFCVI*STSTNL
Trigger: CAAGTTAGTGGAAGTGGAGCAAATAACACAGAATGG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTTTGTTAACAGAGGGTaGATCTCTTCGTTCATCACT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTFVNRG*ISSFIT
Trigger: AGTGATGAACGAAGAGATGCACCCTCTGTTAACAAA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTTTGTTAACAGAGGGTaGATCTCTTCGTTCATCACT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNFVNRG*ISSFIT
Trigger: AGTGATGAACGAAGAGATGCACCCTCTGTTAACAAA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACATGATACAATCTCACTaGTACAAGACTTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYMIQSH*YKTSTV
Trigger: TACAGTGGAAGTCTTGTAGCAGTGAGATTGTATCAT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCTAGCATGGGATAGATaGTGTTATGATTTGTATGGA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYLAWDR*CYDLYG
Trigger: TCCATACAAATCATAACAGCATCTATCCCATGCTAG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAGGTACATTTTTATATaGTGTGCCACAGTTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNRYIFI*CATVLG
Trigger: CCCCAAAACTGTGGCACAGCATATAAAAATGTACCT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCACAACAGTAAGGCATTaGAAAATCCAAAGTCATCTA +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALTTVRH*KIQSHL
Trigger: TAGATGACTTTGGATTTTGCAATGCCTTACTGTTGT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTTAAACTTGTTCCGATaGTTATCTGGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLNLFR*LSGTVS
Trigger: AGACACTGTCCCAGATAACCATCGGAACAAGTTTAA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGTCCTCAATACTACTTaGTTCTTCTTTTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNVLNTT*FFFWCA
Trigger: AGCACACCAAAAGAAGAACCAAGTAGTATTGAGGAC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTATCAGCCCTTGCATTTaGAGATTAATGTTCTGCCTT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTISPCI*RLMFCL
Trigger: AAGGCAGAACATTAATCTCCAAATGCAAGGGCTGAT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAAAAGAAGGATCACATaGTCTACCAACAGAATTATC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALKRRIT*STNRII
Trigger: GATAATTCTGTTGGTAGACCATGTGATCCTTCTTTT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGACCAAACGTTTTATTaGGGTTTTATTGCAATCTAC +
Preference number: 4 (lower is better)
Translates to: ILKMEPASWKLHTYTTALDQTFY*GFIAIY
Trigger: GTAGATTGCAATAAAACCCCAATAAAACGTTTGGTC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATACATACTGTGAACACTaGATCTACGAGCATTACTTT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNTYCEH*IYEHYF
Trigger: AAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGGTTGGATGCCAATATaGCTAAAACTTTTTCATGCT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNGWMPI*LKLFHA
Trigger: AGCATGAAAAAGTTTTAGTCATATTGGCATCCAACC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR TCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCACACATCAGAAATATaGATGAGATGCCAATACATC +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTHTSEI*MRCQYI
Trigger: GATGTATTGGCATCTCATTCATATTTCTGATGTGTG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTTACTGAGTCACGTTTaGGGGTGTATAAAATCAGTT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNLLSHV*GCIKSV
Trigger: AACTGATTTTATACACCCGCAAACGTGACTCAGTAA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTTACTGAGTCACGTTTaGGGGTGTATAAAATCAGTT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLLSHV*GCIKSV
Trigger: AACTGATTTTATACACCCGCAAACGTGACTCAGTAA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATATGATACAATCTCACTaGTACAAGACTTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNMIQSH*YKTSTV
Trigger: TACAGTGGAAGTCTTGTAGCAGTGAGATTGTATCAT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCCATTACTAAACTACTaGAAAGGACAAGTAGTATTC +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYPLLNY*KGQVVF
Trigger: GAATACTACTTGTCCTTTGCAGTAGTTTAGTAATGG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTCTAGCATGGGATAGATaGTGTTATGATTTGTATGGA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLAWDR*CYDLYG
Trigger: TCCATACAAATCATAACAGCATCTATCCCATGCTAG...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTACACACACTACACATTaGACAAAACATTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTTHTTH*TKHLGI
Trigger: AATGCCCAAATGTTTTGTGCAATGTGTAGTGTGTGT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACACAACAGTAAGGCATTaGAAAATCCAAAGTCATCTA +
Preference number: 4 (lower is better)
Translates to: PHTVNTESTSITFKAYSYTTVRH*KIQSHL
Trigger: TAGATGACTTTGGATTTTGCAATGCCTTACTGTTGT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTTGACATGCCACAGCTaGATCTTACTTTATGACAAA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLTCHS*ILLYDK
Trigger: TTTGTCATAAAGTAAGATGCAGCTGTGGCATGTCAA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS-3UTR CCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTATAACATTGAACGCTaGAGAGGGTCAACATTAGTA +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTYNIER*RGSTLV
Trigger: TACTAATGTTGACCCTCTCCAGCGTTCAATGTTATA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTAAAACTTCACAAAGGTaGAAACAACACAATGCTTTC +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTKTSQR*KQHNAF
Trigger: GAAAGCATTGTGTTGTTTGCACCTTTGTGAAGTTTT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTCTTTAAGGAGTACCTaGTCTACATTAATTCCCTTT +
Preference number: 4 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTSLRST*STLIPF
Trigger: AAAGGGAATTAATGTAGAGCAGGTACTCCTTAAAGA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCCATTACTAAACTACTaGAAAGGACAAGTAGTATTC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNPLLNY*KGQVVF
Trigger: GAATACTACTTGTCCTTTGCAGTAGTTTAGTAATGG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR GCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATACAACAGTAAGGCATTaGAAAATCCAAAGTCATCTA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNTTVRH*KIQSHL
Trigger: TAGATGACTTTGGATTTTGCAATGCCTTACTGTTGT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATATTTCTTTCTACAACTaGCTCTTCCACCACATTTAT +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNISFYN*LFHHIY
Trigger: ATAAATGTGGTGGAAGAGCCAGTTGTAGAAAGAAAT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAAAAGAAGGATCACATaGTCTACCAACAGAATTATC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNKRRIT*STNRII
Trigger: GATAATTCTGTTGGTAGACCATGTGATCCTTCTTTT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGACCAAACGTTTTATTaGGGTTTTATTGCAATCTAC +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNDQTFY*GFIAIY
Trigger: GTAGATTGCAATAAAACCCCAATAAAACGTTTGGTC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CCA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGCTGATTTAACCTTGTaGAATTCTCTTCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNADLTL*NSLLRK
Trigger: TTTTCTCAGAAGAGAATTCCACAAGGTTAAATCAGC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS CCA 90 bp AGGGCGCGGGTCGGCGGGCGCGAACCCCCAGACTCCGACCCGCGCTaGAGCCCCTACTTGGAGCAGATCGAGTCTCAGCCGCTGTGCCTA +
Preference number: 5 (lower is better)
Translates to: RARVGGREPPDSDPR*SPYLEQIESQPLCL
Trigger: TAGGCACAGCGGCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCGCGGGTCGGAGTCTGGGGGTTCGCGCCCGCCGACCCGCGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549921.6
ENST00000550316.5
ENST00000550389.5
ENST00000550937.5
CDS CCA 90 bp GCGGGCGCGAACCCCCAGACTCCGACCCGCGCTGGAGCCCCTACTTaGAGCAGATCGAGTCTCAGCCGCTGTGCCTACAAGGCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: AGANPQTPTRAGAPT*SRSSLSRCAYKASL
Trigger: GAGAGAGGCCTTGTAGGCACAGCGGCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCGCGGGTCGGAGTCTGGGGGTTCGCGCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549921.6
ENST00000550316.5
CDS GCA 90 bp CCGCGCTGGAGCCCCTACTTGGAGCAGATCGAGTCTCAGCCGCTGTaGCTACAAGGCCTCTCTCCGGCCCGAATCTTGGAAAAGCACTTC +
Preference number: 5 (lower is better)
Translates to: PRWSPYLEQIESQPL*LQGLSPARILEKHF
Trigger: GAAGTGCTTTTCCAAGATTCGGGCCGGAGAGAGGCCTTGTAGGCACAGCGGCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547219.5
CDS GCA 90 bp CTTCCCCTACTGAAGGCAGGCGAGCACTTCCCACAGAAGGATGTCTaGTTGACGGATGGGATGAAGCATCTCCAAATGAGGGATATCGGG +
Preference number: 5 (lower is better)
Translates to: LPLLKAGEHFPQKDV*LTDGMKHLQMRDIG
Trigger: CCCGATATCCCTCATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
ENST00000551325.1
CDS GCA 90 bp GGTGTGCTGCTTTCAGCGTTAGAAACCCTCGCCTCCAATGGAACATaGACACTTGTGCGGTTTTTCCGCTCTTCTTGCACACCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: GVLLSALETLASNGT*TLVRFFRSSCTPVV
Trigger: CACTACAGGTGTGCAAGAAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGCGAGGGTTTCTAACGCTGAAAGCAGCACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGTTTTTCCGCTCTTCTaGCACACCTGTAGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRVFPLF*HTCSVD
Trigger: GTCAACACTACAGGTGTGCAAGAAGAGCGGAAAAAC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGATGGAACATGCACACTaGTGCGGTTTTTCCGCTCTT +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRMEHAH*CGFSAL
Trigger: AAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCAT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CCA 90 bp GAAGGCAGGCGAGCACTTCCCACAGAAGGATGTCTGCTTGACGGATaGGATGAAGCATCTCCAAATGAGGGATATCGGGGATATCCATTA +
Preference number: 5 (lower is better)
Translates to: EGRRALPTEGCLLDG*DEASPNEGYRGYPL
Trigger: TAATGGATATCCCCGATATCCCTCATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
ENST00000551325.1
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGACATAGGTATGTACTaGTTCCTCAGCCACAAGCAA +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRDIGMY*FLSHKQ
Trigger: TTGCTTGTGGCTGAGGAACAAGTACATACCTATGTC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CCA 90 bp TTCTTTTGGTGTGCTGCTTTCAGCGTTAGAAACCCTCGCCTCCAATaGAACATGCACACTTGTGCGGTTTTTCCGCTCTTCTTGCACACC +
Preference number: 5 (lower is better)
Translates to: FFWCAAFSVRNPRLQ*NMHTCAVFPLFLHT
Trigger: GGTGTGCAAGAAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGCGAGGGTTTCTAACGCTGAAAGCAGCACACCAAAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTGTCCTCAATACTACTaGGTTCTTCTTTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRCPQYY*VLLLVC
Trigger: GCACACCAAAAGAAGAACCAAGTAGTATTGAGGACA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTACAGTCCCGACGCCTaGAATATTCTATTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRYSPDA*NILFCE
Trigger: CTCACAAAATAGAATATTCAAGGCGTCGGGACTGTA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCGCCTGGTAGGGGTTaGTGGAAGGGGAGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKAPGRG*WKGSCR
Trigger: CCTACAACTCCCCTTCCACAAACCCCTACCAGGCGC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGAATAGCACGGGGGAATaGGGAAGTACTTTTTCATCT +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRNSTGE*GSTFSS
Trigger: AGATGAAAAAGTACTTCCCAATTCCCCCGTGCTATT...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGTCTTTGGTCCTAAATaGTCATCTTCATCCCTACTT +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRVFGPK*SSSSLL
Trigger: AAGTAGGGATGAAGATGACAATTTAGGACCAAAGAC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGGCAGATCAGTACTATaGTGTCTAGTTTTCCTAGAT +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRGRSVL*CLVFLD
Trigger: ATCTAGGAAAACTAGACACAATAGTACTGATCTGCC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGACAACAGTAAGGCATaGCAAAATCCAAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRDNSKA*QNPKSS
Trigger: AGATGACTTTGGATTTTGCAATGCCTTACTGTTGTC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGGCTTCCAGTATCAACTaGAGTACCTCATTATGGATA +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRASSIN*STSLWI
Trigger: TATCCATAATGAGGTACTCAAGTTGATACTGGAAGC...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGCGCCTGGTAGGGGTTaGTGGAAGGGGAGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYAPGRG*WKGSCR
Trigger: CCTACAACTCCCCTTCCACAAACCCCTACCAGGCGC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGCCAGAAAACAATGTGTaGTCAACAATCTATAGGAGA +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRPENNV*STIYRR
Trigger: TCTCCTATAGATTGTTGACAACACATTGTTTTCTGG...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CTGGGGGAATTACTGCTAAAGTGCTGGGGAAGAGTGCCCACAGAGACAACACGGTATTTCATATACAATTaGGCAATGGTAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: LGELLLKCWGRVPTETTRYFIYN*AMVVPL
Trigger: CAGTGGGACTACCATTGCCAAATTGTATATGAAATA...CCGTGTTGTCTCTGTGGGCACTCTTCCCCAGCACTTTAGCAGTAATTCCCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCGCTGGAGCCCCTACTaGGAGCAGATCGAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYRWSPY*EQIESQ
Trigger: CTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549921.6
ENST00000550389.5
CDS CCA 90 bp AAGAATCTGAGGATCCCTGTCCTCAATACTACTTGGTTCTTCTTTTaGTGTGCTGCTTTCAGCGTTAGAAACCCTCGCCTCCAATGGAAC +
Preference number: 5 (lower is better)
Translates to: KNLRIPVLNTTWFFF*CAAFSVRNPRLQWN
Trigger: GTTCCATTGGAGGCGAGGGTTTCTAACGCTGAAAGCAGCACACCAAAAGAAGAACCAAGTAGTATTGAGGACAGGGATCCTCAGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGCGCCTGGTAGGGGTTaGTGGAAGGGGAGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTAPGRG*WKGSCR
Trigger: CCTACAACTCCCCTTCCACAAACCCCTACCAGGCGC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATCGCTGGAGCCCCTACTaGGAGCAGATCGAGTCTCAG +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNRWSPY*EQIESQ
Trigger: CTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCG...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000549921.6
ENST00000550389.5
CDS TCA 90 bp TTTCCTAGATGTACCATCATCTCGTGGCAGTGCTTTCTGCAAATTTaGCATAGCAGCAGTTCTCTCGATGTCTATCACGGCATACAGCTC +
Preference number: 5 (lower is better)
Translates to: FPRCTIISWQCFLQI*HSSSSLDVYHGIQL
Trigger: GAGCTGTATGCCGTGATAGACATCGAGAGAACTGCTGCTATGTCAAATTTGCAGAAAGCACTGCCACGAGATGATGGTACATCTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CCA 90 bp TTCAGGTTCAAGAAGAATCTGAGGATCCCTGTCCTCAATACTACTTaGTTCTTCTTTTGGTGTGCTGCTTTCAGCGTTAGAAACCCTCGC +
Preference number: 5 (lower is better)
Translates to: FRFKKNLRIPVLNTT*FFFWCAAFSVRNPR
Trigger: GCGAGGGTTTCTAACGCTGAAAGCAGCACACCAAAAGAAGAACCAAGTAGTATTGAGGACAGGGATCCTCAGATTCTTCTTGAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAACAGAAGGATGTCTGCTaGACGGATGGGATGAAGCAT +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKQKDVC*TDGMKH
Trigger: ATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTG...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTCATCCCTACTTAGCTaGCGGGCTTCCCAAACAGGA +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALSSLLS*RASQTG
Trigger: TCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGATTCCTTGTCCAGTTaGACACCTTCGACCACTTTC +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKDSLSS*TPSTTF
Trigger: GAAAGTGGTCGAAGGTGTCAAACTGGACAAGGAATC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCAGAAGGATGTCTGCTaGACGGATGGGATGAAGCAT +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALQKDVC*TDGMKH
Trigger: ATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGTTTTTCCGCTCTTCTaGCACACCTGTAGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKVFPLF*HTCSVD
Trigger: GTCAACACTACAGGTGTGCAAGAAGAGCGGAAAAAC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAATGGAACATGCACACTaGTGCGGTTTTTCCGCTCTT +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKMEHAH*CGFSAL
Trigger: AAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCAT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAAAAGGCAAAGATTCCTaGTCCAGTTTGACACCTTCG +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKKGKDS*SSLTPS
Trigger: CGAAGGTGTCAAACTGGACAAGGAATCTTTGCCTTT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCAGAAGGATGTCTGCTaGACGGATGGGATGAAGCAT +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYQKDVC*TDGMKH
Trigger: ATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGACATAGGTATGTACTaGTTCCTCAGCCACAAGCAA +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKDIGMY*FLSHKQ
Trigger: TTGCTTGTGGCTGAGGAACAAGTACATACCTATGTC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATCCACTTCCACTAACTaGATCTCTTCCAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKSTSTN*ISSKLL
Trigger: GAGCAACTTGGAAGAGATCAAGTTAGTGGAAGTGGA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTCATCCCTACTTAGCTaGCGGGCTTCCCAAACAGGA +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNSSLLS*RASQTG
Trigger: TCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTCATCCCTACTTAGCTaGCGGGCTTCCCAAACAGGA +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTSSLLS*RASQTG
Trigger: TCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAACAACACGGTACACCTaGAGGGAACTTTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKTTRYT*RELCML
Trigger: TAACATGCAAAGTTCCCTCAAGGTGTACCGTGTTGT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS TCA 90 bp GTTGGCCCTAAAACAAATTTGACTCCTTCAGGTTCAAGAAGAATCTaGGGATCCCTGTCCTCAATACTACTTGGTTCTTCTTTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: VGPKTNLTPSGSRRI*GSLSSILLGSSFGV
Trigger: CACACCAAAAGAAGAACCAAGTAGTATTGAGGACAGGGATCCTCAGATTCTTCTTGAACCTGAAGGAGTCAAATTTGTTTTAGGGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS TCA 90 bp GGCATCTACTTCTTAATGGTCATTTCAAAATGTGACCCAGAGACATaGAGTAAGCACACGCTGGCTGGAAAAATGGCACTGATACAGAAT +
Preference number: 5 (lower is better)
Translates to: GIYFLMVISKCDPET*SKHTLAGKMALIQN
Trigger: ATTCTGTATCAGTGCCATTTTTCCAGCCAGCGTGTGCTTACTTCATGTCTCTGGGTCACATTTTGAAATGACCATTAAGAAGTAGATGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550316.5
CDS CCA 90 bp CCAAGCTGGTTGACATGCCACAGCTGCATCTTACTTTATGACAAATaGACTGTTTCATCACTTTTGCATCTGGGCATCTACTTCTTAATG +
Preference number: 5 (lower is better)
Translates to: PSWLTCHSCILLYDK*TVSSLLHLGIYFLM
Trigger: CATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGATGCAGCTGTGGCATGTCAACCAGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549092.5
ENST00000549921.6
ENST00000550169.5
ENST00000550316.5
ENST00000550937.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGACATAGGTATGTACTaGTTCCTCAGCCACAAGCAA +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALDIGMY*FLSHKQ
Trigger: TTGCTTGTGGCTGAGGAACAAGTACATACCTATGTC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATGTCCTCAATACTACTaGGTTCTTCTTTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKCPQYY*VLLLVC
Trigger: GCACACCAAAAGAAGAACCAAGTAGTATTGAGGACA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTCCACTTCCACTAACTaGATCTCTTCCAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALSTSTN*ISSKLL
Trigger: GAGCAACTTGGAAGAGATCAAGTTAGTGGAAGTGGA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATACAGTCCCGACGCCTaGAATATTCTATTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKYSPDA*NILFCE
Trigger: CTCACAAAATAGAATATTCAAGGCGTCGGGACTGTA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGATCAGCCCTTGCATTaGGAGATTAATGTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALDQPLH*EINVLP
Trigger: AGGCAGAACATTAATCTCCAAATGCAAGGGCTGATC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAACTGTTTCATCACTTTaGCATCTGGGCATCTACTTC +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKTVSSL*HLGIYF
Trigger: GAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS TCA 90 bp GATTTTCATAGTTTAATAATGCAGTTCTTCTCTGAGCTGAGTTGTTaGTATTCTGGGTATCTGAGGTACTGGTGGATGTCAGACGACCTC +
Preference number: 5 (lower is better)
Translates to: DFHSLIMQFFSELSC*YSGYLRYWWMSDDL
Trigger: GAGGTCGTCTGACATCCACCAGTACCTCAGATACCCAGAATATCAACAACTCAGCTCAGAGAAGAACTGCATTATTAAACTATGAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS TCA 90 bp TCTGATATCAAAGTTAAAGACTGTTGGTGTACAGTCCCGACGCCTTaGATATTCTATTTTGTGAGCACTTGCTGGCACTGTTACATTCTC +
Preference number: 5 (lower is better)
Translates to: SDIKVKDCWCTVPTP*IFYFVSTCWHCYIL
Trigger: GAGAATGTAACAGTGCCAGCAAGTGCTCACAAAATAGAATATTCAAGGCGTCGGGACTGTACACCAACAGTCTTTAACTTTGATATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATCTATCCTGGAGTCATaGTTAATCTTGGTACGTATC +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKSILES*LILVRI
Trigger: GATACGTACCAAGATTAACAATGACTCCAGGATAGA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397997.6
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATTAATGACCTTAAACTaGTTCCGATGGTTATCTGGG +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKLMTLN*FRWLSG
Trigger: CCCAGATAACCATCGGAACAAGTTTAAGGTCATTAA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATTTACTGAGTCACGTTaGCGGGTGTATAAAATCAGT +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKFTESR*RVYKIS
Trigger: ACTGATTTTATACACCCGCAAACGTGACTCAGTAAA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGATTCCTTGTCCAGTTaGACACCTTCGACCACTTTC +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNDSLSS*TPSTTF
Trigger: GAAAGTGGTCGAAGGTGTCAAACTGGACAAGGAATC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACAAAGGCAAAGATTCCTaGTCCAGTTTGACACCTTCG +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYKGKDS*SSLTPS
Trigger: CGAAGGTGTCAAACTGGACAAGGAATCTTTGCCTTT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTCCACTTCCACTAACTaGATCTCTTCCAAGTTGCTC +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYSTSTN*ISSKLL
Trigger: GAGCAACTTGGAAGAGATCAAGTTAGTGGAAGTGGA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATTTTCATACACCAGTTaGTTAACAGAGGGTGCATCT +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKFSYTS*LTEGAS
Trigger: AGATGCACCCTCTGTTAACAAACTGGTGTATGAAAA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACACAACACGGTACACCTaGAGGGAACTTTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYTTRYT*RELCML
Trigger: TAACATGCAAAGTTCCCTCAAGGTGTACCGTGTTGT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATCTCCTAATCCATCATaGTCCTATGATTCGGTTACT +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKSPNPS*SYDSVT
Trigger: AGTAACCGAATCATAGGACAATGATGGATTAGGAGA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGAGTCATTGTTAATCTaGGTACGTATCTATAGGAAG +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKESLLI*VRIYRK
Trigger: CTTCCTATAGATACGTACCAAGATTAACAATGACTC...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397997.6
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTTAATGACCTTAAACTaGTTCCGATGGTTATCTGGG +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALLMTLN*FRWLSG
Trigger: CCCAGATAACCATCGGAACAAGTTTAAGGTCATTAA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTGTCCTCAATACTACTaGGTTCTTCTTTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYCPQYY*VLLLVC
Trigger: GCACACCAAAAGAAGAACCAAGTAGTATTGAGGACA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTTTTCATACACCAGTTaGTTAACAGAGGGTGCATCT +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALFSYTS*LTEGAS
Trigger: AGATGCACCCTCTGTTAACAAACTGGTGTATGAAAA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGTCTTTGGTCCTAAATaGTCATCTTCATCCCTACTT +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALVFGPK*SSSSLL
Trigger: AAGTAGGGATGAAGATGACAATTTAGGACCAAAGAC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTTAGAGATGGGGTCTTaGGTCCTAAATTGTCATCTT +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALLEMGS*VLNCHL
Trigger: AAGATGACAATTTAGGACCAAAGACCCCATCTCTAA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTACAGTCCCGACGCCTaGAATATTCTATTTTGTGAG +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYYSPDA*NILFCE
Trigger: CTCACAAAATAGAATATTCAAGGCGTCGGGACTGTA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCGGCAGATCAGTACTATaGTGTCTAGTTTTCCTAGAT +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALGRSVL*CLVFLD
Trigger: ATCTAGGAAAACTAGACACAATAGTACTGATCTGCC...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTACAACACGGTACACCTaGAGGGAACTTTGCATGTTA +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTTTRYT*RELCML
Trigger: TAACATGCAAAGTTCCCTCAAGGTGTACCGTGTTGT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGATCAGCCCTTGCATTaGGAGATTAATGTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNDQPLH*EINVLP
Trigger: AGGCAGAACATTAATCTCCAAATGCAAGGGCTGATC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGATCAGCCCTTGCATTaGGAGATTAATGTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTDQPLH*EINVLP
Trigger: AGGCAGAACATTAATCTCCAAATGCAAGGGCTGATC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAATATGGCGGCACATTGTaGGGAAATTATGAAAACATA +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKYGGTL*GNYENI
Trigger: TATGTTTTCATAATTTCCCAACAATGTGCCGCCATA...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ACATGCTGGAGGCCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAAAATATGGCGGCACATaGTTGGGAAATTATGAAAAC +
Preference number: 5 (lower is better)
Translates to: TCWRPHTVNTESTSITFKKYGGT*LGNYEN
Trigger: GTTTTCATAATTTCCCAACAATGTGCCGCCATATTT...TTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGGCCTCCAGCATGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACAATAGCACGGGGGAATaGGGAAGTACTTTTTCATCT +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYNSTGE*GSTFSS
Trigger: AGATGAAAAAGTACTTCCCAATTCCCCCGTGCTATT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCCCAGAAAACAATGTGTaGTCAACAATCTATAGGAGA +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALPENNV*STIYRR
Trigger: TCTCCTATAGATTGTTGACAACACATTGTTTTCTGG...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCTATGGCGGCACATTGTaGGGAAATTATGAAAACATA +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALYGGTL*GNYENI
Trigger: TATGTTTTCATAATTTCCCAACAATGTGCCGCCATA...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCAAATATGGCGGCACATaGTTGGGAAATTATGAAAAC +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALKYGGT*LGNYEN
Trigger: GTTTTCATAATTTCCCAACAATGTGCCGCCATATTT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTAATAGCACGGGGGAATaGGGAAGTACTTTTTCATCT +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTNSTGE*GSTFSS
Trigger: AGATGAAAAAGTACTTCCCAATTCCCCCGTGCTATT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp ATATTAAAAATGGAACCTGCATCATGGAAACTGCACACCTATACCACTGCTCTCACAAAATGTATGAAGTaGGCACTGATAGGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: ILKMEPASWKLHTYTTALTKCMK*ALIGRN
Trigger: ATTTCTCCCTATCAGTGCCAACTTCATACATTTTGT...GAGAGCAGTGGTATAGGTGTGCAGTTTCCATGATGCAGGTTCCATTTTTAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACGACAACAGTAAGGCATaGCAAAATCCAAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYDNSKA*QNPKSS
Trigger: AGATGACTTTGGATTTTGCAATGCCTTACTGTTGTC...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTTTAATGACCTTAAACTaGTTCCGATGGTTATCTGGG +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTLMTLN*FRWLSG
Trigger: CCCAGATAACCATCGGAACAAGTTTAAGGTCATTAA...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTTTTCATACACCAGTTaGTTAACAGAGGGTGCATCT +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNFSYTS*LTEGAS
Trigger: AGATGCACCCTCTGTTAACAAACTGGTGTATGAAAA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGTCTTTGGTCCTAAATaGTCATCTTCATCCCTACTT +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNVFGPK*SSSSLL
Trigger: AAGTAGGGATGAAGATGACAATTTAGGACCAAAGAC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATTTAGAGATGGGGTCTTaGGTCCTAAATTGTCATCTT +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNLEMGS*VLNCHL
Trigger: AAGATGACAATTTAGGACCAAAGACCCCATCTCTAA...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGGCAGATCAGTACTATaGTGTCTAGTTTTCCTAGAT +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNGRSVL*CLVFLD
Trigger: ATCTAGGAAAACTAGACACAATAGTACTGATCTGCC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACCCAGAAAACAATGTGTaGTCAACAATCTATAGGAGA +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYPENNV*STIYRR
Trigger: TCTCCTATAGATTGTTGACAACACATTGTTTTCTGG...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTAATAAAAGGAAATATTaGCCAGTCTTCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTNKRKY*PVFLEG
Trigger: TCCCTCCAGGAAGACTGGCAAATATTTCCTTTTATT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATAATAAAAGGAAATATTaGCCAGTCTTCCTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNNKRKY*PVFLEG
Trigger: TCCCTCCAGGAAGACTGGCAAATATTTCCTTTTATT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACAAATATGGCGGCACATaGTTGGGAAATTATGAAAAC +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYKYGGT*LGNYEN
Trigger: GTTTTCATAATTTCCCAACAATGTGCCGCCATATTT...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTATTTCATATACAATTaGGCAATGGTAGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYYFIYN*AMVVPL
Trigger: CAGTGGGACTACCATTGCCAAATTGTATATGAAATA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATGACAACAGTAAGGCATaGCAAAATCCAAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNDNSKA*QNPKSS
Trigger: AGATGACTTTGGATTTTGCAATGCCTTACTGTTGTC...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTGCTTCCAGTATCAACTaGAGTACCTCATTATGGATA +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTASSIN*STSLWI
Trigger: TATCCATAATGAGGTACTCAAGTTGATACTGGAAGC...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp CCACATACTGTGAACACTGAATCTACGAGCATTACTTTCAAAGCCTATAGTTACTTTGCTGATTTAACCTaGTGGAATTCTCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: PHTVNTESTSITFKAYSYFADLT*WNSLLR
Trigger: TCTCAGAAGAGAATTCCACAAGGTTAAATCAGCAAA...GTAACTATAGGCTTTGAAAGTAATGCTCGTAGATTCAGTGTTCACAGTATGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549921.6
CDS-3UTR CAA 90 bp GCACAAATGCCTCCAGAAAACAATGTGTTGTCAACAATCTATAGGAGAAAAACTACAAAATGTATGAAGTaGGCACTGATAGGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: AQMPPENNVLSTIYRRKTTKCMK*ALIGRN
Trigger: ATTTCTCCCTATCAGTGCCAACTTCATACATTTTGT...AGTTTTTCTCCTATAGATTGTTGACAACACATTGTTTTCTGGAGGCATTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS-3UTR CAA 90 bp TTAAATAGGCACTGTGAAAACGGGAATGCTGCTGTACAACGAGTAGTATATAATACAAAATGTATGAAGTaGGCACTGATAGGGAGAAAT +
Preference number: 5 (lower is better)
Translates to: LNRHCENGNAAVQRVVYNTKCMK*ALIGRN
Trigger: ATTTCTCCCTATCAGTGCCAACTTCATACATTTTGT...ATTATATACTACTCGTTGTACAGCAGCATTCCCGTTTTCACAGTGCCTATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CCA 72 bp GTCGGCGGGCGCGAACCCCCAGACTCCGACCCGCGCTaGAGCCCCTACTTGGAGCAGATCGAGTCTCAGCCG +
Preference number: 6 (lower is better)
Translates to: VGGREPPDSDPR*SPYLEQIESQP
Trigger: CGGCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCGCGGGTCGGAGTCTGGGGGTTCGCGCCCGCCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549092.5
ENST00000549921.6
ENST00000550316.5
ENST00000550389.5
ENST00000550937.5
CDS CAA 90 bp GGCGGGCGCGAACCCCCAGACTCCGACCCGCGCTGGAGCCCCTACTaGGAGCAGATCGAGTCTCAGCCGCTGTGCCTACAAGGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: GGREPPDSDPRWSPY*EQIESQPLCLQGLS
Trigger: AGAGAGGCCTTGTAGGCACAGCGGCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCGCGGGTCGGAGTCTGGGGGTTCGCGCCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549921.6
ENST00000550316.5
CDS CCA 72 bp AACCCCCAGACTCCGACCCGCGCTGGAGCCCCTACTTaGAGCAGATCGAGTCTCAGCCGCTGTGCCTACAAG +
Preference number: 6 (lower is better)
Translates to: NPQTPTRAGAPT*SRSSLSRCAYK
Trigger: CTTGTAGGCACAGCGGCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCGCGGGTCGGAGTCTGGGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549921.6
ENST00000550316.5
ENST00000550389.5
ENST00000550937.5
CDS CAA 72 bp GAACCCCCAGACTCCGACCCGCGCTGGAGCCCCTACTaGGAGCAGATCGAGTCTCAGCCGCTGTGCCTACAA +
Preference number: 6 (lower is better)
Translates to: EPPDSDPRWSPY*EQIESQPLCLQ
Trigger: TTGTAGGCACAGCGGCTGAGACTCGATCTGCTCCAAGTAGGGGCTCCAGCGCGGGTCGGAGTCTGGGGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549921.6
ENST00000550316.5
ENST00000550389.5
ENST00000550937.5
CDS GCA 72 bp AGCCCCTACTTGGAGCAGATCGAGTCTCAGCCGCTGTaGCTACAAGGCCTCTCTCCGGCCCGAATCTTGGAA +
Preference number: 6 (lower is better)
Translates to: SPYLEQIESQPL*LQGLSPARILE
Trigger: TTCCAAGATTCGGGCCGGAGAGAGGCCTTGTAGGCACAGCGGCTGAGACTCGATCTGCTCCAAGTAGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000550316.5
CDS CAA 90 bp CCCCTACTGAAGGCAGGCGAGCACTTCCCACAGAAGGATGTCTGCTaGACGGATGGGATGAAGCATCTCCAAATGAGGGATATCGGGGAT +
Preference number: 6 (lower is better)
Translates to: PLLKAGEHFPQKDVC*TDGMKHLQMRDIGD
Trigger: ATCCCCGATATCCCTCATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
ENST00000551325.1
CDS GCA 72 bp CTGAAGGCAGGCGAGCACTTCCCACAGAAGGATGTCTaGTTGACGGATGGGATGAAGCATCTCCAAATGAGG +
Preference number: 6 (lower is better)
Translates to: LKAGEHFPQKDV*LTDGMKHLQMR
Trigger: CCTCATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
ENST00000551325.1
CDS CCA 72 bp CGAGCACTTCCCACAGAAGGATGTCTGCTTGACGGATaGGATGAAGCATCTCCAAATGAGGGATATCGGGGA +
Preference number: 6 (lower is better)
Translates to: RALPTEGCLLDG*DEASPNEGYRG
Trigger: TCCCCGATATCCCTCATTTGGAGATGCTTCATCCCATCCGTCAAGCAGACATCCTTCTGTGGGAAGTGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
ENST00000551325.1
CDS TCA 72 bp AGCCACAAGCAAAGGATGTGTAGATTCTTCCCCTACTaGAGGCAGGCGAGCACTTCCCACAGAAGGATGTCT +
Preference number: 6 (lower is better)
Translates to: SHKQRMCRFFPY*RQASTSHRRMS
Trigger: AGACATCCTTCTGTGGGAAGTGCTCGCCTGCCTTCAGTAGGGGAAGAATCTACACATCCTTTGCTTGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CCA 72 bp TGTGCTGCTTTCAGCGTTAGAAACCCTCGCCTCCAATaGAACATGCACACTTGTGCGGTTTTTCCGCTCTTC +
Preference number: 6 (lower is better)
Translates to: CAAFSVRNPRLQ*NMHTCAVFPLF
Trigger: GAAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGCGAGGGTTTCTAACGCTGAAAGCAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS GCA 72 bp CTTTCAGCGTTAGAAACCCTCGCCTCCAATGGAACATaGACACTTGTGCGGTTTTTCCGCTCTTCTTGCACA +
Preference number: 6 (lower is better)
Translates to: LSALETLASNGT*TLVRFFRSSCT
Trigger: TGTGCAAGAAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGCGAGGGTTTCTAACGCTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 90 bp CGCCTCCAATGGAACATGCACACTTGTGCGGTTTTTCCGCTCTTCTaGCACACCTGTAGTGTTGACATAGGTATGTACTTGTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: RLQWNMHTCAVFPLF*HTCSVDIGMYLFLS
Trigger: GCTGAGGAACAAGTACATACCTATGTCAACACTACAGGTGTGCAAGAAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCATTGGAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS TCA 72 bp CACGCTGGCTGGAAAAATGGCACTGATACAGAATTCTaGATACAGGGTTGCCACAAACCTTCAATCGTCCGC +
Preference number: 6 (lower is better)
Translates to: HAGWKNGTDTEF*IQGCHKPSIVR
Trigger: GCGGACGATTGAAGGTTTGTGGCAACCCTGTATTCAGAATTCTGTATCAGTGCCATTTTTCCAGCCAGCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550316.5
CDS CCA 72 bp CTTGTTCCGATGGTTATCTGGGACAGTGTCTTTATCTaGACAGCTACAACAGCTACCCATGGCTTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: LVPMVIWDSVFI*TATTATHGFFR
Trigger: TCTGAAGAAGCCATGGGTAGCTGTTGTAGCTGTCCAGATAAAGACACTGTCCCAGATAACCATCGGAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397997.6
ENST00000547219.5
ENST00000548154.5
ENST00000549092.5
ENST00000549921.6
ENST00000550389.5
ENST00000550937.5
ENST00000551325.1
CDS TCA 72 bp AATGAGGGATATCGGGGATATCCATTAGGTAAGTTCTaGGCAGCAAATCCTGGAGTTGTAGGTGTTCGAGGT +
Preference number: 6 (lower is better)
Translates to: NEGYRGYPLGKF*AANPGVVGVRG
Trigger: ACCTCGAACACCTACAACTCCAGGATTTGCTGCTCAGAACTTACCTAATGGATATCCCCGATATCCCTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
ENST00000551325.1
CDS TCA 72 bp CATGAAGTAAGCACACGCTGGCTGGAAAAATGGCACTaGTACAGAATTCTGAATACAGGGTTGCCACAAACC +
Preference number: 6 (lower is better)
Translates to: HEVSTRWLEKWH*YRILNTGLPQT
Trigger: GGTTTGTGGCAACCCTGTATTCAGAATTCTGTATCAGTGCCATTTTTCCAGCCAGCGTGTGCTTACTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550316.5
CDS GCA 72 bp TTGGTCCTAAATTGTCATCTTCATCCCTACTTAGCTTaGGGGCTTCCCAAACAGGAGGCAAAGATGGTAGAT +
Preference number: 6 (lower is better)
Translates to: LVLNCHLHPYLA*GLPKQEAKMVD
Trigger: ATCTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGAAGATGACAATTTAGGACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 72 bp TGGAACATGCACACTTGTGCGGTTTTTCCGCTCTTCTaGCACACCTGTAGTGTTGACATAGGTATGTACTTG +
Preference number: 6 (lower is better)
Translates to: WNMHTCAVFPLF*HTCSVDIGMYL
Trigger: CAAGTACATACCTATGTCAACACTACAGGTGTGCAAGAAGAGCGGAAAAACCGCACAAGTGTGCATGTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 72 bp TTTGGTCCTAAATTGTCATCTTCATCCCTACTTAGCTaGCGGGCTTCCCAAACAGGAGGCAAAGATGGTAGA +
Preference number: 6 (lower is better)
Translates to: FGPKLSSSSLLS*RASQTGGKDGR
Trigger: TCTACCATCTTTGCCTCCTGTTTGGGAAGCCCGCAAGCTAAGTAGGGATGAAGATGACAATTTAGGACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 90 bp AAACAACACAATGCTTTCCAGGCTCACATGGGCAGATCAGTACTATaGTGTCTAGTTTTCCTAGATGTACCATCATCTCGTGGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: KQHNAFQAHMGRSVL*CLVFLDVPSSRGSA
Trigger: AGCACTGCCACGAGATGATGGTACATCTAGGAAAACTAGACACAATAGTACTGATCTGCCCATGTGAGCCTGGAAAGCATTGTGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 90 bp CACAGCTGCATCTTACTTTATGACAAATGGACTGTTTCATCACTTTaGCATCTGGGCATCTACTTCTTAATGGTCATTTCGTCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: HSCILLYDKWTVSSL*HLGIYFLMVISSAQ
Trigger: CTGGGCGGACGAAATGACCATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGATGCAGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547414.5
ENST00000548154.5
ENST00000549921.6
ENST00000550937.5
CDS TCA 72 bp AAAGTTAAAGACTGTTGGTGTACAGTCCCGACGCCTTaGATATTCTATTTTGTGAGCACTTGCTGGCACTGT +
Preference number: 6 (lower is better)
Translates to: KVKDCWCTVPTP*IFYFVSTCWHC
Trigger: ACAGTGCCAGCAAGTGCTCACAAAATAGAATATTCAAGGCGTCGGGACTGTACACCAACAGTCTTTAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS TCA 72 bp TTCTTAATGGTCATTTCAAAATGTGACCCAGAGACATaGAGTAAGCACACGCTGGCTGGAAAAATGGCACTG +
Preference number: 6 (lower is better)
Translates to: FLMVISKCDPET*SKHTLAGKMAL
Trigger: CAGTGCCATTTTTCCAGCCAGCGTGTGCTTACTTCATGTCTCTGGGTCACATTTTGAAATGACCATTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550316.5
CDS CCA 72 bp AAGAAGAATCTGAGGATCCCTGTCCTCAATACTACTTaGTTCTTCTTTTGGTGTGCTGCTTTCAGCGTTAGA +
Preference number: 6 (lower is better)
Translates to: KKNLRIPVLNTT*FFFWCAAFSVR
Trigger: TCTAACGCTGAAAGCAGCACACCAAAAGAAGAACCAAGTAGTATTGAGGACAGGGATCCTCAGATTCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 72 bp AATGCTTTCCAGGCTCACATGGGCAGATCAGTACTATaGTGTCTAGTTTTCCTAGATGTACCATCATCTCGT +
Preference number: 6 (lower is better)
Translates to: NAFQAHMGRSVL*CLVFLDVPSSR
Trigger: ACGAGATGATGGTACATCTAGGAAAACTAGACACAATAGTACTGATCTGCCCATGTGAGCCTGGAAAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 90 bp GCATTGGATCTAGATTATTATGGTAGCCATTTAGAGATGGGGTCTTaGGTCCTAAATTGTCATCTTCATCCCTACTTAGCTTGCGGGCTT +
Preference number: 6 (lower is better)
Translates to: ALDLDYYGSHLEMGS*VLNCHLHPYLACGL
Trigger: AAGCCCGCAAGCTAAGTAGGGATGAAGATGACAATTTAGGACCAAAGACCCCATCTCTAAATGGCTACCATAATAATCTAGATCCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 90 bp CACAGCTGCATCTTACTTTATGACAAATGGACTGTTTCATCACTTTaGCATCTGGGCATCTACTTCTTAATGGTCATTTCTGTACACCTG +
Preference number: 6 (lower is better)
Translates to: HSCILLYDKWTVSSL*HLGIYFLMVISVHL
Trigger: CAGGTGTACAGAAATGACCATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGATGCAGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549092.5
ENST00000550169.5
CDS TCA 72 bp AGTTTAATAATGCAGTTCTTCTCTGAGCTGAGTTGTTaGTATTCTGGGTATCTGAGGTACTGGTGGATGTCA +
Preference number: 6 (lower is better)
Translates to: SLIMQFFSELSC*YSGYLRYWWMS
Trigger: TGACATCCACCAGTACCTCAGATACCCAGAATATCAACAACTCAGCTCAGAGAAGAACTGCATTATTAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 72 bp GGGATAGATAGCCCATTTATATTTTCATACACCAGTTaGTTAACAGAGGGTGCATCTCTTCGTTCATCACTG +
Preference number: 6 (lower is better)
Translates to: GIDSPFIFSYTS*LTEGASLRSSL
Trigger: CAGTGATGAACGAAGAGATGCACCCTCTGTTAACAAACTGGTGTATGAAAATATAAATGGGCTATCTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 72 bp ACCTTGCAGAAGATGACAGCAAGTAAACTTGCCTGCTaGATCTTGATGATGGTAGAAAGAAGAAAATCTCCT +
Preference number: 6 (lower is better)
Translates to: TLQKMTASKLAC*ILMMVERRKSP
Trigger: AGGAGATTTTCTTCTTTCTACCATCATCAAGATCAAGCAGGCAAGTTTACTTGCTGTCATCTTCTGCAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548154.5
ENST00000550169.5
CDS GCA 72 bp GCACTAGATCTGGCCATTAATATTCTTAGCCTCTGCTaGAGCATCAGGAGTTTAATCATATTTCAAAATACC +
Preference number: 6 (lower is better)
Translates to: ALDLAINILSLC*SIRSLIIFQNT
Trigger: GGTATTTTGAAATATGATTAAACTCCTGATGCTGCAGCAGAGGCTAAGAATATTAATGGCCAGATCTAGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397997.6
ENST00000547219.5
ENST00000548154.5
ENST00000549092.5
ENST00000549921.6
ENST00000550169.5
ENST00000550316.5
ENST00000550389.5
ENST00000550937.5
ENST00000551325.1
CDS GCA 72 bp TACAATTTTGTTCCAAGCTGGTTGACATGCCACAGCTaGATCTTACTTTATGACAAATGGACTGTTTCATCA +
Preference number: 6 (lower is better)
Translates to: YNFVPSWLTCHS*ILLYDKWTVSS
Trigger: TGATGAAACAGTCCATTTGTCATAAAGTAAGATGCAGCTGTGGCATGTCAACCAGCTTGGAACAAAATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000547219.5
ENST00000547414.5
ENST00000548154.5
ENST00000549092.5
ENST00000549921.6
ENST00000550169.5
ENST00000550316.5
ENST00000550937.5
CDS GCA 72 bp GACCTAGATCTGGCCATTAATATTCTTAGCCTCTGCTaGAGCATCAGGAGTTTAATCATATTTCAAAATACC +
Preference number: 6 (lower is better)
Translates to: DLDLAINILSLC*SIRSLIIFQNT
Trigger: GGTATTTTGAAATATGATTAAACTCCTGATGCTGCAGCAGAGGCTAAGAATATTAATGGCCAGATCTAGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547414.5
CDS CAA 72 bp CTAGATTATTATGGTAGCCATTTAGAGATGGGGTCTTaGGTCCTAAATTGTCATCTTCATCCCTACTTAGCT +
Preference number: 6 (lower is better)
Translates to: LDYYGSHLEMGS*VLNCHLHPYLA
Trigger: AGCTAAGTAGGGATGAAGATGACAATTTAGGACCAAAGACCCCATCTCTAAATGGCTACCATAATAATCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397997.6
ENST00000549921.6
ENST00000550389.5
CDS CAA 72 bp ATCTTGCAGAAGATGACAGCAAGTAAACTTGCCTGCTaGATCTTGATGATGGTAGAAAGAAGAAAATCTCCT +
Preference number: 6 (lower is better)
Translates to: ILQKMTASKLAC*ILMMVERRKSP
Trigger: AGGAGATTTTCTTCTTTCTACCATCATCAAGATCAAGCAGGCAAGTTTACTTGCTGTCATCTTCTGCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550937.5
CDS CAA 90 bp CACAGCTGCATCTTACTTTATGACAAATGGACTGTTTCATCACTTTaGCATCTGGGCATCTACTTCTTAATGGTCATTTATGAAGTACCT +
Preference number: 6 (lower is better)
Translates to: HSCILLYDKWTVSSL*HLGIYFLMVIYEVP
Trigger: AGGTACTTCATAAATGACCATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGATGCAGCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547219.5
CDS CAA 90 bp CACAGCTGCATCTTACTTTATGACAAATGGACTGTTTCATCACTTTaGCATCTGGGCATCTACTTCTTAATGGTCATTTCAAAATGTGAC +
Preference number: 6 (lower is better)
Translates to: HSCILLYDKWTVSSL*HLGIYFLMVISKCD
Trigger: GTCACATTTTGAAATGACCATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGATGCAGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550316.5
CDS CAA 72 bp TTTAGTAGTGTTGGTCATAACTCTATCCTGGAGTCATaGTTAATCTTGGTACGTATCTTGCAGAAGATGACA +
Preference number: 6 (lower is better)
Translates to: FSSVGHNSILES*LILVRILQKMT
Trigger: TGTCATCTTCTGCAAGATACGTACCAAGATTAACAATGACTCCAGGATAGAGTTATGACCAACACTACTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550937.5
CDS CAA 90 bp GATTTAACCTTTAGTAGTGTTGGTCATAACTCTATCCTGGAGTCATaGTTAATCTTGGTACGTATCTTGCAGAAGATGACAGCAAGTAAA +
Preference number: 6 (lower is better)
Translates to: DLTFSSVGHNSILES*LILVRILQKMTASK
Trigger: TTTACTTGCTGTCATCTTCTGCAAGATACGTACCAAGATTAACAATGACTCCAGGATAGAGTTATGACCAACACTACTAAAGGTTAAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550937.5
CDS CAA 72 bp ATCTTACTTTATGACAAATGGACTGTTTCATCACTTTaGCATCTGGGCATCTACTTCTTAATGGTCATTTCG +
Preference number: 6 (lower is better)
Translates to: ILLYDKWTVSSL*HLGIYFLMVIS
Trigger: CGAAATGACCATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547414.5
ENST00000548154.5
ENST00000549921.6
ENST00000550937.5
CDS CAA 72 bp ATCTTACTTTATGACAAATGGACTGTTTCATCACTTTaGCATCTGGGCATCTACTTCTTAATGGTCATTTCT +
Preference number: 6 (lower is better)
Translates to: ILLYDKWTVSSL*HLGIYFLMVIS
Trigger: AGAAATGACCATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549092.5
ENST00000550169.5
CDS CAA 72 bp ATCTTACTTTATGACAAATGGACTGTTTCATCACTTTaGCATCTGGGCATCTACTTCTTAATGGTCATTTCA +
Preference number: 6 (lower is better)
Translates to: ILLYDKWTVSSL*HLGIYFLMVIS
Trigger: TGAAATGACCATTAAGAAGTAGATGCCCAGATGCAAAAGTGATGAAACAGTCCATTTGTCATAAAGTAAGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550316.5