RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMPD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170324

Ensembl transcript IDs: ENST00000305531.3, ENST00000374201.8, ENST00000468556.1, ENST00000474573.5, ENST00000477710.1, ENST00000486151.5, ENST00000492045.1, ENST00000505547.1, ENST00000635925.1, ENST00000636244.1, ENST00000637395.1

Found 512 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCTGCCGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTaGTGGTCCTGGGGATCTGCTCCTGGAAGAGCGCGGTTAACAAGG +
Preference number: 1 (lower is better)
Translates to: SAAECTDPELSLRPA*WSWGSAPGRARLTR
Trigger: CCTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCGGCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 90 bp GAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTaGGGATCTGCTCCTGGAAGAGCGCGGTTAACAAGGAGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: ECTDPELSLRPACWS*GSAPGRARLTRRLQ
Trigger: CTGCAGCCTCCTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp TTGTTGGCCATGAGCTGTCTGCTGCCGAGTGCACAGATCCAGAGCTaGGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCTGCTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: LLAMSCLLPSAQIQS*ASGPPAGPGDLLLE
Trigger: TTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCGGCAGCAGACAGCTCATGGCCAACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 90 bp GAGTCCCAGGTCATTGGCTTCTGGATCACACAGGCACTCTTCAGCTaGTCCCGGCCAGTGCAGGGGCTGCGCCCGATGCCTTCTGCTCCA +
Preference number: 1 (lower is better)
Translates to: ESQVIGFWITQALFS*SRPVQGLRPMPSAP
Trigger: TGGAGCAGAAGGCATCGGGCGCAGCCCCTGCACTGGCCGGGAGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 90 bp CCCCACAGTGCAGAGCTGAGCCGGTGCATCTCTGAGACTTCAACCTaGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGCTGGGATG +
Preference number: 1 (lower is better)
Translates to: PHSAELSRCISETST*TRRAVILSIRLAGM
Trigger: CATCCCAGCGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp CCCTCAAGAACTTCAGCTCAGCATCCTCTCCCCACAGTGCAGAGCTaGGCCGGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGG +
Preference number: 1 (lower is better)
Translates to: PSRTSAQHPLPTVQS*AGASLRLQPGPVER
Trigger: CCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGGGAGAGGATGCTGAGCTGAAGTTCTTGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp TGCGCCCGATGCCTTCTGCTCCAGCCTCCTTGCTGCCGTCCACGTTaGAGTTATCCATTGATGTACTCAGCAGGCCTCCTGCAGCACCCT +
Preference number: 1 (lower is better)
Translates to: CARCLLLQPPCCRPR*SYPLMYSAGLLQHP
Trigger: AGGGTGCTGCAGGAGGCCTGCTGAGTACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 90 bp AACTTCAGCTCAGCATCCTCTCCCCACAGTGCAGAGCTGAGCCGGTaGATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTC +
Preference number: 1 (lower is better)
Translates to: NFSSASSPHSAELSR*ISETSTWTRRAVIL
Trigger: GAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGGGAGAGGATGCTGAGCTGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp GCTCCTTCTTTGCAGAAAACCCCTCTGAGAAGGAGTTGTTGGCCATaGGCTGTCTGCTGCCGAGTGCACAGATCCAGAGCTGAGCCTCCG +
Preference number: 1 (lower is better)
Translates to: APSLQKTPLRRSCWP*AVCCRVHRSRAEPP
Trigger: CGGAGGCTCAGCTCTGGATCTGTGCACTCGGCAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCAAAGAAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 90 bp ATGCATGCTCTGAACAGGTGGTCCAGAGAGAGAGTCCCAGGTCATTaGCTTCTGGATCACACAGGCACTCTTCAGCTGCTCCCGGCCAGT +
Preference number: 1 (lower is better)
Translates to: MHALNRWSRERVPGH*LLDHTGTLQLLPAS
Trigger: ACTGGCCGGGAGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTCTCTCTGGACCACCTGTTCAGAGCATGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp TTCTGCTCCAGCCTCCTTGCTGCCGTCCACGTTGAAGTTATCCATTaGTGTACTCAGCAGGCCTCCTGCAGCACCCTGAAGCCTGGATAC +
Preference number: 1 (lower is better)
Translates to: FCSSLLAAVHVEVIH*CTQQASCSTLKPGY
Trigger: GTATCCAGGCTTCAGGGTGCTGCAGGAGGCCTGCTGAGTACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 90 bp AAGACAGCTCCCACTGTTGATTCAACATCACATTTTACCTCCAGGTaGTGCCCGTTCAGCAGGACCACACAGAGGTCCCTGAGAGCCAAA +
Preference number: 1 (lower is better)
Translates to: KTAPTVDSTSHFTSR*CPFSRTTQRSLRAK
Trigger: TTTGGCTCTCAGGGACCTCTGTGTGGTCCTGCTGAACGGGCAGCACCTGGAGGTAAAATGTGATGTTGAATCAACAGTGGGAGCTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 90 bp ACATGGGAAGGCTGCCCAGAGCCCATCTGTGCATTAAACCCATGCTaGGCTGAGCAGAGGTCCAGTAAGTATTTACTGGTCTTGGCTGAA +
Preference number: 1 (lower is better)
Translates to: TWEGCPEPICALNPC*AEQRSSKYLLVLAE
Trigger: TTCAGCCAAGACCAGTAAATACTTACTGGACCTCTGCTCAGCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGGCAGCCTTCCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 90 bp AAAACATGGGAAGGCTGCCCAGAGCCCATCTGTGCATTAAACCCATaGTGGGCTGAGCAGAGGTCCAGTAAGTATTTACTGGTCTTGGCT +
Preference number: 1 (lower is better)
Translates to: KTWEGCPEPICALNP*WAEQRSSKYLLVLA
Trigger: AGCCAAGACCAGTAAATACTTACTGGACCTCTGCTCAGCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGGCAGCCTTCCCATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp AACTTTATCCTCAGGAAGAGTGTGAAGGTATTCATGGAGGTCTTCTaGGGCTGCTCTCTCCAGCCTTCAGGAGCTATTTTGCACAATCTG +
Preference number: 1 (lower is better)
Translates to: NFILRKSVKVFMEVF*GCSLQPSGAILHNL
Trigger: CAGATTGTGCAAAATAGCTCCTGAAGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAATACCTTCACACTCTTCCTGAGGATAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp TTGAAGTTATCCATTGATGTACTCAGCAGGCCTCCTGCAGCACCCTaGAGCCTGGATACAAACAACTCGTTTTCTGAGCATGACAATCTC +
Preference number: 1 (lower is better)
Translates to: LKLSIDVLSRPPAAP*SLDTNNSFSEHDNL
Trigger: GAGATTGTCATGCTCAGAAAACGAGTTGTTTGTATCCAGGCTTCAGGGTGCTGCAGGAGGCCTGCTGAGTACATCAATGGATAACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp ATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTaGTTCAGGGCTAGTATCTGCCCTCCTGGTTTGATCGTTTTTGCT +
Preference number: 1 (lower is better)
Translates to: IILTAMLNVKPSRLM*FRASICPPGLIVFA
Trigger: AGCAAAAACGATCAAACCAGGAGGGCAGATACTAGCCCTGAATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 90 bp TCCAGGTATAATAGAAGATATAAAAATGCCAGGGTCAGCTTGGCCTaGATACTCTCCCTCATTAATGACAAACCCAAAACCACGATGTGG +
Preference number: 1 (lower is better)
Translates to: SRYNRRYKNARVSLA*ILSLINDKPKTTMW
Trigger: CCACATCGTGGTTTTGGGTTTGTCATTAATGAGGGAGAGTATTCAGGCCAAGCTGACCCTGGCATTTTTATATCTTCTATTATACCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCGAACCGACTGCAACGTaGACCGCCTGTGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: RVHRSRAEPPARLLVLGIEPTAT*TACEAG
Trigger: ACCAGCCTCACAGGCGGTGCACGTTGCAGTCGGTTC...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCACCAGCCTTCTGATGTaGAGACCAGCAGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: RVHRSRAEPPARLLVLGITSLLM*RPAGAG
Trigger: CCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGT...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 90 bp CGGCCAGTGCAGGGGCTGCGCCCGATGCCTTCTGCTCCAGCCTCCTaGCTGCCGTCCACGTTGAAGTTATCCATTGATGTACTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: RPVQGLRPMPSAPAS*LPSTLKLSIDVLSR
Trigger: CCTGCTGAGTACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCTGCACTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCGGCCCGCCTGCTaGTCCTGGGGATCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: SVIGASPANRMNSGLENLLRPAC*SWGSAP
Trigger: AGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAG...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 90 bp CTGCGCCCGATGCCTTCTGCTCCAGCCTCCTTGCTGCCGTCCACGTaGAAGTTATCCATTGATGTACTCAGCAGGCCTCCTGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: LRPMPSAPASLLPST*KLSIDVLSRPPAAP
Trigger: GGGTGCTGCAGGAGGCCTGCTGAGTACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCCGCTGGGCTCTCGCTaGTTGTCCCACGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: SVIGASPANRMNSGLENLPLGSR*LSHAAS
Trigger: AGAGGCTGCGTGGGACAAGCAGCGAGAGCCCAGCGG...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCTCTCCACCTCAGAAATaGTACCCAGAACCAAGCCAA +
Preference number: 2 (lower is better)
Translates to: RVHRSRAEPPARLLVLGISPPQK*YPEPSQ
Trigger: TTGGCTTGGTTCTGGGTACCATTTCTGAGGTGGAGA...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCGCACAGATCCAGAGCTaGGCCTCCGGCCCGCCTGCT +
Preference number: 2 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVAQIQS*ASGPPA
Trigger: AGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGC...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCAGCCTCCGGCCCGCCTaGTGGTCCTGGGGATCTGCT +
Preference number: 2 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVSLRPA*WSWGSA
Trigger: AGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCT...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATCTGTCTGCTGCCGAGTaGACAGATCCAGAGCTGAGC +
Preference number: 2 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHLSAAE*TDPELS
Trigger: GCTCAGCTCTGGATCTGTGCACTCGGCAGCAGACAG...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGCTGCTCCCGGCCAGTaGAGGGGCTGCGCCCGATGC +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVIAAPGQ*RGCARC
Trigger: GCATCGGGCGCAGCCCCTGCACTGGCCGGGAGCAGC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATACAAGGAGGCTGCAGTaGCTGTGTGTCAAGGTGCTC +
Preference number: 2 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHTRRLQ*LCVKVL
Trigger: GAGCACCTTGACACACAGTCACTGCAGCCTCCTTGT...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGAGGAGTTGTTGGCCATaGGCTGTCTGCTGCCGAGTG +
Preference number: 2 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSRSCWP*AVCCRV
Trigger: CACTCGGCAGCAGACAGCTCATGGCCAACAACTCCT...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATTTCATGGAGGTCTTCTaGGGCTGCTCTCTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHFMEVF*GCSLQP
Trigger: AGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAA...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATCCACACAGAGGTCCCTaGGAGCCAAATAGGATTTCC +
Preference number: 2 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHPHRGP*EPNRIS
Trigger: GGAAATCCTATTTGGCTCTCAGGGACCTCTGTGTGG...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATAGGATGTCACGGCATTaGAGACAGCTCCCACTGTTG +
Preference number: 2 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHRMSRH*RQLPLL
Trigger: CAACAGTGGGAGCTGTCTTCAATGCCGTGACATCCT...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTACACTCCGGGGCCTGTaGCGCTGGGCTCTCGCTGCT +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVITLRGL*RWALAA
Trigger: AGCAGCGAGAGCCCAGCGGCACAGGCCCCGGAGTGT...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGGAAACTCTGCAAGGATaGAGACACTCCGGGGCCTGT +
Preference number: 2 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSETLQG*RHSGAC
Trigger: ACAGGCCCCGGAGTGTCTGCATCCTTGCAGAGTTTC...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGGCTCTGGTGAGCTCTaGGTCTCCGTGCTTCTTTCT +
Preference number: 2 (lower is better)
Translates to: GASLRLQPGPVERSSSRSGSGEL*VSVLLS
Trigger: AGAAAGAAGCACGGAGACCCAGAGCTCACCAGAGCC...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTAGCCAACCAGCCTTCTaGTGTGGAGACCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGSQPAF*CGDQQG
Trigger: CCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGCT...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTAGGGGCTGCGCCCGATaGCTTCTGCTCCAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVIRGCAR*LLLQPP
Trigger: AGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCT...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGAGACCAGCAGGGGCTaGGTAGACAGACACTTCTTT +
Preference number: 2 (lower is better)
Translates to: GASLRLQPGPVERSSSRSETSRG*VDRHFF
Trigger: AAAGAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTC...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCGCAGAGCTGAGCCGGTaGATCTCTGAGACTTCAACC +
Preference number: 2 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVAELSR*ISETST
Trigger: GGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGC...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGCAGCCCATAGTGGCTaGCAAAGAACTTTATCCTCA +
Preference number: 2 (lower is better)
Translates to: GASLRLQPGPVERSSSRSAAHSG*QRTLSS
Trigger: TGAGGATAAAGTTCTTTGTCAGCCACTATGGGCTGC...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCAGCTCTGGGTCTCCGTaGTTCTTTCTGAAACTCTGC +
Preference number: 2 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVSSGSP*FFLKLC
Trigger: GCAGAGTTTCAGAAAGAAGCACGGAGACCCAGAGCT...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGTCAAGGTGCTCCAATaGGGCTCTGGTGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVIVKVLQ*GSGELW
Trigger: CCAGAGCTCACCAGAGCCCCATTGGAGCACCTTGAC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCATTCAACGTGAAAGTATaGCTTACTCTCCACCTGCTC +
Preference number: 2 (lower is better)
Translates to: GASLRLQPGPVERSSSRSFNVKV*LTLHLL
Trigger: GAGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAA...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACACCTCCTGCAGCACCCTaGAGCCTGGATACAAACAAC +
Preference number: 2 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTPPAAP*SLDTNN
Trigger: GTTGTTTGTATCCAGGCTTCAGGGTGCTGCAGGAGG...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGACTGTGTGTCAAGGTaGTCCAATGGGGCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVIDCVSR*SNGALV
Trigger: CACCAGAGCCCCATTGGAGCACCTTGACACACAGTC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCTGGGGATCTGCTCCTaGAAGAGCGCGGTTAACAAG +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVILGICS*KSAVNK
Trigger: CTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCCAACAGGATGAACTCTaGCCTGGAAAACTTGCTCCT +
Preference number: 2 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVQQDEL*PGKLAP
Trigger: AGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTG...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACACAGCACACCGTATTCTaGGAGCTGCTGAGTGACCCT +
Preference number: 2 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTQHTVF*ELLSDP
Trigger: AGGGTCACTCAGCAGCTCCCAGAATACGGTGTGCTG...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp TCTGCTGTTGTTTTTCACTTCATAGACTATGACACCCTTGGCACAGATCCCCAGCTCCAGCCAACAGGATaGACTCTGGCCTGGAAAACT +
Preference number: 2 (lower is better)
Translates to: SAVVFHFIDYDTLGTDPQLQPTG*TLAWKT
Trigger: AGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAG...CTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGCTTCAGGAGCTATTTTaGACAATCTGGTTTCACTGT +
Preference number: 2 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSLQELF*TIWFHC
Trigger: ACAGTGAAACCAGATTGTGCAAAATAGCTCCTGAAG...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp TCTGCTGTTGTTTTTCACTTCATAGACTATGACACCCTTGGCACAGATCCCCAGCTCCGTGCTTCTTTCTaGAACTCTGCAAGGATGCAG +
Preference number: 2 (lower is better)
Translates to: SAVVFHFIDYDTLGTDPQLRASF*NSARMQ
Trigger: CTGCATCCTTGCAGAGTTTCAGAAAGAAGCACGGAG...CTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR TCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACATATTCTGGGAGCTGCTaGGTGACCCTCAAGAACTTC +
Preference number: 2 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTYSGSC*VTLKNF
Trigger: GAAGTTCTTGAGGGTCACTCAGCAGCTCCCAGAATA...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTCTGGGTTCCTGGTATaGGGTAAGTTTTTAGTAAAT +
Preference number: 2 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSGFLV*GKFLVN
Trigger: ATTTACTAAAAACTTACCCCATACCAGGAACCCAGA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR-3UTR CCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGCTATTTTGCACAATCTaGTTTCACTGTCCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSLFCTI*FHCPGK
Trigger: TTTTCCTGGACAGTGAAACCAGATTGTGCAAAATAG...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGCAGTATCTCTTCATTaGAGTACAGCCTCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVIAVSLH*STASPP
Trigger: TGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTTTCTTTCTGAAACTCTaGAAGGATGCAGACACTCCG +
Preference number: 2 (lower is better)
Translates to: LDHPNSHVECEALQTDVIFFLKL*KDADTP
Trigger: CGGAGTGTCTGCATCCTTGCAGAGTTTCAGAAAGAA...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 90 bp ATCCAAATGAGAGGCTTAGACCGGGCCTGGTGTGCAGGACTCAAATaGGCCATTTGCACAAACTTATCATGGTCAAATAAAACATGGGAA +
Preference number: 2 (lower is better)
Translates to: IQMRGLDRAWCAGLK*AICTNLSWSNKTWE
Trigger: TTCCCATGTTTTATTTGACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCTCATTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 90 bp GTTCTAAGACAGACTCGTCACATGGCAAGCAGAGTCGGTCAGACTTaGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTT +
Preference number: 2 (lower is better)
Translates to: VLRQTRHMASRVGQT*DKFIDFFGTSVFSF
Trigger: AAATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGCTTGCCATGTGACGAGTCTGTCTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTGGGTTCCTGGTATaGGGTAAGTTTTTAGTAAAT +
Preference number: 2 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFSGFLV*GKFLVN
Trigger: ATTTACTAAAAACTTACCCCATACCAGGAACCCAGA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR GCA 72 bp GCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCTaGTCCTGGAAGAGCGCGGTTAACAAGGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: AEPPARLLVLGI*SWKSAVNKEAA
Trigger: TGCAGCCTCCTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp CTCCCGGCCAGTGCAGGGGCTGCGCCCGATGCCTTCTaGTCCAGCCTCCTTGCTGCCGTCCACGTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: LPASAGAAPDAF*SSLLAAVHVEV
Trigger: AACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCTGCACTGGCCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp TCTGCAAGGATGCAGACACTCCGGGGCCTGTGCCGCTaGGCTCTCGCTGCTTGTCCCACGCAGCCTCTTCCT +
Preference number: 3 (lower is better)
Translates to: SARMQTLRGLCR*ALAACPTQPLP
Trigger: AGGAAGAGGCTGCGTGGGACAAGCAGCGAGAGCCCAGCGGCACAGGCCCCGGAGTGTCTGCATCCTTGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp GATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTaGGGATCTGCTCCTGGAAGAGCGCGGTTAACAAGG +
Preference number: 3 (lower is better)
Translates to: DPELSLRPACWS*GSAPGRARLTR
Trigger: CCTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp GAAGGAGTTGTTGGCCATGAGCTGTCTGCTGCCGAGTaGACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGC +
Preference number: 3 (lower is better)
Translates to: EGVVGHELSAAE*TDPELSLRPAC
Trigger: GCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCGGCAGCAGACAGCTCATGGCCAACAACTCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp GTCATTGGCTTCTGGATCACACAGGCACTCTTCAGCTaGTCCCGGCCAGTGCAGGGGCTGCGCCCGATGCCT +
Preference number: 3 (lower is better)
Translates to: VIGFWITQALFS*SRPVQGLRPMP
Trigger: AGGCATCGGGCGCAGCCCCTGCACTGGCCGGGAGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp GGTGGTCCAGAGAGAGAGTCCCAGGTCATTGGCTTCTaGATCACACAGGCACTCTTCAGCTGCTCCCGGCCA +
Preference number: 3 (lower is better)
Translates to: GGPERESQVIGF*ITQALFSCSRP
Trigger: TGGCCGGGAGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTCTCTCTGGACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp GCTCCTGGAAGAGCGCGGTTAACAAGGAGGCTGCAGTaGCTGTGTGTCAAGGTGCTCCAATGGGGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: APGRARLTRRLQ*LCVKVLQWGSG
Trigger: ACCAGAGCCCCATTGGAGCACCTTGACACACAGTCACTGCAGCCTCCTTGTTAACCGCGCTCTTCCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp GCAGAGCTGAGCCGGTGCATCTCTGAGACTTCAACCTaGACCCGTAGAGCGGTCATCCTCTCGATCAGACTC +
Preference number: 3 (lower is better)
Translates to: AELSRCISETST*TRRAVILSIRL
Trigger: GAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATCCCTCTGAGAAGGAGTaGTTGGCCATGAGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHPSEKE*LAMSCL
Trigger: CAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGG...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATTCTGAGAAGGAGTTGTaGGCCATGAGCTGTCTGCTG +
Preference number: 3 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHSEKEL*AMSCLL
Trigger: CAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGA...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp GGCTTGCCAGAGGGCACAGCATTGCAAGCAGGGCAATaGCCCAGTTCTAAGACAGACTCGTCACATGGCAAG +
Preference number: 3 (lower is better)
Translates to: GLPEGTALQAGQ*PSSKTDSSHGK
Trigger: CTTGCCATGTGACGAGTCTGTCTTAGAACTGGGTCATTGCCCTGCTTGCAATGCTGTGCCCTCTGGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR TCA 72 bp AGCCTCCTTGCTGCCGTCCACGTTGAAGTTATCCATTaGTGTACTCAGCAGGCCTCCTGCAGCACCCTGAAG +
Preference number: 3 (lower is better)
Translates to: SLLAAVHVEVIH*CTQQASCSTLK
Trigger: CTTCAGGGTGCTGCAGGAGGCCTGCTGAGTACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp TGCCTTCTGCTCCAGCCTCCTTGCTGCCGTCCACGTTaGAGTTATCCATTGATGTACTCAGCAGGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: CLLLQPPCCRPR*SYPLMYSAGLL
Trigger: CAGGAGGCCTGCTGAGTACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp CTGAACAGGTGGTCCAGAGAGAGAGTCCCAGGTCATTaGCTTCTGGATCACACAGGCACTCTTCAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: LNRWSRERVPGH*LLDHTGTLQLL
Trigger: GAGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTCTCTCTGGACCACCTGTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATAAGGATGTCACGGCATaGAAGACAGCTCCCACTGTT +
Preference number: 3 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHKDVTA*KTAPTV
Trigger: AACAGTGGGAGCTGTCTTCAATGCCGTGACATCCTT...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp CCCACTGTTGATTCAACATCACATTTTACCTCCAGGTaGTGCCCGTTCAGCAGGACCACACAGAGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PTVDSTSHFTSR*CPFSRTTQRSL
Trigger: CAGGGACCTCTGTGTGGTCCTGCTGAACGGGCAGCACCTGGAGGTAAAATGTGATGTTGAATCAACAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp TGTGTCAAGGTGCTCCAATGGGGCTCTGGTGAGCTCTaGGTCTCCGTGCTTCTTTCTGAAACTCTGCAAGGA +
Preference number: 3 (lower is better)
Translates to: CVKVLQWGSGEL*VSVLLSETLQG
Trigger: TCCTTGCAGAGTTTCAGAAAGAAGCACGGAGACCCAGAGCTCACCAGAGCCCCATTGGAGCACCTTGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp GGCTGCCCAGAGCCCATCTGTGCATTAAACCCATGCTaGGCTGAGCAGAGGTCCAGTAAGTATTTACTGGTC +
Preference number: 3 (lower is better)
Translates to: GCPEPICALNPC*AEQRSSKYLLV
Trigger: GACCAGTAAATACTTACTGGACCTCTGCTCAGCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCGGTAAAACTGGTGCCTaGTCAGGCTGTGCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVGKTGA*SGCAGA
Trigger: TGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACC...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAAGCAGTATCTCTTCATaGCAGTACAGCCTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: GASLRLQPGPVERSSSRSSSISS*QYSLSS
Trigger: GGAGGAGAGGCTGTACTGCAATGAAGAGATACTGCT...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp GATGTAGTGTCATCGGGGCCTCTCCAGCCAACAGGATaGACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCA +
Preference number: 3 (lower is better)
Translates to: DVVSSGPLQPTG*TLAWKTCSFFA
Trigger: TGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp AGGCAAGGACCCCCAGCTGCAGCAGTATCTCTTCATTaGAGTACAGCCTCTCCTCCAGGATATCTTTCCGAA +
Preference number: 3 (lower is better)
Translates to: RQGPPAAAVSLH*STASPPGYLSE
Trigger: TTCGGAAAGATATCCTGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGCTGCAGCTGGGGGTCCTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp GAAGGCTGCCCAGAGCCCATCTGTGCATTAAACCCATaGTGGGCTGAGCAGAGGTCCAGTAAGTATTTACTG +
Preference number: 3 (lower is better)
Translates to: EGCPEPICALNP*WAEQRSSKYLL
Trigger: CAGTAAATACTTACTGGACCTCTGCTCAGCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGGCAGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATAAACTTGCTCCTTCTTaGCAGAAAACCCCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHKLAPS*QKTPLR
Trigger: TCTCAGAGGGGTTTTCTGCAAAGAAGGAGCAAGTTT...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp ACTGTTGATTCAACATCACATTTTACCTCCAGGTGCTaGCCGTTCAGCAGGACCACACAGAGGTCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: TVDSTSHFTSRC*PFSRTTQRSLR
Trigger: TCTCAGGGACCTCTGTGTGGTCCTGCTGAACGGGCAGCACCTGGAGGTAAAATGTGATGTTGAATCAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGAGAGTCCCAGGTCATaGGCTTCTGGATCACACAGG +
Preference number: 3 (lower is better)
Translates to: LDHPNSHVECEALQTDVIESPRS*ASGSHR
Trigger: CCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp CTCAGGAAGAGTGTGAAGGTATTCATGGAGGTCTTCTaGGGCTGCTCTCTCCAGCCTTCAGGAGCTATTTTG +
Preference number: 3 (lower is better)
Translates to: LRKSVKVFMEVF*GCSLQPSGAIL
Trigger: CAAAATAGCTCCTGAAGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAATACCTTCACACTCTTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp ACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTaGTTCAGGGCTAGTATCTGCCCTCCTGGTTTGATC +
Preference number: 3 (lower is better)
Translates to: TAMLNVKPSRLM*FRASICPPGLI
Trigger: GATCAAACCAGGAGGGCAGATACTAGCCCTGAATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp ATGTACTCAGCAGGCCTCCTGCAGCACCCTGAAGCCTaGATACAAACAACTCGTTTTCTGAGCATGACAATC +
Preference number: 3 (lower is better)
Translates to: MYSAGLLQHPEA*IQTTRFLSMTI
Trigger: GATTGTCATGCTCAGAAAACGAGTTGTTTGTATCCAGGCTTCAGGGTGCTGCAGGAGGCCTGCTGAGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGAGACAGCTCCCACTGTaGATTCAACATCACATTTTA +
Preference number: 3 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSRQLPL*IQHHIL
Trigger: TAAAATGTGATGTTGAATCAACAGTGGGAGCTGTCT...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp CTGAATCCAAATGAGAGGCTTAGACCGGGCCTGGTGTaGAGGACTCAAATTGGCCATTTGCACAAACTTATC +
Preference number: 3 (lower is better)
Translates to: LNPNERLRPGLV*RTQIGHLHKLI
Trigger: GATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCTCATTTGGATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp CAGACTCGCTGGGATGTAATCTTCAACGTGAAAGTATaGCTTACTCTCCACCTGCTCCTTAGGGTAATTGCC +
Preference number: 3 (lower is better)
Translates to: QTRWDVIFNVKV*LTLHLLLRVIA
Trigger: GGCAATTACCCTAAGGAGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp ACTCTTTGCTTTTCATATACGCCAAGCCAAAGTAGGTaGGTTCCTCGAGGTTGGCAAAGGATGTCACGGCAT +
Preference number: 3 (lower is better)
Translates to: TLCFSYTPSQSR*VPRGWQRMSRH
Trigger: ATGCCGTGACATCCTTTGCCAACCTCGAGGAACTCACCTACTTTGGCTTGGCGTATATGAAAAGCAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp TCTGAGGCTGCTCTCTCCAGCCTTCAGGAGCTATTTTaGACAATCTGGTTTCACTGTCCAGGAAAAAGAACT +
Preference number: 3 (lower is better)
Translates to: SEAALSSLQELF*TIWFHCPGKRT
Trigger: AGTTCTTTTTCCTGGACAGTGAAACCAGATTGTGCAAAATAGCTCCTGAAGGCTGGAGAGAGCAGCCTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp TCTGCTGTTGTTTTTCACTTCATAGACTATGACACCCTTGGCACAGATCCCCAGTCTGGCCTGGAAAACTaGCTCCTTCTTTGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: SAVVFHFIDYDTLGTDPQSGLEN*LLLCRK
Trigger: TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGA...CTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR TCA 72 bp GATACAAACAACTCGTTTTCTGAGCATGACAATCTCTaGATCCAAATGAGAGGCTTAGACCGGGCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: DTNNSFSEHDNL*IQMRGLDRAWC
Trigger: ACACCAGGCCCGGTCTAAGCCTCTCATTTGGATTCAGAGATTGTCATGCTCAGAAAACGAGTTGTTTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp ACAAACTTATCATGGTCAAATAAAACATGGGAAGGCTaGCCAGAGCCCATCTGTGCATTAAACCCATGCTGG +
Preference number: 3 (lower is better)
Translates to: TNLSWSNKTWEG*PEPICALNPCW
Trigger: CCAGCATGGGTTTAATGCACAGATGGGCTCTGGGCAGCCTTCCCATGTTTTATTTGACCATGATAAGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR GCA 72 bp GACCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTaGACAAACTTATCATGGTCAAATAAAACATGGGAA +
Preference number: 3 (lower is better)
Translates to: DRAWCAGLKLAI*TNLSWSNKTWE
Trigger: TTCCCATGTTTTATTTGACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp CTCTCCCTCATTAATGACAAACCCAAAACCACGATGTaGGTCACGTTTCAGTGTCACACGTACAATTTCTCG +
Preference number: 3 (lower is better)
Translates to: LSLINDKPKTTM*VTFQCHTYNFS
Trigger: CGAGAAATTGTACGTGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTTGTGCAGGACTCAAATaGGCCATTTGCACAAACTTA +
Preference number: 3 (lower is better)
Translates to: LDHPNSHVECEALQTDVICAGLK*AICTNL
Trigger: TAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACA...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CCA 72 bp AGACTCGTCACATGGCAAGCAGAGTCGGTCAGACTTTaGACAAGTTTATTGACTTCTTTGGAACCTCAGTTT +
Preference number: 3 (lower is better)
Translates to: RLVTWQAESVRL*TSLLTSLEPQF
Trigger: AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGCTTGCCATGTGACGAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR TCA 72 bp AATAGAAGATATAAAAATGCCAGGGTCAGCTTGGCCTaGATACTCTCCCTCATTAATGACAAACCCAAAACC +
Preference number: 3 (lower is better)
Translates to: NRRYKNARVSLA*ILSLINDKPKT
Trigger: GGTTTTGGGTTTGTCATTAATGAGGGAGAGTATTCAGGCCAAGCTGACCCTGGCATTTTTATATCTTCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAAGCGTCTAGGATTATaGGGACACGTAAATTACATA +
Preference number: 3 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFKRLGL*GHVNYI
Trigger: TATGTAATTTACGTGTCCCAATAATCCTAGACGCTT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR-3UTR CAA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATAAGCGTCTAGGATTATaGGGACACGTAAATTACATA +
Preference number: 3 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHKRLGL*GHVNYI
Trigger: TATGTAATTTACGTGTCCCAATAATCCTAGACGCTT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCCTCCGGCCCGCCTGCTaGTCCTGGGGATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFLRPAC*SWGSAP
Trigger: AGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAG...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCCTCCAGCCAACAGGATaGACTCTGGCCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: RVHRSRAEPPARLLVLGILQPTG*TLAWKT
Trigger: AGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAG...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATACACTCCGGGGCCTGTaGCGCTGGGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHTLRGL*RWALAA
Trigger: AGCAGCGAGAGCCCAGCGGCACAGGCCCCGGAGTGT...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCAAATGCAGCACCTCCTaGAAGATGAGGCCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: RVHRSRAEPPARLLVLGIKCSTS*KMRPSV
Trigger: CACGGAAGGCCTCATCTTCCAGGAGGTGCTGCATTT...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGACACTCCGGGGCCTGTaGCGCTGGGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRTLRGL*RWALAA
Trigger: AGCAGCGAGAGCCCAGCGGCACAGGCCCCGGAGTGT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCGCTGCTCCCGGCCAGTaGAGGGGCTGCGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVAAPGQ*RGCARC
Trigger: GCATCGGGCGCAGCCCCTGCACTGGCCGGGAGCAGC...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGAGGGGCTCGCAGAGCTaGAGGGGCGTTGCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SVIGASPANRMNSGLENLRGSQS*RGVAEV
Trigger: GACCTCCGCAACGCCCCTGCAGCTCTGCGAGCCCCT...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCTCCGGCCCGCCTGCTaGTCCTGGGGATCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLRPAC*SWGSAP
Trigger: AGGAGCAGATCCCCAGGACCAGCAGGCGGGCCGGAG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGAGGGGCTGCGCCCGATaGCTTCTGCTCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRRGCAR*LLLQPP
Trigger: AGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGAGGGGCTGCGCCCGATaGCTTCTGCTCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSRGCAR*LLLQPP
Trigger: AGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCT...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAACAGAGCTTCACCCCTaGCCTGTAGGGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSTELHP*PVGRWP
Trigger: TGGCCAGCGCCCTACAGGTCAGGGGTGAAGCTCTGT...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCACCAATGGGGCTCTGGTaGGCTCTGGGTCTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSPMGLW*ALGLRA
Trigger: AGCACGGAGACCCAGAGCTCACCAGAGCCCCATTGG...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGAGCCAACCAGCCTTCTaGTGTGGAGACCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSQPAF*CGDQQG
Trigger: CCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGCT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTAGCCTCCGGCCCGCCTaGTGGTCCTGGGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGSLRPA*WSWGSA
Trigger: AGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCT...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCCAGGCACTCTTCAGCTaGTCCCGGCCAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVQALFS*SRPVQG
Trigger: CCCCTGCACTGGCCGGGAGCAGCTGAAGAGTGCCTG...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGACCAGTCTTGCAACCTaGCCAGGACCCGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRTSLAT*PGPVRH
Trigger: GTGCCTGACGGGTCCTGGGCAGGTTGCAAGACTGGT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAACCAGTCTTGCAACCTaGCCAGGACCCGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSTSLAT*PGPVRH
Trigger: GTGCCTGACGGGTCCTGGGCAGGTTGCAAGACTGGT...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTGTCCGCGGAGCTCCCTaGCACCAGCACTGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGVRGAP*HQHCCR
Trigger: GCGGCAACAGTGCTGGTGGCAGGGAGCTCCGCGGAC...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAACGGGGCCTGTGCCGCTaGGCTCTCGCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PANRMNSGLENLLLLCRKRGLCR*ALAACP
Trigger: GGGACAAGCAGCGAGAGCCCAGCGGCACAGGCCCCG...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCGGCTCTGGTGAGCTCTaGGTCTCCGTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFGSGEL*VSVLLS
Trigger: AGAAAGAAGCACGGAGACCCAGAGCTCACCAGAGCC...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCCAGCACACCGTATTCTaGGAGCTGCTGAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFQHTVF*ELLSDP
Trigger: AGGGTCACTCAGCAGCTCCCAGAATACGGTGTGCTG...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 72 bp CAGGGGCTGCGCCCGATGCCTTCTGCTCCAGCCTCCTaGCTGCCGTCCACGTTGAAGTTATCCATTGATGTA +
Preference number: 4 (lower is better)
Translates to: QGLRPMPSAPAS*LPSTLKLSIDV
Trigger: TACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATGAAACTCTGCAAGGATaGAGACACTCCGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHETLQG*RHSGAC
Trigger: ACAGGCCCCGGAGTGTCTGCATCCTTGCAGAGTTTC...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCACTGTCTGCTGCCGAGTaGACAGATCCAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSLSAAE*TDPELS
Trigger: GCTCAGCTCTGGATCTGTGCACTCGGCAGCAGACAG...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATGGCTTAGACCGGGCCTaGTGTGCAGGACTCAAATTG +
Preference number: 4 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHGLDRA*CAGLKL
Trigger: CAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCC...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCAGCCAACCAGCCTTCTaGTGTGGAGACCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVSQPAF*CGDQQG
Trigger: CCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGCT...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCTGCAGAAAACCCCTCTaGGAAGGAGTTGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFCRKPL*EGVVGH
Trigger: ATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCA...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCTGGGAGCTGCTGAGTaGCCCTCAAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLGAAE*PSRTSA
Trigger: AGCTGAAGTTCTTGAGGGTCACTCAGCAGCTCCCAG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCACTGGGAGCTGCTGAGTaGCCCTCAAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSLGAAE*PSRTSA
Trigger: AGCTGAAGTTCTTGAGGGTCACTCAGCAGCTCCCAG...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCATCCAAAAGTCTCCGTaGCCAGGTCTAGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFIQKSP*PGLGLH
Trigger: ATGAAGGCCTAGACCTGGTCACGGAGACTTTTGGAT...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGGAAACTCTGCAAGGATaGAGACACTCCGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRETLQG*RHSGAC
Trigger: ACAGGCCCCGGAGTGTCTGCATCCTTGCAGAGTTTC...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGGACTGTGTGTCAAGGTaGTCCAATGGGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SVIGASPANRMNSGLENLDCVSR*SNGALV
Trigger: CACCAGAGCCCCATTGGAGCACCTTGACACACAGTC...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCGGAAAAAGAACTCTTTaGTTTTCATATACGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RVHRSRAEPPARLLVLGIGKRTL*FSYTPS
Trigger: GCTTGGCGTATATGAAAAGCAAAGAGTTCTTTTTCC...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTGCGCCCGATGCCTTCTaGTCCAGCCTCCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAAPDAF*SSLLAA
Trigger: GGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGC...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGGGCTCTGGTGAGCTCTaGGTCTCCGTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRGSGEL*VSVLLS
Trigger: AGAAAGAAGCACGGAGACCCAGAGCTCACCAGAGCC...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCCTATTTTGCACAATCTaGTTTCACTGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RVHRSRAEPPARLLVLGILFCTI*FHCPGK
Trigger: TTTTCCTGGACAGTGAAACCAGATTGTGCAAAATAG...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGGGCTTAGACCGGGCCTaGTGTGCAGGACTCAAATTG +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRGLDRA*CAGLKL
Trigger: CAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCC...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCTCCAGCCAACAGGATaGACTCTGGCCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLQPTG*TLAWKT
Trigger: AGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCCACACAGAGGTCCCTaGGAGCCAAATAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRPHRGP*EPNRIS
Trigger: GGAAATCCTATTTGGCTCTCAGGGACCTCTGTGTGG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAAGGATGTCACGGCATTaGAGACAGCTCCCACTGTTG +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSRMSRH*RQLPLL
Trigger: CAACAGTGGGAGCTGTCTTCAATGCCGTGACATCCT...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCCAAGCCAAAGTAGGTaGGTTCCTCGAGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRPSQSR*VPRGWQ
Trigger: TTGCCAACCTCGAGGAACTCACCTACTTTGGCTTGG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCCCTCCAGACTGATGTaGTTCAGGGCTAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRPSRLM*FRASIC
Trigger: GCAGATACTAGCCCTGAATCACATCAGTCTGGAGGG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCCGCTGGGCTCTCGCTaGTTGTCCCACGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIPLGSR*LSHAAS
Trigger: AGAGGCTGCGTGGGACAAGCAGCGAGAGCCCAGCGG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTGTGCATTAAACCCATaGTGGGCTGAGCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRCALNP*WAEQRS
Trigger: GGACCTCTGCTCAGCCCAGCATGGGTTTAATGCACA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGCTGCTCCCGGCCAGTaGAGGGGCTGCGCCCGATGC +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFAAPGQ*RGCARC
Trigger: GCATCGGGCGCAGCCCCTGCACTGGCCGGGAGCAGC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTTGAGCCTGCATGCATaGTCTGAACAGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLSLHA*SEQVVQ
Trigger: CTGGACCACCTGTTCAGAGCATGCATGCAGGCTCAA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGTTGAGCCTGCATGCATaGTCTGAACAGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SVIGASPANRMNSGLENLLSLHA*SEQVVQ
Trigger: CTGGACCACCTGTTCAGAGCATGCATGCAGGCTCAA...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCGGGGCCTGTGCCGCTaGGCTCTCGCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFRGLCR*ALAACP
Trigger: GGGACAAGCAGCGAGAGCCCAGCGGCACAGGCCCCG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTCTGAGACTTCAACCTaGACCCGTAGAGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSETST*TRRAVI
Trigger: GATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGTCTGAGACTTCAACCTaGACCCGTAGAGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSSETST*TRRAVI
Trigger: GATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGA...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGAGAGTCCCAGGTCATTaGCTTCTGGATCACACAGGC +
Preference number: 4 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSRVPGH*LLDHTG
Trigger: GCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCT...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 72 bp TGCTCCTTCTTTGCAGAAAACCCCTCTGAGAAGGAGTaGTTGGCCATGAGCTGTCTGCTGCCGAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: CSFFAENPSEKE*LAMSCLLPSAQ
Trigger: CTGTGCACTCGGCAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCAAAGAAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 72 bp ATGCCTTCTGCTCCAGCCTCCTTGCTGCCGTCCACGTaGAAGTTATCCATTGATGTACTCAGCAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: MPSAPASLLPST*KLSIDVLSRPP
Trigger: AGGAGGCCTGCTGAGTACATCAATGGATAACTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGAAGGCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 72 bp TCTGAACAGGTGGTCCAGAGAGAGAGTCCCAGGTCATaGGCTTCTGGATCACACAGGCACTCTTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SEQVVQRESPRS*ASGSHRHSSAA
Trigger: AGCAGCTGAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTCTCTCTGGACCACCTGTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTAACGTGCACCGCCTGTaGGGCTGGTCTTCACACATG +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGNVHRL*GWSSHM
Trigger: CATGTGTGAAGACCAGCCTCACAGGCGGTGCACGTT...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCTCCGTGCTTCTTTCTaGAACTCTGCAAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLRASF*NSARMQ
Trigger: CTGCATCCTTGCAGAGTTTCAGAAAGAAGCACGGAG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGCACAGATCCAGAGCTaGGCCTCCGGCCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFAQIQS*ASGPPA
Trigger: AGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTAGGAGTTGTTGGCCATaGGCTGTCTGCTGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGRSCWP*AVCCRV
Trigger: CACTCGGCAGCAGACAGCTCATGGCCAACAACTCCT...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTGAGCCGGTGCATCTCTaGGACTTCAACCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAEPVHL*DFNLDP
Trigger: CGGGTCCAGGTTGAAGTCTCAGAGATGCACCGGCTC...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCATATTCTGGGAGCTGCTaGGTGACCCTCAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSYSGSC*VTLKNF
Trigger: GAAGTTCTTGAGGGTCACTCAGCAGCTCCCAGAATA...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGAGCTCTGGGTCTCCGTaGTTCTTTCTGAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSSGSP*FFLKLC
Trigger: GCAGAGTTTCAGAAAGAAGCACGGAGACCCAGAGCT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTCTGGTCCTGGGGATCTaGTCCTGGAAGAGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPALVLGI*SWKSAV
Trigger: AACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAG...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGCCTCCGGCCCGCCTaGTGGTCCTGGGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFSLRPA*WSWGSA
Trigger: AGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCCCCAGAGCCCATCTGTaGATTAAACCCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVPRAHL*IKPMLG
Trigger: GCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGG...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGTCCGCGGAGCTCCCTaGCACCAGCACTGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFVRGAP*HQHCCR
Trigger: GCGGCAACAGTGCTGGTGGCAGGGAGCTCCGCGGAC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGAGCTGCAGGGGCGTTaGGGAGGTCTTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIELQGR*GGLPGA
Trigger: AGCTCCTGGAAGACCTCCGCAACGCCCCTGCAGCTC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTACATGGTCAGCAGGATaGAGTGCAGGGGCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGTWSAG*SAGARR
Trigger: TCTGCGAGCCCCTGCACTCCATCCTGCTGACCATGT...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAAACCAGCCTTCTGATGTaGAGACCAGCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PANRMNSGLENLLLLCRKTSLLM*RPAGAG
Trigger: CCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGT...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCCCGCCTGCTGGTCCTaGGGATCTGCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIPACWS*GSAPGR
Trigger: TCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTGGTCAAATAAAACATaGGAAGGCTGCCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRWSNKT*EGCPEP
Trigger: GGGCTCTGGGCAGCCTTCCCATGTTTTATTTGACCA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCACCCAAAACCACGATGTaGGTCACGTTTCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSPKTTM*VTFQCH
Trigger: GTGACACTGAAACGTGACCCACATCGTGGTTTTGGG...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 72 bp TCCTTCTTTGCAGAAAACCCCTCTGAGAAGGAGTTGTaGGCCATGAGCTGTCTGCTGCCGAGTGCACAGATC +
Preference number: 4 (lower is better)
Translates to: SFFAENPSEKEL*AMSCLLPSAQI
Trigger: GATCTGTGCACTCGGCAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCAAAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 72 bp AAGGCAAGGACCCCCAGCTGCAGCAGTATCTCTTCATaGCAGTACAGCCTCTCCTCCAGGATATCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: KARTPSCSSISS*QYSLSSRISFR
Trigger: TCGGAAAGATATCCTGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGCTGCAGCTGGGGGTCCTTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGCACAGATCCAGAGCTaGGCCTCCGGCCCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFAQIQS*ASGPPA
Trigger: AGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACACCCACAGTGCAGAGCTaGGCCGGTGCATCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTPTVQS*AGASLR
Trigger: TCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGG...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCTTTACTGGTCTTGGCTaGATCTGTGACAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFFTGLG*ICDKCV
Trigger: CACACATTTGTCACAGATTCAGCCAAGACCAGTAAA...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGGTTGAAGTTATCCATTaGTGTACTCAGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSVEVIH*CTQQAS
Trigger: GGAGGCCTGCTGAGTACATCAATGGATAACTTCAAC...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGTGCTGCCGTCCACGTTaGAGTTATCCATTGATGTAC +
Preference number: 4 (lower is better)
Translates to: SVIGASPANRMNSGLENLCCRPR*SYPLMY
Trigger: GTACATCAATGGATAACTTCAACGTGGACGGCAGCA...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGCCTCCTATTATTCTTTaGGCCTGCATGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSPPIIL*ACMHAL
Trigger: CAGAGCATGCATGCAGGCTCAAAGAATAATAGGAGG...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATCTGGCCTGGAAAACTTaGTCCTTCTTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHLAWKT*SFFAEN
Trigger: GTTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAG...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGGAGCAGGGGTCTCTTaGAAGTCTGTCCGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIGAGVS*KSVRGA
Trigger: AGCTCCGCGGACAGACTTGCAAGAGACCCCTGCTCC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTCTCCACCTCAGAAATaGTACCCAGAACCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSPPQK*YPEPSQ
Trigger: TTGGCTTGGTTCTGGGTACCATTTCTGAGGTGGAGA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCGGGGCCTGTGCCGCTaGGCTCTCGCTGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHRGLCR*ALAACP
Trigger: GGGACAAGCAGCGAGAGCCCAGCGGCACAGGCCCCG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCAGACTCGCAACAGGATGAACTCTaGCCTGGAAAACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SLRLQPGPVERSSSRSDSQQDEL*PGKLAP
Trigger: AGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTG...CGAGTCTGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATTCTAGGCCTTCATCATaGGACAACTTTCCAACAAGG +
Preference number: 4 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHSRPSS*DNFPTR
Trigger: CCTTGTTGGAAAGTTGTCCCATGATGAAGGCCTAGA...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTACAGAGCTTCACCCCTaGCCTGTAGGGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFTELHP*PVGRWP
Trigger: TGGCCAGCGCCCTACAGGTCAGGGGTGAAGCTCTGT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTCCACACAGAGGTCCCTaGGAGCCAAATAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGPHRGP*EPNRIS
Trigger: GGAAATCCTATTTGGCTCTCAGGGACCTCTGTGTGG...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCATCTGAGAATACTTGGTaGACCAGCACACCGTATTCT +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSSENTW*TSTPYS
Trigger: AGAATACGGTGTGCTGGTTCACCAAGTATTCTCAGA...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCCGGTTTCTCTCCACTaGAACCGTAACATTGCAATT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRPVSLH*NRNIAI
Trigger: AATTGCAATGTTACGGTTTCAGTGGAGAGAAACCGG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATGAGCATGACAATCTCTaGATCCAAATGAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHEHDNL*IQMRGL
Trigger: TAAGCCTCTCATTTGGATTCAGAGATTGTCATGCTC...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCCGCTGGGCTCTCGCTaGTTGTCCCACGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFPLGSR*LSHAAS
Trigger: AGAGGCTGCGTGGGACAAGCAGCGAGAGCCCAGCGG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAACACTCCGGGGCCTGTaGCGCTGGGCTCTCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTTLRGL*RWALAA
Trigger: AGCAGCGAGAGCCCAGCGGCACAGGCCCCGGAGTGT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCATTCTTTCTGAAACTCTaGAAGGATGCAGACACTCCG +
Preference number: 4 (lower is better)
Translates to: GASLRLQPGPVERSSSRSFFLKL*KDADTP
Trigger: CGGAGTGTCTGCATCCTTGCAGAGTTTCAGAAAGAA...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATAGCCTCCGGCCCGCCTaGTGGTCCTGGGGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHSLRPA*WSWGSA
Trigger: AGCAGATCCCCAGGACCAGCAGGCGGGCCGGAGGCT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCTGGCCTGGAAAACTTaGTCCTTCTTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLAWKT*SFFAEN
Trigger: GTTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTAGACCGGGCCTGGTGTaGAGGACTCAAATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPARPGLV*RTQIGH
Trigger: ATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCT...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACAGTCAAGGTGCTCCAATaGGGCTCTGGTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTVKVLQ*GSGELW
Trigger: CCAGAGCTCACCAGAGCCCCATTGGAGCACCTTGAC...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAACTGGGGATCTGCTCCTaGAAGAGCGCGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: PANRMNSGLENLLLLCRKLGICS*KSAVNK
Trigger: CTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAG...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCCCGCCTGCTGGTCCTaGGGATCTGCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFPACWS*GSAPGR
Trigger: TCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCAGCACCCTGAAGCCTaGATACAAACAACTCGTTTT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRQHPEA*IQTTRF
Trigger: AAAACGAGTTGTTTGTATCCAGGCTTCAGGGTGCTG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCAGCACCCTGAAGCCTaGATACAAACAACTCGTTTT +
Preference number: 4 (lower is better)
Translates to: SVIGASPANRMNSGLENLQHPEA*IQTTRF
Trigger: AAAACGAGTTGTTTGTATCCAGGCTTCAGGGTGCTG...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTATGCCAGGGTCAGCTTaGCCTGAATACTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGMPGSA*PEYSPS
Trigger: TGAGGGAGAGTATTCAGGCCAAGCTGACCCTGGCAT...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTCTAGGCCTTCATCATaGGACAACTTTCCAACAAGG +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSRPSS*DNFPTR
Trigger: CCTTGTTGGAAAGTTGTCCCATGATGAAGGCCTAGA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTTCAACGTGAAAGTATaGCTTACTCTCCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRFNVKV*LTLHLL
Trigger: GAGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR TCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTACAAGGAGGCTGCAGTaGCTGTGTGTCAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVITRRLQ*LCVKVL
Trigger: GAGCACCTTGACACACAGTCACTGCAGCCTCCTTGT...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTCCAAGCCAAAGTAGGTaGGTTCCTCGAGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAPSQSR*VPRGWQ
Trigger: TTGCCAACCTCGAGGAACTCACCTACTTTGGCTTGG...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACATTCATGGAGGTCTTCTaGGGCTGCTCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTFMEVF*GCSLQP
Trigger: AGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAA...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCGCAGCCCATAGTGGCTaGCAAAGAACTTTATCCTCA +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVAAHSG*QRTLSS
Trigger: TGAGGATAAAGTTCTTTGTCAGCCACTATGGGCTGC...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGAGCCGGTGCATCTCTaGGACTTCAACCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFEPVHL*DFNLDP
Trigger: CGGGTCCAGGTTGAAGTCTCAGAGATGCACCGGCTC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCTCACTTCATAGACTATaGCACCCTTGGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVSLHRL*HPWHRS
Trigger: GGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGA...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCCTGCATGCATGCTCTaGACAGGTGGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIPACML*TGGPER
Trigger: TCTCTCTGGACCACCTGTTCAGAGCATGCATGCAGG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCAAAAGAGAGAGACCTaGGGGCACCGTATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIQKRET*GHRIPG
Trigger: CCCTGGAATACGGTGCCCTCAGGTCTCTCTCTTTTG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGAACCGACTGCAACGTaGACCGCCTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFEPTAT*TACEAG
Trigger: ACCAGCCTCACAGGCGGTGCACGTTGCAGTCGGTTC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTTTTACCTCCAGGTGCTaGCCGTTCAGCAGGACCACA +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIFTSRC*PFSRTT
Trigger: TGTGGTCCTGCTGAACGGGCAGCACCTGGAGGTAAA...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCATTTTACCTCCAGGTaGTGCCCGTTCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIHFTSR*CPFSRT
Trigger: GGTCCTGCTGAACGGGCAGCACCTGGAGGTAAAATG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TCTGCTGTTGTTTTTCACTTCATAGACTATGACACCCTTGGCACAGATCCCCAGGCAGAGCTGAGCCGGTaGATCTCTGAGACTTCAACC +
Preference number: 4 (lower is better)
Translates to: SAVVFHFIDYDTLGTDPQAELSR*ISETST
Trigger: GGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGC...CTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTTGTGCATTAAACCCATaGTGGGCTGAGCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPACALNP*WAEQRS
Trigger: GGACCTCTGCTCAGCCCAGCATGGGTTTAATGCACA...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGCGCCCGATGCCTTCTaGTCCAGCCTCCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTAPDAF*SSLLAA
Trigger: GGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACAGGCACTCTTCAGCTaGTCCCGGCCAGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTQALFS*SRPVQG
Trigger: CCCCTGCACTGGCCGGGAGCAGCTGAAGAGTGCCTG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCTTCAGGGCTAGTATCTaGCCTCCTGGTTTGATCGTT +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVFRASI*PPGLIV
Trigger: AACGATCAAACCAGGAGGGCAGATACTAGCCCTGAA...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGGAGCAGGGGTCTCTTaGAAGTCTGTCCGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFGAGVS*KSVRGA
Trigger: AGCTCCGCGGACAGACTTGCAAGAGACCCCTGCTCC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTACCAGCCTTCTGATGTaGAGACCAGCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFTSLLM*RPAGAG
Trigger: CCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTGCATTAAACCCATGCTaGGCTGAGCAGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAALNPC*AEQRSS
Trigger: ACTGGACCTCTGCTCAGCCCAGCATGGGTTTAATGC...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATACAGAGCTTCACCCCTaGCCTGTAGGGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHTELHP*PVGRWP
Trigger: TGGCCAGCGCCCTACAGGTCAGGGGTGAAGCTCTGT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAACTCCGTGCTTCTTTCTaGAACTCTGCAAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: PANRMNSGLENLLLLCRKLRASF*NSARMQ
Trigger: CTGCATCCTTGCAGAGTTTCAGAAAGAAGCACGGAG...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCCAATGGGGCTCTGGTaGGCTCTGGGTCTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHPMGLW*ALGLRA
Trigger: AGCACGGAGACCCAGAGCTCACCAGAGCCCCATTGG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCAATGGGGCTCTGGTaGGCTCTGGGTCTCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPMGLW*ALGLRA
Trigger: AGCACGGAGACCCAGAGCTCACCAGAGCCCCATTGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGGAGTTGTTGGCCATaGGCTGTCTGCTGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFRSCWP*AVCCRV
Trigger: CACTCGGCAGCAGACAGCTCATGGCCAACAACTCCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGAGCCGGTGCATCTCTaGGACTTCAACCTGGACCCG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFEPVHL*DFNLDP
Trigger: CGGGTCCAGGTTGAAGTCTCAGAGATGCACCGGCTC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCCCACAGTGCAGAGCTaGGCCGGTGCATCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFPTVQS*AGASLR
Trigger: TCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCCCTCCAGACTGATGTaGTTCAGGGCTAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIPSRLM*FRASIC
Trigger: GCAGATACTAGCCCTGAATCACATCAGTCTGGAGGG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCTGCAGGGGCTGAGATaGATCAGGCTGCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFLQGLR*IRLLIL
Trigger: GAGGATGAGCAGCCTGATGCATCTCAGCCCCTGCAG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305531.3
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACCGCTGGGCTCTCGCTaGTTGTCCCACGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTPLGSR*LSHAAS
Trigger: AGAGGCTGCGTGGGACAAGCAGCGAGAGCCCAGCGG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCTGGTCCTGGGGATCTaGTCCTGGAAGAGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFLVLGI*SWKSAV
Trigger: AACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCTGTCTGCTGCCGAGTaGACAGATCCAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFLSAAE*TDPELS
Trigger: GCTCAGCTCTGGATCTGTGCACTCGGCAGCAGACAG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATCTCAAATTGGCCATTTaGACAAACTTATCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHLKLAI*TNLSWS
Trigger: TGACCATGATAAGTTTGTGCAAATGGCCAATTTGAG...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGCGCCCGATGCCTTCTaGTCCAGCCTCCTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTAPDAF*SSLLAA
Trigger: GGCAGCAAGGAGGCTGGAGCAGAAGGCATCGGGCGC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAAGGGGCTGCGCCCGATaGCTTCTGCTCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTRGCAR*LLLQPP
Trigger: AGGAGGCTGGAGCAGAAGGCATCGGGCGCAGCCCCT...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACACAGAGGACAGGCTCATaGCTGCGTCCTTCGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTQRTGS*LRPSLK
Trigger: CTTTAACGAAGGACGCAGGCATGAGCCTGTCCTCTG...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTACATGGTCAGCAGGATaGAGTGCAGGGGCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFTWSAG*SAGARR
Trigger: TCTGCGAGCCCCTGCACTCCATCCTGCTGACCATGT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCCGCCTGCTGGTCCTaGGGATCTGCTCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPACWS*GSAPGR
Trigger: TCTTCCAGGAGCAGATCCCCAGGACCAGCAGGCGGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp CTGCTGCACAGAGGAGCTTTCCTCCACAACTCTTTTCTCCACCTCAGAAATGGTCTCGATCAGACTCGCTaGGATGTAATCTTCAACGTG +
Preference number: 4 (lower is better)
Translates to: LLHRGAFLHNSFLHLRNGLDQTR*DVIFNV
Trigger: CACGTTGAAGATTACATCCCAGCGAGTCTGATCGAG...ACCATTTCTGAGGTGGAGAAAAGAGTTGTGGAGGAAAGCTCCTCTGTGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGGTGCAGGACTCAAATTaGCCATTTGCACAAACTTAT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRVQDSN*PFAQTY
Trigger: ATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCAC...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAACAGGTCATTGGCTTCTaGATCACACAGGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: PANRMNSGLENLLLLCRKQVIGF*ITQALF
Trigger: GAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTG...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCTTCAACGTGAAAGTATaGCTTACTCTCCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVFNVKV*LTLHLL
Trigger: GAGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAA...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
3UTR CAA 72 bp GTGAGTTCCTCGAGGTTGGCAAAGGATGTCACGGCATaGAAGACAGCTCCCACTGTTGATTCAACATCACAT +
Preference number: 4 (lower is better)
Translates to: VSSSRLAKDVTA*KTAPTVDSTSH
Trigger: ATGTGATGTTGAATCAACAGTGGGAGCTGTCTTCAATGCCGTGACATCCTTTGCCAACCTCGAGGAACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCAGAGCTGCAGGGGCTaGGATGCATCAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHQSCRG*DASGCS
Trigger: TGAGCAGCCTGATGCATCTCAGCCCCTGCAGCTCTG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305531.3
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAACGTGCACCGCCTGTaGGGCTGGTCTTCACACATG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFNVHRL*GWSSHM
Trigger: CATGTGTGAAGACCAGCCTCACAGGCGGTGCACGTT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAGGAGTTGTTGGCCATaGGCTGTCTGCTGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFRSCWP*AVCCRV
Trigger: CACTCGGCAGCAGACAGCTCATGGCCAACAACTCCT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTTCATGGAGGTCTTCTaGGGCTGCTCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFFMEVF*GCSLQP
Trigger: AGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCTGGGAGCTGCTGAGTaGCCCTCAAGAACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFLGAAE*PSRTSA
Trigger: AGCTGAAGTTCTTGAGGGTCACTCAGCAGCTCCCAG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACATGGCCTCCTCTTCTCTaGGAATACTTGGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTWPPLL*EYLVNQ
Trigger: CTGGTTCACCAAGTATTCTCAGAGAAGAGGAGGCCA...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCCTGCATGCATGCTCTaGACAGGTGGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFPACML*TGGPER
Trigger: TCTCTCTGGACCACCTGTTCAGAGCATGCATGCAGG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTTTGGACAAGTTTATTaGCTTCTTTGGAACCTCAGT +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRFGQVY*LLWNLS
Trigger: ACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGTCCGAGGAATCGTTaGGGAGGTCTTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFSPRNR*GGLPGA
Trigger: AGCTCCTGGAAGACCTCCGCAACGATTCCTCGGACT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATGAACCGACTGCAACGTaGACCGCCTGTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHEPTAT*TACEAG
Trigger: ACCAGCCTCACAGGCGGTGCACGTTGCAGTCGGTTC...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGGGAAAAAGAACTCTTTaGTTTTCATATACGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRGKRTL*FSYTPS
Trigger: GCTTGGCGTATATGAAAAGCAAAGAGTTCTTTTTCC...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTGCAGTATCTCTTCATTaGAGTACAGCCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAAVSLH*STASPP
Trigger: TGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGC...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGCAGAGCTGAGCCGGTaGATCTCTGAGACTTCAACC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFAELSR*ISETST
Trigger: GGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCCCAGAGCCCATCTGTaGATTAAACCCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFPRAHL*IKPMLG
Trigger: GCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGACCGGGCCTGGTGTaGAGGACTCAAATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFRPGLV*RTQIGH
Trigger: ATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATACCAGTCTTGCAACCTaGCCAGGACCCGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHTSLAT*PGPVRH
Trigger: GTGCCTGACGGGTCCTGGGCAGGTTGCAAGACTGGT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAACCAGCCTTCTGATGTaGAGACCAGCAGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTTSLLM*RPAGAG
Trigger: CCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGTCAAGGTGCTCCAATaGGGCTCTGGTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFVKVLQ*GSGELW
Trigger: CCAGAGCTCACCAGAGCCCCATTGGAGCACCTTGAC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCAGCACACCGTATTCTaGGAGCTGCTGAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFQHTVF*ELLSDP
Trigger: AGGGTCACTCAGCAGCTCCCAGAATACGGTGTGCTG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTTGGTCAAATAAAACATaGGAAGGCTGCCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIWSNKT*EGCPEP
Trigger: GGGCTCTGGGCAGCCTTCCCATGTTTTATTTGACCA...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGTTTTGCTTTTTCTGCTaGTCCTCCAGGTATAATAGA +
Preference number: 4 (lower is better)
Translates to: SVIGASPANRMNSGLENLFCFFC*SSRYNR
Trigger: TCTATTATACCTGGAGGACCAGCAGAAAAAGCAAAA...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGCAGTTCAGGGGCCTTaGAAGGAGCAGCCTCTATAT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFAVQGP*KEQPLY
Trigger: ATATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAACGTGCACCGCCTGTaGGGCTGGTCTTCACACATG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTNVHRL*GWSSHM
Trigger: CATGTGTGAAGACCAGCCTCACAGGCGGTGCACGTT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAAGCCAACCAGCCTTCTaGTGTGGAGACCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTSQPAF*CGDQQG
Trigger: CCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGCT...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGGATGTCACGGCATTaGAGACAGCTCCCACTGTTG +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFRMSRH*RQLPLL
Trigger: CAACAGTGGGAGCTGTCTTCAATGCCGTGACATCCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACCCACAGTGCAGAGCTaGGCCGGTGCATCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTPTVQS*AGASLR
Trigger: TCTCAGAGATGCACCGGCTCAGCTCTGCACTGTGGG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCCTCCTGCAGCACCCTaGAGCCTGGATACAAACAAC +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFPPAAP*SLDTNN
Trigger: GTTGTTTGTATCCAGGCTTCAGGGTGCTGCAGGAGG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TCTGCTGTTGTTTTTCACTTCATAGACTATGACACCCTTGGCACAGATCCCCAGAGGGTCAGCTTGGCCTaGATACTCTCCCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: SAVVFHFIDYDTLGTDPQRVSLA*ILSLIN
Trigger: ATTAATGAGGGAGAGTATTCAGGCCAAGCTGACCCT...CTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACTGGTCCTGGGGATCTaGTCCTGGAAGAGCGCGGTT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLVLGI*SWKSAV
Trigger: AACCGCGCTCTTCCAGGAGCAGATCCCCAGGACCAG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCTGTCTGCTGCCGAGTaGACAGATCCAGAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHLSAAE*TDPELS
Trigger: GCTCAGCTCTGGATCTGTGCACTCGGCAGCAGACAG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTTTACCTCCAGGTGCTaGCCGTTCAGCAGGACCACA +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFFTSRC*PFSRTT
Trigger: TGTGGTCCTGCTGAACGGGCAGCACCTGGAGGTAAA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGCAGAGCTGAGCCGGTaGATCTCTGAGACTTCAACC +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFAELSR*ISETST
Trigger: GGTTGAAGTCTCAGAGATGCACCGGCTCAGCTCTGC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTGTGCATTAAACCCATaGTGGGCTGAGCAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFCALNP*WAEQRS
Trigger: GGACCTCTGCTCAGCCCAGCATGGGTTTAATGCACA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGAGACCAGCAGGGGCTaGGTAGACAGACACTTCTTT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFETSRG*VDRHFF
Trigger: AAAGAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACATCTCCACCTCAGAAATaGTACCCAGAACCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTSPPQK*YPEPSQ
Trigger: TTGGCTTGGTTCTGGGTACCATTTCTGAGGTGGAGA...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGGCTCTGGTGAGCTCTaGGTCTCCGTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFGSGEL*VSVLLS
Trigger: AGAAAGAAGCACGGAGACCCAGAGCTCACCAGAGCC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCTGGGGATCTGCTCCTaGAAGAGCGCGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFLGICS*KSAVNK
Trigger: CTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGCATTAAACCCATGCTaGGCTGAGCAGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFALNPC*AEQRSS
Trigger: ACTGGACCTCTGCTCAGCCCAGCATGGGTTTAATGC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGAGTCCCAGGTCATTaGCTTCTGGATCACACAGGC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFRVPGH*LLDHTG
Trigger: GCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGACAGACTCGTCACATaGCAAGCAGAGTCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFDRLVT*QAESVR
Trigger: TCTGACCGACTCTGCTTGCCATGTGACGAGTCTGTC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGGAGCAGCCTCTATATaGGAAACACGGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFGAASI*ETRPWK
Trigger: TTTCCAAGGCCGTGTTTCTCATATAGAGGCTGCTCC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAACAAGGAGGCTGCAGTaGCTGTGTGTCAAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTTRRLQ*LCVKVL
Trigger: GAGCACCTTGACACACAGTCACTGCAGCCTCCTTGT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAGGATGTCACGGCATTaGAGACAGCTCCCACTGTTG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFRMSRH*RQLPLL
Trigger: CAACAGTGGGAGCTGTCTTCAATGCCGTGACATCCT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTGGCCTCCTCTTCTCTaGGAATACTTGGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFWPPLL*EYLVNQ
Trigger: CTGGTTCACCAAGTATTCTCAGAGAAGAGGAGGCCA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCCGGTTTCTCTCCACTaGAACCGTAACATTGCAATT +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIPVSLH*NRNIAI
Trigger: AATTGCAATGTTACGGTTTCAGTGGAGAGAAACCGG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCTCCTGCAGCACCCTaGAGCCTGGATACAAACAAC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPPAAP*SLDTNN
Trigger: GTTGTTTGTATCCAGGCTTCAGGGTGCTGCAGGAGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCTGCATGCATGCTCTaGACAGGTGGTCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPACML*TGGPER
Trigger: TCTCTCTGGACCACCTGTTCAGAGCATGCATGCAGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACATCTGCCCTCCTGGTTTaGTCGTTTTTGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTSALLV*SFLLFL
Trigger: CAGAAAAAGCAAAAACGATCAAACCAGGAGGGCAGA...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAGTCCGAGGAATCGTTaGGGAGGTCTTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTSPRNR*GGLPGA
Trigger: AGCTCCTGGAAGACCTCCGCAACGATTCCTCGGACT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGAAACTCTGCAAGGATaGAGACACTCCGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTETLQG*RHSGAC
Trigger: ACAGGCCCCGGAGTGTCTGCATCCTTGCAGAGTTTC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGACTGTGTGTCAAGGTaGTCCAATGGGGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTDCVSR*SNGALV
Trigger: CACCAGAGCCCCATTGGAGCACCTTGACACACAGTC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATTTACCTCCAGGTGCTaGCCGTTCAGCAGGACCACA +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTFTSRC*PFSRTT
Trigger: TGTGGTCCTGCTGAACGGGCAGCACCTGGAGGTAAA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCATTTTACCTCCAGGTaGTGCCCGTTCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHHFTSR*CPFSRT
Trigger: GGTCCTGCTGAACGGGCAGCACCTGGAGGTAAAATG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACATTTTACCTCCAGGTaGTGCCCGTTCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTHFTSR*CPFSRT
Trigger: GGTCCTGCTGAACGGGCAGCACCTGGAGGTAAAATG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCCCAGAGCCCATCTGTaGATTAAACCCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHPRAHL*IKPMLG
Trigger: GCCCAGCATGGGTTTAATGCACAGATGGGCTCTGGG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATAGACCGGGCCTGGTGTaGAGGACTCAAATTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHRPGLV*RTQIGH
Trigger: ATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTTGGTTTGATCGTTTTTaGTTTTTCTGCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAWFDRF*FFCWSS
Trigger: GGAGGACCAGCAGAAAAAGCAAAAACGATCAAACCA...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAACATGGTCAGCAGGATaGAGTGCAGGGGCTCGCAGA +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTTWSAG*SAGARR
Trigger: TCTGCGAGCCCCTGCACTCCATCCTGCTGACCATGT...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCTGGGGATCTGCTCCTaGAAGAGCGCGGTTAACAAG +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHLGICS*KSAVNK
Trigger: CTTGTTAACCGCGCTCTTCCAGGAGCAGATCCCCAG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCTGAGACTTCAACCTaGACCCGTAGAGCGGTCATC +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFSETST*TRRAVI
Trigger: GATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACAGCACACCGTATTCTaGGAGCTGCTGAGTGACCCT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTQHTVF*ELLSDP
Trigger: AGGGTCACTCAGCAGCTCCCAGAATACGGTGTGCTG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGGCTTAGACCGGGCCTaGTGTGCAGGACTCAAATTG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTGLDRA*CAGLKL
Trigger: CAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCAGGTCATTGGCTTCTaGATCACACAGGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFQVIGF*ITQALF
Trigger: GAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACTGCAGGGGCTGATGTaGCGGAACATGAAACCCTGC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLQGLM*RNMKPC
Trigger: GCAGGGTTTCATGTTCCGCCACATCAGCCCCTGCAG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374201.8
3UTR CAA 72 bp CAGACTCGTCACATGGCAAGCAGAGTCGGTCAGACTTaGGACAAGTTTATTGACTTCTTTGGAACCTCAGTT +
Preference number: 4 (lower is better)
Translates to: QTRHMASRVGQT*DKFIDFFGTSV
Trigger: AACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGCTTGCCATGTGACGAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR CAA 72 bp AGAGGCTTAGACCGGGCCTGGTGTGCAGGACTCAAATaGGCCATTTGCACAAACTTATCATGGTCAAATAAA +
Preference number: 4 (lower is better)
Translates to: RGLDRAWCAGLK*AICTNLSWSNK
Trigger: TTTATTTGACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTGCAGAAAACCCCTCTaGGAAGGAGTTGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFCRKPL*EGVVGH
Trigger: ATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCTCCAGCCAACAGGATaGACTCTGGCCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHLQPTG*TLAWKT
Trigger: AGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCACACAGAGGTCCCTaGGAGCCAAATAGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPHRGP*EPNRIS
Trigger: GGAAATCCTATTTGGCTCTCAGGGACCTCTGTGTGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACATTCATGGAGGTCTTCTaGGGCTGCTCTCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTFMEVF*GCSLQP
Trigger: AGGCTGGAGAGAGCAGCCTCAGAAGACCTCCATGAA...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGCAGCCCATAGTGGCTaGCAAAGAACTTTATCCTCA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFAAHSG*QRTLSS
Trigger: TGAGGATAAAGTTCTTTGTCAGCCACTATGGGCTGC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTATTCTGGGAGCTGCTaGGTGACCCTCAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFYSGSC*VTLKNF
Trigger: GAAGTTCTTGAGGGTCACTCAGCAGCTCCCAGAATA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTGGCCTCCTCTTCTCTaGGAATACTTGGTGAACCAG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFWPPLL*EYLVNQ
Trigger: CTGGTTCACCAAGTATTCTCAGAGAAGAGGAGGCCA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGGGTCAGCTTGGCCTaGATACTCTCCCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFRVSLA*ILSLIN
Trigger: ATTAATGAGGGAGAGTATTCAGGCCAAGCTGACCCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCCTCCAGACTGATGTaGTTCAGGGCTAGTATCTGC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPSRLM*FRASIC
Trigger: GCAGATACTAGCCCTGAATCACATCAGTCTGGAGGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATTGAGCCTGCATGCATaGTCTGAACAGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTLSLHA*SEQVVQ
Trigger: CTGGACCACCTGTTCAGAGCATGCATGCAGGCTCAA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTTCAGGGCTAGTATCTaGCCTCCTGGTTTGATCGTT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFFRASI*PPGLIV
Trigger: AACGATCAAACCAGGAGGGCAGATACTAGCCCTGAA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCAGAGGACAGGCTCATaGCTGCGTCCTTCGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHQRTGS*LRPSLK
Trigger: CTTTAACGAAGGACGCAGGCATGAGCCTGTCCTCTG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGACATGCATCTGAGATaGATCAGGCTGCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFDMHLR*IRLLIL
Trigger: GAGGATGAGCAGCCTGATGCATCTCAGATGCATGTC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCAACAGGATGAACTCTaGCCTGGAAAACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFQQDEL*PGKLAP
Trigger: AGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATGCATTAAACCCATGCTaGGCTGAGCAGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHALNPC*AEQRSS
Trigger: ACTGGACCTCTGCTCAGCCCAGCATGGGTTTAATGC...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAATGCCAGGGTCAGCTTaGCCTGAATACTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTMPGSA*PEYSPS
Trigger: TGAGGGAGAGTATTCAGGCCAAGCTGACCCTGGCAT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATATGCCAGGGTCAGCTTaGCCTGAATACTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHMPGSA*PEYSPS
Trigger: TGAGGGAGAGTATTCAGGCCAAGCTGACCCTGGCAT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAAATGCAGCACCTCCTaGAAGATGAGGCCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTKCSTS*KMRPSV
Trigger: CACGGAAGGCCTCATCTTCCAGGAGGTGCTGCATTT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATGACAGACTCGTCACATaGCAAGCAGAGTCGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHDRLVT*QAESVR
Trigger: TCTGACCGACTCTGCTTGCCATGTGACGAGTCTGTC...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGGAGCAGCCTCTATATaGGAAACACGGCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTGAASI*ETRPWK
Trigger: TTTCCAAGGCCGTGTTTCTCATATAGAGGCTGCTCC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGCAGTTCAGGGGCCTTaGAAGGAGCAGCCTCTATAT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTAVQGP*KEQPLY
Trigger: ATATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCTCCGTGCTTCTTTCTaGAACTCTGCAAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHLRASF*NSARMQ
Trigger: CTGCATCCTTGCAGAGTTTCAGAAAGAAGCACGGAG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATGCAGAAAACCCCTCTaGGAAGGAGTTGTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTCRKPL*EGVVGH
Trigger: ATGGCCAACAACTCCTTCTCAGAGGGGTTTTCTGCA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTGCTGCCGTCCACGTTaGAGTTATCCATTGATGTAC +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFCCRPR*SYPLMY
Trigger: GTACATCAATGGATAACTTCAACGTGGACGGCAGCA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCCTCCTATTATTCTTTaGGCCTGCATGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFPPIIL*ACMHAL
Trigger: CAGAGCATGCATGCAGGCTCAAAGAATAATAGGAGG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAGGGTCAGCTTGGCCTaGATACTCTCCCTCATTAAT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFRVSLA*ILSLIN
Trigger: ATTAATGAGGGAGAGTATTCAGGCCAAGCTGACCCT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATTGCAAGCAGGGCAATaGCCCAGTTCTAAGACAGAC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTLQAGQ*PSSKTD
Trigger: GTCTGTCTTAGAACTGGGTCATTGCCCTGCTTGCAA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAATCCAAAAGTCTCCGTaGCCAGGTCTAGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTIQKSP*PGLGLH
Trigger: ATGAAGGCCTAGACCTGGTCACGGAGACTTTTGGAT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATAACATGAAACCCTGCTaGCCAGTAGAGGGTCATTCC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHNMKPC*PVEGHS
Trigger: GGAATGACCCTCTACTGGTCAGCAGGGTTTCATGTT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTTCTTTCTGAAACTCTaGAAGGATGCAGACACTCCG +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFFFLKL*KDADTP
Trigger: CGGAGTGTCTGCATCCTTGCAGAGTTTCAGAAAGAA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAGCTCTGGGTCTCCGTaGTTCTTTCTGAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTSSGSP*FFLKLC
Trigger: GCAGAGTTTCAGAAAGAAGCACGGAGACCCAGAGCT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCGCAGTATCTCTTCATTaGAGTACAGCCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFAVSLH*STASPP
Trigger: TGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGC...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTCGTTTTTGCTTTTTCTaGTGGTCCTCCAGGTATAAT +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIRFCFF*WSSRYN
Trigger: ATTATACCTGGAGGACCAGCAGAAAAAGCAAAAACG...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTTCAGGGCTAGTATCTaGCCTCCTGGTTTGATCGTT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFFRASI*PPGLIV
Trigger: AACGATCAAACCAGGAGGGCAGATACTAGCCCTGAA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGAGACCAGCAGGGGCTaGGTAGACAGACACTTCTTT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTETSRG*VDRHFF
Trigger: AAAGAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp CTGGATCATCCTAACAGCCATGTTGAATGTGAAGCCCTCCAGACTGATGTGATTGTGCAGGACTCAAATTaGCCATTTGCACAAACTTAT +
Preference number: 4 (lower is better)
Translates to: LDHPNSHVECEALQTDVIVQDSN*PFAQTY
Trigger: ATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCAC...AATCACATCAGTCTGGAGGGCTTCACATTCAACATGGCTGTTAGGATGATCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAAGAGTCCCAGGTCATTaGCTTCTGGATCACACAGGC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTRVPGH*LLDHTG
Trigger: GCCTGTGTGATCCAGAAGCCAATGACCTGGGACTCT...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCCAAAACCACGATGTaGGTCACGTTTCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPKTTM*VTFQCH
Trigger: GTGACACTGAAACGTGACCCACATCGTGGTTTTGGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCCCAAAACCACGATGTaGGTCACGTTTCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHPKTTM*VTFQCH
Trigger: GTGACACTGAAACGTGACCCACATCGTGGTTTTGGG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTATGATAGAAGCAGCTaGAGCACCTTACCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFYDRSS*STLPSS
Trigger: TGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACATATTCTGGGAGCTGCTaGGTGACCCTCAAGAACTTC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTYSGSC*VTLKNF
Trigger: GAAGTTCTTGAGGGTCACTCAGCAGCTCCCAGAATA...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCTGAGAATACTTGGTaGACCAGCACACCGTATTCT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFSENTW*TSTPYS
Trigger: AGAATACGGTGTGCTGGTTCACCAAGTATTCTCAGA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATCACTTCATAGACTATaGCACCCTTGGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTSLHRL*HPWHRS
Trigger: GGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCCGGTTTCTCTCCACTaGAACCGTAACATTGCAATT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFPVSLH*NRNIAI
Trigger: AATTGCAATGTTACGGTTTCAGTGGAGAGAAACCGG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTGCTGCCGTCCACGTTaGAGTTATCCATTGATGTAC +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHCCRPR*SYPLMY
Trigger: GTACATCAATGGATAACTTCAACGTGGACGGCAGCA...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCTGCCCTCCTGGTTTaGTCGTTTTTGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFSALLV*SFLLFL
Trigger: CAGAAAAAGCAAAAACGATCAAACCAGGAGGGCAGA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTGGTTTGATCGTTTTTaGTTTTTCTGCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFWFDRF*FFCWSS
Trigger: GGAGGACCAGCAGAAAAAGCAAAAACGATCAAACCA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTCTCCACCTCAGAAATaGTACCCAGAACCAAGCCAA +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHSPPQK*YPEPSQ
Trigger: TTGGCTTGGTTCTGGGTACCATTTCTGAGGTGGAGA...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCAACAGGATGAACTCTaGCCTGGAAAACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHQQDEL*PGKLAP
Trigger: AGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTTCAACGTGAAAGTATaGCTTACTCTCCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFFNVKV*LTLHLL
Trigger: AAGGAGGTGGAGAGTAAGCCATACTTTCACGTTGAA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305531.3
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACTCGATCAGACTCGCTaGGATGTAATCTTCAACGTG +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTLDQTR*DVIFNV
Trigger: CACGTTGAAGATTACATCCCAGCGAGTCTGATCGAG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACATGGTCAAATAAAACATaGGAAGGCTGCCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTWSNKT*EGCPEP
Trigger: GGGCTCTGGGCAGCCTTCCCATGTTTTATTTGACCA...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACAGGTCATTGGCTTCTaGATCACACAGGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTQVIGF*ITQALF
Trigger: GAAGAGTGCCTGTGTGATCCAGAAGCCAATGACCTG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATATGATAGAAGCAGCTaGAGCACCTTACCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTYDRSS*STLPSS
Trigger: TGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR CAA 72 bp TGGCAAGCAGAGTCGGTCAGACTTTGGACAAGTTTATaGACTTCTTTGGAACCTCAGTTTTCTCATTTGACA +
Preference number: 4 (lower is better)
Translates to: WQAESVRLWTSL*TSLEPQFSHLT
Trigger: TGTCAAATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGCTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGCAGCCCATAGTGGCTaGCAAAGAACTTTATCCTCA +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTAAHSG*QRTLSS
Trigger: TGAGGATAAAGTTCTTTGTCAGCCACTATGGGCTGC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATCTGAGAATACTTGGTaGACCAGCACACCGTATTCT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTSENTW*TSTPYS
Trigger: AGAATACGGTGTGCTGGTTCACCAAGTATTCTCAGA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACATCACTTCATAGACTATaGCACCCTTGGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTSLHRL*HPWHRS
Trigger: GGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGA...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGTTGAAGTTATCCATTaGTGTACTCAGCAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTVEVIH*CTQQAS
Trigger: GGAGGCCTGCTGAGTACATCAATGGATAACTTCAAC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTCTGCCCTCCTGGTTTaGTCGTTTTTGCTTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHSALLV*SFLLFL
Trigger: CAGAAAAAGCAAAAACGATCAAACCAGGAGGGCAGA...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTTCTTTCTGAAACTCTaGAAGGATGCAGACACTCCG +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHFFLKL*KDADTP
Trigger: CGGAGTGTCTGCATCCTTGCAGAGTTTCAGAAAGAA...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGCAGTATCTCTTCATTaGAGTACAGCCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTAVSLH*STASPP
Trigger: TGGAGGAGAGGCTGTACTGCAATGAAGAGATACTGC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACTCGATCAGACTCGCTaGGATGTAATCTTCAACGTG +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLDQTR*DVIFNV
Trigger: CACGTTGAAGATTACATCCCAGCGAGTCTGATCGAG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGAGCATGACAATCTCTaGATCCAAATGAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTEHDNL*IQMRGL
Trigger: TAAGCCTCTCATTTGGATTCAGAGATTGTCATGCTC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACTGGCCTGGAAAACTTaGTCCTTCTTTGCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLAWKT*SFFAEN
Trigger: GTTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCTCAAATTGGCCATTTaGACAAACTTATCATGGTCA +
Preference number: 4 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFLKLAI*TNLSWS
Trigger: TGACCATGATAAGTTTGTGCAAATGGCCAATTTGAG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCGTTTTTGCTTTTTCTaGTGGTCCTCCAGGTATAAT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFRFCFF*WSSRYN
Trigger: ATTATACCTGGAGGACCAGCAGAAAAAGCAAAAACG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATGGTTTGATCGTTTTTaGTTTTTCTGCTGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTWFDRF*FFCWSS
Trigger: GGAGGACCAGCAGAAAAAGCAAAAACGATCAAACCA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACAGCACCCTGAAGCCTaGATACAAACAACTCGTTTT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTQHPEA*IQTTRF
Trigger: AAAACGAGTTGTTTGTATCCAGGCTTCAGGGTGCTG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACATTTACTGGTCTTGGCTaGATCTGTGACAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTFTGLG*ICDKCV
Trigger: CACACATTTGTCACAGATTCAGCCAAGACCAGTAAA...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGAGCATGACAATCTCTaGATCCAAATGAGAGGCTTA +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTEHDNL*IQMRGL
Trigger: TAAGCCTCTCATTTGGATTCAGAGATTGTCATGCTC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR TCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTTTGGACAAGTTTATTaGCTTCTTTGGAACCTCAGT +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFFGQVY*LLWNLS
Trigger: ACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACTTCAGGAGCTATTTTaGACAATCTGGTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTLQELF*TIWFHC
Trigger: ACAGTGAAACCAGATTGTGCAAAATAGCTCCTGAAG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCTATTTTGCACAATCTaGTTTCACTGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFLFCTI*FHCPGK
Trigger: TTTTCCTGGACAGTGAAACCAGATTGTGCAAAATAG...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGTGCAGGACTCAAATTaGCCATTTGCACAAACTTAT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTVQDSN*PFAQTY
Trigger: ATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCAC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAGAGTCGGTCAGACTTTaGACAAGTTTATTGACTTCT +
Preference number: 4 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTESVRL*TSLLTS
Trigger: AGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTC...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATGAGTCGGTCAGACTTTaGACAAGTTTATTGACTTCT +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHESVRL*TSLLTS
Trigger: AGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTC...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
3UTR CAA 72 bp AAATCTTCCCGGTTTCTCTCCACTGAAACCGTAACATaGCAATTCTGCTGTTGTTTTTCACTTCATAGACTA +
Preference number: 4 (lower is better)
Translates to: KSSRFLSTETVT*QFCCCFSLHRL
Trigger: TAGTCTATGAAGTGAAAAACAACAGCAGAATTGCAATGTTACGGTTTCAGTGGAGAGAAACCGGGAAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACTTCAGGAGCTATTTTaGACAATCTGGTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLQELF*TIWFHC
Trigger: ACAGTGAAACCAGATTGTGCAAAATAGCTCCTGAAG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCTCAAATTGGCCATTTaGACAAACTTATCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHLKLAI*TNLSWS
Trigger: TGACCATGATAAGTTTGTGCAAATGGCCAATTTGAG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR GCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACGTTTTTGCTTTTTCTaGTGGTCCTCCAGGTATAAT +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTRFCFF*WSSRYN
Trigger: ATTATACCTGGAGGACCAGCAGAAAAAGCAAAAACG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTTTTGCTTTTTCTGCTaGTCCTCCAGGTATAATAGA +
Preference number: 4 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHFCFFC*SSRYNR
Trigger: TCTATTATACCTGGAGGACCAGCAGAAAAAGCAAAA...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACTATTTTGCACAATCTaGTTTCACTGTCCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLFCTI*FHCPGK
Trigger: TTTTCCTGGACAGTGAAACCAGATTGTGCAAAATAG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CCA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACATTTTGCTTTTTCTGCTaGTCCTCCAGGTATAATAGA +
Preference number: 4 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTFCFFC*SSRYNR
Trigger: TCTATTATACCTGGAGGACCAGCAGAAAAAGCAAAA...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS GCA 90 bp GGGGCTCGCAGAGCTGCAGGGGCGTTGCGGAGGTCTTCCAGGAGCTaGTCAGCGGCCAGGAACAGGAGGGACCAGATTTCCTCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: GARRAAGALRRSSRS*SAARNRRDQISSSD
Trigger: GTCTGAGGAGGAAATCTGGTCCCTCCTGTTCCTGGCCGCTGAGCAGCTCCTGGAAGACCTCCGCAACGCCCCTGCAGCTCTGCGAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp CGAGTGCACAGATCCAGAGCTGAGCCTCCGGCCCGCCTGCTGGTCCTGGGGATCGGTAAAACTGGTGCCTaGTCAGGCTGTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: RVHRSRAEPPARLLVLGIGKTGA*SGCAGA
Trigger: TGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACC...GATCCCCAGGACCAGCAGGCGGGCCGGAGGCTCAGCTCTGGATCTGTGCACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCAGAGCTGCAGGGGCGTaGCGGAGGTCTTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFRAAGA*RRSSRS
Trigger: GCTCCTGGAAGACCTCCGCAACGCCCCTGCAGCTCT...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS TCA 90 bp GGAACAGGAGGGACCAGATTTCCTCCTCAGACAGAGCTTCACCCCTaGCCTGTAGGGCGCTGGCCAGCGTCACAGAGGACAGGCTCATGC +
Preference number: 5 (lower is better)
Translates to: GTGGTRFPPQTELHP*PVGRWPASQRTGSC
Trigger: GCATGAGCCTGTCCTCTGTGACGCTGGCCAGCGCCCTACAGGTCAGGGGTGAAGCTCTGTCTGAGGAGGAAATCTGGTCCCTCCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000305531.3
ENST00000374201.8
ENST00000486151.5
ENST00000636244.1
ENST00000637395.1
CDS GCA 90 bp GGCCTTCATCATGGGACAACTTTCCAACAAGGAGCAGGGGTCTCTTaGAAGTCTGTCCGCGGAGCTCCCTGCCACCAGCACTGTTGCCGC +
Preference number: 5 (lower is better)
Translates to: GLHHGTTFQQGAGVS*KSVRGAPCHQHCCR
Trigger: GCGGCAACAGTGCTGGTGGCAGGGAGCTCCGCGGACAGACTTGCAAGAGACCCCTGCTCCTTGTTGGAAAGTTGTCCCATGATGAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374201.8
ENST00000637395.1
CDS-3UTR CAA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCTCTGCTCCAGCCTCCTaGCTGCCGTCCACGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFSAPAS*LPSTLK
Trigger: CTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGA...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS TCA 90 bp CCTCCCCAGCTAAGGGAATCCCCACCTGCCCACCACTCTATCCCATaGCCTTACCTCCGACTGGCACTGTCTTCTGTATTCACCTGTTCG +
Preference number: 5 (lower is better)
Translates to: PPQLRESPPAHHSIP*PYLRLALSSVFTCS
Trigger: CGAACAGGTGAATACAGAAGACAGTGCCAGTCGGAGGTAAGGTCATGGGATAGAGTGGTGGGCAGGTGGGGATTCCCTTAGCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477710.1
CDS-3UTR CAA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCATCTCTAAGACCAGTCTaGCAACCTGCCCAGGACCCG +
Preference number: 5 (lower is better)
Translates to: GASLRLQPGPVERSSSRSSLRPV*QPAQDP
Trigger: CGGGTCCTGGGCAGGTTGCAAGACTGGTCTTAGAGA...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS GCA 90 bp GACAGGCCTTTCCCAGGGCACAGGACTCAGAAGTTGCAGAGTAGCTaGACAGCTTACCTGAGATGCATCAGGCTGCTCATCCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: DRPFPGHRTQKLQSS*TAYLRCIRLLILTL
Trigger: CAGAGTGAGGATGAGCAGCCTGATGCATCTCAGGTAAGCTGTGCAGCTACTCTGCAACTTCTGAGTCCTGTGCCCTGGGAAAGGCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGGTGAGTTCCTCGAGGTaGGCAAAGGATGTCACGGCA +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRVSSSR*AKDVTA
Trigger: TGCCGTGACATCCTTTGCCAACCTCGAGGAACTCAC...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS TCA 90 bp CAGGGCACAGGACTCAGAAGTTGCAGAGTAGCTGCACAGCTTACCTaGGATGCATCAGGCTGCTCATCCTCACTCTGTCCCTGTAGCAGT +
Preference number: 5 (lower is better)
Translates to: QGTGLRSCRVAAQLT*DASGCSSSLCPCSS
Trigger: ACTGCTACAGGGACAGAGTGAGGATGAGCAGCCTGATGCATCTCAGGTAAGCTGTGCAGCTACTCTGCAACTTCTGAGTCCTGTGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGAGCAGTTCAGGGGCCTaGAAAGGAGCAGCCTCTATA +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSSSGA*KGAASI
Trigger: TATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGCT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTCTGAGAAGGAGTTGTaGGCCATGAGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRSEKEL*AMSCLL
Trigger: CAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGCTGCCACCAGCACTGTaGCCGCTGTCTTTGTTTACT +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLPPAL*PLSLFT
Trigger: AGTAAACAAAGACAGCGGCAACAGTGCTGGTGGCAG...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR CAA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAAAGGAGCAGGGGTCTCTaGCAAGTCTGTCCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: PANRMNSGLENLLLLCRKRSRGL*QVCPRS
Trigger: GCTCCGCGGACAGACTTGCAAGAGACCCCTGCTCCT...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS TCA 90 bp AGTCCTCCCTTTCCAACCCGTCTTGCAGTTGTCTTGGGGGCCATGTaGCTGTGTTCAAATAAAACATGGGAAGGCTGCCCAGAGCCCATC +
Preference number: 5 (lower is better)
Translates to: SPPFPTRLAVVLGAM*LCSNKTWEGCPEPI
Trigger: GATGGGCTCTGGGCAGCCTTCCCATGTTTTATTTGAACACAGTCACATGGCCCCCAAGACAACTGCAAGACGGGTTGGAAAGGGAGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS CCA 90 bp GGCACACAGGAAGTCCTCCCTTTCCAACCCGTCTTGCAGTTGTCTTaGGGGCCATGTGACTGTGTTCAAATAAAACATGGGAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GTQEVLPFQPVLQLS*GPCDCVQIKHGKAA
Trigger: GGCAGCCTTCCCATGTTTTATTTGAACACAGTCACATGGCCCCCAAGACAACTGCAAGACGGGTTGGAAAGGGAGGACTTCCTGTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS-3UTR CAA 90 bp AGTGTCATCGGGGCCTCTCCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGAGCAGTATCTCTTCATaGCAGTACAGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SVIGASPANRMNSGLENLSSISS*QYSLSS
Trigger: GGAGGAGAGGCTGTACTGCAATGAAGAGATACTGCT...CAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGGAGAGGCCCCGATGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS TCA 90 bp CAGGCTGCTCATCCTCACTCTGTCCCTGTAGCAGTTCAGGGGCCTTaGAAGGAGCAGCCTCTATATGAGAAACACGGCCTTGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: QAAHPHSVPVAVQGP*KEQPLYEKHGLGKK
Trigger: TTTCTTTCCAAGGCCGTGTTTCTCATATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGCTACAGGGACAGAGTGAGGATGAGCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305531.3
ENST00000374201.8
ENST00000468556.1
ENST00000486151.5
ENST00000492045.1
ENST00000636244.1
CDS-3UTR CAA 90 bp TCCGAAGCTGCAGGTAAAACTGGTGCCTTGTCAGGCTGTGCTGGAGCAGCCCATTCTGGCCTGGAAAACTaGCTCCTTCTTTGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: SEAAGKTGALSGCAGAAHSGLEN*LLLCRK
Trigger: TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGA...ATGGGCTGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACCTGCAGCTTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGATCCTAACAGCCATGTaGAATGTGAAGCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRILTAM*NVKPSR
Trigger: TCTGGAGGGCTTCACATTCAACATGGCTGTTAGGAT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS TCA 90 bp CTCATGCCTGCGTCCTTCGTTAAAGGCTGCATCCAAAAGTCTCCGTaGCCAGGTCTAGGCCTTCATCATGGGACAACTTTCCAACAAGGA +
Preference number: 5 (lower is better)
Translates to: LMPASFVKGCIQKSP*PGLGLHHGTTFQQG
Trigger: TCCTTGTTGGAAAGTTGTCCCATGATGAAGGCCTAGACCTGGTCACGGAGACTTTTGGATGCAGCCTTTAACGAAGGACGCAGGCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374201.8
ENST00000486151.5
ENST00000637395.1
CDS GCA 90 bp GACTTTAATACACTGATCATCCACAACCCTCCACTGACGCACAACTaGAAGAAAATGCTCGGTCCCTTGGTTCCACACCCTGTAGCAGGC +
Preference number: 5 (lower is better)
Translates to: DFNTLIIHNPPLTHN*KKMLGPLVPHPVAG
Trigger: GCCTGCTACAGGGTGTGGAACCAAGGGACCGAGCATTTTCTTGCAGTTGTGCGTCAGTGGAGGGTTGTGGATGATCAGTGTATTAAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS CCA 90 bp GTTATGGCAAGGACCATGGTGTATCGTTACACTACTTCCTCTTCCTaGGCACACAGGAAGTCCTCCCTTTCCAACCCGTCTTGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: VMARTMVYRYTTSSS*AHRKSSLSNPSCSC
Trigger: ACAACTGCAAGACGGGTTGGAAAGGGAGGACTTCCTGTGTGCCCAGGAAGAGGAAGTAGTGTAACGATACACCATGGTCCTTGCCATAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS-3UTR CAA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAACCCTCTGAGAAGGAGTaGTTGGCCATGAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: PANRMNSGLENLLLLCRKPSEKE*LAMSCL
Trigger: CAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGG...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGTTGCTGCCGTCCACGTaGAAGTTATCCATTGATGTA +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRLLPST*KLSIDV
Trigger: TACATCAATGGATAACTTCAACGTGGACGGCAGCAA...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTGCATCTCTGAGACTTCAACCTGGACCCGTAGAGCGGTCATCCTCTCGATCATCCTCCTATTATTCTTaGAGCCTGCATGCATGCTCT +
Preference number: 5 (lower is better)
Translates to: GASLRLQPGPVERSSSRSSSYYS*SLHACS
Trigger: AGAGCATGCATGCAGGCTCAAAGAATAATAGGAGGA...TGATCGAGAGGATGACCGCTCTACGGGTCCAGGTTGAAGTCTCAGAGATGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGGAGCAGGGGTCTCTaGCAAGTCTGTCCGCGGAGC +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFRSRGL*QVCPRS
Trigger: GCTCCGCGGACAGACTTGCAAGAGACCCCTGCTCCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374201.8
CDS-3UTR CAA 90 bp TCTGCTGTTGTTTTTCACTTCATAGACTATGACACCCTTGGCACAGATCCCCAGGTGAGTTCCTCGAGGTaGGCAAAGGATGTCACGGCA +
Preference number: 5 (lower is better)
Translates to: SAVVFHFIDYDTLGTDPQVSSSR*AKDVTA
Trigger: TGCCGTGACATCCTTTGCCAACCTCGAGGAACTCAC...CTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp GCCAACCAGCCTTCTGATGTGGAGACCAGCAGGGGCTGGGTAGACAGACACTTCAGGAAAAAGAACTCTTaGCTTTTCATATACGCCAAG +
Preference number: 5 (lower is better)
Translates to: ANQPSDVETSRGWVDRHFRKKNS*LFIYAK
Trigger: CTTGGCGTATATGAAAAGCAAAGAGTTCTTTTTCCT...GAAGTGTCTGTCTACCCAGCCCCTGCTGGTCTCCACATCAGAAGGCTGGTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp TCTGCTGTTGTTTTTCACTTCATAGACTATGACACCCTTGGCACAGATCCCCAGGAGAGTCCCAGGTCATaGGCTTCTGGATCACACAGG +
Preference number: 5 (lower is better)
Translates to: SAVVFHFIDYDTLGTDPQESPRS*ASGSHR
Trigger: CCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTC...CTGGGGATCTGTGCCAAGGGTGTCATAGTCTATGAAGTGAAAAACAACAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS CCA 90 bp AATCCCCACCTGCCCACCACTCTATCCCATGACCTTACCTCCGACTaGCACTGTCTTCTGTATTCACCTGTTCGTTTAGATTGTATTCTC +
Preference number: 5 (lower is better)
Translates to: NPHLPTTLSHDLTSD*HCLLYSPVRLDCIL
Trigger: GAGAATACAATCTAAACGAACAGGTGAATACAGAAGACAGTGCCAGTCGGAGGTAAGGTCATGGGATAGAGTGGTGGGCAGGTGGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477710.1
CDS-3UTR CAA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTAAGGATGTCACGGCATaGAAGACAGCTCCCACTGTT +
Preference number: 5 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAKDVTA*KTAPTV
Trigger: AACAGTGGGAGCTGTCTTCAATGCCGTGACATCCTT...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGACTCAAATTGGCCATTaGCACAAACTTATCATGGTC +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRTQIGH*HKLIMV
Trigger: GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCCCTCTGAGAAGGAGTaGTTGGCCATGAGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFPSEKE*LAMSCL
Trigger: CAGACAGCTCATGGCCAACAACTCCTTCTCAGAGGG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGGAAGTGCTATGATAGAAGCAGCTGGAGCACCTTACCGAGCTCAGGAGACCGGAGGAAAAAGAACTCTTaGCTTTTCATATACGCCAAG +
Preference number: 5 (lower is better)
Translates to: RKCYDRSSWSTLPSSGDRRKKNS*LFIYAK
Trigger: CTTGGCGTATATGAAAAGCAAAGAGTTCTTTTTCCT...CCGGTCTCCTGAGCTCGGTAAGGTGCTCCAGCTGCTTCTATCATAGCACTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGGTAAAACTGGTGCCTaGTCAGGCTGTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFGKTGA*SGCAGA
Trigger: TGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATCTGCTCCAGCCTCCTaGCTGCCGTCCACGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTSAPAS*LPSTLK
Trigger: CTTCAACGTGGACGGCAGCAAGGAGGCTGGAGCAGA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTGAGAGTCCCAGGTCATaGGCTTCTGGATCACACAGG +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFESPRS*ASGSHR
Trigger: CCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTC...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTATCCTAACAGCCATGTaGAATGTGAAGCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAILTAM*NVKPSR
Trigger: TCTGGAGGGCTTCACATTCAACATGGCTGTTAGGAT...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCTCTAAGACCAGTCTaGCAACCTGCCCAGGACCCG +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFSLRPV*QPAQDP
Trigger: CGGGTCCTGGGCAGGTTGCAAGACTGGTCTTAGAGA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS GCA 90 bp AGAGGCTTAGACCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTaGACAAACTTATCATGGTCTGAATTTGGGGAGAAAAACATAGAC +
Preference number: 5 (lower is better)
Translates to: RGLDRAWCAGLKLAI*TNLSWSEFGEKNID
Trigger: GTCTATGTTTTTCTCCCCAAATTCAGACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635925.1
CDS-3UTR CAA 90 bp CCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTGCACAAACTTATCATGGTCACTCAAATTGGCCATTaGCACAAACTTATCATGGTC +
Preference number: 5 (lower is better)
Translates to: PGLVCRTQIGHLHKLIMVTQIGH*HKLIMV
Trigger: GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGT...GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTTTGCTGCCGTCCACGTaGAAGTTATCCATTGATGTA +
Preference number: 5 (lower is better)
Translates to: DSLGCNLQRESMAYSPPALLPST*KLSIDV
Trigger: TACATCAATGGATAACTTCAACGTGGACGGCAGCAA...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTCTCTAAGACCAGTCTaGCAACCTGCCCAGGACCCG +
Preference number: 5 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHSLRPV*QPAQDP
Trigger: CGGGTCCTGGGCAGGTTGCAAGACTGGTCTTAGAGA...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS TCA 90 bp GCTCAGAGAAGTGGACTTGCCCTTGTCCATGAGCTAGTAAGTTGTTaGCAAGAAATCCTGGGAATAAAACTCTTGAAACCCACTCTGGCT +
Preference number: 5 (lower is better)
Translates to: AQRSGLALVHELVSC*QEILGIKLLKPTLA
Trigger: AGCCAGAGTGGGTTTCAAGAGTTTTATTCCCAGGATTTCTTGTCAACAACTTACTAGCTCATGGACAAGGGCAAGTCCACTTCTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCTGAGAAGGAGTTGTaGGCCATGAGCTGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFSEKEL*AMSCLL
Trigger: CAGCAGACAGCTCATGGCCAACAACTCCTTCTCAGA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACAAAACTTGCTCCTTCTTaGCAGAAAACCCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTKLAPS*QKTPLR
Trigger: TCTCAGAGGGGTTTTCTGCAAAGAAGGAGCAAGTTT...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAGCAGTATCTCTTCATaGCAGTACAGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFSSISS*QYSLSS
Trigger: GGAGGAGAGGCTGTACTGCAATGAAGAGATACTGCT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTTGTGCAGGACTCAAATaGGCCATTTGCACAAACTTA +
Preference number: 5 (lower is better)
Translates to: DSLGCNLQRESMAYSPPACAGLK*AICTNL
Trigger: TAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACA...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATGAGAGTCCCAGGTCATaGGCTTCTGGATCACACAGG +
Preference number: 5 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHESPRS*ASGSHR
Trigger: CCTGTGTGATCCAGAAGCCAATGACCTGGGACTCTC...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GACTCGCTGGGATGTAATCTTCAACGTGAAAGTATGGCTTACTCTCCACCTGCTATCTGCCCTCCTGGTTaGATCGTTTTTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: DSLGCNLQRESMAYSPPAICPPG*IVFAFS
Trigger: AGAAAAAGCAAAAACGATCAAACCAGGAGGGCAGAT...AGCAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS GCA 90 bp GAGTTTAATACCAAACTCTCAATTAAGAGTGATACAGCAGACGGCTaGAGCCGTTATGGCAAGGACCATGGTGTATCGTTACACTACTTC +
Preference number: 5 (lower is better)
Translates to: EFNTKLSIKSDTADG*SRYGKDHGVSLHYF
Trigger: GAAGTAGTGTAACGATACACCATGGTCCTTGCCATAACGGCTGCAGCCGTCTGCTGTATCACTCTTAATTGAGAGTTTGGTATTAAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCATGAGAAACACGGCCTaGGAAAGAAAGGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFMRNTA*ERKASS
Trigger: GCTGGAAGCCTTTCTTTCCAAGGCCGTGTTTCTCAT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAGCAGTTCAGGGGCCTaGAAAGGAGCAGCCTCTATA +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTSSSGA*KGAASI
Trigger: TATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGCT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAAGGATGTCACGGCATaGAAGACAGCTCCCACTGTT +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFKDVTA*KTAPTV
Trigger: AACAGTGGGAGCTGTCTTCAATGCCGTGACATCCTT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGTGAGTTCCTCGAGGTaGGCAAAGGATGTCACGGCA +
Preference number: 5 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTVSSSR*AKDVTA
Trigger: TGCCGTGACATCCTTTGCCAACCTCGAGGAACTCAC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAGGTAAAACTGGTGCCTaGTCAGGCTGTGCTGGAGCA +
Preference number: 5 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTGKTGA*SGCAGA
Trigger: TGCTCCAGCACAGCCTGACAAGGCACCAGTTTTACC...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTATCCTAACAGCCATGTaGAATGTGAAGCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFILTAM*NVKPSR
Trigger: TCTGGAGGGCTTCACATTCAACATGGCTGTTAGGAT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTGGCCTGGAAAACTaGCTCCTTCTTTGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFSGLEN*LLLCRK
Trigger: TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp CCCTCATTAATGACAAACCCAAAACCACGATGTGGGTCACGTTTCAGTGTCACAAGACAGCTCCCACTGTaGATTCAACATCACATTTTA +
Preference number: 5 (lower is better)
Translates to: PSLMTNPKPRCGSRFSVTRQLPL*IQHHIL
Trigger: TAAAATGTGATGTTGAATCAACAGTGGGAGCTGTCT...TGTGACACTGAAACGTGACCCACATCGTGGTTTTGGGTTTGTCATTAATGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAAGGATGTCACGGCATaGAAGACAGCTCCCACTGTT +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTKDVTA*KTAPTV
Trigger: AACAGTGGGAGCTGTCTTCAATGCCGTGACATCCTT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp CCAGCCAACAGGATGAACTCTGGCCTGGAAAACTTGCTCCTTCTTTGCAGAAAAACTGAAACCGTAACATaGCAATTCTGCTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: PANRMNSGLENLLLLCRKTETVT*QFCCCF
Trigger: AAAACAACAGCAGAATTGCAATGTTACGGTTTCAGT...TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGAGTTCATCCTGTTGGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637395.1
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCCTCCTATTATTCTTaGAGCCTGCATGCATGCTCT +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFSSYYS*SLHACS
Trigger: AGAGCATGCATGCAGGCTCAAAGAATAATAGGAGGA...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAAACTTGCTCCTTCTTaGCAGAAAACCCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFKLAPS*QKTPLR
Trigger: TCTCAGAGGGGTTTTCTGCAAAGAAGGAGCAAGTTT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCTGGCCTGGAAAACTaGCTCCTTCTTTGCAGAAAA +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFSGLEN*LLLCRK
Trigger: TTTTCTGCAAAGAAGGAGCAAGTTTTCCAGGCCAGA...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAAGCAGTATCTCTTCATaGCAGTACAGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTSSISS*QYSLSS
Trigger: GGAGGAGAGGCTGTACTGCAATGAAGAGATACTGCT...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAAACTTGCTCCTTCTTaGCAGAAAACCCCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTKLAPS*QKTPLR
Trigger: TCTCAGAGGGGTTTTCTGCAAAGAAGGAGCAAGTTT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATTCCTCCTATTATTCTTaGAGCCTGCATGCATGCTCT +
Preference number: 5 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHSSYYS*SLHACS
Trigger: AGAGCATGCATGCAGGCTCAAAGAATAATAGGAGGA...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCATCTGCCCTCCTGGTTaGATCGTTTTTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFICPPG*IVFAFS
Trigger: AGAAAAAGCAAAAACGATCAAACCAGGAGGGCAGAT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTCTTTGGACAAGTTTATaGACTTCTTTGGAACCTCAG +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFLWTSL*TSLEPQ
Trigger: CTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAG...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp AGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCAGACAGCTCCCACTGTaGATTCAACATCACATTTTA +
Preference number: 5 (lower is better)
Translates to: RVGQTLDKFIDFFGTSVFRQLPL*IQHHIL
Trigger: TAAAATGTGATGTTGAATCAACAGTGGGAGCTGTCT...GAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACATGTGCAGGACTCAAATaGGCCATTTGCACAAACTTA +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTCAGLK*AICTNL
Trigger: TAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACA...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACATTGCTGCCGTCCACGTaGAAGTTATCCATTGATGTA +
Preference number: 5 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLLPST*KLSIDV
Trigger: TACATCAATGGATAACTTCAACGTGGACGGCAGCAA...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATATCTGCCCTCCTGGTTaGATCGTTTTTGCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHICPPG*IVFAFS
Trigger: AGAAAAAGCAAAAACGATCAAACCAGGAGGGCAGAT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GCAGAGTCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTAAGCGTCTAGGATTATaGGGACACGTAAATTACATA +
Preference number: 5 (lower is better)
Translates to: AESVRLWTSLLTSLEPQFKRLGL*GHVNYI
Trigger: TATGTAATTTACGTGTCCCAATAATCCTAGACGCTT...AAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGACTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATAGACAGCTCCCACTGTaGATTCAACATCACATTTTA +
Preference number: 5 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHRQLPL*IQHHIL
Trigger: TAAAATGTGATGTTGAATCAACAGTGGGAGCTGTCT...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAACTCAAATTGGCCATTaGCACAAACTTATCATGGTC +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTTQIGH*HKLIMV
Trigger: GACCATGATAAGTTTGTGCAAATGGCCAATTTGAGT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAACTGAAACCGTAACATaGCAATTCTGCTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTTETVT*QFCCCF
Trigger: AAAACAACAGCAGAATTGCAATGTTACGGTTTCAGT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACAAAGCGTCTAGGATTATaGGGACACGTAAATTACATA +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTKRLGL*GHVNYI
Trigger: TATGTAATTTACGTGTCCCAATAATCCTAGACGCTT...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp GGTCAAGAAGCGTCTAGGATTATTGGGACACGTAAATTACATAATTCTGACACACCTCAGTTTTCTCATTaGACAAAACTAGATGGTCAA +
Preference number: 5 (lower is better)
Translates to: GQEASRIIGTRKLHNSDTPQFSH*TKLDGQ
Trigger: TTGACCATCTAGTTTTGTCAAATGAGAAAACTGAGG...TGTGTCAGAATTATGTAATTTACGTGTCCCAATAATCCTAGACGCTTCTTGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TCGGTCAGACTTTGGACAAGTTTATTGACTTCTTTGGAACCTCAGTTTTCTCATCCTCAGTTTTCTCATTaGACAAAACTAGATGGTCAA +
Preference number: 5 (lower is better)
Translates to: SVRLWTSLLTSLEPQFSHPQFSH*TKLDGQ
Trigger: TTGACCATCTAGTTTTGTCAAATGAGAAAACTGAGG...ATGAGAAAACTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAGTCTGACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACACTTTGGACAAGTTTATaGACTTCTTTGGAACCTCAG +
Preference number: 5 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTLWTSL*TSLEPQ
Trigger: CTGAGGTTCCAAAGAAGTCAATAAACTTGTCCAAAG...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAAGGAAAAAGAACTCTTaGCTTTTCATATACGCCAAG +
Preference number: 5 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTRKKNS*LFIYAK
Trigger: CTTGGCGTATATGAAAAGCAAAGAGTTCTTTTTCCT...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS-3UTR CAA 90 bp TTTTCTCATTTGACAAAACTAGATGGTCAAGAAGCGTCTAGGATTATTGGGACAACTGAAACCGTAACATaGCAATTCTGCTGTTGTTTT +
Preference number: 5 (lower is better)
Translates to: FSHLTKLDGQEASRIIGTTETVT*QFCCCF
Trigger: AAAACAACAGCAGAATTGCAATGTTACGGTTTCAGT...TGTCCCAATAATCCTAGACGCTTCTTGACCATCTAGTTTTGTCAAATGAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305531.3
ENST00000374201.8
CDS TCA 90 bp CACTGTCTTCTGTATTCACCTGTTCGTTTAGATTGTATTCTCCACTaGGCAATAAGATTAGGTGTTCATAAGCTTAACAATAGCAACTAT +
Preference number: 5 (lower is better)
Translates to: HCLLYSPVRLDCILH*AIRLGVHKLNNSNY
Trigger: ATAGTTGCTATTGTTAAGCTTATGAACACCTAATCTTATTGCTCAGTGGAGAATACAATCTAAACGAACAGGTGAATACAGAAGACAGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474573.5
ENST00000477710.1
CDS GCA 72 bp GGCATGTCCCCAGCCCAAGCACTGGTACAAGGCGGGTaGTCAGCAACTGCTCACGTGGGATGCACCACTATC +
Preference number: 6 (lower is better)
Translates to: GMSPAQALVQGG*SATAHVGCTTI
Trigger: GATAGTGGTGCATCCCACGTGAGCAGTTGCTGAGCACCCGCCTTGTACCAGTGCTTGGGCTGGGGACATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477710.1
CDS GCA 72 bp CATGGGACAACTTTCCAACAAGGAGCAGGGGTCTCTTaGAAGTCTGTCCGCGGAGCTCCCTGCCACCAGCAC +
Preference number: 6 (lower is better)
Translates to: HGTTFQQGAGVS*KSVRGAPCHQH
Trigger: GTGCTGGTGGCAGGGAGCTCCGCGGACAGACTTGCAAGAGACCCCTGCTCCTTGTTGGAAAGTTGTCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374201.8
ENST00000486151.5
ENST00000637395.1
CDS TCA 72 bp CTAAGGGAATCCCCACCTGCCCACCACTCTATCCCATaGCCTTACCTCCGACTGGCACTGTCTTCTGTATTC +
Preference number: 6 (lower is better)
Translates to: LRESPPAHHSIP*PYLRLALSSVF
Trigger: GAATACAGAAGACAGTGCCAGTCGGAGGTAAGGTCATGGGATAGAGTGGTGGGCAGGTGGGGATTCCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477710.1
CDS CCA 72 bp TACAGCAGACGGCTGCAGCCGTTATGGCAAGGACCATaGTGTATCGTTACACTACTTCCTCTTCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: YSRRLQPLWQGP*CIVTLLPLPGH
Trigger: GTGCCCAGGAAGAGGAAGTAGTGTAACGATACACCATGGTCCTTGCCATAACGGCTGCAGCCGTCTGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS TCA 72 bp CATCCTCACTCTGTCCCTGTAGCAGTTCAGGGGCCTTaGAAGGAGCAGCCTCTATATGAGAAACACGGCCTT +
Preference number: 6 (lower is better)
Translates to: HPHSVPVAVQGP*KEQPLYEKHGL
Trigger: AAGGCCGTGTTTCTCATATAGAGGCTGCTCCTTTCAAGGCCCCTGAACTGCTACAGGGACAGAGTGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000305531.3
ENST00000374201.8
ENST00000468556.1
ENST00000486151.5
ENST00000492045.1
ENST00000636244.1
CDS GCA 72 bp ACACTGATCATCCACAACCCTCCACTGACGCACAACTaGAAGAAAATGCTCGGTCCCTTGGTTCCACACCCT +
Preference number: 6 (lower is better)
Translates to: TLIIHNPPLTHN*KKMLGPLVPHP
Trigger: AGGGTGTGGAACCAAGGGACCGAGCATTTTCTTGCAGTTGTGCGTCAGTGGAGGGTTGTGGATGATCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS CAA 90 bp AGAAATCCTGGGAATAAAACTCTTGAAACCCACTCTGGCTTGGTGTaGAGAACCAAGCTCTGCAAGGCTGAGCTGGGAGCTGGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: RNPGNKTLETHSGLV*RTKLCKAELGAGEA
Trigger: AGCCTCCCCAGCTCCCAGCTCAGCCTTGCAGAGCTTGGTTCTCAACACCAAGCCAGAGTGGGTTTCAAGAGTTTTATTCCCAGGATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS TCA 72 bp GCGTCCTTCGTTAAAGGCTGCATCCAAAAGTCTCCGTaGCCAGGTCTAGGCCTTCATCATGGGACAACTTTC +
Preference number: 6 (lower is better)
Translates to: ASFVKGCIQKSP*PGLGLHHGTTF
Trigger: GAAAGTTGTCCCATGATGAAGGCCTAGACCTGGTCACGGAGACTTTTGGATGCAGCCTTTAACGAAGGACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374201.8
ENST00000486151.5
ENST00000637395.1
CDS CAA 72 bp GGGAATAAAACTCTTGAAACCCACTCTGGCTTGGTGTaGAGAACCAAGCTCTGCAAGGCTGAGCTGGGAGCT +
Preference number: 6 (lower is better)
Translates to: GNKTLETHSGLV*RTKLCKAELGA
Trigger: AGCTCCCAGCTCAGCCTTGCAGAGCTTGGTTCTCAACACCAAGCCAGAGTGGGTTTCAAGAGTTTTATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS CAA 90 bp TTGACAAGAAATCCTGGGAATAAAACTCTTGAAACCCACTCTGGCTaGGTGTTGAGAACCAAGCTCTGCAAGGCTGAGCTGGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LTRNPGNKTLETHSG*VLRTKLCKAELGAG
Trigger: CCCAGCTCCCAGCTCAGCCTTGCAGAGCTTGGTTCTCAACACCAAGCCAGAGTGGGTTTCAAGAGTTTTATTCCCAGGATTTCTTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS CAA 90 bp TTCCTCTTCCTGGGCACACAGGAAGTCCTCCCTTTCCAACCCGTCTaGCAGTTGTCTTGGGGGCCATGTGACTGTGTTCAAATAAAACAT +
Preference number: 6 (lower is better)
Translates to: FLFLGTQEVLPFQPV*QLSWGPCDCVQIKH
Trigger: ATGTTTTATTTGAACACAGTCACATGGCCCCCAAGACAACTGCAAGACGGGTTGGAAAGGGAGGACTTCCTGTGTGCCCAGGAAGAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS TCA 72 bp ACCAGCAGCTACTGCTTGAAAAGCACGGTTCTCTACTaGCCTCAGAAATGGTACCCAGAACCAAGCCAACCA +
Preference number: 6 (lower is better)
Translates to: TSSYCLKSTVLY*PQKWYPEPSQP
Trigger: TGGTTGGCTTGGTTCTGGGTACCATTTCTGAGGTCAGTAGAGAACCGTGCTTTTCAAGCAGTAGCTGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468556.1
CDS CCA 72 bp CTGCCCACCACTCTATCCCATGACCTTACCTCCGACTaGCACTGTCTTCTGTATTCACCTGTTCGTTTAGAT +
Preference number: 6 (lower is better)
Translates to: LPTTLSHDLTSD*HCLLYSPVRLD
Trigger: ATCTAAACGAACAGGTGAATACAGAAGACAGTGCCAGTCGGAGGTAAGGTCATGGGATAGAGTGGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477710.1
CDS CCA 72 bp GAAGTCCTCCCTTTCCAACCCGTCTTGCAGTTGTCTTaGGGGCCATGTGACTGTGTTCAAATAAAACATGGG +
Preference number: 6 (lower is better)
Translates to: EVLPFQPVLQLS*GPCDCVQIKHG
Trigger: CCCATGTTTTATTTGAACACAGTCACATGGCCCCCAAGACAACTGCAAGACGGGTTGGAAAGGGAGGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS TCA 72 bp ACTCTCCACTTTTCATATACGCCAAGCCAAAGTAGGTaGGTTCCTCGAGGTTGGCAAAGGATGTCACGGCAT +
Preference number: 6 (lower is better)
Translates to: TLHFSYTPSQSR*VPRGWQRMSRH
Trigger: ATGCCGTGACATCCTTTGCCAACCTCGAGGAACTCACCTACTTTGGCTTGGCGTATATGAAAAGTGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486151.5
CDS GCA 72 bp GACCGGGCCTGGTGTGCAGGACTCAAATTGGCCATTTaGACAAACTTATCATGGTCTGAATTTGGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: DRAWCAGLKLAI*TNLSWSEFGEK
Trigger: TTTCTCCCCAAATTCAGACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635925.1
CDS CAA 72 bp AATCCTGGGAATAAAACTCTTGAAACCCACTCTGGCTaGGTGTTGAGAACCAAGCTCTGCAAGGCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: NPGNKTLETHSG*VLRTKLCKAEL
Trigger: CAGCTCAGCCTTGCAGAGCTTGGTTCTCAACACCAAGCCAGAGTGGGTTTCAAGAGTTTTATTCCCAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS CAA 72 bp ACACAGGAAGTCCTCCCTTTCCAACCCGTCTTGCAGTaGTCTTGGGGGCCATGTGACTGTGTTCAAATAAAA +
Preference number: 6 (lower is better)
Translates to: TQEVLPFQPVLQ*SWGPCDCVQIK
Trigger: TTTTATTTGAACACAGTCACATGGCCCCCAAGACAACTGCAAGACGGGTTGGAAAGGGAGGACTTCCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS CAA 90 bp ATCCAAATGAGAGGCTTAGACCGGGCCTGGTGTGCAGGACTCAAATaGGCCATTTGCACAAACTTATCATGGTCTGAATTTGGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: IQMRGLDRAWCAGLK*AICTNLSWSEFGEK
Trigger: TTTCTCCCCAAATTCAGACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCTCATTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635925.1
CDS GCA 72 bp ACCAAACTCTCAATTAAGAGTGATACAGCAGACGGCTaGAGCCGTTATGGCAAGGACCATGGTGTATCGTTA +
Preference number: 6 (lower is better)
Translates to: TKLSIKSDTADG*SRYGKDHGVSL
Trigger: TAACGATACACCATGGTCCTTGCCATAACGGCTGCAGCCGTCTGCTGTATCACTCTTAATTGAGAGTTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505547.1
CDS CAA 72 bp AGAGGCTTAGACCGGGCCTGGTGTGCAGGACTCAAATaGGCCATTTGCACAAACTTATCATGGTCTGAATTT +
Preference number: 6 (lower is better)
Translates to: RGLDRAWCAGLK*AICTNLSWSEF
Trigger: AAATTCAGACCATGATAAGTTTGTGCAAATGGCCAATTTGAGTCCTGCACACCAGGCCCGGTCTAAGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635925.1
CDS CCA 72 bp CAGACTCGCTGGGATGTAATCTTCAACGTGAAAGTATaGCTTACTCTCCACCTCCTTAGGGTAATTGCCAAA +
Preference number: 6 (lower is better)
Translates to: QTRWDVIFNVKV*LTLHLLRVIAK
Trigger: TTTGGCAATTACCCTAAGGAGGTGGAGAGTAAGCCATACTTTCACGTTGAAGATTACATCCCAGCGAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305531.3
CDS TCA 72 bp AGTGGACTTGCCCTTGTCCATGAGCTAGTAAGTTGTTaGCAAGAAATCCTGGGAATAAAACTCTTGAAACCC +
Preference number: 6 (lower is better)
Translates to: SGLALVHELVSC*QEILGIKLLKP
Trigger: GGGTTTCAAGAGTTTTATTCCCAGGATTTCTTGTCAACAACTTACTAGCTCATGGACAAGGGCAAGTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492045.1
CDS TCA 72 bp CTGTATTCACCTGTTCGTTTAGATTGTATTCTCCACTaGGCAATAAGATTAGGTGTTCATAAGCTTAACAAT +
Preference number: 6 (lower is better)
Translates to: LYSPVRLDCILH*AIRLGVHKLNN
Trigger: ATTGTTAAGCTTATGAACACCTAATCTTATTGCTCAGTGGAGAATACAATCTAAACGAACAGGTGAATACAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474573.5
ENST00000477710.1