RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMPD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070601

Ensembl transcript IDs: ENST00000359927.3, ENST00000377765.8, ENST00000539465.5

Found 368 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCCGCTGCCTCCCTGTaGCGGGCGGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPAASL*RAEQRL
Trigger: TAGCCGCTGCTCCGCCCGGCACAGGGAGGCAGCGGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGAACACGGCGGCCGTaGGGGCCGTGCACTGACGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARTRRP*GPCTDG
Trigger: CCCGTCAGTGCACGGCCCTCACGGCCGCCGTGTTCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTCAGGTTCCCCGCTaGCTCCCTGTGCCGGGCGGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPQVPR*LPVPGG
Trigger: TCCGCCCGGCACAGGGAGGCAGCGGGGAACCTGAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCGGTGGTGCAGCTGTaGGCTCGGGCAGGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAVVQL*ARAGLQ
Trigger: CTGGAGGCCTGCCCGAGCCCACAGCTGCACCACCGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCGGCACTGTCTGTCGTaGTGCTGGCCCCGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARHCLS*CWPRRC
Trigger: GCACCTGCGGGGCCAGCAGCACGACAGACAGTGCCG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGCGGGGCTCCCCCTTaGCGGGAAGCTGTACTCTCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGGAPP*REAVLS
Trigger: CGAGAGTACAGCTTCCCGGCAAGGGGGAGCCCCGCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACAGGGGTGCGGTGGTaGAGCTGTGGGCTCGGGCAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATGVRW*SCGLGQ
Trigger: CTGCCCGAGCCCACAGCTGCACCACCGCACCCCTGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTCTGTCGTGCTGCTaGCCCCGCAGGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACLSCC*PRRCWG
Trigger: GCCCCAGCACCTGCGGGGCCAGCAGCACGACAGACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCGACAGGGGTGCGGTaGTGCAGCTGTGGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASTGVR*CSCGLG
Trigger: CCCGAGCCCACAGCTGCACCACCGCACCCCTGTCGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAGGACCTAGCGGGCTaGCGCTCTCGGAGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKDLAG*RSRRRA
Trigger: CGCCCTTCTCCGAGAGCGTCAGCCCGCTAGGTCCTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377765.8
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGGGGCCTGGGGGAGTaGGCTTATCAGCCGCGTCAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGGLGE*AYQPRH
Trigger: ATGACGCGGCTGATAAGCTCACTCCCCCAGGCCCCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGCGGGCCCATCAGCTaGAGCAACTTTAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGGPIS*SNFSPG
Trigger: GCCCGGGCTAAAGTTGCTGCAGCTGATGGGCCCGCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTACCTGCAGAGGAGGTaGCGCCCGCGCGGACAAGGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYLQRR*RPRGQG
Trigger: TCCTTGTCCGCGCGGGCGGCACCTCCTCTGCAGGTA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377765.8
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCACTGTCTGTCGTGCTaGTGGCCCCGCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAHCLSC*WPRRCW
Trigger: CCAGCACCTGCGGGGCCAGCAGCACGACAGACAGTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAGGCCAGTGGTGGGTaGAGGGCCAGGGGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKASGG*RARGSS
Trigger: GCTGGAACCCCTGGCCCTGCACCCACCACTGGCCTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCACGCACGGCCCCCTaGATCTCTTCGGGGGACTGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASRTAP*ISSGDW
Trigger: CCAGTCCCCCGAAGAGATGCAGGGGGCCGTGCGTGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCCATCCCAGGACACTaGTCCCGGGCCTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASIPGH*SRASQH
Trigger: GTGCTGGGAGGCCCGGGAGCAGTGTCCTGGGATGGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCGCGGCTCTCAGTGTTaGCTGAGTCGGACGCCTCGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARGSQC*LSRTPR
Trigger: CCGAGGCGTCCGACTCAGCCAACACTGAGAGCCGCG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCACAGGCCGGCCAGCTaGACCAGGTGCTGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAHRPAS*TRCWKV
Trigger: CACCTTCCAGCACCTGGTCCAGCTGGCCGGCCTGTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACAGGGATGAGGGTCTaGGTTGGGTTCCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATGMRV*VGFLAG
Trigger: GCCCGCCAGGAACCCAACTCAGACCCTCATCCCTGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCTCTCAGTGTTGGCTaGGTCGGACGCCTCGGACTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAALSVG*VGRLGL
Trigger: GAGTCCGAGGCGTCCGACTCAGCCAACACTGAGAGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGTGAGGGCCGTGCACTaGCGGGCCAGGAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAVRAVH*RARSFT
Trigger: TGTGAAACTCCTGGCCCGTCAGTGCACGGCCCTCAC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGGCCCTTGGGCCGTTaGCCTGTTTACAGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARPLGR*PVYRAV
Trigger: CACGGCCCTGTAAACAGGTCAACGGCCCAAGGGCCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCACAGTTGGGGAGGGTaGACCAAGGGCCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAHSWGG*TKGQVG
Trigger: CCCTACCTGGCCCTTGGTGCACCCTCCCCAACTGTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTTCCTCGACAGGGGTaGGGTGGTGCAGCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFPRQG*GGAAVG
Trigger: GCCCACAGCTGCACCACCGCACCCCTGTCGAGGAAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCTTCTGGGAGCCCATaGAGAGGCGGCTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAASGSP*RGGSGF
Trigger: AAAGCCGGAGCCGCCTCTGCATGGGCTCCCAGAAGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCCAGCTGGACCAGGTaGTGGAAGGTGTCACGCACG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAASWTR*WKVSRT
Trigger: CGTGCGTGACACCTTCCAGCACCTGGTCCAGCTGGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGGGGTTGGCTCTCTaGGCCAGGTCCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWGLAL*ARSRRQ
Trigger: CTGTCTCCTGGACCTGGCCCAGAGAGCCAACCCCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTGGCACTGGGGGTTaGCTCTCTGGGCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASGTGG*LSGPGP
Trigger: TGGACCTGGCCCAGAGAGCCAACCCCCAGTGCCAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGCATGGAACTGGGCTaGGCCTCAGTCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASMELG*ASVQPC
Trigger: GCAGGGCTGGACTGAGGCCCAGCCCAGTTCCATGCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCAGGGGTTCCAGCATaGAACTGGGCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPGVPA*NWAGPQ
Trigger: CTGAGGCCCAGCCCAGTTCCATGCTGGAACCCCTGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATCCTCAAAGGCCAGTaGTGGGTGCAGGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAILKGQ*WVQGQG
Trigger: CCCCTGGCCCTGCACCCACCACTGGCCTTTGAGGAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCCTCCCCTCCTGCTTaGCTGTCTTCCATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPSPPA*LSSIWP
Trigger: GGGCCAGATGGAAGACAGCCAAGCAGGAGGGGAGGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTCGACAGGAGCTTCTaGGAGCCCATGCAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALDRSF*EPMQRR
Trigger: CCGCCTCTGCATGGGCTCCCAGAAGCTCCTGTCGAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGCTGGACCAGGTGCTaGAAGGTGTCACGCACGGCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASWTRC*KVSRTA
Trigger: GGCCGTGCGTGACACCTTCCAGCACCTGGTCCAGCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGGTGGTATCTCTGTaGCACGGGCCCCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWVVSL*HGPPPH
Trigger: GTGAGGAGGGGGCCCGTGCCACAGAGATACCACCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGGAAAAGCTTGCCGTaGGCAGAGCCTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGKSLP*AEPPAV
Trigger: CACAGCAGGAGGCTCTGCTCACGGCAAGCTTTTCCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTCAGAGGACTCCTCTaGGTCACTGCAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALRGLL*VTAGPG
Trigger: TCCAGGGCCTGCAGTGACTCAGAGGAGTCCTCTGAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCTCTTCCATTTACCTaGAGAGGAGGTGCCGCCCGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAALPFT*RGGAAR
Trigger: GCGGGCGGCACCTCCTCTGCAGGTAAATGGAAGAGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377765.8
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGTGCAGCCGGGAGATaGTGTACTGCTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGAAGR*CTALPG
Trigger: CCCTGGAAGAGCAGTACAGCATCTCCCGGCTGCACC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGCTGTCAGAGTCAATaGTCTCTGCGAGGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGCQSQ*SLRGLA
Trigger: CGCCAGGCCTCGCAGAGAGCATTGACTCTGACAGCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGGCCAGGCTCACCCTaGATGTCCTGCAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARPGSP*MSCRED
Trigger: GTCCTCTCTGCAGGACATGCAGGGTGAGCCTGGCCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCCCTGGGGGTTCTCTaGTCTGTCCTTGAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAALGVL*SVLEGL
Trigger: GAGACCCTCAAGGACAGAGCAGAGAACCCCCAGGGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCCTCTGTCTCAGGCTaGGGGCCACGGAAGCATGTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASSVSG*GPRKHV
Trigger: CACATGCTTCCGTGGCCCGCAGCCTGAGACAGAGGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTGAGTTGGGTTCCTaGCGGGCCCATCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASELGS*RAHQLQ
Trigger: CTGCAGCTGATGGGCCCGCCAGGAACCCAACTCAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGATGAGGGTCTGAGTTaGGTTCCTGGCGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADEGLS*VPGGPI
Trigger: GATGGGCCCGCCAGGAACCCAACTCAGACCCTCATC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACTCACTCGAGCCACTaGTCCTGTAGCCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATHSSH*SCSRGS
Trigger: AGAGCCGCGGCTACAGGACCAGTGGCTCGAGTGAGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGTCTCTAGGGGGATGTaGTGGGATCTGCTCGGTCCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAVSRGM*WDLLGP
Trigger: GGGACCGAGCAGATCCCACCACATCCCCCTAGAGAC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGGTGGGTGGGAGAGTaGAAGGGGCTTCTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGWVGE*KGLLRE
Trigger: TTCCCTGAGAAGCCCCTTCCACTCTCCCACCCACCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTGTCGCACAGGGATaGGGGTCTGAGTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACVAQG*GSELGS
Trigger: GGAACCCAACTCAGACCCTCATCCCTGTGCGACACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGGAAGGCCTTGCCTaGGCAGTATCTGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWEGLA*AVSGPD
Trigger: ATCTGGCCCAGATACTGCTCAGGCAAGGCCTTCCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACCCGGGGAGTCACCTaGATCCTTCCTAGACTCCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATRGVT*ILPRLL
Trigger: GAGGAGTCTAGGAAGGATTCAGGTGACTCCCCGGGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGAGGGACGGCTGGTaGAACTGTCTGCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWRDGW*NCLLPK
Trigger: CTTGGGAAGCAGACAGTTTCACCAGCCGTCCCTCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGGACTGGTCCATTCTaGTCACATGCCGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGTGPF*SHADSS
Trigger: CGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTACAGTCTGTGAACTaGAAGCACAGGCCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALQSVN*KHRPAS
Trigger: GCTGGCCGGCCTGTGCTTTCAGTTCACAGACTGTAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGCGGCTACAGTCTGTaGACTGAAAGCACAGGCCGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASGYSL*TESTGR
Trigger: CCGGCCTGTGCTTTCAGTTCACAGACTGTAGCCGCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTCCTCACAGGAGCATaGCCCTCCTCATCTGCGGAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALLTGA*PSSSAD
Trigger: ATCCGCAGATGAGGAGGGTCATGCTCCTGTGAGGAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCAGTGGCACAGAGCTaGAGGGACTCTTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPVAQS*RDSSSE
Trigger: TTCCGAGGAAGAGTCCCTTCAGCTCTGTGCCACTGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCACCAGGGAAAAGCTTaGCGTGAGCAGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAHQGKA*REQSLL
Trigger: CAGGAGGCTCTGCTCACGGCAAGCTTTTCCCTGGTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCGGGAGATGCTGTACTaGTCTTCCAGGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAREMLY*SSRASA
Trigger: TGCACTGGCCCTGGAAGAGCAGTACAGCATCTCCCG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTTCGTGCAGCAGGTaGAGCCGGGAGATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASSCSR*SREMLY
Trigger: GTACAGCATCTCCCGGCTGCACCTGCTGCACGAAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATGAGTTCCTCTTCGTaGAGCAGGTGCAGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAMSSSS*SRCSRE
Trigger: CTCCCGGCTGCACCTGCTGCACGAAGAGGAACTCAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATCCGTTCCTGGATGTaGAGAGCCGCGAGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAIRSWM*RAASRS
Trigger: ACTCCGACTCGCGGCTCTGCACATCCAGGAACGGAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACAGCAAAGCGCTCCTaGAGCACATCGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATAKRS*STSLQL
Trigger: GAGCTGCAGCGATGTGCTCCAGGAGCGCTTTGCTGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTTCCAGAGCGTCCATaGACTCACTCGAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALPERP*THSSHW
Trigger: CCAGTGGCTCGAGTGAGTCCATGGACGCTCTGGAAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTGGCGAGCCAAAGTaGAAGAAGGTGGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPGEPK*KKVDLL
Trigger: CAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCTCTCTGCGAGGCCTaGCGAGCCAAAGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAALCEA*RAKVEE
Trigger: TTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGAGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTCACTCAGGTAGCTaGCCGGGGAGACACTGGAAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACHSGS*PGRHWN
Trigger: GTTCCAGTGTCTCCCCGGCCAGCTACCTGAGTGACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGCTTGCTGAGGAGCTaGCAGCAGGGACAACACCAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACLLRS*QQGQHQ
Trigger: CTGGTGTTGTCCCTGCTGCCAGCTCCTCAGCAAGCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCAGGCAGGCTCTGTCTaGGTTAGGGTCACCACTGGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAQAGSV*VRVTTG
Trigger: TCCAGTGGTGACCCTAACCCAGACAGAGCCTGCCTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTAGTCCTGGGTTGCTaGCCAGGCAGGCTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALVLGC*PGRLCL
Trigger: CAGACAGAGCCTGCCTGGCCAGCAACCCAGGACTAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTAGGGGGATGTGGTaGGATCTGCTCGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASRGMW*DLLGPC
Trigger: ACAGGGACCGAGCAGATCCCACCACATCCCCCTAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCTGTCTCAGTGCCCTaGAGCAGTACTCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAVSVP*SSTLAR
Trigger: TCTGGCCAGAGTACTGCTCCAGGGCACTGAGACAGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTGTTTACAGGGCCGTaGATGCCCGGAACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALFTGP*MPGTSG
Trigger: CCCAGAAGTTCCGGGCATCCACGGCCCTGTAAACAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGGGCAGGAGGCCCTTaGGCCGTTGACCTGTTTACA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARAGGP*AVDLFT
Trigger: TGTAAACAGGTCAACGGCCCAAGGGCCTCCTGCCCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGTGGGCAAAGTTGGGTaGTATCTCTGTGGCACGGGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAVGKVG*YLCGTG
Trigger: GCCCGTGCCACAGAGATACCACCCAACTTTGCCCAC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTACCACCTGCTGGATaGGTTCCTCTTCGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALPPAG*VPLRAA
Trigger: TGCTGCACGAAGAGGAACTCATCCAGCAGGTGGTAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCAGCGGTAGTCATGTaGCTCCTCCCTTTCTACCAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAAVVM*LLPFYH
Trigger: GTGGTAGAAAGGGAGGAGTCACATGACTACCGCTGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCTGCTCCTCCTTTATaGGTGATCTGCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAAPPL*VICRVP
Trigger: TGGCACCCTGCAGATCACTCATAAAGGAGGAGCAGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGCACCAGGGGAAATaGGACCTGAGAGGTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWHQGK*DLRGVV
Trigger: GACTACACCTCTCAGGTCTCATTTCCCCTGGTGCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTGGGTTAGAACAGTaGGGAGTGCTTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPGLEQ*GVLAEE
Trigger: CTCCTCAGCAAGCACTCCTCACTGTTCTAACCCAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTCTGCTCTGTCCTTaGGGGTCTCTAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASLLCP*GSLGGC
Trigger: ACATCCCCCTAGAGACCCTCAAGGACAGAGCAGAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAGATGTGGCCACCCTaGGACTGGCAGAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKMWPP*DWQRLQ
Trigger: CTGAAGTCTCTGCCAGTCTCAGGGTGGCCACATCTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTGGAGCACATCGCTaGAGCTCTGCAGATAGAGGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPGAHR*SSADRG
Trigger: ACCTCTATCTGCAGAGCTGCAGCGATGTGCTCCAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGAAGAAGGTGGACCTaGTGGAGGAGCAGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGRRWT*WRSRCL
Trigger: TAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCACCCTGCATGTCCTaGAGAGAGGACACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASPCMS*REDTVG
Trigger: CCCAACTGTGTCCTCTCTGCAGGACATGCAGGGTGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGAGGCTGGGTTTGTaGTCTTGGTCTCCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWRLGL*SWSPSE
Trigger: CTCTGAGGGAGACCAAGAGCACAAACCCAGCCTCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGATTTGGGAAGGCCTTaGCTGAGCAGTATCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADLGRP*LSSIWA
Trigger: GGCCCAGATACTGCTCAGGCAAGGCCTTCCCAAATC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGATGTGGTGGGATCTaGTCGGTCCCTGTTACAGGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGCGGI*SVPVTG
Trigger: TCCTGTAACAGGGACCGAGCAGATCCCACCACATCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATGGTTAGGTGCCTCTaGCTTGATCCCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAMVRCL*LDPLWR
Trigger: CCTCCAGAGGGGATCAAGGCAGAGGCACCTAACCAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCGGCTTTCGGTAAAGTaGCAGGTGCACTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARLSVK*QVHFSG
Trigger: CCCAGAGAAGTGCACCTGGCACTTTACCGAAAGCCG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTACAGGGCCGTGGATaGCCGGAACTTCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALQGRG*PELLGQ
Trigger: TTGACCCAGAAGTTCCGGGCATCCACGGCCCTGTAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATGACCCTCCTCATCTaGGGATACTGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAMTLLI*GYWAAA
Trigger: TGCAGCTGCCCAGTATCCGCAGATGAGGAGGGTCAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCACCTTCACGGGGTTaGTCTTCAGTCTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAPSRG*SSVWLS
Trigger: AGAGAGCCAGACTGAAGACCAACCCCGTGAAGGTGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCAAAGTGGAAGAAGGTaGACCTGCTGGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAQSGRR*TCWRSR
Trigger: CCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCGCTTCTCTCCTCCTaGCTGTCAGAGTCAATGCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPLLSS*LSESML
Trigger: GAGCATTGACTCTGACAGCCAGGAGGAGAGAAGCGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGCCGGGGAGACACTaGAACACAGGCTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWPGRH*NTGCSS
Trigger: ACTACTACAGCCTGTGTTCCAGTGTCTCCCCGGCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGCTGTCTTCCATCTaGCCCACAAGGCAGGCTGTT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWLSSI*PTRQAV
Trigger: AACAGCCTGCCTTGTGGGCCAGATGGAAGACAGCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTGGGTTTGTGCTCTTaGTCTCCCTCAGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALGLCS*SPSEEP
Trigger: TGGCTCCTCTGAGGGAGACCAAGAGCACAAACCCAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGCCACGGAAGCATGTaGCATAGGAGAACTGACAGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGHGSM*HRRTDS
Trigger: GCTGTCAGTTCTCCTATGCCACATGCTTCCGTGGCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGATGCCCGGAACTTCTaGGTCAAACAGAACACGGCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADARNF*VKQNTA
Trigger: CGCCGTGTTCTGTTTGACCCAGAAGTTCCGGGCATC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTCATCTGCGGATACTaGGCAGCTGCAGCTATGCCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALICGY*AAAAMP
Trigger: AGGCATAGCTGCAGCTGCCCAGTATCCGCAGATGAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGACTGCCAGGCCATGTaGGCAAAGTTGGGTGGTATC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADCQAM*AKLGGI
Trigger: GATACCACCCAACTTTGCCCACATGGCCTGGCAGTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACTCCTCTGAGTCACTaGAGGCCCTGGATTCATAGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATPLSH*RPWIHS
Trigger: GCTATGAATCCAGGGCCTGCAGTGACTCAGAGGAGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGTGCTGGCCTTATTCTaGAAGCTTGTGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAVLALF*KLVALG
Trigger: ACCCAGTGCCACAAGCTTGCAGAATAAGGCCAGCAC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTATTTAGTCCTGGGTTaGTGGCCAGGCAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYLVLG*WPGRLC
Trigger: ACAGAGCCTGCCTGGCCAGCAACCCAGGACTAAATA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTCACATGGTTAGGTaGCTCTGCCTTGATCCCCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACHMVR*LCLDPL
Trigger: GAGGGGATCAAGGCAGAGGCACCTAACCATGTGACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGGAGAACTGACAGCTaGACTGGTCCATCCCTATCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARRTDS*TGPSLS
Trigger: GGATAGGGATGGACCAGTGCAGCTGTCAGTTCTCCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTTCAGCTGTCTCAGTaGCCTGGAGCAGTACTCTGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFQLSQ*PGAVLW
Trigger: CCAGAGTACTGCTCCAGGGCACTGAGACAGCTGAAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCCATTCTGATCACATaGCGACAGCTCGACAGGAGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASILIT*RQLDRS
Trigger: GCTCCTGTCGAGCTGTCGGCATGTGATCAGAATGGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCAGGCACAGGAGTCCTaGAGATGGCATTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAQAQES*RWHSHP
Trigger: AGGATGAGAATGCCATCTGCAGGACTCCTGTGCCTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCGGATACTGGGCAGCTaGAGCTATGCCTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARILGS*SYACQH
Trigger: ATGTTGACAGGCATAGCTGCAGCTGCCCAGTATCCG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCAAGTAAAACCGACTaGCAGGCCATGTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPSKTD*QAMWAK
Trigger: CTTTGCCCACATGGCCTGGCAGTCGGTTTTACTTGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGTTGGTCTTCAGTCTaGCTCTCTTCTCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGWSSV*LSSPRS
Trigger: TGACCGAGGAGAAGAGAGCCAGACTGAAGACCAACC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGAAGGTGGACCTGCTaGAGGAGCAGGTGTCTAAGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARRWTC*RSRCLS
Trigger: ACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGAAAACTCTGTCTTCTaGCACTGGGGGTTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAENSVF*HWGLAL
Trigger: GAGAGCCAACCCCCAGTGCCAGAAGACAGAGTTTTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGACTGTGCTCAGTTCTaGTGCCCAGCCAAATGTCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADCAQF*CPAKCL
Trigger: GAGACATTTGGCTGGGCACCAGAACTGAGCACAGTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACATGGGGCTCCAACTaGAGCTCTAGTGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATWGSN*SSSVSP
Trigger: AGGAGACACACTAGAGCTCCAGTTGGAGCCCCATGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTTGCCCTGTCACATaGTTAGGTGCCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASCPVT*LGASAL
Trigger: CAAGGCAGAGGCACCTAACCATGTGACAGGGCAAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCAGAGACTTCAGGATaGCTTTCTGGGGCAAAGCAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAETSG*LSGAKH
Trigger: GTGCTTTGCCCCAGAAAGCCATCCTGAAGTCTCTGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGTCCATCCCTATCCTaGGAGCCACCATCTCATTCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGPSLS*EPPSHS
Trigger: TGAATGAGATGGTGGCTCCCAGGATAGGGATGGACC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTACTCTGGCCAGATGTaGCTTTTCCTCGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYSGQM*LFLDRG
Trigger: ACCCCTGTCGAGGAAAAGCCACATCTGGCCAGAGTA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTGGAGCAGTACTCTaGCCAGATGTGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPGAVL*PDVAFP
Trigger: AGGAAAAGCCACATCTGGCCAGAGTACTGCTCCAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAGCTCTCCATGAGTTaGATGAAGCCCTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKLSMS*MKPSGV
Trigger: CACCCCTGAGGGCTTCATCCAACTCATGGAGAGCTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGAACAAAACAGACCCTaGAGAGGCAGCGGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAEQNRP*RGSGSH
Trigger: ATGACTACCGCTGCCTCTTCAGGGTCTGTTTTGTTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTCCTCCTTTATGAGTaGTCTGCAGGGTGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALLLYE*SAGCQF
Trigger: AAACTGGCACCCTGCAGATCACTCATAAAGGAGGAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGTATCTGGGCCAGATaGACCTGGGTTAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASIWAR*TWVRTV
Trigger: CACTGTTCTAACCCAGGTTCATCTGGCCCAGATACT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGGCAACACAGAAGATaGCACCCAAGGTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGQHRR*HPRSHD
Trigger: ATCATGAGACCTTGGGTGTCATCTTCTGTGTTGCCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAACCCTAGAGGTCCTTaGTTGGCAAACTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGANPRGP*LANWLP
Trigger: AGGAAGCCAGTTTGCCAATCAAGGACCTCTAGGGTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAGACCTCAACCACTTaGGCCAGTCGAGAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKTSTT*ASRERK
Trigger: TTTCCTCTCTCGACTGGCTCAAGTGGTTGAGGTCTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTGAGAATATCGACTaGTCGTTCCCAGGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPENID*SFPGKV
Trigger: GACCTTTCCTGGGAACGAGCAGTCGATATTCTCAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACTTCTTCAGCAAAGTaGACCTTCACGGGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATSSAK*TFTGLV
Trigger: GACCAACCCCGTGAAGGTGCACTTTGCTGAAGAAGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTCTTCCAGGGCCAGTaGAAAGTACTCGATACTTCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALFQGQ*KVLDTS
Trigger: CGAAGTATCGAGTACTTTGCACTGGCCCTGGAAGAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCCCTTTCTACCACCTaGTGGATGAGTTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASLSTT*WMSSSS
Trigger: CGAAGAGGAACTCATCCAGCAGGTGGTAGAAAGGGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGCCGCGAGTCGGAGTaGAGAGCTACATTTCATTTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASRESE*RATFHF
Trigger: GAAATGAAATGTAGCTCTGCACTCCGACTCGCGGCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTCATAGCCTTCTTCTaGAGATACCCGGTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFIAFF*RYPVRL
Trigger: CAAGCGCACCGGGTATCTGCAGAAGAAGGCTATGAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTGTTCCCAGGAGGCTaGTCCTCCTTTATGAGTGAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALFPGG*SSFMSD
Trigger: ATCACTCATAAAGGAGGAGCAGCCTCCTGGGAACAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTGCTCAGTTCTGGTaGCCAGCCAAATGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACAQFW*PAKCLQ
Trigger: TTGGAGACATTTGGCTGGGCACCAGAACTGAGCACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTGGCACTGGGTTCTaGAGTAGAAACATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACGTGF*SRNISG
Trigger: CCCAGAGATGTTTCTACTGCAGAACCCAGTGCCACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAACTGGCTTCCTCTGTaGCAAGGGCAACACAGAAGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGANWLPL*QGQHRR
Trigger: TCTTCTGTGTTGCCCTTGGCACAGAGGAAGCCAGTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGCAGAGAATTACCCTaGCTGTGTCCACTGATGAGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASRELP*LCPLMS
Trigger: GCTCATCAGTGGACACAGCCAGGGTAATTCTCTGCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACTCGATACTTCGGATaGACAGCTTCTCCTTCACGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATRYFG*TASPSR
Trigger: CCGTGAAGGAGAAGCTGTCCATCCGAAGTATCGAGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTTTCTACCACCTGCTaGATGAGTTCCTCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALSTTC*MSSSSC
Trigger: GCACGAAGAGGAACTCATCCAGCAGGTGGTAGAAAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGTCACTGCAGGCCCTaGATTCATAGCCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASHCRP*IHSLLL
Trigger: CAGAAGAAGGCTATGAATCCAGGGCCTGCAGTGACT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGACAGAGGAAGCCACTaGTTTCAATCCCGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADRGSH*FQSRFS
Trigger: AGAGAAGCGGGATTGAAACCAGTGGCTTCCTCTGTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCCATGCTCTATGGTTaGTTCTTTGGGGGCAATCCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASMLYG*FFGGNP
Trigger: GGGATTGCCCCCAAAGAACCAACCATAGAGCATGGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATTTCCAACTGGACATaGGGCTCCAACTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAISNWT*GSNWSS
Trigger: AGAGCTCCAGTTGGAGCCCCATGTCCAGTTGGAAAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAATCCCATTTCCAACTaGACATGGGGCTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGANPISN*TWGSNW
Trigger: CCAGTTGGAGCCCCATGTCCAGTTGGAAATGGGATT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCAGGTGCACTTCTCTaGGGGATGTTTGTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPGALL*GMFVSN
Trigger: GTTGGAAACAAACATCCCCCAGAGAAGTGCACCTGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATCTCTTCGGGGGACTaGTCCATTCTGATCACATGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAISSGD*SILITC
Trigger: GCATGTGATCAGAATGGACCAGTCCCCCGAAGAGAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCCTGTCAACATGTCTaGCTTCTCTCCTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAACQHV*LLSFQH
Trigger: GTGCTGAAAGGAGAGAAGCCAGACATGTTGACAGGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTCCAAGTATAGCTTaGGCACGTTGGGCATACACA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASPSIA*ARWAYT
Trigger: TGTGTATGCCCAACGTGCTCAAGCTATACTTGGAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTAGCTCTACACGGCTaGTGTTTGCAAACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALALHG*CLQTLP
Trigger: TGGCAGAGTTTGCAAACATCAGCCGTGTAGAGCTAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTGAAGATACACTTTaGCGACGCTCACTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPEDTL*RRSLSQ
Trigger: CTGAGAAAGTGAGCGTCGTCAAAGTGTATCTTCAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGAACCTTGACGTCCTaGAGATACACTTTGACGACG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARTLTS*RYTLTT
Trigger: CGTCGTCAAAGTGTATCTTCAGGACGTCAAGGTTCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATAGTATTCCTCATCTaGGCTGCCATCCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAIVFLI*AAILKG
Trigger: GCCTTTGAGGATGGCAGCTCAGATGAGGAATACTAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCGAGAGTCGATGACTaGTTTGGTTTCCATGGTCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASRVDD*FGFHGL
Trigger: GAGACCATGGAAACCAAATCAGTCATCGACTCTCGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACACTCGAGAGTCGATaGCTGATTTGGTTTCCATGG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATLESR*LIWFPW
Trigger: CCATGGAAACCAAATCAGTCATCGACTCTCGAGTGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCGCCGAAGCCATCTTaGCACCATTTGTTCTATTCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAPKPS*HHLFYS
Trigger: AGAATAGAACAAATGGTGGCAAGATGGCTTCGGCGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTGCAGATACCCGGTaGGCTTGTTGTTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASADTR*ACCLFP
Trigger: TGGAAACAAACAACAAGCGCACCGGGTATCTGCAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTAGGGGCTATATCTTaGCCTGTCACATGGTTAGGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALGAIS*PVTWLG
Trigger: ACCTAACCATGTGACAGGGCAAGATATAGCCCCTAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTGCTTTCCGTGTCTaGAATAAACTGGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACAFRV*NKLVSS
Trigger: GCTGGAGACCAGTTTATTCCAGACACGGAAAGCACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGTCTCCATGCTCTATaGTTGGTTCTTTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGACLHAL*LVLWGQ
Trigger: TTGCCCCCAAAGAACCAACCATAGAGCATGGAGACA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGTGCCACATAATACTTaGTCTCCTGCTAGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAVPHNT*SPASSA
Trigger: GGCAGAACTAGCAGGAGACCAAGTATTATGTGGCAC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTAGAGGTCCTTGATTaGCAAACTGGCTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALEVLD*QTGFLC
Trigger: ACAGAGGAAGCCAGTTTGCCAATCAAGGACCTCTAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTTCCATTTACCAGTaGCACAGAGCTGAAGGGACT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASSIYQ*HRAEGT
Trigger: AGTCCCTTCAGCTCTGTGCCACTGGTAAATGGAAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTCATTTGGAGGATCTaGTCACCAGGGAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFIWRI*SPGKSL
Trigger: CAAGCTTTTCCCTGGTGATCAGATCCTCCAAATGAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTCCACCATATGTCTTaGGTTCTCCGAGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFHHMS*VLRGSV
Trigger: TACAGATCCTCGGAGAACTCAAGACATATGGTGGAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCAAAGTCAGAACCTTaGCGTCCTGAAGATACACTT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAKSEP*RPEDTL
Trigger: AAGTGTATCTTCAGGACGTCAAGGTTCTGACTTTGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTCCTAGACTCCTCCTaGAATACGTTGGTGCCATTT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFLDSS*NTLVPF
Trigger: AAATGGCACCAACGTATTTCAGGAGGAGTCTAGGAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTACACGGCTGATGTTTaGAAACTCTGCCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYTADV*KLCQCG
Trigger: TCCACATTGGCAGAGTTTGCAAACATCAGCCGTGTA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAGGAGCTGTCTCCATaGTCTATGGTTGGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKELSP*SMVGSL
Trigger: CAAAGAACCAACCATAGAGCATGGAGACAGCTCCTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCATCTCATTCATGCCTaGAAAACCCAAAGATGTGGC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAHLIHA*KTQRCG
Trigger: GCCACATCTTTGGGTTTTGCAGGCATGAATGAGATG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCACCATCTCATTCATaGCTGCAAAACCCAAAGATG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPPSHS*LQNPKM
Trigger: CATCTTTGGGTTTTGCAGGCATGAATGAGATGGTGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCACATTCCCAACATTaGGGCCACAAGAATGTGAAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPHSQH*GHKNVN
Trigger: ATTCACATTCTTGTGGCCGCAATGTTGGGAATGTGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGTTCCAGCAAATTCTaGTTCCTCTTCATGTGGAAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGSSKF*FLFMWK
Trigger: CTTCCACATGAAGAGGAACCAGAATTTGCTGGAACC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGTCTTTTGCACTGTTaGATTCCAGCAGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGLLHC*IPAAKS
Trigger: TGACTTTGCTGCTGGAATCCAACAGTGCAAAAGACC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGAAAATGGAGGTAACTaGGTCAACCAACAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAENGGN*VNQQPV
Trigger: TACAGGCTGTTGGTTGACCCAGTTACCTCCATTTTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCGAACAACTGTGATTaGAAGAGAATCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAANNCD*KRIFCF
Trigger: GAAGCAGAAGATTCTCTTTCAATCACAGTTGTTCGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTATATAGTAAACATTTaGAGAGGGTGGGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYIVNI*RGWVGE
Trigger: CTCTCCCACCCACCCTCTTCAAATGTTTACTATATA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGTTCCTCTTCATGTaGAAGCTAATGGCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWFLFM*KLMAFL
Trigger: CAAGAAAGCCATTAGCTTCCACATGAAGAGGAACCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTTGAAGTTTCTAAGTaGGGATCCTCTTGTGGACAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFEVSK*GSSCGH
Trigger: ATGTCCACAAGAGGATCCTCACTTAGAAACTTCAAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACACCCAAGGTCTCATaGTGCATCCATTTTATAGTT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATPKVS*CIHFIV
Trigger: AACTATAAAATGGATGCATCATGAGACCTTGGGTGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR TCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAATGTGAATATCAAATaGCCTTCCCATAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGANVNIK*PSHSSS
Trigger: CGATGAGCTATGGGAAGGTCATTTGATATTCACATT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGATGTTTGCAAACTCTaGCAATGTGGACATGATGTT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADVCKL*QCGHDV
Trigger: AACATCATGTCCACATTGGCAGAGTTTGCAAACATC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTGCTATTGATAACCTaGCTAATCCCATACTTGGCT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALLLIT*LIPYLA
Trigger: AGCCAAGTATGGGATTAGCCAGGTTATCAATAGCAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAATTCTCTTTATTGTTaGGGTCAATCCGGAAGCGAA +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGANSLYC*GQSGSE
Trigger: TTCGCTTCCGGATTGACCCCAACAATAAAGAGAATT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAGGCTCTGTGTATTTaGGGGCAGTTTCTTGTATAT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKALCI*GQFLVY
Trigger: ATATACAAGAAACTGCCCCCAAATACACAGAGCCTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR GCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGTAGAGTTTATTCTGTaGCACATAATACTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAVEFIL*HIILGL
Trigger: GAGACCAAGTATTATGTGGCACAGAATAAACTCTAC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CCA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTACTATTTTACCAGCTaGAGAGCTAATATCAAGAGT +
Preference number: 4 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYYFTS*RANIKS
Trigger: ACTCTTGATATTAGCTCTCCAGCTGGTAAAATAGTA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp ACCTGCAGAGGAGGTGCCGCCCGCGCGGACAAGGACCTAGCGGGCTaGCGCTCTCGGAGAAGGGCGGCCCCGCCCAGCGGCGGGCACGGT +
Preference number: 5 (lower is better)
Translates to: TCRGGAARADKDLAG*RSRRRAAPPSGGHG
Trigger: ACCGTGCCCGCCGCTGGGCGGGGCCGCCCTTCTCCGAGAGCGTCAGCCCGCTAGGTCCTTGTCCGCGCGGGCGGCACCTCCTCTGCAGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377765.8
CDS CCA 90 bp CATCCTCAAAGGCCAGTGGTGGGTGCAGGGCCAGGGGTTCCAGCATaGAACTGGGCTGGGCCTCAGTCCAGCCCTGCTGACCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HPQRPVVGAGPGVPA*NWAGPQSSPADPRL
Trigger: CAGCCTGGGGTCAGCAGGGCTGGACTGAGGCCCAGCCCAGTTCCATGCTGGAACCCCTGGCCCTGCACCCACCACTGGCCTTTGAGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp CTCACTCGAGCCACTGGTCCTGTAGCCGCGGCTCTCAGTGTTGGCTaGGTCGGACGCCTCGGACTCGGCACTGTCTGTCGTGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: LTRATGPVAAALSVG*VGRLGLGTVCRAAG
Trigger: GCCAGCAGCACGACAGACAGTGCCGAGTCCGAGGCGTCCGACTCAGCCAACACTGAGAGCCGCGGCTACAGGACCAGTGGCTCGAGTGAG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp GGGCAGGAGGCCCTTGGGCCGTTGACCTGTTTACAGGGCCGTGGATaGCCGGAACTTCTGGGTCAAACAGAACACGGCGGCCGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GQEALGPLTCLQGRG*PELLGQTEHGGREG
Trigger: GCCCTCACGGCCGCCGTGTTCTGTTTGACCCAGAAGTTCCGGGCATCCACGGCCCTGTAAACAGGTCAACGGCCCAAGGGCCTCCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp TGGACTCACTCGAGCCACTGGTCCTGTAGCCGCGGCTCTCAGTGTTaGCTGAGTCGGACGCCTCGGACTCGGCACTGTCTGTCGTGCTGC +
Preference number: 5 (lower is better)
Translates to: WTHSSHWSCSRGSQC*LSRTPRTRHCLSCC
Trigger: GCAGCACGACAGACAGTGCCGAGTCCGAGGCGTCCGACTCAGCCAACACTGAGAGCCGCGGCTACAGGACCAGTGGCTCGAGTGAGTCCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp CCGTGGATGCCCGGAACTTCTGGGTCAAACAGAACACGGCGGCCGTaGGGGCCGTGCACTGACGGGCCAGGAGTTTCACACTCAGGTCGT +
Preference number: 5 (lower is better)
Translates to: PWMPGTSGSNRTRRP*GPCTDGPGVSHSGR
Trigger: ACGACCTGAGTGTGAAACTCCTGGCCCGTCAGTGCACGGCCCTCACGGCCGCCGTGTTCTGTTTGACCCAGAAGTTCCGGGCATCCACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp ACGGCCCCCTGCATCTCTTCGGGGGACTGGTCCATTCTGATCACATaGCGACAGCTCGACAGGAGCTTCTGGGAGCCCATGCAGAGGCGG +
Preference number: 5 (lower is better)
Translates to: TAPCISSGDWSILIT*RQLDRSFWEPMQRR
Trigger: CCGCCTCTGCATGGGCTCCCAGAAGCTCCTGTCGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCCCCGAAGAGATGCAGGGGGCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp TGTCACGCACGGCCCCCTGCATCTCTTCGGGGGACTGGTCCATTCTaGTCACATGCCGACAGCTCGACAGGAGCTTCTGGGAGCCCATGC +
Preference number: 5 (lower is better)
Translates to: CHARPPASLRGTGPF*SHADSSTGASGSPC
Trigger: GCATGGGCTCCCAGAAGCTCCTGTCGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCCCCGAAGAGATGCAGGGGGCCGTGCGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp CTGTGGCACGGGCCCCCTCCTCACAGGAGCATGACCCTCCTCATCTaGGGATACTGGGCAGCTGCAGCTATGCCTGTCAACATGTCTGGC +
Preference number: 5 (lower is better)
Translates to: LWHGPPPHRSMTLLI*GYWAAAAMPVNMSG
Trigger: GCCAGACATGTTGACAGGCATAGCTGCAGCTGCCCAGTATCCGCAGATGAGGAGGGTCATGCTCCTGTGAGGAGGGGGCCCGTGCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS CCA 90 bp GCTTTCAGCTGTCTCAGTGCCCTGGAGCAGTACTCTGGCCAGATGTaGCTTTTCCTCGACAGGGGTGCGGTGGTGCAGCTGTGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: AFSCLSALEQYSGQM*LFLDRGAVVQLWAR
Trigger: CCGAGCCCACAGCTGCACCACCGCACCCCTGTCGAGGAAAAGCCACATCTGGCCAGAGTACTGCTCCAGGGCACTGAGACAGCTGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp CAGAAGGCCAGGCTCACCCTGCATGTCCTGCAGAGAGGACACAGTTaGGGAGGGTGCACCAAGGGCCAGGTAGGGCTCCCTGTCATAGTA +
Preference number: 5 (lower is better)
Translates to: QKARLTLHVLQRGHS*GGCTKGQVGLPVIV
Trigger: TACTATGACAGGGAGCCCTACCTGGCCCTTGGTGCACCCTCCCCAACTGTGTCCTCTCTGCAGGACATGCAGGGTGAGCCTGGCCTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp TGCTGGAAGGTGTCACGCACGGCCCCCTGCATCTCTTCGGGGGACTaGTCCATTCTGATCACATGCCGACAGCTCGACAGGAGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CWKVSRTAPCISSGD*SILITCRQLDRSFW
Trigger: CCAGAAGCTCCTGTCGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCCCCGAAGAGATGCAGGGGGCCGTGCGTGACACCTTCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp AAACCGACTGCCAGGCCATGTGGGCAAAGTTGGGTGGTATCTCTGTaGCACGGGCCCCCTCCTCACAGGAGCATGACCCTCCTCATCTGC +
Preference number: 5 (lower is better)
Translates to: KPTARPCGQSWVVSL*HGPPPHRSMTLLIC
Trigger: GCAGATGAGGAGGGTCATGCTCCTGTGAGGAGGGGGCCCGTGCCACAGAGATACCACCCAACTTTGCCCACATGGCCTGGCAGTCGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS CCA 90 bp CTAAGTCATCCTCTTCCAGAGCGTCCATGGACTCACTCGAGCCACTaGTCCTGTAGCCGCGGCTCTCAGTGTTGGCTGAGTCGGACGCCT +
Preference number: 5 (lower is better)
Translates to: LSHPLPERPWTHSSH*SCSRGSQCWLSRTP
Trigger: AGGCGTCCGACTCAGCCAACACTGAGAGCCGCGGCTACAGGACCAGTGGCTCGAGTGAGTCCATGGACGCTCTGGAAGAGGATGACTTAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp GCTTCTCTCCTCCTGGCTGTCAGAGTCAATGCTCTCTGCGAGGCCTaGCGAGCCAAAGTGGAAGAAGGTGGACCTGCTGGAGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: ASLLLAVRVNALCEA*RAKVEEGGPAGGAG
Trigger: ACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGAGCATTGACTCTGACAGCCAGGAGGAGAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp GGGGGTTGGCTCTCTGGGCCAGGTCCAGGAGACAGAGGAAGCCACTaGTTTCAATCCCGCTTCTCTCCTCCTGGCTGTCAGAGTCAATGC +
Preference number: 5 (lower is better)
Translates to: GGWLSGPGPGDRGSH*FQSRFSPPGCQSQC
Trigger: GCATTGACTCTGACAGCCAGGAGGAGAGAAGCGGGATTGAAACCAGTGGCTTCCTCTGTCTCCTGGACCTGGCCCAGAGAGCCAACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp ACCCACTCAGGGCTGTCCCTAGGGGCTATATCTTGCCCTGTCACATaGTTAGGTGCCTCTGCCTTGATCCCCTCTGGAGGGACGGCTGGT +
Preference number: 5 (lower is better)
Translates to: THSGLSLGAISCPVT*LGASALIPSGGTAG
Trigger: ACCAGCCGTCCCTCCAGAGGGGATCAAGGCAGAGGCACCTAACCATGTGACAGGGCAAGATATAGCCCCTAGGGACAGCCCTGAGTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp GACTGGTCCATTCTGATCACATGCCGACAGCTCGACAGGAGCTTCTaGGAGCCCATGCAGAGGCGGCTCCGGCTTTCGGTAAAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: DWSILITCRQLDRSF*EPMQRRLRLSVKCQ
Trigger: CTGGCACTTTACCGAAAGCCGGAGCCGCCTCTGCATGGGCTCCCAGAAGCTCCTGTCGAGCTGTCGGCATGTGATCAGAATGGACCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp TGCTCTCTGCGAGGCCTGGCGAGCCAAAGTGGAAGAAGGTGGACCTaGTGGAGGAGCAGGTGTCTAAGTCATCCTCTTCCAGAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: CSLRGLASQSGRRWT*WRSRCLSHPLPERP
Trigger: TGGACGCTCTGGAAGAGGATGACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp CAGGCTGCGGGCCACGGAAGCATGTGGCATAGGAGAACTGACAGCTaGACTGGTCCATCCCTATCCTGGGAGCCACCATCTCATTCATGC +
Preference number: 5 (lower is better)
Translates to: QAAGHGSMWHRRTDS*TGPSLSWEPPSHSC
Trigger: GCATGAATGAGATGGTGGCTCCCAGGATAGGGATGGACCAGTGCAGCTGTCAGTTCTCCTATGCCACATGCTTCCGTGGCCCGCAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp TGCTGGAGGAGCAGGTGTCTAAGTCATCCTCTTCCAGAGCGTCCATaGACTCACTCGAGCCACTGGTCCTGTAGCCGCGGCTCTCAGTGT +
Preference number: 5 (lower is better)
Translates to: CWRSRCLSHPLPERP*THSSHWSCSRGSQC
Trigger: ACACTGAGAGCCGCGGCTACAGGACCAGTGGCTCGAGTGAGTCCATGGACGCTCTGGAAGAGGATGACTTAGACACCTGCTCCTCCAGCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp TCTCTGCGAGGCCTGGCGAGCCAAAGTGGAAGAAGGTGGACCTGCTaGAGGAGCAGGTGTCTAAGTCATCCTCTTCCAGAGCGTCCATGG +
Preference number: 5 (lower is better)
Translates to: SLRGLASQSGRRWTC*RSRCLSHPLPERPW
Trigger: CCATGGACGCTCTGGAAGAGGATGACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp CCCTGTCTTCTTCCTCTGTCTCAGGCTGCGGGCCACGGAAGCATGTaGCATAGGAGAACTGACAGCTGCACTGGTCCATCCCTATCCTGG +
Preference number: 5 (lower is better)
Translates to: PCLLPLSQAAGHGSM*HRRTDSCTGPSLSW
Trigger: CCAGGATAGGGATGGACCAGTGCAGCTGTCAGTTCTCCTATGCCACATGCTTCCGTGGCCCGCAGCCTGAGACAGAGGAAGAAGACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp CACTGGTTTCAATCCCGCTTCTCTCCTCCTGGCTGTCAGAGTCAATaGTCTCTGCGAGGCCTGGCGAGCCAAAGTGGAAGAAGGTGGACC +
Preference number: 5 (lower is better)
Translates to: HWFQSRFSPPGCQSQ*SLRGLASQSGRRWT
Trigger: GGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGAGCATTGACTCTGACAGCCAGGAGGAGAGAAGCGGGATTGAAACCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp CCAAAGCAGCACTCTCGGAAAACTCTGTCTTCTGGCACTGGGGGTTaGCTCTCTGGGCCAGGTCCAGGAGACAGAGGAAGCCACTGGTTT +
Preference number: 5 (lower is better)
Translates to: PKQHSRKTLSSGTGG*LSGPGPGDRGSHWF
Trigger: AAACCAGTGGCTTCCTCTGTCTCCTGGACCTGGCCCAGAGAGCCAACCCCCAGTGCCAGAAGACAGAGTTTTCCGAGAGTGCTGCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp CAGCCAAATGTCTCCAAAGCAGCACTCTCGGAAAACTCTGTCTTCTaGCACTGGGGGTTGGCTCTCTGGGCCAGGTCCAGGAGACAGAGG +
Preference number: 5 (lower is better)
Translates to: QPNVSKAALSENSVF*HWGLALWARSRRQR
Trigger: CCTCTGTCTCCTGGACCTGGCCCAGAGAGCCAACCCCCAGTGCCAGAAGACAGAGTTTTCCGAGAGTGCTGCTTTGGAGACATTTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp GGAGGAGGGTGTCTTTGTCTATCTTTACTGTGTGTCGCACAGGGATaGGGGTCTGAGTTGGGTTCCTGGCGGGCCCATCAGCTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GGGCLCLSLLCVAQG*GSELGSWRAHQLQQ
Trigger: TTGCTGCAGCTGATGGGCCCGCCAGGAACCCAACTCAGACCCTCATCCCTGTGCGACACACAGTAAAGATAGACAAAGACACCCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp TTTGTCTATCTTTACTGTGTGTCGCACAGGGATGAGGGTCTGAGTTaGGTTCCTGGCGGGCCCATCAGCTGCAGCAACTTTAGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: FVYLYCVSHRDEGLS*VPGGPISCSNFSPG
Trigger: GCCCGGGCTAAAGTTGCTGCAGCTGATGGGCCCGCCAGGAACCCAACTCAGACCCTCATCCCTGTGCGACACACAGTAAAGATAGACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359927.3
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp AGTCAATGCTCTCTGCGAGGCCTGGCGAGCCAAAGTGGAAGAAGGTaGACCTGCTGGAGGAGCAGGTGTCTAAGTCATCCTCTTCCAGAG +
Preference number: 5 (lower is better)
Translates to: SQCSLRGLASQSGRR*TCWRSRCLSHPLPE
Trigger: CTCTGGAAGAGGATGACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGAGCATTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp AATGTCTCCAAAGCAGCACTCTCGGAAAACTCTGTCTTCTGGCACTaGGGGTTGGCTCTCTGGGCCAGGTCCAGGAGACAGAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: NVSKAALSENSVFWH*GLALWARSRRQRKP
Trigger: TGGCTTCCTCTGTCTCCTGGACCTGGCCCAGAGAGCCAACCCCCAGTGCCAGAAGACAGAGTTTTCCGAGAGTGCTGCTTTGGAGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp GCTGCCTTCATACAGCCTGGGGTCCAGCCTGACTGTGCTCAGTTCTaGTGCCCAGCCAAATGTCTCCAAAGCAGCACTCTCGGAAAACTC +
Preference number: 5 (lower is better)
Translates to: AAFIQPGVQPDCAQF*CPAKCLQSSTLGKL
Trigger: GAGTTTTCCGAGAGTGCTGCTTTGGAGACATTTGGCTGGGCACCAGAACTGAGCACAGTCAGGCTGGACCCCAGGCTGTATGAAGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp CATAGCTCATCGATAAGCCCAAGTAAAACCGACTGCCAGGCCATGTaGGCAAAGTTGGGTGGTATCTCTGTGGCACGGGCCCCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HSSSISPSKTDCQAM*AKLGGISVARAPSS
Trigger: TGAGGAGGGGGCCCGTGCCACAGAGATACCACCCAACTTTGCCCACATGGCCTGGCAGTCGGTTTTACTTGGGCTTATCGATGAGCTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS GCA 90 bp ATGAGTTCCTCTTCGTGCAGCAGGTGCAGCCGGGAGATGCTGTACTaGTCTTCCAGGGCCAGTGCAAAGTACTCGATACTTCGGATGGAC +
Preference number: 5 (lower is better)
Translates to: MSSSSCSRCSREMLY*SSRASAKYSILRMD
Trigger: GTCCATCCGAAGTATCGAGTACTTTGCACTGGCCCTGGAAGAGCAGTACAGCATCTCCCGGCTGCACCTGCTGCACGAAGAGGAACTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp ACAGGCGTAGATCCGTTCCTGGATGTGCAGAGCCGCGAGTCGGAGTaGAGAGCTACATTTCATTTCTACAGCAAAGCGCTCCTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: TGVDPFLDVQSRESE*RATFHFYSKALLEH
Trigger: GTGCTCCAGGAGCGCTTTGCTGTAGAAATGAAATGTAGCTCTGCACTCCGACTCGCGGCTCTGCACATCCAGGAACGGATCTACGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp GCCTTCATACAGCCTGGGGTCCAGCCTGACTGTGCTCAGTTCTGGTaGCCAGCCAAATGTCTCCAAAGCAGCACTCTCGGAAAACTCTGT +
Preference number: 5 (lower is better)
Translates to: AFIQPGVQPDCAQFW*PAKCLQSSTLGKLC
Trigger: ACAGAGTTTTCCGAGAGTGCTGCTTTGGAGACATTTGGCTGGGCACCAGAACTGAGCACAGTCAGGCTGGACCCCAGGCTGTATGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp CATCTGCGGATACTGGGCAGCTGCAGCTATGCCTGTCAACATGTCTaGCTTCTCTCCTTTCAGCACGACAGGCACAGGAGTCCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: HLRILGSCSYACQHV*LLSFQHDRHRSPAD
Trigger: ATCTGCAGGACTCCTGTGCCTGTCGTGCTGAAAGGAGAGAAGCCAGACATGTTGACAGGCATAGCTGCAGCTGCCCAGTATCCGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS TCA 90 bp GTGTCTTTGTCTATCTTTACTGTGTGTCGCACAGGGATGAGGGTCTaGGTTGGGTTCCTGGCGGGCCCATCAGCTGCAGCAACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: VSLSIFTVCRTGMRV*VGFLAGPSAAATLA
Trigger: GGCTAAAGTTGCTGCAGCTGATGGGCCCGCCAGGAACCCAACTCAGACCCTCATCCCTGTGCGACACACAGTAAAGATAGACAAAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp CTTCTTTCAGGAGGTCCAGGGGGTCCTTGGGAACAAAACAGACCCTaGAGAGGCAGCGGTAGTCATGTGACTCCTCCCTTTCTACCACCT +
Preference number: 5 (lower is better)
Translates to: LLSGGPGGPWEQNRP*RGSGSHVTPPFLPP
Trigger: AGGTGGTAGAAAGGGAGGAGTCACATGACTACCGCTGCCTCTTCAGGGTCTGTTTTGTTCCCAAGGACCCCCTGGACCTCCTGAAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp GTCAGAGAGAGGTTCGAGTACGCAGTCCACCTCAGAGGACTCCTCTaGGTCACTGCAGGCCCTGGATTCATAGCCTTCTTCTGCAGATAC +
Preference number: 5 (lower is better)
Translates to: VRERFEYAVHLRGLL*VTAGPGFIAFFCRY
Trigger: GTATCTGCAGAAGAAGGCTATGAATCCAGGGCCTGCAGTGACTCAGAGGAGTCCTCTGAGGTGGACTGCGTACTCGAACCTCTCTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCGCGGCTCTCAGTGTaGGCTGAGTCGGACGCCTCG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPRLSV*AESDAS
Trigger: CGAGGCGTCCGACTCAGCCAACACTGAGAGCCGCGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGCGGGGCTCCCCCTaGCCGGGAAGCTGTACTCTC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWRGSP*PGSCTL
Trigger: GAGAGTACAGCTTCCCGGCAAGGGGGAGCCCCGCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp CCACCATCTCATTCATGCCTGCAAAACCCAAAGATGTGGCCACCCTaGGACTGGCAGAGACTTCAGGATGGCTTTCTGGGGCAAAGCACA +
Preference number: 5 (lower is better)
Translates to: PPSHSCLQNPKMWPP*DWQRLQDGFLGQST
Trigger: TGTGCTTTGCCCCAGAAAGCCATCCTGAAGTCTCTGCCAGTCTCAGGGTGGCCACATCTTTGGGTTTTGCAGGCATGAATGAGATGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp GAATTACCCTGGCTGTGTCCACTGATGAGCACTTCTTCAGCAAAGTaGACCTTCACGGGGTTGGTCTTCAGTCTGGCTCTCTTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: ELPWLCPLMSTSSAK*TFTGLVFSLALFSS
Trigger: CGAGGAGAAGAGAGCCAGACTGAAGACCAACCCCGTGAAGGTGCACTTTGCTGAAGAAGTGCTCATCAGTGGACACAGCCAGGGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTCTGGCACTGGGGGTaGGCTCTCTGGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFWHWG*ALWARS
Trigger: GGACCTGGCCCAGAGAGCCAACCCCCAGTGCCAGAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCCCTCCCCTCCTGCTaGGCTGTCTTCCATCTGGCC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPLPSC*AVFHLA
Trigger: GGCCAGATGGAAGACAGCCAAGCAGGAGGGGAGGGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp CCGGAAGCGAATGGCAGAAATAGAAGACACTCGAGAGTCGATGACTaGTTTGGTTTCCATGGTCTCGGGCTCCATCTCCATGACCCTGGA +
Preference number: 5 (lower is better)
Translates to: PEANGRNRRHSRVDD*FGFHGLGLHLHDPG
Trigger: TCCAGGGTCATGGAGATGGAGCCCGAGACCATGGAAACCAAATCAGTCATCGACTCTCGAGTGTCTTCTATTTCTGCCATTCGCTTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp ATGTGGCATAGGAGAACTGACAGCTGCACTGGTCCATCCCTATCCTaGGAGCCACCATCTCATTCATGCCTGCAAAACCCAAAGATGTGG +
Preference number: 5 (lower is better)
Translates to: MWHRRTDSCTGPSLS*EPPSHSCLQNPKMW
Trigger: CCACATCTTTGGGTTTTGCAGGCATGAATGAGATGGTGGCTCCCAGGATAGGGATGGACCAGTGCAGCTGTCAGTTCTCCTATGCCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCAGAGAGGACACAGTaGGGGAGGGTGCACCAAGGG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAERTQ*GRVHQG
Trigger: CCCTTGGTGCACCCTCCCCAACTGTGTCCTCTCTGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTGAGCCTGGCAGCCTaGCCCTGGGGGTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALSLAA*PWGFSA
Trigger: AGCAGAGAACCCCCAGGGCAAGGCTGCCAGGCTCAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGAGGCCCTTGGGCCGTaGACCTGTTTACAGGGCCGT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAEALGP*TCLQGR
Trigger: ACGGCCCTGTAAACAGGTCAACGGCCCAAGGGCCTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 90 bp GCCTCTGCCTTGATCCCCTCTGGAGGGACGGCTGGTGAAACTGTCTaGTTCCCAAGAAAGAAATCAGGGTCTAAATCCAACTCTACGAAT +
Preference number: 5 (lower is better)
Translates to: ASALIPSGGTAGETV*FPRKKSGSKSNSTN
Trigger: ATTCGTAGAGTTGGATTTAGACCCTGATTTCTTTCTTGGGAAGCAGACAGTTTCACCAGCCGTCCCTCCAGAGGGGATCAAGGCAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp TGGAGAGGGAGAAGGAGCTGTCTCCATGCTCTATGGTTGGTTCTTTaGGGGCAATCCCATCCAGGTCTTGAGATAGAGGTAAGATTTGGG +
Preference number: 5 (lower is better)
Translates to: WRGRRSCLHALWLVL*GQSHPGLEIEVRFG
Trigger: CCCAAATCTTACCTCTATCTCAAGACCTGGATGGGATTGCCCCCAAAGAACCAACCATAGAGCATGGAGACAGCTCCTTCTCCCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCCTGGAGGCTGGGTTaGTGCTCTTGGTCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPWRLG*CSWSPS
Trigger: TGAGGGAGACCAAGAGCACAAACCCAGCCTCCAGGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGGTCCAGGGGGTCCTaGGGAACAAAACAGACCCTG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARSRGS*GTKQTL
Trigger: CAGGGTCTGTTTTGTTCCCAAGGACCCCCTGGACCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp GAAGGACGATTTAGGGACTCCCGACGTGCAGCGAACAACTGTGATTaGAAGAGAATCTTCTGCTTCCCTGAGAATATCGACTGCTCGTTC +
Preference number: 5 (lower is better)
Translates to: EGRFRDSRRAANNCD*KRIFCFPENIDCSF
Trigger: GAACGAGCAGTCGATATTCTCAGGGAAGCAGAAGATTCTCTTTCAATCACAGTTGTTCGCTGCACGTCGGGAGTCCCTAAATCGTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTACCCGGTGCGCTTGTaGTTTGTTTCCAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYPVRL*FVSRPE
Trigger: CTCTGGCCTGGAAACAAACAACAAGCGCACCGGGTA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGATTTGGGAAGGCCTaGCCTGAGCAGTATCTGGGC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARFGKA*PEQYLG
Trigger: GCCCAGATACTGCTCAGGCAAGGCCTTCCCAAATCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTATTTAGTCCTGGGTaGCTGGCCAGGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALFSPG*LARQAL
Trigger: CAGAGCCTGCCTGGCCAGCAACCCAGGACTAAATAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTCTCTGCTCTGTCCTaGAGGGTCTCTAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFSALS*RVSRGM
Trigger: CATCCCCCTAGAGACCCTCAAGGACAGAGCAGAGAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCAAGCTCTCCATGAGTaGGATGAAGCCCTCAGGGGT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAQALHE*DEALRG
Trigger: ACCCCTGAGGGCTTCATCCAACTCATGGAGAGCTTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCCATGTGGGCAAAGTaGGGTGGTATCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAAMWAK*GGISVA
Trigger: TGCCACAGAGATACCACCCAACTTTGCCCACATGGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGGCAGGCTAGGTCTTTaGCACTGTTGGATTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAGRLGL*HCWIPA
Trigger: TGCTGGAATCCAACAGTGCAAAAGACCTAGCCTGCC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGATACCCGGTGCGCTaGTTGTTTGTTTCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARYPVR*LFVSRP
Trigger: TGGCCTGGAAACAAACAACAAGCGCACCGGGTATCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGAGTCGATGACTGATTaGGTTTCCATGGTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAESMTD*VSMVSG
Trigger: GCCCGAGACCATGGAAACCAAATCAGTCATCGACTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTCCATGCTCTATGGTaGGTTCTTTGGGGGCAATCC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALHALW*VLWGQS
Trigger: GGATTGCCCCCAAAGAACCAACCATAGAGCATGGAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCTAGGGGCTATATCTaGCCCTGTCACATGGTTAGG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPRGYI*PCHMVR
Trigger: CCTAACCATGTGACAGGGCAAGATATAGCCCCTAGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCAAGACCTCAACCACTaGAGCCAGTCGAGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAQDLNH*SQSREE
Trigger: TTCCTCTCTCGACTGGCTCAAGTGGTTGAGGTCTTG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS TCA 90 bp GACACATCACCCGGGGAGTCACCTGAATCCTTCCTAGACTCCTCCTaGAATACGTTGGTGCCATTTTTGTTTGTAACTTCTCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: DTSPGESPESFLDSS*NTLVPFLFVTSLSL
Trigger: AAGAGACAGAGAAGTTACAAACAAAAATGGCACCAACGTATTTCAGGAGGAGTCTAGGAAGGATTCAGGTGACTCCCCGGGTGATGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp TCACTTTTGCCTTCTGAGAGTAAGCAATGGTTTGAAGTTTCTAAGTaGGGATCCTCTTGTGGACATGGTAGTGGTTCTGGCAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: SLLPSESKQWFEVSK*GSSCGHGSGSGREG
Trigger: GCCTTCCCTGCCAGAACCACTACCATGTCCACAAGAGGATCCTCACTTAGAAACTTCAAACCATTGCTTACTCTCAGAAGGCAAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp AGGCCACATTCCCAACATTGCGGCCACAAGAATGTGAATATCAAATaGCCTTCCCATAGCTCATCGATAAGCCCAAGTAAAACCGACTGC +
Preference number: 5 (lower is better)
Translates to: RPHSQHCGHKNVNIK*PSHSSSISPSKTDC
Trigger: GCAGTCGGTTTTACTTGGGCTTATCGATGAGCTATGGGAAGGTCATTTGATATTCACATTCTTGTGGCCGCAATGTTGGGAATGTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS CCA 90 bp AGCCATCTTGCCACCATTTGTTCTATTCTATGTGCTTTCCGTGTCTaGAATAAACTGGTCTCCAGCTCTTCCATTTACCTGCAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: SHLATICSILCAFRV*NKLVSSSSIYLQRR
Trigger: CCTCCTCTGCAGGTAAATGGAAGAGCTGGAGACCAGTTTATTCCAGACACGGAAAGCACATAGAATAGAACAAATGGTGGCAAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377765.8
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGCGCCGAAGCCATCTaGCCACCATTTGTTCTATTC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASAEAI*PPFVLF
Trigger: GAATAGAACAAATGGTGGCAAGATGGCTTCGGCGCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGCTAATCCCATACTaGGCTCCAACTAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWLIPY*APTRRA
Trigger: TGCCCTTCTAGTTGGAGCCAAGTATGGGATTAGCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGCCACATTCCCAACATaGCGGCCACAAGAATGTGAA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAATFPT*RPQECE
Trigger: TTCACATTCTTGTGGCCGCAATGTTGGGAATGTGGC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGGCTCATTGTTCATTaGGAGGATCTGATCACCAGG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARLIVH*EDLITR
Trigger: CCTGGTGATCAGATCCTCCAAATGAACAATGAGCCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTATAGCTTGAGCACGTaGGGCATACACAGCAGAGAA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAYSLST*GIHSRE
Trigger: TTCTCTGCTGTGTATGCCCAACGTGCTCAAGCTATA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTTCTCCAAGTATAGCTaGAGCACGTTGGGCATACAC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAFSKYS*STLGIH
Trigger: GTGTATGCCCAACGTGCTCAAGCTATACTTGGAGAA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTTCCACCATATGTCTaGAGTTCTCCGAGGATCTGT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALPPYV*SSPRIC
Trigger: ACAGATCCTCGGAGAACTCAAGACATATGGTGGAAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAGGTCTTTTGCACTGTaGGATTCCAGCAGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGARSFAL*DSSSKV
Trigger: GACTTTGCTGCTGGAATCCAACAGTGCAAAAGACCT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTGGAGGAGGGTGTCTTaGTCTATCTTTACTGTGTGT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAWRRVS*SIFTVC
Trigger: ACACACAGTAAAGATAGACAAAGACACCCTCCTCCA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGAATTCTCTTTATTGTaGGGGTCAATCCGGAAGCGA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAEFSLL*GSIRKR
Trigger: TCGCTTCCGGATTGACCCCAACAATAAAGAGAATTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCAGAATTCTCTTTATaGTTGGGGTCAATCCGGAAG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPEFSL*LGSIRK
Trigger: CTTCCGGATTGACCCCAACAATAAAGAGAATTCTGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCTGTGAAACATTATTaGACACATCACCCGGGGAGT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASVKHY*THHPGS
Trigger: ACTCCCCGGGTGATGTGTCAAATAATGTTTCACAGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 90 bp TCCTTGTGGCTCTTCCTTTGTAGGGATAGAAGCTATCTTCTCTCCTaGATTTATTCCACATTCATCACTTCTAGGCTCATCTCTAGGAGA +
Preference number: 5 (lower is better)
Translates to: SLWLFLCRDRSYLLS*IYSTFITSRLISRR
Trigger: TCTCCTAGAGATGAGCCTAGAAGTGATGAATGTGGAATAAATCCAGGAGAGAAGATAGCTTCTATCCCTACAAAGGAAGAGCCACAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTTCAAACTTGAAAGCTTaGGTCTGTCCATTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGASNLKA*VCPFSK
Trigger: CTTGGAGAATGGACAGACCAAAGCTTTCAAGTTTGA...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAAAGGCTCTGTGTATTaGGGGGCAGTTTCTTGTATA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAKGSVY*GAVSCI
Trigger: TATACAAGAAACTGCCCCCAAATACACAGAGCCTTT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCTATATAGTAAACATTaGAAGAGGGTGGGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGALYSKH*KRVGGR
Trigger: TCTCCCACCCACCCTCTTCAAATGTTTACTATATAG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTCCATCTTGCCACCATTaGTTCTATTCTATGTGCTTT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAPSCHH*FYSMCF
Trigger: AAAGCACATAGAATAGAACAAATGGTGGCAAGATGG...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTATGTTGAGTTTGCTATaGATAACCTGGCTAATCCCA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGAMLSLL*ITWLIP
Trigger: TGGGATTAGCCAGGTTATCAATAGCAAACTCAACAT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTGACATGATGTTGAGTTaGCTATTGATAACCTGGCTA +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGADMMLS*LLITWL
Trigger: TAGCCAGGTTATCAATAGCAAACTCAACATCATGTC...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTACGTTGGTGCCATTTTaGTTTGTAACTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGATLVPF*FVTSLS
Trigger: AGACAGAGAAGTTACAAACAAAAATGGCACCAACGT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 90 bp GGAGACAACAAAGGCTCTGTGTATTTGGGGGCAGTTTCTTGTATATaGTTTGTACAAAAAGATTCCAATCCCATTTCCAACTGGACATGG +
Preference number: 5 (lower is better)
Translates to: GDNKGSVYLGAVSCI*FVQKDSNPISNWTW
Trigger: CCATGTCCAGTTGGAAATGGGATTGGAATCTTTTTGTACAAATCATATACAAGAAACTGCCCCCAAATACACAGAGCCTTTGTTGTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS-3UTR CAA 90 bp AATACTCTATATAGTAAACATTTGAAGAGGGTGGGTGGGAGAGTGGAAGGGGCTAATGTGGACATGATGTaGAGTTTGCTATTGATAACC +
Preference number: 5 (lower is better)
Translates to: NTLYSKHLKRVGGRVEGANVDMM*SLLLIT
Trigger: GGTTATCAATAGCAAACTCAACATCATGTCCACATT...AGCCCCTTCCACTCTCCCACCCACCCTCTTCAAATGTTTACTATATAGAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp GGAGGTGCCGCCCGCGCGGACAAGGACCTAGCGGGCTaGCGCTCTCGGAGAAGGGCGGCCCCGCCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: GGAARADKDLAG*RSRRRAAPPSG
Trigger: GCCGCTGGGCGGGGCCGCCCTTCTCCGAGAGCGTCAGCCCGCTAGGTCCTTGTCCGCGCGGGCGGCACCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377765.8
CDS TCA 72 bp CTGTGCCGGGCGGAGCAGCGGCTACAGTCTGTGAACTaGAAGCACAGGCCGGCCAGCTGGACCAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LCRAEQRLQSVN*KHRPASWTRCW
Trigger: CCAGCACCTGGTCCAGCTGGCCGGCCTGTGCTTTCAGTTCACAGACTGTAGCCGCTGCTCCGCCCGGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GAGGGTCTGAGTTGGGTTCCTGGCGGGCCCATCAGCTaGAGCAACTTTAGCCCGGGCCGAGCTGTCCCGGGA +
Preference number: 6 (lower is better)
Translates to: EGLSWVPGGPIS*SNFSPGRAVPG
Trigger: TCCCGGGACAGCTCGGCCCGGGCTAAAGTTGCTGCAGCTGATGGGCCCGCCAGGAACCCAACTCAGACCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359927.3
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp GCCACTGGTCCTGTAGCCGCGGCTCTCAGTGTTGGCTaGGTCGGACGCCTCGGACTCGGCACTGTCTGTCGT +
Preference number: 6 (lower is better)
Translates to: ATGPVAAALSVG*VGRLGLGTVCR
Trigger: ACGACAGACAGTGCCGAGTCCGAGGCGTCCGACTCAGCCAACACTGAGAGCCGCGGCTACAGGACCAGTGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp TCGAGCCACTGGTCCTGTAGCCGCGGCTCTCAGTGTTaGCTGAGTCGGACGCCTCGGACTCGGCACTGTCTG +
Preference number: 6 (lower is better)
Translates to: SSHWSCSRGSQC*LSRTPRTRHCL
Trigger: CAGACAGTGCCGAGTCCGAGGCGTCCGACTCAGCCAACACTGAGAGCCGCGGCTACAGGACCAGTGGCTCGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp CCCGGAACTTCTGGGTCAAACAGAACACGGCGGCCGTaGGGGCCGTGCACTGACGGGCCAGGAGTTTCACAC +
Preference number: 6 (lower is better)
Translates to: PGTSGSNRTRRP*GPCTDGPGVSH
Trigger: GTGTGAAACTCCTGGCCCGTCAGTGCACGGCCCTCACGGCCGCCGTGTTCTGTTTGACCCAGAAGTTCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp AGGCTCACCCTGCATGTCCTGCAGAGAGGACACAGTTaGGGAGGGTGCACCAAGGGCCAGGTAGGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: RLTLHVLQRGHS*GGCTKGQVGLP
Trigger: AGGGAGCCCTACCTGGCCCTTGGTGCACCCTCCCCAACTGTGTCCTCTCTGCAGGACATGCAGGGTGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp CCAGAAGGCCAGGCTCACCCTGCATGTCCTGCAGAGAGGACACAGTaGGGGAGGGTGCACCAAGGGCCAGGTAGGGCTCCCTGTCATAGT +
Preference number: 6 (lower is better)
Translates to: PEGQAHPACPAERTQ*GRVHQGPGRAPCHS
Trigger: ACTATGACAGGGAGCCCTACCTGGCCCTTGGTGCACCCTCCCCAACTGTGTCCTCTCTGCAGGACATGCAGGGTGAGCCTGGCCTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp CGGCCCCCTGCATCTCTTCGGGGGACTGGTCCATTCTaGTCACATGCCGACAGCTCGACAGGAGCTTCTGGG +
Preference number: 6 (lower is better)
Translates to: RPPASLRGTGPF*SHADSSTGASG
Trigger: CCCAGAAGCTCCTGTCGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCCCCGAAGAGATGCAGGGGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GCCCTTGGGCCGTTGACCTGTTTACAGGGCCGTGGATaGCCGGAACTTCTGGGTCAAACAGAACACGGCGGC +
Preference number: 6 (lower is better)
Translates to: ALGPLTCLQGRG*PELLGQTEHGG
Trigger: GCCGCCGTGTTCTGTTTGACCCAGAAGTTCCGGGCATCCACGGCCCTGTAAACAGGTCAACGGCCCAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GGGCCCCCTCCTCACAGGAGCATGACCCTCCTCATCTaGGGATACTGGGCAGCTGCAGCTATGCCTGTCAAC +
Preference number: 6 (lower is better)
Translates to: GPPPHRSMTLLI*GYWAAAAMPVN
Trigger: GTTGACAGGCATAGCTGCAGCTGCCCAGTATCCGCAGATGAGGAGGGTCATGCTCCTGTGAGGAGGGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS CCA 72 bp GTGTCACGCACGGCCCCCTGCATCTCTTCGGGGGACTaGTCCATTCTGATCACATGCCGACAGCTCGACAGG +
Preference number: 6 (lower is better)
Translates to: VSRTAPCISSGD*SILITCRQLDR
Trigger: CCTGTCGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCCCCGAAGAGATGCAGGGGGCCGTGCGTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp TTCTTGAGCCTGGCAGCCTTGCCCTGGGGGTTCTCTGCTCTGTCCTaGAGGGTCTCTAGGGGGATGTGGTGGGATCTGCTCGGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: FLSLAALPWGFSALS*RVSRGMWWDLLGPC
Trigger: ACAGGGACCGAGCAGATCCCACCACATCCCCCTAGAGACCCTCAAGGACAGAGCAGAGAACCCCCAGGGCAAGGCTGCCAGGCTCAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp CCTCTTCCAGAGCGTCCATGGACTCACTCGAGCCACTaGTCCTGTAGCCGCGGCTCTCAGTGTTGGCTGAGT +
Preference number: 6 (lower is better)
Translates to: PLPERPWTHSSH*SCSRGSQCWLS
Trigger: ACTCAGCCAACACTGAGAGCCGCGGCTACAGGACCAGTGGCTCGAGTGAGTCCATGGACGCTCTGGAAGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp GGAGGCCCTTGGGCCGTTGACCTGTTTACAGGGCCGTaGATGCCCGGAACTTCTGGGTCAAACAGAACACGG +
Preference number: 6 (lower is better)
Translates to: GGPWAVDLFTGP*MPGTSGSNRTR
Trigger: CCGTGTTCTGTTTGACCCAGAAGTTCCGGGCATCCACGGCCCTGTAAACAGGTCAACGGCCCAAGGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp CAGCCTGGGGTCCAGCCTGACTGTGCTCAGTTCTGGTaGCCAGCCAAATGTCTCCAAAGCAGCACTCTCGGA +
Preference number: 6 (lower is better)
Translates to: QPGVQPDCAQFW*PAKCLQSSTLG
Trigger: TCCGAGAGTGCTGCTTTGGAGACATTTGGCTGGGCACCAGAACTGAGCACAGTCAGGCTGGACCCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp CCTAGGGGCTATATCTTGCCCTGTCACATGGTTAGGTaGCTCTGCCTTGATCCCCTCTGGAGGGACGGCTGG +
Preference number: 6 (lower is better)
Translates to: PRGYILPCHMVR*LCLDPLWRDGW
Trigger: CCAGCCGTCCCTCCAGAGGGGATCAAGGCAGAGGCACCTAACCATGTGACAGGGCAAGATATAGCCCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp AGCAGGTGTCTAAGTCATCCTCTTCCAGAGCGTCCATaGACTCACTCGAGCCACTGGTCCTGTAGCCGCGGC +
Preference number: 6 (lower is better)
Translates to: SRCLSHPLPERP*THSSHWSCSRG
Trigger: GCCGCGGCTACAGGACCAGTGGCTCGAGTGAGTCCATGGACGCTCTGGAAGAGGATGACTTAGACACCTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp CTCCTGGCTGTCAGAGTCAATGCTCTCTGCGAGGCCTaGCGAGCCAAAGTGGAAGAAGGTGGACCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: LLAVRVNALCEA*RAKVEEGGPAG
Trigger: TCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGAGCATTGACTCTGACAGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp GTCTCCAAAGCAGCACTCTCGGAAAACTCTGTCTTCTaGCACTGGGGGTTGGCTCTCTGGGCCAGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: VSKAALSENSVF*HWGLALWARSR
Trigger: CCTGGACCTGGCCCAGAGAGCCAACCCCCAGTGCCAGAAGACAGAGTTTTCCGAGAGTGCTGCTTTGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp GGGCTGTCCCTAGGGGCTATATCTTGCCCTGTCACATaGTTAGGTGCCTCTGCCTTGATCCCCTCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: GLSLGAISCPVT*LGASALIPSGG
Trigger: CCCTCCAGAGGGGATCAAGGCAGAGGCACCTAACCATGTGACAGGGCAAGATATAGCCCCTAGGGACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp CTTCCTCTGTCTCAGGCTGCGGGCCACGGAAGCATGTaGCATAGGAGAACTGACAGCTGCACTGGTCCATCC +
Preference number: 6 (lower is better)
Translates to: LPLSQAAGHGSM*HRRTDSCTGPS
Trigger: GGATGGACCAGTGCAGCTGTCAGTTCTCCTATGCCACATGCTTCCGTGGCCCGCAGCCTGAGACAGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp CAAGTAAAACCGACTGCCAGGCCATGTGGGCAAAGTTaGGTGGTATCTCTGTGGCACGGGCCCCCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: QVKPTARPCGQS*VVSLWHGPPPH
Trigger: GTGAGGAGGGGGCCCGTGCCACAGAGATACCACCCAACTTTGCCCACATGGCCTGGCAGTCGGTTTTACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS CAA 72 bp CCCGGGCCGAGCTGTCCCGGGAGCGCCGAAGCCATCTaGCCACCATTTGTTCTATTCTATGTGCTTTCCGTG +
Preference number: 6 (lower is better)
Translates to: PGPSCPGSAEAI*PPFVLFYVLSV
Trigger: CACGGAAAGCACATAGAATAGAACAAATGGTGGCAAGATGGCTTCGGCGCTCCCGGGACAGCTCGGCCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359927.3
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp CCAAGTAAAACCGACTGCCAGGCCATGTGGGCAAAGTaGGGTGGTATCTCTGTGGCACGGGCCCCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: PSKTDCQAMWAK*GGISVARAPSS
Trigger: TGAGGAGGGGGCCCGTGCCACAGAGATACCACCCAACTTTGCCCACATGGCCTGGCAGTCGGTTTTACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS CAA 90 bp TCGATAAGCCCAAGTAAAACCGACTGCCAGGCCATGTGGGCAAAGTaGGGTGGTATCTCTGTGGCACGGGCCCCCTCCTCACAGGAGCAT +
Preference number: 6 (lower is better)
Translates to: SISPSKTDCQAMWAK*GGISVARAPSSQEH
Trigger: ATGCTCCTGTGAGGAGGGGGCCCGTGCCACAGAGATACCACCCAACTTTGCCCACATGGCCTGGCAGTCGGTTTTACTTGGGCTTATCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS GCA 72 bp CCGGGCCGAGCTGTCCCGGGAGCGCCGAAGCCATCTTaGCACCATTTGTTCTATTCTATGTGCTTTCCGTGT +
Preference number: 6 (lower is better)
Translates to: PGRAVPGAPKPS*HHLFYSMCFPC
Trigger: ACACGGAAAGCACATAGAATAGAACAAATGGTGGCAAGATGGCTTCGGCGCTCCCGGGACAGCTCGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359927.3
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp CGAGGCCTGGCGAGCCAAAGTGGAAGAAGGTGGACCTaGTGGAGGAGCAGGTGTCTAAGTCATCCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: RGLASQSGRRWT*WRSRCLSHPLP
Trigger: TGGAAGAGGATGACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GGCCACGGAAGCATGTGGCATAGGAGAACTGACAGCTaGACTGGTCCATCCCTATCCTGGGAGCCACCATCT +
Preference number: 6 (lower is better)
Translates to: GHGSMWHRRTDS*TGPSLSWEPPS
Trigger: AGATGGTGGCTCCCAGGATAGGGATGGACCAGTGCAGCTGTCAGTTCTCCTATGCCACATGCTTCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GAGCCCATGCAGAGGCGGCTCCGGCTTTCGGTAAAGTaGCAGGTGCACTTCTCTGGGGGATGTTTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: EPMQRRLRLSVK*QVHFSGGCLFP
Trigger: TGGAAACAAACATCCCCCAGAGAAGTGCACCTGGCACTTTACCGAAAGCCGGAGCCGCCTCTGCATGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp TGCATCTCTTCGGGGGACTGGTCCATTCTGATCACATaGCGACAGCTCGACAGGAGCTTCTGGGAGCCCATG +
Preference number: 6 (lower is better)
Translates to: CISSGDWSILIT*RQLDRSFWEPM
Trigger: CATGGGCTCCCAGAAGCTCCTGTCGAGCTGTCGGCATGTGATCAGAATGGACCAGTCCCCCGAAGAGATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp GGCCTGGCGAGCCAAAGTGGAAGAAGGTGGACCTGCTaGAGGAGCAGGTGTCTAAGTCATCCTCTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: GLASQSGRRWTC*RSRCLSHPLPE
Trigger: CTCTGGAAGAGGATGACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp TCTCTGCGAGGCCTGGCGAGCCAAAGTGGAAGAAGGTaGACCTGCTGGAGGAGCAGGTGTCTAAGTCATCCT +
Preference number: 6 (lower is better)
Translates to: SLRGLASQSGRR*TCWRSRCLSHP
Trigger: AGGATGACTTAGACACCTGCTCCTCCAGCAGGTCCACCTTCTTCCACTTTGGCTCGCCAGGCCTCGCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp AGGAAGCCACTGGTTTCAATCCCGCTTCTCTCCTCCTaGCTGTCAGAGTCAATGCTCTCTGCGAGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: RKPLVSIPLLSS*LSESMLSARPG
Trigger: GCCAGGCCTCGCAGAGAGCATTGACTCTGACAGCCAGGAGGAGAGAAGCGGGATTGAAACCAGTGGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp CCTCACAGGAGCATGACCCTCCTCATCTGCGGATACTaGGCAGCTGCAGCTATGCCTGTCAACATGTCTGGC +
Preference number: 6 (lower is better)
Translates to: PHRSMTLLICGY*AAAAMPVNMSG
Trigger: GCCAGACATGTTGACAGGCATAGCTGCAGCTGCCCAGTATCCGCAGATGAGGAGGGTCATGCTCCTGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS TCA 72 bp TCTATCTTTACTGTGTGTCGCACAGGGATGAGGGTCTaGGTTGGGTTCCTGGCGGGCCCATCAGCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SIFTVCRTGMRV*VGFLAGPSAAA
Trigger: TGCTGCAGCTGATGGGCCCGCCAGGAACCCAACTCAGACCCTCATCCCTGTGCGACACACAGTAAAGATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359927.3
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp GGAGGTCCAGGGGGTCCTTGGGAACAAAACAGACCCTaGAGAGGCAGCGGTAGTCATGTGACTCCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: GGPGGPWEQNRP*RGSGSHVTPPF
Trigger: AAAGGGAGGAGTCACATGACTACCGCTGCCTCTTCAGGGTCTGTTTTGTTCCCAAGGACCCCCTGGACCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GCTTATCAGCCGCGTCATAGTATTCCTCATCTGAGCTaGCATCCTCAAAGGCCAGTGGTGGGTGCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: AYQPRHSIPHLS*HPQRPVVGAGP
Trigger: TGGCCCTGCACCCACCACTGGCCTTTGAGGATGGCAGCTCAGATGAGGAATACTATGACGCGGCTGATAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp CTTTACTGTGTGTCGCACAGGGATGAGGGTCTGAGTTaGGTTCCTGGCGGGCCCATCAGCTGCAGCAACTTT +
Preference number: 6 (lower is better)
Translates to: LYCVSHRDEGLS*VPGGPISCSNF
Trigger: AAAGTTGCTGCAGCTGATGGGCCCGCCAGGAACCCAACTCAGACCCTCATCCCTGTGCGACACACAGTAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359927.3
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp ATACAGCCTGGGGTCCAGCCTGACTGTGCTCAGTTCTaGTGCCCAGCCAAATGTCTCCAAAGCAGCACTCTC +
Preference number: 6 (lower is better)
Translates to: IQPGVQPDCAQF*CPAKCLQSSTL
Trigger: GAGAGTGCTGCTTTGGAGACATTTGGCTGGGCACCAGAACTGAGCACAGTCAGGCTGGACCCCAGGCTGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp TTCTCTGCTCTGTCCTTGAGGGTCTCTAGGGGGATGTaGTGGGATCTGCTCGGTCCCTGTTACAGGAGCATC +
Preference number: 6 (lower is better)
Translates to: FSALSLRVSRGM*WDLLGPCYRSI
Trigger: GATGCTCCTGTAACAGGGACCGAGCAGATCCCACCACATCCCCCTAGAGACCCTCAAGGACAGAGCAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp TCGATAAGCCCAAGTAAAACCGACTGCCAGGCCATGTaGGCAAAGTTGGGTGGTATCTCTGTGGCACGGGCC +
Preference number: 6 (lower is better)
Translates to: SISPSKTDCQAM*AKLGGISVARA
Trigger: GGCCCGTGCCACAGAGATACCACCCAACTTTGCCCACATGGCCTGGCAGTCGGTTTTACTTGGGCTTATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS TCA 72 bp AGGTTCGAGTACGCAGTCCACCTCAGAGGACTCCTCTaGGTCACTGCAGGCCCTGGATTCATAGCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RFEYAVHLRGLL*VTAGPGFIAFF
Trigger: GAAGAAGGCTATGAATCCAGGGCCTGCAGTGACTCAGAGGAGTCCTCTGAGGTGGACTGCGTACTCGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp TGCCTCTGCCTTGATCCCCTCTGGAGGGACGGCTGGTaGAACTGTCTGCTTCCCAAGAAAGAAATCAGGGTC +
Preference number: 6 (lower is better)
Translates to: CLCLDPLWRDGW*NCLLPKKEIRV
Trigger: GACCCTGATTTCTTTCTTGGGAAGCAGACAGTTTCACCAGCCGTCCCTCCAGAGGGGATCAAGGCAGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp TCTTCGTGCAGCAGGTGCAGCCGGGAGATGCTGTACTaGTCTTCCAGGGCCAGTGCAAAGTACTCGATACTT +
Preference number: 6 (lower is better)
Translates to: SSCSRCSREMLY*SSRASAKYSIL
Trigger: AAGTATCGAGTACTTTGCACTGGCCCTGGAAGAGCAGTACAGCATCTCCCGGCTGCACCTGCTGCACGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp TGTCTTTGTCTATCTTTACTGTGTGTCGCACAGGGATaGGGGTCTGAGTTGGGTTCCTGGCGGGCCCATCAG +
Preference number: 6 (lower is better)
Translates to: CLCLSLLCVAQG*GSELGSWRAHQ
Trigger: CTGATGGGCCCGCCAGGAACCCAACTCAGACCCTCATCCCTGTGCGACACACAGTAAAGATAGACAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp AGTGAGCTTATCAGCCGCGTCATAGTATTCCTCATCTaGGCTGCCATCCTCAAAGGCCAGTGGTGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SELISRVIVFLI*AAILKGQWWVQ
Trigger: CTGCACCCACCACTGGCCTTTGAGGATGGCAGCTCAGATGAGGAATACTATGACGCGGCTGATAAGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp CATTCATGCCTGCAAAACCCAAAGATGTGGCCACCCTaGGACTGGCAGAGACTTCAGGATGGCTTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: HSCLQNPKMWPP*DWQRLQDGFLG
Trigger: CCCCAGAAAGCCATCCTGAAGTCTCTGCCAGTCTCAGGGTGGCCACATCTTTGGGTTTTGCAGGCATGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp CTTGAGCCAGTCGAGAGAGGAAACCCTAGAGGTCCTTaGTTGGCAAACTGGCTTCCTCTGTGCCAAGGGCAA +
Preference number: 6 (lower is better)
Translates to: LEPVERGNPRGP*LANWLPLCQGQ
Trigger: TTGCCCTTGGCACAGAGGAAGCCAGTTTGCCAATCAAGGACCTCTAGGGTTTCCTCTCTCGACTGGCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS GCA 72 bp TGGCTGTGTCCACTGATGAGCACTTCTTCAGCAAAGTaGACCTTCACGGGGTTGGTCTTCAGTCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: WLCPLMSTSSAK*TFTGLVFSLAL
Trigger: GAGAGCCAGACTGAAGACCAACCCCGTGAAGGTGCACTTTGCTGAAGAAGTGCTCATCAGTGGACACAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GATCCGTTCCTGGATGTGCAGAGCCGCGAGTCGGAGTaGAGAGCTACATTTCATTTCTACAGCAAAGCGCTC +
Preference number: 6 (lower is better)
Translates to: DPFLDVQSRESE*RATFHFYSKAL
Trigger: GAGCGCTTTGCTGTAGAAATGAAATGTAGCTCTGCACTCCGACTCGCGGCTCTGCACATCCAGGAACGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS GCA 72 bp GTACGCAGTCCACCTCAGAGGACTCCTCTGAGTCACTaGAGGCCCTGGATTCATAGCCTTCTTCTGCAGATA +
Preference number: 6 (lower is better)
Translates to: VRSPPQRTPLSH*RPWIHSLLLQI
Trigger: TATCTGCAGAAGAAGGCTATGAATCCAGGGCCTGCAGTGACTCAGAGGAGTCCTCTGAGGTGGACTGCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp AGGAGAACTGACAGCTGCACTGGTCCATCCCTATCCTaGGAGCCACCATCTCATTCATGCCTGCAAAACCCA +
Preference number: 6 (lower is better)
Translates to: RRTDSCTGPSLS*EPPSHSCLQNP
Trigger: TGGGTTTTGCAGGCATGAATGAGATGGTGGCTCCCAGGATAGGGATGGACCAGTGCAGCTGTCAGTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp AGCCAGTCGAGAGAGGAAACCCTAGAGGTCCTTGATTaGCAAACTGGCTTCCTCTGTGCCAAGGGCAACACA +
Preference number: 6 (lower is better)
Translates to: SQSREETLEVLD*QTGFLCAKGNT
Trigger: TGTGTTGCCCTTGGCACAGAGGAAGCCAGTTTGCCAATCAAGGACCTCTAGGGTTTCCTCTCTCGACTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539465.5
CDS CAA 90 bp GACTGCTCGTTCCCAGGAAAGGTCTTCAGCAGGCTCATTGTTCATTaGGAGGATCTGATCACCAGGGAAAAGCTTGCCGTGAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: DCSFPGKVFSRLIVH*EDLITREKLAVSRA
Trigger: GGCTCTGCTCACGGCAAGCTTTTCCCTGGTGATCAGATCCTCCAAATGAACAATGAGCCTGCTGAAGACCTTTCCTGGGAACGAGCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp TGTCCACTGATGAGCACTTCTTCAGCAAAGTGCACCTTCACGGGGTaGGTCTTCAGTCTGGCTCTCTTCTCCTCGGTCAGGAAGGACGAT +
Preference number: 6 (lower is better)
Translates to: CPLMSTSSAKCTFTG*VFSLALFSSVRKDD
Trigger: ATCGTCCTTCCTGACCGAGGAGAAGAGAGCCAGACTGAAGACCAACCCCGTGAAGGTGCACTTTGCTGAAGAAGTGCTCATCAGTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp GCAGGCCCTGGATTCATAGCCTTCTTCTGCAGATACCCGGTGCGCTaGTTGTTTGTTTCCAGGCCAGAGGAAAATGGAGGTAACTGGGTC +
Preference number: 6 (lower is better)
Translates to: AGPGFIAFFCRYPVR*LFVSRPEENGGNWV
Trigger: GACCCAGTTACCTCCATTTTCCTCTGGCCTGGAAACAAACAACAAGCGCACCGGGTATCTGCAGAAGAAGGCTATGAATCCAGGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp GGTCACCACTGGAGAGGGAGAAGGAGCTGTCTCCATGCTCTATGGTaGGTTCTTTGGGGGCAATCCCATCCAGGTCTTGAGATAGAGGTA +
Preference number: 6 (lower is better)
Translates to: GHHWRGRRSCLHALW*VLWGQSHPGLEIEV
Trigger: TACCTCTATCTCAAGACCTGGATGGGATTGCCCCCAAAGAACCAACCATAGAGCATGGAGACAGCTCCTTCTCCCTCTCCAGTGGTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp CCAGGTCTTGAGATAGAGGTAAGATTTGGGAAGGCCTaGCCTGAGCAGTATCTGGGCCAGATGAACCTGGGT +
Preference number: 6 (lower is better)
Translates to: PGLEIEVRFGKA*PEQYLGQMNLG
Trigger: ACCCAGGTTCATCTGGCCCAGATACTGCTCAGGCAAGGCCTTCCCAAATCTTACCTCTATCTCAAGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp GGCCCTGGATTCATAGCCTTCTTCTGCAGATACCCGGTGCGCTTGTaGTTTGTTTCCAGGCCAGAGGAAAATGGAGGTAACTGGGTCAAC +
Preference number: 6 (lower is better)
Translates to: GPGFIAFFCRYPVRL*FVSRPEENGGNWVN
Trigger: GTTGACCCAGTTACCTCCATTTTCCTCTGGCCTGGAAACAAACAACAAGCGCACCGGGTATCTGCAGAAGAAGGCTATGAATCCAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp GGGTCTAAATCCAACTCTACGAATAGTTTTTGTTCTTaGGCCTGGCAGCCTTGCCCTGGGGGTTCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: GSKSNSTNSFCS*AWQPCPGGSLL
Trigger: GAGCAGAGAACCCCCAGGGCAAGGCTGCCAGGCTCAAGAACAAAAACTATTCGTAGAGTTGGATTTAGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp TACCCAGCAATCAGGCAGGCTAGGTCTTTTGCACTGTaGGATTCCAGCAGCAAAGTCAGAACCTTGACGTCC +
Preference number: 6 (lower is better)
Translates to: YPAIRQARSFAL*DSSSKVRTLTS
Trigger: GGACGTCAAGGTTCTGACTTTGCTGCTGGAATCCAACAGTGCAAAAGACCTAGCCTGCCTGATTGCTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp GCCTGTAGTACCCAGCAATCAGGCAGGCTAGGTCTTTaGCACTGTTGGATTCCAGCAGCAAAGTCAGAACCT +
Preference number: 6 (lower is better)
Translates to: ACSTQQSGRLGL*HCWIPAAKSEP
Trigger: AGGTTCTGACTTTGCTGCTGGAATCCAACAGTGCAAAAGACCTAGCCTGCCTGATTGCTGGGTACTACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp GCTGAGGAGCTGGCAGCAGGGACAACACCAGAATTCTCTTTATTGTaGGGGTCAATCCGGAAGCGAATGGCAGAAATAGAAGACACTCGA +
Preference number: 6 (lower is better)
Translates to: AEELAAGTTPEFSLL*GSIRKRMAEIEDTR
Trigger: TCGAGTGTCTTCTATTTCTGCCATTCGCTTCCGGATTGACCCCAACAATAAAGAGAATTCTGGTGTTGTCCCTGCTGCCAGCTCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp GGATTCATAGCCTTCTTCTGCAGATACCCGGTGCGCTaGTTGTTTGTTTCCAGGCCAGAGGAAAATGGAGGT +
Preference number: 6 (lower is better)
Translates to: GFIAFFCRYPVR*LFVSRPEENGG
Trigger: ACCTCCATTTTCCTCTGGCCTGGAAACAAACAACAAGCGCACCGGGTATCTGCAGAAGAAGGCTATGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp TTGTTTGTTTCCAGGCCAGAGGAAAATGGAGGTAACTaGGTCAACCAACAGCCTGTAGTACCCAGCAATCAG +
Preference number: 6 (lower is better)
Translates to: LFVSRPEENGGN*VNQQPVVPSNQ
Trigger: CTGATTGCTGGGTACTACAGGCTGTTGGTTGACCCAGTTACCTCCATTTTCCTCTGGCCTGGAAACAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp GAGCTGGCAGCAGGGACAACACCAGAATTCTCTTTATaGTTGGGGTCAATCCGGAAGCGAATGGCAGAAATA +
Preference number: 6 (lower is better)
Translates to: ELAAGTTPEFSL*LGSIRKRMAEI
Trigger: TATTTCTGCCATTCGCTTCCGGATTGACCCCAACAATAAAGAGAATTCTGGTGTTGTCCCTGCTGCCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp TTCACGGTGAGGATGATGTCCTTCACGGTTGTGTTTGCCTCAAACTaGAAAGCTTTGGTCTGTCCATTCTCCAAGTATAGCTTGAGCACG +
Preference number: 6 (lower is better)
Translates to: FTVRMMSFTVVFASN*KALVCPFSKYSLST
Trigger: CGTGCTCAAGCTATACTTGGAGAATGGACAGACCAAAGCTTTCAAGTTTGAGGCAAACACAACCGTGAAGGACATCATCCTCACCGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp TTTAGGGACTCCCGACGTGCAGCGAACAACTGTGATTaGAAGAGAATCTTCTGCTTCCCTGAGAATATCGAC +
Preference number: 6 (lower is better)
Translates to: FRDSRRAANNCD*KRIFCFPENID
Trigger: GTCGATATTCTCAGGGAAGCAGAAGATTCTCTTTCAATCACAGTTGTTCGCTGCACGTCGGGAGTCCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS TCA 72 bp AATGGCAGAAATAGAAGACACTCGAGAGTCGATGACTaGTTTGGTTTCCATGGTCTCGGGCTCCATCTCCAT +
Preference number: 6 (lower is better)
Translates to: NGRNRRHSRVDD*FGFHGLGLHLH
Trigger: ATGGAGATGGAGCCCGAGACCATGGAAACCAAATCAGTCATCGACTCTCGAGTGTCTTCTATTTCTGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp CTGGCAGCAGGGACAACACCAGAATTCTCTTTATTGTaGGGGTCAATCCGGAAGCGAATGGCAGAAATAGAA +
Preference number: 6 (lower is better)
Translates to: LAAGTTPEFSLL*GSIRKRMAEIE
Trigger: TTCTATTTCTGCCATTCGCTTCCGGATTGACCCCAACAATAAAGAGAATTCTGGTGTTGTCCCTGCTGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp AGGATGATGTCCTTCACGGTTGTGTTTGCCTCAAACTTGAAAGCTTaGGTCTGTCCATTCTCCAAGTATAGCTTGAGCACGTTGGGCATA +
Preference number: 6 (lower is better)
Translates to: RMMSFTVVFASNLKA*VCPFSKYSLSTLGI
Trigger: TATGCCCAACGTGCTCAAGCTATACTTGGAGAATGGACAGACCAAAGCTTTCAAGTTTGAGGCAAACACAACCGTGAAGGACATCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp TTGAAAGCTTTGGTCTGTCCATTCTCCAAGTATAGCTaGAGCACGTTGGGCATACACAGCAGAGAATTACCC +
Preference number: 6 (lower is better)
Translates to: LKALVCPFSKYS*STLGIHSRELP
Trigger: GGGTAATTCTCTGCTGTGTATGCCCAACGTGCTCAAGCTATACTTGGAGAATGGACAGACCAAAGCTTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp CGGCTGATGTTTGCAAACTCTGCCAATGTGGACATGATGTTGAGTTaGCTATTGATAACCTGGCTAATCCCATACTTGGCTCCAACTAGA +
Preference number: 6 (lower is better)
Translates to: RLMFANSANVDMMLS*LLITWLIPYLAPTR
Trigger: TCTAGTTGGAGCCAAGTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTTTGCAAACATCAGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp TCTACACGGCTGATGTTTGCAAACTCTGCCAATGTGGACATGATGTaGAGTTTGCTATTGATAACCTGGCTAATCCCATACTTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: STRLMFANSANVDMM*SLLLITWLIPYLAP
Trigger: TGGAGCCAAGTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTTTGCAAACATCAGCCGTGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp GCCACCATTTGTTCTATTCTATGTGCTTTCCGTGTCTaGAATAAACTGGTCTCCAGCTCTTCCATTTACCTC +
Preference number: 6 (lower is better)
Translates to: ATICSILCAFRV*NKLVSSSSIYL
Trigger: GAGGTAAATGGAAGAGCTGGAGACCAGTTTATTCCAGACACGGAAAGCACATAGAATAGAACAAATGGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359927.3
CDS CCA 72 bp GCCACCATTTGTTCTATTCTATGTGCTTTCCGTGTCTaGAATAAACTGGTCTCCAGCTCTTCCATTTACCTG +
Preference number: 6 (lower is better)
Translates to: ATICSILCAFRV*NKLVSSSSIYL
Trigger: CAGGTAAATGGAAGAGCTGGAGACCAGTTTATTCCAGACACGGAAAGCACATAGAATAGAACAAATGGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377765.8
CDS CAA 72 bp AGGATGATGTCCTTCACGGTTGTGTTTGCCTCAAACTaGAAAGCTTTGGTCTGTCCATTCTCCAAGTATAGC +
Preference number: 6 (lower is better)
Translates to: RMMSFTVVFASN*KALVCPFSKYS
Trigger: GCTATACTTGGAGAATGGACAGACCAAAGCTTTCAAGTTTGAGGCAAACACAACCGTGAAGGACATCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp ATGTTTGCAAACTCTGCCAATGTGGACATGATGTTGAGTTTGCTATaGATAACCTGGCTAATCCCATACTTGGCTCCAACTAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: MFANSANVDMMLSLL*ITWLIPYLAPTRRA
Trigger: TGCCCTTCTAGTTGGAGCCAAGTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTTTGCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CCA 72 bp AATGTGGACATGATGTTGAGTTTGCTATTGATAACCTaGCTAATCCCATACTTGGCTCCAACTAGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: NVDMMLSLLLIT*LIPYLAPTRRA
Trigger: TGCCCTTCTAGTTGGAGCCAAGTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp AACTCTGCCAATGTGGACATGATGTTGAGTTTGCTATaGATAACCTGGCTAATCCCATACTTGGCTCCAACT +
Preference number: 6 (lower is better)
Translates to: NSANVDMMLSLL*ITWLIPYLAPT
Trigger: AGTTGGAGCCAAGTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp TTTGCAAACTCTGCCAATGTGGACATGATGTTGAGTTaGCTATTGATAACCTGGCTAATCCCATACTTGGCT +
Preference number: 6 (lower is better)
Translates to: FANSANVDMMLS*LLITWLIPYLA
Trigger: AGCCAAGTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTTTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp CTGATGTTTGCAAACTCTGCCAATGTGGACATGATGTaGAGTTTGCTATTGATAACCTGGCTAATCCCATAC +
Preference number: 6 (lower is better)
Translates to: LMFANSANVDMM*SLLLITWLIPY
Trigger: GTATGGGATTAGCCAGGTTATCAATAGCAAACTCAACATCATGTCCACATTGGCAGAGTTTGCAAACATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 90 bp TTCTGGTTCCTCTTCATGTGGAAGCTAATGGCTTTCTTGATGTCTTaGCCTTTCATGTTTCGGAGTAAAGTTGGAGATATAAAGTTCTCT +
Preference number: 6 (lower is better)
Translates to: FWFLFMWKLMAFLMS*PFMFRSKVGDIKFS
Trigger: AGAGAACTTTATATCTCCAACTTTACTCCGAAACATGAAAGGCAAAGACATCAAGAAAGCCATTAGCTTCCACATGAAGAGGAACCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5
CDS CAA 72 bp CTCTTCATGTGGAAGCTAATGGCTTTCTTGATGTCTTaGCCTTTCATGTTTCGGAGTAAAGTTGGAGATATA +
Preference number: 6 (lower is better)
Translates to: LFMWKLMAFLMS*PFMFRSKVGDI
Trigger: TATATCTCCAACTTTACTCCGAAACATGAAAGGCAAAGACATCAAGAAAGCCATTAGCTTCCACATGAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377765.8
ENST00000539465.5