Pregenerated sensors for FRMD7 (Homo sapiens)
Ensembl gene IDs: ENSG00000165694Ensembl transcript IDs: ENST00000298542.9, ENST00000370879.5, ENST00000464296.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | ATTCTCTTGAGAGGATCTATGCCACCACCTCCTTCCTaGGGCTGTAGGAGGGCCATGCTCTGCTTTTATATG | + |
|
Preference number: 3 (lower is better) Translates to: ILLRGSMPPPPS*GCRRAMLCFYM Trigger: CATATAAAAGCAGAGCATGGCCCTCCTACAGCCTCAGGAAGGAGGTGGTGGCATAGATCCTCTCAAGAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000298542.9 ENST00000370879.5 |
||
| CDS GCA 90 bp | TGTAGCATTCTCAGCGAGGCCGTTGGGCTGCAAGCAGGCTCAGAGTaGTGTGGGTGCTTTCTCCAGGAATTTCACTCCCAGCTGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSILSEAVGLQAGSE*CGCFLQEFHSQLDV Trigger: CACATCCAGCTGGGAGTGAAATTCCTGGAGAAAGCACCCACAGCACTCTGAGCCTGCTTGCAGCCCAACGGCCTCGCTGAGAATGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298542.9 |
||
| CDS GCA 90 bp | CATTGCAGTGGGCTCTACATAGCTATGTGGACTTGTCCTTTCCTCTaGTCTAATTGGGGACCATCTGGGCACCTGGGGTGGCTTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: HCSGLYIAMWTCPFL*SNWGPSGHLGWLVH Trigger: GTGGACAAGCCACCCCAGGTGCCCAGATGGTCCCCAATTAGAGCAGAGGAAAGGACAAGTCCACATAGCTATGTAGAGCCCACTGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS TCA 90 bp | CCAGGTGAATCTGCATCCCTTCACCATCACTGGCGGGGTGAGGCCTaGTGCCATACATATCCAGCTTCCTTGCTATGTCCAGTAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGESASLHHHWRGEA*CHTYPASLLCPVAE Trigger: TTCTGCTACTGGACATAGCAAGGAAGCTGGATATGTATGGCATCAGGCCTCACCCCGCCAGTGATGGTGAAGGGATGCAGATTCACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 90 bp | CTCTGGTTTGGAATGCTCCAGCTCAGTTGCAAATGTCACCTCCAATaGAGAATTCCTCCTCCTACTCTCCAGCACTGGCTCAGATGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LWFGMLQLSCKCHLQ*RIPPPTLQHWLRCV Trigger: CACGCATCTGAGCCAGTGCTGGAGAGTAGGAGGAGGAATTCTGCATTGGAGGTGACATTTGCAACTGAGCTGGAGCATTCCAAACCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 90 bp | CTCCAATGCAGAATTCCTCCTCCTACTCTCCAGCACTGGCTCAGATaGGTGCACTCCATTCACATTTTGGTAGTAGCCACCACCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: LQCRIPPPTLQHWLR*VHSIHILVVATTIC Trigger: GCATATGGTGGTGGCTACTACCAAAATGTGAATGGAGTGCACGCATCTGAGCCAGTGCTGGAGAGTAGGAGGAGGAATTCTGCATTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 90 bp | AAAACTGCACTTTTAAATGTAGCATTCTCAGCGAGGCCGTTGGGCTaGAAGCAGGCTCAGAGTGCTGTGGGTGCTTTCTCCAGGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KTALLNVAFSARPLG*KQAQSAVGAFSRNF Trigger: GAAATTCCTGGAGAAAGCACCCACAGCACTCTGAGCCTGCTTGCAGCCCAACGGCCTCGCTGAGAATGCTACATTTAAAAGTGCAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298542.9 |
||
| CDS TCA 90 bp | CCGCTAGTCCTGGCTATAGCTTCTTGGAGTACTTGCAGGTCTTGCTaGAAGCTCTTCATTCTGATATTCCTTGGGCTTCTTTCAGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVLAIASWSTCRSC*KLFILIFLGLLSAG Trigger: GCCAGCTGAAAGAAGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAAGACCTGCAAGTACTCCAAGAAGCTATAGCCAGGACTAGCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS TCA 90 bp | GGCAACTCCTGCTCTGCAAACATATCCGTAAACAGGTCTGCTTTATaGCTGAGAGCAGGACAAGGCCCTAAAGGTCTAAATTCTGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GNSCSANISVNRSAL*LRAGQGPKGLNSDP Trigger: TGGGTCAGAATTTAGACCTTTAGGGCCTTGTCCTGCTCTCAGTCATAAAGCAGACCTGTTTACGGATATGTTTGCAGAGCAGGAGTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 90 bp | CTTCCACTTGTTTTGACACATCAGAGAGGAGGTCTGGTGAGGACCTaGACTGTCGTTCATGGTACTGAGATGGGTAATGTTTCCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPLVLTHQRGGLVRT*TVVHGTEMGNVSFQ Trigger: TTGAAAGGAAACATTACCCATCTCAGTACCATGAACGACAGTGCAGGTCCTCACCAGACCTCCTCTCTGATGTGTCAAAACAAGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CCA 90 bp | GAGTACTTGCAGGTCTTGCTGAAAGCTCTTCATTCTGATATTCCTTaGGCTTCTTTCAGCTGGCTTCATTGCAGTGGGCTCTACATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EYLQVLLKALHSDIP*ASFSWLHCSGLYIA Trigger: AGCTATGTAGAGCCCACTGCAATGAAGCCAGCTGAAAGAAGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAAGACCTGCAAGTACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS TCA 90 bp | GCACATCCGTGTAAGTTAGCTGCTTTGCTGGACGCACTTTGCTTGTaGGGCCAGAATATATGCTCATGTGATTACCAGAAAACTTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHPCKLAALLDALCL*GQNICSCDYQKTYS Trigger: GCTGTAAGTTTTCTGGTAATCACATGAGCATATATTCTGGCCTCACAAGCAAAGTGCGTCCAGCAAAGCAGCTAACTTACACGGATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CCA 90 bp | TTGCTGAAAGCTCTTCATTCTGATATTCCTTGGGCTTCTTTCAGCTaGCTTCATTGCAGTGGGCTCTACATAGCTATGTGGACTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLKALHSDIPWASFS*LHCSGLYIAMWTCP Trigger: AGGACAAGTCCACATAGCTATGTAGAGCCCACTGCAATGAAGCCAGCTGAAAGAAGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 90 bp | CTGATTGTAAGATGTGAGATACCATCAACGCTGTACAGTTGTCACTaGATGGAAGCCTTCCTAGAGCCAAATCCTTCTTTATTTGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LIVRCEIPSTLYSCH*MEAFLEPNPSLFEE Trigger: CTCTTCAAATAAAGAAGGATTTGGCTCTAGGAAGGCTTCCATGCAGTGACAACTGTACAGCGTTGATGGTATCTCACATCTTACAATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 72 bp | CTCAGCGAGGCCGTTGGGCTGCAAGCAGGCTCAGAGTaGTGTGGGTGCTTTCTCCAGGAATTTCACTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSEAVGLQAGSE*CGCFLQEFHSQ Trigger: CTGGGAGTGAAATTCCTGGAGAAAGCACCCACAGCACTCTGAGCCTGCTTGCAGCCCAACGGCCTCGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298542.9 |
||
| CDS GCA 72 bp | GGGCTCTACATAGCTATGTGGACTTGTCCTTTCCTCTaGTCTAATTGGGGACCATCTGGGCACCTGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLYIAMWTCPFL*SNWGPSGHLGW Trigger: CCACCCCAGGTGCCCAGATGGTCCCCAATTAGAGCAGAGGAAAGGACAAGTCCACATAGCTATGTAGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS TCA 72 bp | TCTGCATCCCTTCACCATCACTGGCGGGGTGAGGCCTaGTGCCATACATATCCAGCTTCCTTGCTATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SASLHHHWRGEA*CHTYPASLLCP Trigger: TGGACATAGCAAGGAAGCTGGATATGTATGGCATCAGGCCTCACCCCGCCAGTGATGGTGAAGGGATGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 72 bp | CTTTTAAATGTAGCATTCTCAGCGAGGCCGTTGGGCTaGAAGCAGGCTCAGAGTGCTGTGGGTGCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLNVAFSARPLG*KQAQSAVGAFS Trigger: GGAGAAAGCACCCACAGCACTCTGAGCCTGCTTGCAGCCCAACGGCCTCGCTGAGAATGCTACATTTAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298542.9 |
||
| CDS CCA 72 bp | ATAGCTATGTGGACTTGTCCTTTCCTCTGCTCTAATTaGGGACCATCTGGGCACCTGGGGTGGCTTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IAMWTCPFLCSN*GPSGHLGWLVH Trigger: GTGGACAAGCCACCCCAGGTGCCCAGATGGTCCCCAATTAGAGCAGAGGAAAGGACAAGTCCACATAGCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 72 bp | ACTGCACTTTTAAATGTAGCATTCTCAGCGAGGCCGTaGGGCTGCAAGCAGGCTCAGAGTGCTGTGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TALLNVAFSARP*GCKQAQSAVGA Trigger: AGCACCCACAGCACTCTGAGCCTGCTTGCAGCCCAACGGCCTCGCTGAGAATGCTACATTTAAAAGTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298542.9 |
||
| CDS GCA 72 bp | GGAATGCTCCAGCTCAGTTGCAAATGTCACCTCCAATaGAGAATTCCTCCTCCTACTCTCCAGCACTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GMLQLSCKCHLQ*RIPPPTLQHWL Trigger: GAGCCAGTGCTGGAGAGTAGGAGGAGGAATTCTGCATTGGAGGTGACATTTGCAACTGAGCTGGAGCATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 72 bp | GGGATCCGCCTCTGGTTTGGAATGCTCCAGCTCAGTTaGAAATGTCACCTCCAATGCAGAATTCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GIRLWFGMLQLS*KCHLQCRIPPP Trigger: AGGAGGAGGAATTCTGCATTGGAGGTGACATTTGCAACTGAGCTGGAGCATTCCAAACCAGAGGCGGATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CCA 72 bp | GGAAAGAGGAACTGCTTTGGGACTGATGTAGCAATGTaGGATCCGCCTCTGGTTTGGAATGCTCCAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GKRNCFGTDVAM*DPPLVWNAPAQ Trigger: CTGAGCTGGAGCATTCCAAACCAGAGGCGGATCCCACATTGCTACATCAGTCCCAAAGCAGTTCCTCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 72 bp | TGGGATCCGCCTCTGGTTTGGAATGCTCCAGCTCAGTaGCAAATGTCACCTCCAATGCAGAATTCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WDPPLVWNAPAQ*QMSPPMQNSSS Trigger: GGAGGAGGAATTCTGCATTGGAGGTGACATTTGCAACTGAGCTGGAGCATTCCAAACCAGAGGCGGATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 90 bp | GTAGCAATGTGGGATCCGCCTCTGGTTTGGAATGCTCCAGCTCAGTaGCAAATGTCACCTCCAATGCAGAATTCCTCCTCCTACTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VAMWDPPLVWNAPAQ*QMSPPMQNSSSYSP Trigger: TGGAGAGTAGGAGGAGGAATTCTGCATTGGAGGTGACATTTGCAACTGAGCTGGAGCATTCCAAACCAGAGGCGGATCCCACATTGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 72 bp | AAAGCATGGTATTCCACACAAGTCTTCCAGAAAGCCTaGCAGGCATCTCGGCTGGCCATGGTGAACTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KAWYSTQVFQKA*QASRLAMVNSK Trigger: CTTGGAGTTCACCATGGCCAGCCGAGATGCCTGCAAGGCTTTCTGGAAGACTTGTGTGGAATACCATGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 72 bp | TTTGGGTTCGTCCACTATAGCGGAAACTGGAACCCTTaGTGCAGAGTAGGGTTTTGGGCTTTGATTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FGFVHYSGNWNP*CRVGFWALIWA Trigger: AGCCCAAATCAAAGCCCAAAACCCTACTCTGCAGCAAGGGTTCCAGTTTCCGCTATAGTGGACGAACCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 90 bp | CGGAAACTGGAACCCTTGCTGCAGAGTAGGGTTTTGGGCTTTGATTaGGGCTCTTCCGAAAGCCTGAAGAAAGCATGGTATTCCACACAA | + |
|
Preference number: 6 (lower is better) Translates to: RKLEPLLQSRVLGFD*GSSESLKKAWYSTQ Trigger: TTGTGTGGAATACCATGCTTTCTTCAGGCTTTCGGAAGAGCCCAAATCAAAGCCCAAAACCCTACTCTGCAGCAAGGGTTCCAGTTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 72 bp | GTTTTGACACATCAGAGAGGAGGTCTGGTGAGGACCTaGACTGTCGTTCATGGTACTGAGATGGGTAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VLTHQRGGLVRT*TVVHGTEMGNV Trigger: AACATTACCCATCTCAGTACCATGAACGACAGTGCAGGTCCTCACCAGACCTCCTCTCTGATGTGTCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CCA 72 bp | CAGGTCTTGCTGAAAGCTCTTCATTCTGATATTCCTTaGGCTTCTTTCAGCTGGCTTCATTGCAGTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QVLLKALHSDIP*ASFSWLHCSGL Trigger: GAGCCCACTGCAATGAAGCCAGCTGAAAGAAGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAAGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 72 bp | GCTCTTCAGCCTCCCTTTTCTCCCATATTCCAAAAGTaGCCTTTGGGTTCGTCCACTATAGCGGAAACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALQPPFSPIFQK*PLGSSTIAETG Trigger: TCCAGTTTCCGCTATAGTGGACGAACCCAAAGGCAACTTTTGGAATATGGGAGAAAAGGGAGGCTGAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 90 bp | CCTACCGCTAGTCCTGGCTATAGCTTCTTGGAGTACTTGCAGGTCTaGCTGAAAGCTCTTCATTCTGATATTCCTTGGGCTTCTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PTASPGYSFLEYLQV*LKALHSDIPWASFS Trigger: GCTGAAAGAAGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAAGACCTGCAAGTACTCCAAGAAGCTATAGCCAGGACTAGCGGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 90 bp | GATGTTGCTCCTACCGCTAGTCCTGGCTATAGCTTCTTGGAGTACTaGCAGGTCTTGCTGAAAGCTCTTCATTCTGATATTCCTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DVAPTASPGYSFLEY*QVLLKALHSDIPWA Trigger: AGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAAGACCTGCAAGTACTCCAAGAAGCTATAGCCAGGACTAGCGGTAGGAGCAACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 72 bp | AGTCCTGGCTATAGCTTCTTGGAGTACTTGCAGGTCTaGCTGAAAGCTCTTCATTCTGATATTCCTTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPGYSFLEYLQV*LKALHSDIPWA Trigger: AGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAAGACCTGCAAGTACTCCAAGAAGCTATAGCCAGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 72 bp | AAATTTGGGTCTTCCTCTTCTAGACCTACATTGATGTaGCTCCTACCGCTAGTCCTGGCTATAGCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KFGSSSSRPTLM*LLPLVLAIASW Trigger: CCAAGAAGCTATAGCCAGGACTAGCGGTAGGAGCAACATCAATGTAGGTCTAGAAGAGGAAGACCCAAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 90 bp | ACCTACATTGATGTTGCTCCTACCGCTAGTCCTGGCTATAGCTTCTaGGAGTACTTGCAGGTCTTGCTGAAAGCTCTTCATTCTGATATT | + |
|
Preference number: 6 (lower is better) Translates to: TYIDVAPTASPGYSF*EYLQVLLKALHSDI Trigger: AATATCAGAATGAAGAGCTTTCAGCAAGACCTGCAAGTACTCCAAGAAGCTATAGCCAGGACTAGCGGTAGGAGCAACATCAATGTAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CAA 90 bp | ACAAATGCATCTTCCAAATTTGGGTCTTCCTCTTCTAGACCTACATaGATGTTGCTCCTACCGCTAGTCCTGGCTATAGCTTCTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TNASSKFGSSSSRPT*MLLLPLVLAIASWS Trigger: ACTCCAAGAAGCTATAGCCAGGACTAGCGGTAGGAGCAACATCAATGTAGGTCTAGAAGAGGAAGACCCAAATTTGGAAGATGCATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS TCA 72 bp | CTGGCTATAGCTTCTTGGAGTACTTGCAGGTCTTGCTaGAAGCTCTTCATTCTGATATTCCTTGGGCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAIASWSTCRSC*KLFILIFLGLL Trigger: AAGAAGCCCAAGGAATATCAGAATGAAGAGCTTTCAGCAAGACCTGCAAGTACTCCAAGAAGCTATAGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS GCA 72 bp | AGATGTGAGATACCATCAACGCTGTACAGTTGTCACTaGATGGAAGCCTTCCTAGAGCCAAATCCTTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RCEIPSTLYSCH*MEAFLEPNPSL Trigger: TAAAGAAGGATTTGGCTCTAGGAAGGCTTCCATGCAGTGACAACTGTACAGCGTTGATGGTATCTCACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS CCA 72 bp | GCAGATGTCCAGGGTCCATTTTTACCTGCTTTGTTATaGGCTTCAAAAGCTCCAGCCAAACATTATTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ADVQGPFLPALL*ASKAPAKHYFQ Trigger: CTGGAAATAATGTTTGGCTGGAGCTTTTGAAGCCCATAACAAAGCAGGTAAAAATGGACCCTGGACATCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000464296.1 |
||
| CDS TCA 72 bp | TGTAAGTTAGCTGCTTTGCTGGACGCACTTTGCTTGTaGGGCCAGAATATATGCTCATGTGATTACCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: CKLAALLDALCL*GQNICSCDYQK Trigger: TTTCTGGTAATCACATGAGCATATATTCTGGCCTCACAAGCAAAGTGCGTCCAGCAAAGCAGCTAACTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||
| CDS TCA 72 bp | TCTGATTGGCTCTGGGACCTTTTAGGGGTTTGCTCTTaGATGTTACATACAAATGCATCTTCCAAATTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SDWLWDLLGVCS*MLHTNASSKFG Trigger: CCCAAATTTGGAAGATGCATTTGTATGTAACATTCAAGAGCAAACCCCTAAAAGGTCCCAGAGCCAATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000298542.9 ENST00000370879.5 ENST00000464296.1 |
||