RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000139926

Ensembl transcript IDs: ENST00000344768.10, ENST00000356218.8, ENST00000395718.6, ENST00000553556.2, ENST00000554167.5, ENST00000554495.5, ENST00000554745.1, ENST00000554778.1, ENST00000555197.1, ENST00000555703.4, ENST00000555936.5, ENST00000555952.5, ENST00000556137.5, ENST00000557001.5, ENST00000557103.5, ENST00000557183.1, ENST00000557405.1, ENST00000557522.1

Found 598 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTCCTTTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTaGCTACACATCCGCGACCCAGCACAGGAGGGACAGCACAGACAG +
Preference number: 1 (lower is better)
Translates to: FPFKVSGEPSVIRQC*LHIRDPAQEGQHRQ
Trigger: CTGTCTGTGCTGTCCCTCCTGTGCTGGGTCGCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAAAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR GCA 90 bp GGACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATaGACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAT +
Preference number: 1 (lower is better)
Translates to: GHGTERDEGVTGITA*TSGFLLIAYVLLSH
Trigger: ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATaGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATC +
Preference number: 1 (lower is better)
Translates to: HSISVHFGTASGRKQ*VYRAIISLLKEERI
Trigger: GATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR GCA 90 bp AGGAGTCACAGGCATCACAGCATGCACTTCTGGTTTTCTGCTTATTaGTTATGTGCTTCTGTCACATACGTATCTTTGGCTTGCTACAAC +
Preference number: 1 (lower is better)
Translates to: RSHRHHSMHFWFSAY*LCASVTYVSLACYN
Trigger: GTTGTAGCAAGCCAAAGATACGTATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGTGACTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR TCA 90 bp GAAGGCTTTGCAATCAGTAAAGCGCATTTCCTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTT +
Preference number: 1 (lower is better)
Translates to: EGFAISKAHFLLKDQ*TSGHLSCCTFSVVL
Trigger: AAGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTTTACTGATTGCAAAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR GCA 90 bp TCTGCTTATTGCTTATGTGCTTCTGTCACATACGTATCTTTGGCTTaGTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTG +
Preference number: 1 (lower is better)
Translates to: SAYCLCASVTYVSLA*YNLMILTTPSVFTL
Trigger: CAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACGTATGTGACAGAAGCACATAAGCAATAAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR TCA 90 bp AAGGCACATGAGAAAACAGTCATTCTGAACTCTACATATATCAACTaGCTGTCTGCAGGTATCATTCACTCAGTGACATATTCTCAATCT +
Preference number: 1 (lower is better)
Translates to: KAHEKTVILNSTYIN*LSAGIIHSVTYSQS
Trigger: AGATTGAGAATATGTCACTGAGTGAATGATACCTGCAGACAGTCAGTTGATATATGTAGAGTTCAGAATGACTGTTTTCTCATGTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCG +
Preference number: 2 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLKRISF*RISELP
Trigger: CGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTT...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGATGGCCAAAGGCACATaGGAAAACAGTCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLMAKGT*ENSHSE
Trigger: TTCAGAATGACTGTTTTCTCATGTGCCTTTGGCCAT...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CAA 90 bp AGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTaGTTGTATAATACTGACTCCCAGCCAGGGGTAACACTGCTTATG +
Preference number: 2 (lower is better)
Translates to: STGGTAQTGHVPAHH*LYNTDSQPGVTLLM
Trigger: CATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CAA 90 bp ACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTaGTATAATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTC +
Preference number: 2 (lower is better)
Translates to: TGGTAQTGHVPAHHL*YNTDSQPGVTLLMF
Trigger: GAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGACTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCT +
Preference number: 2 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGLLKDQ*TSGHLS
Trigger: AGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAG...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCG +
Preference number: 2 (lower is better)
Translates to: QPYDFDHSISVHFGTASGKRISF*RISELP
Trigger: CGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR CAA 90 bp GCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTaGGGACAGCCTCAGGGAGGAAGCAATGGGTATACAGAGCAATCA +
Preference number: 2 (lower is better)
Translates to: ACYNLMILTTPSVFT*GQPQGGSNGYTEQS
Trigger: TGATTGCTCTGTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR CAA 90 bp GCTTCTGTCACATACGTATCTTTGGCTTGCTACAACCTTATGATTTaGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ASVTYVSLACYNLMI*TTPSVFTLGQPQGG
Trigger: TCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACGTATGTGACAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCG +
Preference number: 2 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGKRISF*RISELP
Trigger: CGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTT...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGCTAAAAAGCATCAGATaGGCAAACACACCACACTCC +
Preference number: 2 (lower is better)
Translates to: QPYDFDHSISVHFGTASGLKSIR*ANTPHS
Trigger: GGAGTGTGGTGTGTTTGCTCATCTGATGCTTTTTAG...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGTCCTCTCCCAAACTATaGGCATTTTATGTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: QPYDFDHSISVHFGTASGSSPKL*AFYVGV
Trigger: CACTCCCACATAAAATGCTCATAGTTTGGGAGAGGA...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGGAGCTATGTTTAGGGTaGAGAAGATATGGCACAAGT +
Preference number: 2 (lower is better)
Translates to: EGQHRQGMFQLTICCIILELCLG*RRYGTS
Trigger: ACTTGTGCCATATCTTCTTCACCCTAAACATAGCTC...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGACTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCT +
Preference number: 2 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRLLKDQ*TSGHLS
Trigger: AGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAG...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCGATGTGGAACTCAAATaGATCCTGGAGCTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRDVELK*ILELSG
Trigger: TCCAGAAAGCTCCAGGATTCATTTGAGTTCCACATC...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGATGGCCAAAGGCACATaGGAAAACAGTCATTCTGAA +
Preference number: 2 (lower is better)
Translates to: EGQHRQGMFQLTICCIILMAKGT*ENSHSE
Trigger: TTCAGAATGACTGTTTTCTCATGTGCCTTTGGCCAT...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTCTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCT +
Preference number: 2 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWILLKDQ*TSGHLS
Trigger: AGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAG...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CAA 90 bp AAGGAGTCACAGGCATCACAGCATGCACTTCTGGTTTTCTGCTTATaGCTTATGTGCTTCTGTCACATACGTATCTTTGGCTTGCTACAA +
Preference number: 2 (lower is better)
Translates to: KESQASQHALLVFCL*LMCFCHIRIFGLLQ
Trigger: TTGTAGCAAGCCAAAGATACGTATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGTGACTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGACTAAAAAGCATCAGATaGGCAAACACACCACACTCC +
Preference number: 2 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRLKSIR*ANTPHS
Trigger: GGAGTGTGGTGTGTTTGCTCATCTGATGCTTTTTAG...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACCTAAAAAGCATCAGATaGGCAAACACACCACACTCC +
Preference number: 2 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHLKSIR*ANTPHS
Trigger: GGAGTGTGGTGTGTTTGCTCATCTGATGCTTTTTAG...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGTCCTCTCCCAAACTATaGGCATTTTATGTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGSSPKL*AFYVGV
Trigger: CACTCCCACATAAAATGCTCATAGTTTGGGAGAGGA...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGTCTACATATATCAACTaGCTGTCTGCAGGTATCATT +
Preference number: 2 (lower is better)
Translates to: EGQHRQGMFQLTICCIILSTYIN*LSAGII
Trigger: AATGATACCTGCAGACAGTCAGTTGATATATGTAGA...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAAATCCTGGAGCTTTCTaGAAGATCACAAAAGAGGAC +
Preference number: 2 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQNPGAF*KITKED
Trigger: GTCCTCTTTTGTGATCTTCCAGAAAGCTCCAGGATT...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTCTGTTACTTGGATGTaGAACTCAAATGAATCCTGG +
Preference number: 2 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRSVTWM*NSNESW
Trigger: CCAGGATTCATTTGAGTTCCACATCCAAGTAACAGA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTCTAAAAAGCATCAGATaGGCAAACACACCACACTCC +
Preference number: 2 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWILKSIR*ANTPHS
Trigger: GGAGTGTGGTGTGTTTGCTCATCTGATGCTTTTTAG...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCG +
Preference number: 2 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTKRISF*RISELP
Trigger: CGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTT...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CAA 90 bp TGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATACGTATCTTaGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTC +
Preference number: 2 (lower is better)
Translates to: WFSAYCLCASVTYVS*ACYNLMILTTPSVF
Trigger: GAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACGTATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATATGTAAAGAACTTATaGCTTTCGCATCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTYVKNL*LSHPLA
Trigger: TGCTAGAGGATGCGAAAGTCATAAGTTCTTTACATA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTTCCTCTCCCAAACTATaGGCATTTTATGTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFSSPKL*AFYVGV
Trigger: CACTCCCACATAAAATGCTCATAGTTTGGGAGAGGA...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR GCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACAGGCATCACAGCATaGACTTCTGGTTTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFTGITA*TSGFLL
Trigger: AAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTCACAGCATGCACTTCTaGTTTTCTGCTTATTGCTTA +
Preference number: 2 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIHSMHF*FSAYCL
Trigger: TAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTG...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTGAGCTATGTTTAGGGTaGAGAAGATATGGCACAAGT +
Preference number: 2 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTELCLG*RRYGTS
Trigger: ACTTGTGCCATATCTTCTTCACCCTAAACATAGCTC...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTTTCTCTCCTGAAGTGTaGACTACGTTTTTACTTTAC +
Preference number: 2 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIFSPEV*TTFLLY
Trigger: GTAAAGTAAAAACGTAGTTCACACTTCAGGAGAGAA...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTTATGAAGTTCTCTCCTaGAGTGTGAACTACGTTTTT +
Preference number: 2 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIYEVLS*SVNYVF
Trigger: AAAAACGTAGTTCACACTTCAGGAGAGAACTTCATA...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGAAAGGCAATTCTACTTaGGTCCCGCCACAAGAGAAT +
Preference number: 2 (lower is better)
Translates to: ETEILPYIPISATLVLLKKGNST*VPPQEN
Trigger: ATTCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTT...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGGAGCTATGTTTAGGGTaGAGAAGATATGGCACAAGT +
Preference number: 2 (lower is better)
Translates to: ETEILPYIPISATLVLLKELCLG*RRYGTS
Trigger: ACTTGTGCCATATCTTCTTCACCCTAAACATAGCTC...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR TCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCTATGTAAAGAACTTATaGCTTTCGCATCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: KQWVYRAIISLLKEERIFYVKNL*LSHPLA
Trigger: TGCTAGAGGATGCGAAAGTCATAAGTTCTTTACATA...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR CCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGTCTGTTACTTGGATGTaGAACTCAAATGAATCCTGG +
Preference number: 2 (lower is better)
Translates to: ETEILPYIPISATLVLLKSVTWM*NSNESW
Trigger: CCAGGATTCATTTGAGTTCCACATCCAAGTAACAGA...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR GCA 72 bp AAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTaGCTACACATCCGCGACCCAGCACAGGAGGGACAG +
Preference number: 3 (lower is better)
Translates to: KVSGEPSVIRQC*LHIRDPAQEGQ
Trigger: CTGTCCCTCCTGTGCTGGGTCGCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CAA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGGTCACATACGTATCTTaGGCTTGCTACAACCTTATG +
Preference number: 3 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLVTYVS*ACYNLM
Trigger: CATAAGGTTGTAGCAAGCCAAAGATACGTATGTGAC...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CAA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACTTCCGGGCACTTGTCTaGCTGTACATTTTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: HSISVHFGTASGRKQWVYFRALV*LYIFCS
Trigger: ACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAA...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR CAA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGTACAACCTTATGATTTaGACCACTCCATCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: DMALSGMKESQASQHALLYNLMI*TTPSVF
Trigger: GAACACTGATGGAGTGGTCAAAATCATAAGGTTGTA...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR TCA 72 bp CTGAAGGCTTTGCAATCAGTAAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCGGGCACTTGTCTTGCT +
Preference number: 3 (lower is better)
Translates to: LKALQSVKRISF*RISELPGTCLA
Trigger: AGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTTTACTGATTGCAAAGCCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR CAA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGATTCCGGGCACTTGTCTaGCTGTACATTTTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGFRALV*LYIFCS
Trigger: ACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAA...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCGTTCCAGCTCACCATTaGTTGTATAATACTGACTCC +
Preference number: 3 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRVPAHH*LYNTDS
Trigger: GGAGTCAGTATTATACAACAAATGGTGAGCTGGAAC...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR TCA 72 bp GCAATCAGTAAAGCGCATTTCCTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCTTGCTGTACATTTTCT +
Preference number: 3 (lower is better)
Translates to: AISKAHFLLKDQ*TSGHLSCCTFS
Trigger: AGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTTTACTGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR CAA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTCCGGGCACTTGTCTaGCTGTACATTTTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHFRALV*LYIFCS
Trigger: ACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAA...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR CAA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGAATATTCTGAAGGCTTaGCAATCAGTAAAGCGCATT +
Preference number: 3 (lower is better)
Translates to: EGQHRQGMFQLTICCIILNILKA*QSVKRI
Trigger: AATGCGCTTTACTGATTGCAAAGCCTTCAGAATATT...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CAA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAATATTCTGAAGGCTTaGCAATCAGTAAAGCGCATT +
Preference number: 3 (lower is better)
Translates to: QPYDFDHSISVHFGTASGNILKA*QSVKRI
Trigger: AATGCGCTTTACTGATTGCAAAGCCTTCAGAATATT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTACAACCTTATGATTTaGACCACTCCATCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRYNLMI*TTPSVF
Trigger: GAACACTGATGGAGTGGTCAAAATCATAAGGTTGTA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CAA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGTCACATACGTATCTTaGGCTTGCTACAACCTTATG +
Preference number: 3 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQVTYVS*ACYNLM
Trigger: CATAAGGTTGTAGCAAGCCAAAGATACGTATGTGAC...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCAGTGGTTTTCAACTTaGTTGCATATTAGCTCCATC +
Preference number: 3 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRQWFST*LHISSI
Trigger: GATGGAGCTAATATGCAACAAAGTTGAAAACCACTG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CCA 72 bp CATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTaGGTCCCGCCACAAGAGAATGATGTAATCGGTCTG +
Preference number: 3 (lower is better)
Translates to: HLENFKRKGNST*VPPQENDVIGL
Trigger: CAGACCGATTACATCATTCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR GCA 72 bp TGCTTATGTGCTTCTGTCACATACGTATCTTTGGCTTaGTACAACCTTATGATTTTGACCACTCCATCAGTG +
Preference number: 3 (lower is better)
Translates to: CLCASVTYVSLA*YNLMILTTPSV
Trigger: CACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACGTATGTGACAGAAGCACATAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR TCA 72 bp AATCATGGCCAAAGGCACATGAGAAAACAGTCATTCTaGACTCTACATATATCAACTGACTGTCTGCAGGTA +
Preference number: 3 (lower is better)
Translates to: NHGQRHMRKQSF*TLHISTDCLQV
Trigger: TACCTGCAGACAGTCAGTTGATATATGTAGAGTTCAGAATGACTGTTTTCTCATGTGCCTTTGGCCATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR-3UTR CAA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGGTTCCAGCTCACCATTaGTTGTATAATACTGACTCC +
Preference number: 3 (lower is better)
Translates to: ETEILPYIPISATLVLLKVPAHH*LYNTDS
Trigger: GGAGTCAGTATTATACAACAAATGGTGAGCTGGAAC...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR TCA 72 bp GAGAAAACAGTCATTCTGAACTCTACATATATCAACTaGCTGTCTGCAGGTATCATTCACTCAGTGACATAT +
Preference number: 3 (lower is better)
Translates to: EKTVILNSTYIN*LSAGIIHSVTY
Trigger: ATATGTCACTGAGTGAATGATACCTGCAGACAGTCAGTTGATATATGTAGAGTTCAGAATGACTGTTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLLPAGL*RHSPPL
Trigger: CAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAG...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGGCCACTCTCCACCCCTaGGGTGTGGGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLATLHP*GVGAAM
Trigger: CATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGC...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACTCTGGTCACCCCTCTaGCTCTTCCTACCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGILWSPL*LFLPAP
Trigger: CGGCGCCGGTAGGAAGAGTCAGAGGGGTGACCAGAG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGACCCCGTGTAGTATATaGGCTTCCGGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLTPCSI*ASGQKA
Trigger: TGCCTTCTGCCCGGAAGCTCATATACTACACGGGGT...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGTCATGCTGCCCGCACTaGTCCCGCTGGCCCGCGACC +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGSCCPH*SRWPAT
Trigger: GGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGA...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGGACCGTTTTTCCAGCTaGTCCATGTCGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLDRFSS*SMSRSR
Trigger: CCTGGACCTCGACATGGACCAGCTGGAAAAACGGTC...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCCGTGTCCCGGGGCTTaGTGTCTGCCTCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYPCPGA*CLPQCP
Trigger: CGGGCATTGAGGCAGACACCAAGCCCCGGGACACGG...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCGTGTCCCGGGGCTTaGTGTCTGCCTCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIPCPGA*CLPQCP
Trigger: CGGGCATTGAGGCAGACACCAAGCCCCGGGACACGG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGILPAGL*RHSPPL
Trigger: CAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGGAGTAGCTGTCTTCTaGCCCCGTGTCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYGVAVF*PRVPGL
Trigger: AAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATGGAGTAGCTGTCTTCTaGCCCCGTGTCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYGVAVF*PRVPGL
Trigger: AAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCC...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGGCCACTCTCCACCCCTaGGGTGTGGGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGATLHP*GVGAAM
Trigger: CATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGC...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTTTCATGCTGCCCGCACTaGTCCCGCTGGCCCGCGACC +
Preference number: 4 (lower is better)
Translates to: DTSSTLLLLPKVALQTPVSCCPH*SRWPAT
Trigger: GGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGA...AACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGCTTGTGTTTCATGCTaGCCGCACTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYACVSC*PHCSRW
Trigger: CCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCCGAGGTGTGGGAACTaGTGTGGCTGGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYPRCGN*CGWRWN
Trigger: ATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGGTTGCAGGAGGTGTCTaGAGCGCATGGGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILVAGGV*SAWGTP
Trigger: CGGGGTGCCCCATGCGCTCCAGACACCTCCTGCAAC...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGGGAACTGCTGTGGCTaGCGGTGGAATGACGGGACA +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYGNCCG*RWNDGT
Trigger: TGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGCCGTGTCCCGGGGCTTaGTGTCTGCCTCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGPCPGA*CLPQCP
Trigger: CGGGCATTGAGGCAGACACCAAGCCCCGGGACACGG...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTATGAAGGCTGCTGCTaGAGCCACCAGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYYEGCC*SHQEPG
Trigger: GCCTGGCTCCTGGTGGCTCCAGCAGCAGCCTTCATA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR TCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGTGGCTGGCGGTGGAATaGCGGGACAGGCGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILWLAVE*RDRRLC
Trigger: ACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCA...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGTGGCTGGCGGTGGAATaGCGGGACAGGCGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGWLAVE*RDRRLC
Trigger: ACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCA...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATGTGTGGGAGCTGCCATaGCTGGTCATTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYVWELP*LVIELQ
Trigger: CTGCAGCTCAATGACCAGTCATGGCAGCTCCCACAC...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTTCCCAAGATCAGCCTaGAGGGCAAAGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYFPRSA*RAKAAS
Trigger: GCTGGCAGCCTTTGCCCTGCAGGCTGATCTTGGGAA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGTCATGCTGCCCGCACTaGTCCCGCTGGCCCGCGACC +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGSCCPH*SRWPAT
Trigger: GGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGA...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGGACTCTTCATTCATCTaGTCCAGATCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLDSSFI*SRSRGS
Trigger: TGACCCCCGGGATCTGGAGCAGATGAATGAAGAGTC...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGCTGAGTCCAAAGAGGTaGCAGTCCTTTAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLLSPKR*QSFSLS
Trigger: GCTCAGGCTAAAGGACTGCCACCTCTTTGGACTCAG...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGATAGGAGGCCCAAATTaGTCGATACCCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLIGGPN*SIPLLA
Trigger: GGCCAGCAAGGGTATCGACCAATTTGGGCCTCCTAT...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTCCTCTCCCAAACTATaGGCATTTTATGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLSSPKL*AFYVGV
Trigger: CACTCCCACATAAAATGCTCATAGTTTGGGAGAGGA...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGGCTTGTGTTTCATGCTaGCCGCACTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGACVSC*PHCSRW
Trigger: CCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGC...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGCGCTTGTGTTTCATaGTGCCCGCACTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGGACVS*CPHCSR
Trigger: GCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCC...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGCCGAGGTGTGGGAACTaGTGTGGCTGGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILPRCGN*CGWRWN
Trigger: ATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGG...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGGACTGGTCATTGAGCTaGAGGTTTTCAGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLDWSLS*RFSACG
Trigger: ACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTC...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCTGAGGTGTGGGAGCTaGCATGACTGGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYLRCGS*HDWSLS
Trigger: GCTCAATGACCAGTCATGGCAGCTCCCACACCTCAG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGACTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGLPAGL*RHSPPL
Trigger: CAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAG...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAGACCGTTTTTCCAGCTaGTCCATGTCGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIDRFSS*SMSRSR
Trigger: CCTGGACCTCGACATGGACCAGCTGGAAAAACGGTC...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTGCTGTGGCTGGCGGTaGAATGACGGGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRCCGWR*NDGTGA
Trigger: AGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATATCAGCTTGCGGTGGATaGCACTGCTGGAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGISACGG*HCWSSC
Trigger: ACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGA...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGAGCTGTGTCGATCAGTaGAGGTCTTTGGTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLSCVDQ*RSLVSD
Trigger: GTCGGAAACCAAAGACCTCCACTGATCGACACAGCT...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGGCTGTTAGTGCAAACTaGTCTTTGTGCATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLAVSAN*SLCMFG
Trigger: TCCAAACATGCACAAAGATCAGTTTGCACTAACAGC...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp AACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACGCCACTCTCCACCCCTaGGGTGTGGGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: NKTPLPLYYYCLKLLSRHATLHP*GVGAAM
Trigger: CATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGC...GTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR TCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAAAGCATCTTGGATGTTaGTGCACTGCTGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIKHLGC*CTAGPS
Trigger: GCTTGGCCCAGCAGTGCATCAACATCCAAGATGCTT...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATTTCCCAAGATCAGCCTaGAGGGCAAAGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHFPRSA*RAKAAS
Trigger: GCTGGCAGCCTTTGCCCTGCAGGCTGATCTTGGGAA...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGCTTGTGTTTCATGCTaGCCGCACTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGACVSC*PHCSRW
Trigger: CCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGC...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTGGCGCTTGTGTTTCATaGTGCCCGCACTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSGACVS*CPHCSR
Trigger: GCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCC...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCCGAGGTGTGGGAACTaGTGTGGCTGGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRPRCGN*CGWRWN
Trigger: ATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTTCCGGGGCTTGGTGTCTaGCTCAATGCCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: DTSSTLLLLPKVALQTPVPGLGV*LNARGV
Trigger: CACACCTCGGGCATTGAGGCAGACACCAAGCCCCGG...AACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGACTCTTCATTCATCTaGTCCAGATCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYDSSFI*SRSRGS
Trigger: TGACCCCCGGGATCTGGAGCAGATGAATGAAGAGTC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCCATGGCTTTTTGAGTaGCAGAGTGGGGTGCTCAAG +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYPWLFE*QSGVLK
Trigger: CTTGAGCACCCCACTCTGGCACTCAAAAAGCCATGG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCTGAGTCCAAAGAGGTaGCAGTCCTTTAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYLSPKR*QSFSLS
Trigger: GCTCAGGCTAAAGGACTGCCACCTCTTTGGACTCAG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACAGTTGCAGGAGGTGTCTaGAGCGCATGGGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: QQDTSSTLLLLPKVALQTVAGGV*SAWGTP
Trigger: CGGGGTGCCCCATGCGCTCCAGACACCTCCTGCAAC...TGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp AGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGCCGCACTGCTCCCGCTaGCCCGCGACCGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RQQDTSSTLLLLPKVALQPHCSR*PATVFP
Trigger: TGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGG...CTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAATGCTGTGGCTGGCGGTaGAATGACGGGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQCCGWR*NDGTGA
Trigger: AGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCA...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGGAACTGCTGTGGCTaGCGGTGGAATGACGGGACA +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGGNCCG*RWNDGT
Trigger: TGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCC...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp AGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGCCGTGTCCCGGGGCTTaGTGTCTGCCTCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: RQQDTSSTLLLLPKVALQPCPGA*CLPQCP
Trigger: CGGGCATTGAGGCAGACACCAAGCCCCGGGACACGG...CTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATGGTGGATGGCACTGCTaGAGTAGCTGTCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHGGWHC*SSCLLA
Trigger: GGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACC...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGATGTTGATGCACTGCTaGGCCAAGCAACTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLMLMHC*AKQLLQ
Trigger: TTGCAACAGTTGCTTGGCCCAGCAGTGCATCAACAT...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTTCAGCTCCTGCCCCTaGAACCAGAATCGTCGAAAC +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYFSSCP*NQNRRN
Trigger: GTTTCGACGATTCTGGTTCCAGGGGCAGGAGCTGAA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR TCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCTCTGGTCACCCCTCTaGCTCTTCCTACCGGCGCCG +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHLWSPL*LFLPAP
Trigger: CGGCGCCGGTAGGAAGAGTCAGAGGGGTGACCAGAG...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR TCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGGTCGATACCCCAAGTaGCTTCGTATTGTCGTACCT +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYGRYPK*LRIVVP
Trigger: AGGTACGACAATACGAAGTCACTTGGGGTATCGACC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344768.10
CDS-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGTGGCTGGCGGTGGAATaGCGGGACAGGCGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGWLAVE*RDRRLC
Trigger: ACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCA...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGATGGCTGGCGGTGGAATaGCGGGACAGGCGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: DNKTPLPLYYYCLKLLSRWLAVE*RDRRLC
Trigger: ACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCA...TCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR TCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGCCATGACTGGTCATTaGGCTGCAGGTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYAMTGH*AAGFQL
Trigger: AAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAGCCATGACTGGTCATTaGGCTGCAGGTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIAMTGH*AAGFQL
Trigger: AAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGC...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACTGCACATGTCTGGGCTaGCTTCCAGAGACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYCTCLG*LPETLH
Trigger: ATGAAGAGTCTCTGGAAGTCAGCCCAGACATGTGCA...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGCTTAACAACTGTTTCTaGAGAGCTCGAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLLNNCF*RARGGR
Trigger: TCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAG...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYLLKDQ*TSGHLS
Trigger: AGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGAAAGACATTGTGCTATaGAGTTCTCTCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLKDIVL*SSLLKC
Trigger: ACACTTCAGGAGAGAACTTCATAGCACAATGTCTTT...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATAGAGGCGGTGGCTGTTaGTCAGAAGTTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHRGGGC*SEVAGG
Trigger: ACCTCCTGCAACTTCTGAGCAACAGCCACCGCCTCT...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACGGCGCTTGTGTTTCATaGTGCCCGCACTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHGACVS*CPHCSR
Trigger: GCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCC...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp CAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACAGGCGCTTGTGTTTCATaGTGCCCGCACTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: QQDTSSTLLLLPKVALQTGACVS*CPHCSR
Trigger: GCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCC...TGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGATGGTGTCTGCCTCAATaGCCGAGGTGTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGWCLPQ*PRCGNC
Trigger: GCAGTTCCCACACCTCGGGCATTGAGGCAGACACCA...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGCCGGGGCTTGGTGTCTaGCTCAATGCCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGPGLGV*LNARGV
Trigger: CACACCTCGGGCATTGAGGCAGACACCAAGCCCCGG...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATTGCGGTGGATGGCACTaGTGGAGTAGCTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHCGGWH*WSSCLL
Trigger: CAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCA...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp AACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: NKTPLPLYYYCLKLLSRHLPAGL*RHSPPL
Trigger: CAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAG...GTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTGGATGTTGATGCACTaGTGGGCCAAGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYWMLMH*WAKQLL
Trigger: CAACAGTTGCTTGGCCCAGCAGTGCATCAACATCCA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGACAGGCATCACAGCATaGACTTCTGGTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLTGITA*TSGFLL
Trigger: AAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGT...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATGGAAACAACCCAAGATaGGAAGTAAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYGNNPR*EVSLWL
Trigger: GAGCCAGAGGCTTACTTCCCATCTTGGGTTGTTTCC...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTCCAGCTTCCGGATATaGCGCAGGACAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRSSFRI*RRTGCR
Trigger: TCTGCAGCCTGTCCTGCGCCATATCCGGAAGCTGGA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTCCGCACTGCTCCCGCTaGCCCGCGACCGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIPHCSR*PATVFP
Trigger: TGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGG...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCTGCTGTGGCTGGCGGTaGAATGACGGGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: EDNKTPLPLYYYCLKLLSCCGWR*NDGTGA
Trigger: AGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCA...GGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCGGAGTAGCTGTCTTCTaGCCCCGTGTCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: EDNKTPLPLYYYCLKLLSGVAVF*PRVPGL
Trigger: AAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCC...GGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGTCAGCTTGCGGTGGATaGCACTGCTGGAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGSACGG*HCWSSC
Trigger: ACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGA...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGCACAGCATGCACTTCTaGTTTTCTGCTTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLHSMHF*FSAYCL
Trigger: TAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTG...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CAA 72 bp GGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTaGTTGTATAATACTGACTCCCAGCCAGGGGTAACA +
Preference number: 4 (lower is better)
Translates to: GTAQTGHVPAHH*LYNTDSQPGVT
Trigger: TGTTACCCCTGGCTGGGAGTCAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTTGTGTGGGAGCTGCCATaGCTGGTCATTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DTSSTLLLLPKVALQTPVVWELP*LVIELQ
Trigger: CTGCAGCTCAATGACCAGTCATGGCAGCTCCCACAC...AACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAAGCATCTTGGATGTTaGTGCACTGCTGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGKHLGC*CTAGPS
Trigger: GCTTGGCCCAGCAGTGCATCAACATCCAAGATGCTT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGGAGCTATGTTTAGGGTaGAGAAGATATGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLELCLG*RRYGTS
Trigger: ACTTGTGCCATATCTTCTTCACCCTAAACATAGCTC...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYKRISF*RISELP
Trigger: CGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTT...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTATGAAGTTCTCTCCTaGAGTGTGAACTACGTTTTT +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLYEVLS*SVNYVF
Trigger: AAAAACGTAGTTCACACTTCAGGAGAGAACTTCATA...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGGAAGTGTTCTTAGCATaGTTCATCTTTGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLEVFLA*FIFENP
Trigger: TGGGTTTTCAAAGATGAATCATGCTAAGAACACTTC...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACCTGCAGGGCAAAGGCTaGCAGCAGGAAGTAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHLQGKG*QQEVGL
Trigger: GAGGCCTACTTCCTGCTGGCAGCCTTTGCCCTGCAG...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAATTCCCAAGATCAGCCTaGAGGGCAAAGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQFPRSA*RAKAAS
Trigger: GCTGGCAGCCTTTGCCCTGCAGGCTGATCTTGGGAA...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGTCATGCTGCCCGCACTaGTCCCGCTGGCCCGCGACC +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKSCCPH*SRWPAT
Trigger: GGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGA...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAGCTTGTGTTTCATGCTaGCCGCACTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTACVSC*PHCSRW
Trigger: CCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGC...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACGCTTGTGTTTCATGCTaGCCGCACTGCTCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NKTPLPLYYYCLKLLSRHACVSC*PHCSRW
Trigger: CCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGC...GTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTGGCGCTTGTGTTTCATaGTGCCCGCACTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIGACVS*CPHCSR
Trigger: GCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCC...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp AGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGCCGAGGTGTGGGAACTaGTGTGGCTGGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RQQDTSSTLLLLPKVALQPRCGN*CGWRWN
Trigger: ATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGG...CTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTGGTGTCTGCCTCAATaGCCGAGGTGTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSWCLPQ*PRCGNC
Trigger: GCAGTTCCCACACCTCGGGCATTGAGGCAGACACCA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCCGGGGCTTGGTGTCTaGCTCAATGCCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHPGLGV*LNARGV
Trigger: CACACCTCGGGCATTGAGGCAGACACCAAGCCCCGG...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGACACCAGGAGCCAGGCTaGTGCTCTCAGAATGGGGCA +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRHQEPG*CSQNGA
Trigger: TGCCCCATTCTGAGAGCAGCAGCCTGGCTCCTGGTG...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAAGATATGAAGGCTGCTaGTGGAGCCACCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGRYEGC*WSHQEP
Trigger: TGGCTCCTGGTGGCTCCAGCAGCAGCCTTCATATCT...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR CCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATTGAGCACCAGGCGTTaGGCTCTCTGGTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTLSTRR*ALWSPL
Trigger: GAGGGGTGACCAGAGAGCCCAACGCCTGGTGCTCAA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGTGGGAAGTAAGCCTCTaGCTCGAAGTATTTTCCATA +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLWEVSL*LEVFSI
Trigger: TATGGAAAATACTTCGAGCCAGAGGCTTACTTCCCA...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGACCGTTTTTCCAGCTaGTCCATGTCGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGDRFSS*SMSRSR
Trigger: CCTGGACCTCGACATGGACCAGCTGGAAAAACGGTC...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATTGCTGTGGCTGGCGGTaGAATGACGGGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHCCGWR*NDGTGA
Trigger: AGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCA...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACAGGGAACTGCTGTGGCTaGCGGTGGAATGACGGGACA +
Preference number: 4 (lower is better)
Translates to: QQDTSSTLLLLPKVALQTGNCCG*RWNDGT
Trigger: TGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCC...TGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGGAGTAGCTGTCTTCTaGCCCCGTGTCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHGVAVF*PRVPGL
Trigger: AAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTTGGTGGATGGCACTGCTaGAGTAGCTGTCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: DTSSTLLLLPKVALQTPVGGWHC*SSCLLA
Trigger: GGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACC...AACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGGGGAGCTGCCATGACTaGTCATTGAGCTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGGSCHD*SLSCRF
Trigger: AAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCC...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAATGTTGATGCACTGCTaGGCCAAGCAACTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIMLMHC*AKQLLQ
Trigger: TTGCAACAGTTGCTTGGCCCAGCAGTGCATCAACAT...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAGGTCGATACCCTTGCTaGCCTCTTTCTTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIGRYPC*PLSSIL
Trigger: AAGAATGGAAGAAAGAGGCCAGCAAGGGTATCGACC...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGTTCCACCTTCCATCATaGGATGAAGTAACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLFHLPS*DEVTRR
Trigger: CCTTCTTGTTACTTCATCCCATGATGGAAGGTGGAA...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553556.2
3UTR CAA 72 bp ACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTaGTATAATACTGACTCCCAGCCAGGGGTAACACTG +
Preference number: 4 (lower is better)
Translates to: TAQTGHVPAHHL*YNTDSQPGVTL
Trigger: CAGTGTTACCCCTGGCTGGGAGTCAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTGCTCGGAGAAAGTCTTaGGCACCAGGCGTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIARRKS*APGVGL
Trigger: GAGCCCAACGCCTGGTGCTCAAGACTTTCTCCGAGC...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGGPGCH*CKIPGT
Trigger: AGTACCGGGAATCTTACATCAGTGACAACCTGGACC...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGTGTGGGAGCTGCCATaGCTGGTCATTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGVWELP*LVIELQ
Trigger: CTGCAGCTCAATGACCAGTCATGGCAGCTCCCACAC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGCCACTCTCCACCCCTaGGGTGTGGGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFATLHP*GVGAAM
Trigger: CATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCGCCACTCTCCACCCCTaGGGTGTGGGAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFATLHP*GVGAAM
Trigger: CATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGC...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACTTAACAACTGTTTCTaGAGAGCTCGAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGILNNCF*RARGGR
Trigger: TCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGATTTGCTGGTTCTTTTaGCTGGAAAAGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLICWFF*LEKHLG
Trigger: TCCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAAT...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTCCTCTCCCAAACTATaGGCATTTTATGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYSSPKL*AFYVGV
Trigger: CACTCCCACATAAAATGCTCATAGTTTGGGAGAGGA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATGATGTGGAACTCAAATaGATCCTGGAGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYDVELK*ILELSG
Trigger: TCCAGAAAGCTCCAGGATTCATTTGAGTTCCACATC...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGATGTGGAACTCAAATaGATCCTGGAGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYDVELK*ILELSG
Trigger: TCCAGAAAGCTCCAGGATTCATTTGAGTTCCACATC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTTAGAGGCGGTGGCTGTTaGTCAGAAGTTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: DTSSTLLLLPKVALQTPVRGGGC*SEVAGG
Trigger: ACCTCCTGCAACTTCTGAGCAACAGCCACCGCCTCT...AACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCCGAGGTGTGGGAACTaGTGTGGCTGGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHPRCGN*CGWRWN
Trigger: ATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGG...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGATGGTGTCTGCCTCAATaGCCGAGGTGTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRWCLPQ*PRCGNC
Trigger: GCAGTTCCCACACCTCGGGCATTGAGGCAGACACCA...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp AACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACTGGTGTCTGCCTCAATaGCCGAGGTGTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: NKTPLPLYYYCLKLLSRHWCLPQ*PRCGNC
Trigger: GCAGTTCCCACACCTCGGGCATTGAGGCAGACACCA...GTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTGCGGTGGATGGCACTaGTGGAGTAGCTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSCGGWH*WSSCLL
Trigger: CAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTCTGAGGTGTGGGAGCTaGCATGACTGGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSLRCGS*HDWSLS
Trigger: GCTCAATGACCAGTCATGGCAGCTCCCACACCTCAG...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATAGTGCCAGAGTGGGGTaGTCAAGGAAGAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHSARVG*SRKNVW
Trigger: CCAAACATTCTTCCTTGAGCACCCCACTCTGGCACT...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR GCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCAGGAGCCAGGCTGCTaGTCTCAGAATGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHQEPGC*SQNGAD
Trigger: GTCTGCCCCATTCTGAGAGCAGCAGCCTGGCTCCTG...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR GCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATATTGGTCGATACCCTTaGTGGCCTCTTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYIGRYP*WPLSSI
Trigger: AATGGAAGAAAGAGGCCAGCAAGGGTATCGACCAAT...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATGGAAACAACCCAAGATaGGAAGTAAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHGNNPR*EVSLWL
Trigger: GAGCCAGAGGCTTACTTCCCATCTTGGGTTGTTTCC...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGAGTCCTTCCCCCTCTTaGAAACAACCCAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILSPSPS*KQPKMG
Trigger: TCCCATCTTGGGTTGTTTCCAAGAGGGGGAAGGACT...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCGTTGCAGGAGGTGTCTaGAGCGCATGGGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFVAGGV*SAWGTP
Trigger: CGGGGTGCCCCATGCGCTCCAGACACCTCCTGCAAC...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCCAGCTTCCGGATATaGCGCAGGACAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTSSFRI*RRTGCR
Trigger: TCTGCAGCCTGTCCTGCGCCATATCCGGAAGCTGGA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCTCCAGCTTCCGGATATaGCGCAGGACAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EDNKTPLPLYYYCLKLLSSSFRI*RRTGCR
Trigger: TCTGCAGCCTGTCCTGCGCCATATCCGGAAGCTGGA...GGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTGACCGTTTTTCCAGCTaGTCCATGTCGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSDRFSS*SMSRSR
Trigger: CCTGGACCTCGACATGGACCAGCTGGAAAAACGGTC...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGACCGTTTTTCCAGCTaGTCCATGTCGAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QDTSSTLLLLPKVALQTPDRFSS*SMSRSR
Trigger: CCTGGACCTCGACATGGACCAGCTGGAAAAACGGTC...TGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTCCGCACTGCTCCCGCTaGCCCGCGACCGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFPHCSR*PATVFP
Trigger: TGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGG...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCCCGCACTGCTCCCGCTaGCCCGCGACCGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFPHCSR*PATVFP
Trigger: TGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGG...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGGTGGATGGCACTGCTaGAGTAGCTGTCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGGGWHC*SSCLLA
Trigger: GGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTCAGCTTGCGGTGGATaGCACTGCTGGAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSSACGG*HCWSSC
Trigger: ACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp AAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTCAGCTTGCGGTGGATaGCACTGCTGGAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: KTPLPLYYYCLKLLSRHQSACGG*HCWSSC
Trigger: ACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGA...CTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCTGAAGAGCTCGAGGTaGAAGACCCAATTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYLKSSR*KTQFLS
Trigger: TGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAG...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGCTGTGTCGATCAGTaGAGGTCTTTGGTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGSCVDQ*RSLVSD
Trigger: GTCGGAAACCAAAGACCTCCACTGATCGACACAGCT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAACTGGAAAAGCATCTTaGATGTTGATGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGITGKAS*MLMHCW
Trigger: CCAGCAGTGCATCAACATCCAAGATGCTTTTCCAGT...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACACTGGAAAAGCATCTTaGATGTTGATGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYTGKAS*MLMHCW
Trigger: CCAGCAGTGCATCAACATCCAAGATGCTTTTCCAGT...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGAACTCAAATGAATCCTaGAGCTTTCTGGAAGATCAC +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLNSNES*SFLEDH
Trigger: GTGATCTTCCAGAAAGCTCCAGGATTCATTTGAGTT...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGTCTGTTACTTGGATGTaGAACTCAAATGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLSVTWM*NSNESW
Trigger: CCAGGATTCATTTGAGTTCCACATCCAAGTAACAGA...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCTGCTGCTCTCAGAATaGGGCAGACTCCAGGCATTA +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRLLLSE*GRLQAL
Trigger: TAATGCCTGGAGTCTGCCCCATTCTGAGAGCAGCAG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR TCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTGGACCAGCAACTGGTaGCACAGAATCTTAACATTT +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYWTSNW*HRILTF
Trigger: AAATGTTAAGATTCTGTGTCACCAGTTGCTGGTCCA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAAGTGCTTATTCCTTTTaGAGTTCCCAAGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGISAYSF*SSQDQP
Trigger: AGGCTGATCTTGGGAACTTCAAAAGGAATAAGCACT...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGAACCCCGTGTAGTATATaGGCTTCCGGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: DNKTPLPLYYYCLKLLSRTPCSI*ASGQKA
Trigger: TGCCTTCTGCCCGGAAGCTCATATACTACACGGGGT...TCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR TCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRGPGCH*CKIPGT
Trigger: AGTACCGGGAATCTTACATCAGTGACAACCTGGACC...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGTGTGGGAGCTGCCATaGCTGGTCATTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHVWELP*LVIELQ
Trigger: CTGCAGCTCAATGACCAGTCATGGCAGCTCCCACAC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGCTTTCTGGTAAAGTCTaGTGTCATCGAGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGLSGKV*CHRGSS
Trigger: GCTTGAGCCTCGATGACATCAGACTTTACCAGAAAG...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGCTTTCTGGTAAAGTCTaGTGTCATCGAGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILLSGKV*CHRGSS
Trigger: GCTTGAGCCTCGATGACATCAGACTTTACCAGAAAG...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGTATGTAAAGAACTTATaGCTTTCGCATCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: DMALSGMKESQASQHALLYVKNL*LSHPLA
Trigger: TGCTAGAGGATGCGAAAGTCATAAGTTCTTTACATA...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAATGGCCAAAGGCACATaGGAAAACAGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIMAKGT*ENSHSE
Trigger: TTCAGAATGACTGTTTTCTCATGTGCCTTTGGCCAT...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGCGGTGGATGGCACTaGTGGAGTAGCTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTCGGWH*WSSCLL
Trigger: CAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGATGCGGTGGATGGCACTaGTGGAGTAGCTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DNKTPLPLYYYCLKLLSRCGGWH*WSSCLL
Trigger: CAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCA...TCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGACTGGTCATTGAGCTaGAGGTTTTCAGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGDWSLS*RFSACG
Trigger: ACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTC...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGCTGAGGTGTGGGAGCTaGCATGACTGGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGLRCGS*HDWSLS
Trigger: GCTCAATGACCAGTCATGGCAGCTCCCACACCTCAG...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGACTGAGGTGTGGGAGCTaGCATGACTGGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRLRCGS*HDWSLS
Trigger: GCTCAATGACCAGTCATGGCAGCTCCCACACCTCAG...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACTGAGGTGTGGGAGCTaGCATGACTGGTCATTGAGC +
Preference number: 4 (lower is better)
Translates to: QQDTSSTLLLLPKVALQTLRCGS*HDWSLS
Trigger: GCTCAATGACCAGTCATGGCAGCTCCCACACCTCAG...TGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGATGGATGTTGATGCACTaGTGGGCCAAGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGWMLMH*WAKQLL
Trigger: CAACAGTTGCTTGGCCCAGCAGTGCATCAACATCCA...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGTCTGTATTCCCCTCATaGTCAATCCAAGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILSVFPS*SIQESA
Trigger: CGCTGACTCTTGGATTGACCATGAGGGGAATACAGA...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGTCTGTATTCCCCTCATaGTCAATCCAAGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGSVFPS*SIQESA
Trigger: CGCTGACTCTTGGATTGACCATGAGGGGAATACAGA...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGCCGCACTGCTCCCGCTaGCCCGCGACCGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKPHCSR*PATVFP
Trigger: TGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGG...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCTGCTGTGGCTGGCGGTaGAATGACGGGACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFCCGWR*NDGTGA
Trigger: AGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCA...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGCCGTGTCCCGGGGCTTaGTGTCTGCCTCAATGCCCG +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKPCPGA*CLPQCP
Trigger: CGGGCATTGAGGCAGACACCAAGCCCCGGGACACGG...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGGAGTAGCTGTCTTCTaGCCCCGTGTCCCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFGVAVF*PRVPGL
Trigger: AAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGGTGGATGGCACTGCTaGAGTAGCTGTCTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHGGWHC*SSCLLA
Trigger: GGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTCAGCTTGCGGTGGATaGCACTGCTGGAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHSACGG*HCWSSC
Trigger: ACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGA...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTTGGGAGCTGCCATGACTaGTCATTGAGCTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DTSSTLLLLPKVALQTPVGSCHD*SLSCRF
Trigger: AAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCC...AACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACAGAGAATCAGTACTCTaGCCACGAAGCTTAACAACT +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYRESVL*PRSLTT
Trigger: AGTTGTTAAGCTTCGTGGCCAGAGTACTGATTCTCT...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCCGACATATAGTCTGTaGAAGAGAATCAGTACTCTG +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYPTYSL*KRISTL
Trigger: CAGAGTACTGATTCTCTTCCACAGACTATATGTCGG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAATCAGTGGAGGTCTTTaGTTTCCGACATATAGTCTG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIISGGL*FPTYSL
Trigger: CAGACTATATGTCGGAAACCAAAGACCTCCACTGAT...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATTTGCTGCTCTGTCACTaGTCAATCTGCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHLLLCH*SICHFP
Trigger: TGGAAAATGGCAGATTGATCAGTGACAGAGCAGCAA...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAATGCACATGTCTGGGCTaGCTTCCAGAGACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQCTCLG*LPETLH
Trigger: ATGAAGAGTCTCTGGAAGTCAGCCCAGACATGTGCA...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACATTTGCTGGTTCTTTTaGCTGGAAAAGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYICWFF*LEKHLG
Trigger: TCCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAAT...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAACTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQLLKDQ*TSGHLS
Trigger: AGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAG...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACATTCCCATGGCTTTTTaGGTGCCAGAGTGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHIPMAF*VPEWGA
Trigger: AGCACCCCACTCTGGCACTCAAAAAGCCATGGGAAT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR GCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATAGAGGCGGTGGCTGTTaGTCAGAAGTTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHRGGGC*SEVAGG
Trigger: ACCTCCTGCAACTTCTGAGCAACAGCCACCGCCTCT...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGCCGGGGCTTGGTGTCTaGCTCAATGCCCGAGGTGTG +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKPGLGV*LNARGV
Trigger: CACACCTCGGGCATTGAGGCAGACACCAAGCCCCGG...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTGACTGGTCATTGAGCTaGAGGTTTTCAGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSDWSLS*RFSACG
Trigger: ACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTC...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGACTGGTCATTGAGCTaGAGGTTTTCAGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQDWSLS*RFSACG
Trigger: ACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTC...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp AAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGGACTGGTCATTGAGCTaGAGGTTTTCAGCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: KTPLPLYYYCLKLLSRHQDWSLS*RFSACG
Trigger: ACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTC...CTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR GCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTG +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKLPAGL*RHSPPL
Trigger: CAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAG...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGACTCTTCATTCATCTaGTCCAGATCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGDSSFI*SRSRGS
Trigger: TGACCCCCGGGATCTGGAGCAGATGAATGAAGAGTC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTGGGCCAAGCAACTGTTaGAATAGAGGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSGPSNC*NRGLPH
Trigger: ATGAGGAAGGCCTCTATTGCAACAGTTGCTTGGCCC...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGGGCCAAGCAACTGTTaGAATAGAGGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQGPSNC*NRGLPH
Trigger: ATGAGGAAGGCCTCTATTGCAACAGTTGCTTGGCCC...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTGGATGTTGATGCACTaGTGGGCCAAGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSWMLMH*WAKQLL
Trigger: CAACAGTTGCTTGGCCCAGCAGTGCATCAACATCCA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATACAGGCATCACAGCATaGACTTCTGGTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHTGITA*TSGFLL
Trigger: AAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGT...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTAGTCCTTCCCCCTCTTaGAAACAACCCAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSSPSPS*KQPKMG
Trigger: TCCCATCTTGGGTTGTTTCCAAGAGGGGGAAGGACT...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGGGAACTGCTGTGGCTaGCGGTGGAATGACGGGACA +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFGNCCG*RWNDGT
Trigger: TGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACGGGAGCTGCCATGACTaGTCATTGAGCTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHGSCHD*SLSCRF
Trigger: AAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCC...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGCTGAAGAGCTCGAGGTaGAAGACCCAATTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGLKSSR*KTQFLS
Trigger: TGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAG...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATGCTGGTTCTTTTGACTaGAAAAGCATCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYAGSFD*KSILDV
Trigger: AACATCCAAGATGCTTTTCCAGTCAAAAGAACCAGC...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACACAGCATGCACTTCTaGTTTTCTGCTTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIHSMHF*FSAYCL
Trigger: TAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCACAGCATGCACTTCTaGTTTTCTGCTTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: HSISVHFGTASGRKQWVYHSMHF*FSAYCL
Trigger: TAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTG...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCACAGCATGCACTTCTaGTTTTCTGCTTATTGCTTA +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYHSMHF*FSAYCL
Trigger: TAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAACTCAAATGAATCCTaGAGCTTTCTGGAAGATCAC +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYNSNES*SFLEDH
Trigger: GTGATCTTCCAGAAAGCTCCAGGATTCATTTGAGTT...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATATCTGTTACTTGGATGTaGAACTCAAATGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGISVTWM*NSNESW
Trigger: CCAGGATTCATTTGAGTTCCACATCCAAGTAACAGA...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATAAAGGCAATTCTACTTaGGTCCCGCCACAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHKGNST*VPPQEN
Trigger: ATTCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTT...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTGPGCH*CKIPGT
Trigger: AGTACCGGGAATCTTACATCAGTGACAACCTGGACC...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHGPGCH*CKIPGT
Trigger: AGTACCGGGAATCTTACATCAGTGACAACCTGGACC...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACT +
Preference number: 4 (lower is better)
Translates to: EDNKTPLPLYYYCLKLLSGPGCH*CKIPGT
Trigger: AGTACCGGGAATCTTACATCAGTGACAACCTGGACC...GGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAGCCATGACTGGTCATTaGGCTGCAGGTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTAMTGH*AAGFQL
Trigger: AAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGC...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCGCCATGACTGGTCATTaGGCTGCAGGTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: EDNKTPLPLYYYCLKLLSAMTGH*AAGFQL
Trigger: AAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGC...GGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR TCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCGTGTGGGAGCTGCCATaGCTGGTCATTGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFVWELP*LVIELQ
Trigger: CTGCAGCTCAATGACCAGTCATGGCAGCTCCCACAC...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTGCACATGTCTGGGCTaGCTTCCAGAGACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHCTCLG*LPETLH
Trigger: ATGAAGAGTCTCTGGAAGTCAGCCCAGACATGTGCA...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGTGCACATGTCTGGGCTaGCTTCCAGAGACTCTTCAT +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGCTCLG*LPETLH
Trigger: ATGAAGAGTCTCTGGAAGTCAGCCCAGACATGTGCA...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGACTTAACAACTGTTTCTaGAGAGCTCGAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGLNNCF*RARGGR
Trigger: TCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAG...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATAAGCATCTTGGATGTTaGTGCACTGCTGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHKHLGC*CTAGPS
Trigger: GCTTGGCCCAGCAGTGCATCAACATCCAAGATGCTT...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACACTTCTGAAGGATCAGTaGACTTCCGGGCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTLLKDQ*TSGHLS
Trigger: AGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAG...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGCTCTTATGCAGAGACTaGGATACTTCCATACATTCC +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILLLCRD*DTSIHS
Trigger: GGAATGTATGGAAGTATCTCAGTCTCTGCATAAGAG...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGACTCTTCATTCATCTaGTCCAGATCCCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHDSSFI*SRSRGS
Trigger: TGACCCCCGGGATCTGGAGCAGATGAATGAAGAGTC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAACAGGCATCACAGCATaGACTTCTGGTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGTGITA*TSGFLL
Trigger: AAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGT...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR GCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAATTGGTCGATACCCTTaGTGGCCTCTTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGIGRYP*WPLSSI
Trigger: AATGGAAGAAAGAGGCCAGCAAGGGTATCGACCAAT...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGTGGGAAGTAAGCCTCTaGCTCGAAGTATTTTCCATA +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGWEVSL*LEVFSI
Trigger: TATGGAAAATACTTCGAGCCAGAGGCTTACTTCCCA...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGGAAACAACCCAAGATaGGAAGTAAGCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGGNNPR*EVSLWL
Trigger: GAGCCAGAGGCTTACTTCCCATCTTGGGTTGTTTCC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGAAGTCCTTCCCCCTCTTaGAAACAACCCAAGATGGGA +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRSPSPS*KQPKMG
Trigger: TCCCATCTTGGGTTGTTTCCAAGAGGGGGAAGGACT...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCTCCAGCTTCCGGATATaGCGCAGGACAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFSSFRI*RRTGCR
Trigger: TCTGCAGCCTGTCCTGCGCCATATCCGGAAGCTGGA...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGGGAGCTGCCATGACTaGTCATTGAGCTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHGSCHD*SLSCRF
Trigger: AAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCTGAAGAGCTCGAGGTaGAAGACCCAATTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRLKSSR*KTQFLS
Trigger: TGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGAGAATCAGTACTCTaGCCACGAAGCTTAACAACT +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGRESVL*PRSLTT
Trigger: AGTTGTTAAGCTTCGTGGCCAGAGTACTGATTCTCT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGATCAGTGGAGGTCTTTaGTTTCCGACATATAGTCTG +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILISGGL*FPTYSL
Trigger: CAGACTATATGTCGGAAACCAAAGACCTCCACTGAT...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACAGCTGTGTCGATCAGTaGAGGTCTTTGGTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHSCVDQ*RSLVSD
Trigger: GTCGGAAACCAAAGACCTCCACTGATCGACACAGCT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATATTACACAACAAACTCTaGAACTTCATCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PLHQCSLWDSLREEAMGILHNKL*NFIMSE
Trigger: CTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAA...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTTACACAACAAACTCTaGAACTTCATCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYLHNKL*NFIMSE
Trigger: CTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAATCCTGGAGCTTTCTaGAAGATCACAAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGNPGAF*KITKED
Trigger: GTCCTCTTTTGTGATCTTCCAGAAAGCTCCAGGATT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGACACCCCCAGGATCAGTaGTTTTCAACTTTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGHPQDQ*FSTLLH
Trigger: ATGCAACAAAGTTGAAAACCACTGATCCTGGGGGTG...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTATAGGAGGCCCAAATTaGTCGATACCCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIIGGPN*SIPLLA
Trigger: GGCCAGCAAGGGTATCGACCAATTTGGGCCTCCTAT...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTGGACCAGCAACTGGTaGCACAGAATCTTAACATTT +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRWTSNW*HRILTF
Trigger: AAATGTTAAGATTCTGTGTCACCAGTTGCTGGTCCA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTACCCCGTGTAGTATATaGGCTTCCGGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTTPCSI*ASGQKA
Trigger: TGCCTTCTGCCCGGAAGCTCATATACTACACGGGGT...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGACTTTCTGGTAAAGTCTaGTGTCATCGAGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRLSGKV*CHRGSS
Trigger: GCTTGAGCCTCGATGACATCAGACTTTACCAGAAAG...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACACTTTCTGGTAAAGTCTaGTGTCATCGAGGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTLSGKV*CHRGSS
Trigger: GCTTGAGCCTCGATGACATCAGACTTTACCAGAAAG...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGATTTGCTGGTTCTTTTaGCTGGAAAAGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGICWFF*LEKHLG
Trigger: TCCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAAT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHKRISF*RISELP
Trigger: CGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGAAAGACATTGTGCTATaGAGTTCTCTCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILKDIVL*SSLLKC
Trigger: ACACTTCAGGAGAGAACTTCATAGCACAATGTCTTT...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCTCTTATGCAGAGACTaGGATACTTCCATACATTCC +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRLLCRD*DTSIHS
Trigger: GGAATGTATGGAAGTATCTCAGTCTCTGCATAAGAG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTAGAGGCGGTGGCTGTTaGTCAGAAGTTGCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFRGGGC*SEVAGG
Trigger: ACCTCCTGCAACTTCTGAGCAACAGCCACCGCCTCT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTGGGCCAAGCAACTGTTaGAATAGAGGCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIGPSNC*NRGLPH
Trigger: ATGAGGAAGGCCTCTATTGCAACAGTTGCTTGGCCC...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAACAGGCATCACAGCATaGACTTCTGGTTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQTGITA*TSGFLL
Trigger: AAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTGT...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTGCTAAGGAAATGCACTaGATTATGATCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSAKEMH*IMIWAP
Trigger: AGGAGCCCAGATCATAATGCAGTGCATTTCCTTAGC...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTTACTGCACACGGAAGTaGATGATCATAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIYCTRK*MIIGGP
Trigger: TGGGCCTCCTATGATCATCCACTTCCGTGTGCAGTA...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACATGTTGATGCACTGCTaGGCCAAGCAACTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHMLMHC*AKQLLQ
Trigger: TTGCAACAGTTGCTTGGCCCAGCAGTGCATCAACAT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATGCTGGTTCTTTTGACTaGAAAAGCATCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHAGSFD*KSILDV
Trigger: AACATCCAAGATGCTTTTCCAGTCAAAAGAACCAGC...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAACTCAAATGAATCCTaGAGCTTTCTGGAAGATCAC +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGNSNES*SFLEDH
Trigger: GTGATCTTCCAGAAAGCTCCAGGATTCATTTGAGTT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGGTCGATACCCTTGCTaGCCTCTTTCTTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGGRYPC*PLSSIL
Trigger: AAGAATGGAAGAAAGAGGCCAGCAAGGGTATCGACC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
3UTR CAA 72 bp CAGGCATCACAGCATGCACTTCTGGTTTTCTGCTTATaGCTTATGTGCTTCTGTCACATACGTATCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QASQHALLVFCL*LMCFCHIRIFG
Trigger: GCCAAAGATACGTATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGATTGCTGCTCTGTCACTaGTCAATCTGCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRLLLCH*SICHFP
Trigger: TGGAAAATGGCAGATTGATCAGTGACAGAGCAGCAA...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTGCTGCTCTGTCACTaGTCAATCTGCCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHLLLCH*SICHFP
Trigger: TGGAAAATGGCAGATTGATCAGTGACAGAGCAGCAA...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGCTGTTAGTGCAAACTaGTCTTTGTGCATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQAVSAN*SLCMFG
Trigger: TCCAAACATGCACAAAGATCAGTTTGCACTAACAGC...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACCTTAACAACTGTTTCTaGAGAGCTCGAGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHLNNCF*RARGGR
Trigger: TCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAG...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCAAGCATCTTGGATGTTaGTGCACTGCTGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFKHLGC*CTAGPS
Trigger: GCTTGGCCCAGCAGTGCATCAACATCCAAGATGCTT...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTAAGCGCATTTCCTTCTaGAGGATCAGTGAACTTCCG +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIKRISF*RISELP
Trigger: CGGAAGTTCACTGATCCTTCAGAAGGAAATGCGCTT...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGCTAAAAAGCATCAGATaGGCAAACACACCACACTCC +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGLKSIR*ANTPHS
Trigger: GGAGTGTGGTGTGTTTGCTCATCTGATGCTTTTTAG...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGAGATGTGGAACTCAAATaGATCCTGGAGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRDVELK*ILELSG
Trigger: TCCAGAAAGCTCCAGGATTCATTTGAGTTCCACATC...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATAGCAAAACAATTTTGTaGCCACAGAACTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHSKTIL*PQNSME
Trigger: TTCCATAGAGTTCTGTGGTCACAAAATTGTTTTGCT...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAACTCTTATGCAGAGACTaGGATACTTCCATACATTCC +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQLLCRD*DTSIHS
Trigger: GGAATGTATGGAAGTATCTCAGTCTCTGCATAAGAG...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGTGCGGTGGATGGCACTaGTGGAGTAGCTGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKCGGWH*WSSCLL
Trigger: CAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCA...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCCTGAGTCCAAAGAGGTaGCAGTCCTTTAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFLSPKR*QSFSLS
Trigger: GCTCAGGCTAAAGGACTGCCACCTCTTTGGACTCAG...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGCTGAAGAGCTCGAGGTaGAAGACCCAATTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGLKSSR*KTQFLS
Trigger: TGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAG...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATATGTTGATGCACTGCTaGGCCAAGCAACTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHMLMHC*AKQLLQ
Trigger: TTGCAACAGTTGCTTGGCCCAGCAGTGCATCAACAT...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAACTGGAAAAGCATCTTaGATGTTGATGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTTGKAS*MLMHCW
Trigger: CCAGCAGTGCATCAACATCCAAGATGCTTTTCCAGT...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGTTACACAACAAACTCTaGAACTTCATCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: EGQHRQGMFQLTICCIILLHNKL*NFIMSE
Trigger: CTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAA...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTAATCCTGGAGCTTTCTaGAAGATCACAAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSNPGAF*KITKED
Trigger: GTCCTCTTTTGTGATCTTCCAGAAAGCTCCAGGATT...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGAAAGGCAATTCTACTTaGGTCCCGCCACAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGKGNST*VPPQEN
Trigger: ATTCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTT...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGACACCCCCAGGATCAGTaGTTTTCAACTTTGTTGCAT +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRHPQDQ*FSTLLH
Trigger: ATGCAACAAAGTTGAAAACCACTGATCCTGGGGGTG...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CAA 72 bp CCTTCTGAAGGATCAGTGAACTTCCGGGCACTTGTCTaGCTGTACATTTTCTGTAGTTCTTTTACTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PSEGSVNFRALV*LYIFCSSFTSV
Trigger: CACAGAAGTAAAAGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTCAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
3UTR CAA 72 bp ACATACGTATCTTTGGCTTGCTACAACCTTATGATTTaGACCACTCCATCAGTGTTCACTTTGGGACAGCCT +
Preference number: 4 (lower is better)
Translates to: TYVSLACYNLMI*TTPSVFTLGQP
Trigger: AGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACGTATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAGCTGTTAGTGCAAACTaGTCTTTGTGCATGTTTGGA +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTAVSAN*SLCMFG
Trigger: TCCAAACATGCACAAAGATCAGTTTGCACTAACAGC...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGCCATGACTGGTCATTaGGCTGCAGGTTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFAMTGH*AAGFQL
Trigger: AAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGAACTTCATCATGAGTaGGATCCAGAGAAAAGTATT +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGELHHE*DPEKSI
Trigger: AATACTTTTCTCTGGATCTCACTCATGATGAAGTTC...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACGAGCTATGTTTAGGGTaGAGAAGATATGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHELCLG*RRYGTS
Trigger: ACTTGTGCCATATCTTCTTCACCCTAAACATAGCTC...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTTCCTCTCCCAAACTATaGGCATTTTATGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWISSPKL*AFYVGV
Trigger: CACTCCCACATAAAATGCTCATAGTTTGGGAGAGGA...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTATGAAGTTCTCTCCTaGAGTGTGAACTACGTTTTT +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRYEVLS*SVNYVF
Trigger: AAAAACGTAGTTCACACTTCAGGAGAGAACTTCATA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACAAATGCACTGCATTATaGTCTGGGCTCCTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHKCTAL*SGLLRV
Trigger: TACTCTAAGGAGCCCAGATCATAATGCAGTGCATTT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGAAAATGCACTGCATTATaGTCTGGGCTCCTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRKCTAL*SGLLRV
Trigger: TACTCTAAGGAGCCCAGATCATAATGCAGTGCATTT...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTCGTATTGTCGTACCTTaGTGGCCTCTTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIRIVVP*WPLSSI
Trigger: AATGGAAGAAAGAGGCCAGCAAGGTACGACAATACG...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344768.10
CDS-3UTR GCA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGATAATAGTATCTTGCTaGTCTGTCACTGATCAATCT +
Preference number: 4 (lower is better)
Translates to: QPYDFDHSISVHFGTASGIIVSC*SVTDQS
Trigger: AGATTGATCAGTGACAGAGCAGCAAGATACTATTAT...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGCTAAGGAAATGCACTaGATTATGATCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHAKEMH*IMIWAP
Trigger: AGGAGCCCAGATCATAATGCAGTGCATTTCCTTAGC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTGCTAAGGAAATGCACTaGATTATGATCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIAKEMH*IMIWAP
Trigger: AGGAGCCCAGATCATAATGCAGTGCATTTCCTTAGC...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGAATTGTCGTACCTTGCTaGCCTCTTTCTTCCATTCTT +
Preference number: 4 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRIVVPC*PLSSIL
Trigger: AAGAATGGAAGAAAGAGGCCAGCAAGGTACGACAAT...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344768.10
CDS-3UTR CCA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCATCTTTGTGCATGTTTaGAATGTGCTTCAGGATGTA +
Preference number: 4 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRIFVHV*NVLQDV
Trigger: TACATCCTGAAGCACATTCCAAACATGCACAAAGAT...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAATCTTTGTGCATGTTTaGAATGTGCTTCAGGATGTA +
Preference number: 4 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGIFVHV*NVLQDV
Trigger: TACATCCTGAAGCACATTCCAAACATGCACAAAGAT...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAAGAGAATCAGTACTCTaGCCACGAAGCTTAACAACT +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTRESVL*PRSLTT
Trigger: AGTTGTTAAGCTTCGTGGCCAGAGTACTGATTCTCT...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGCCGACATATAGTCTGTaGAAGAGAATCAGTACTCTG +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGPTYSL*KRISTL
Trigger: CAGAGTACTGATTCTCTTCCACAGACTATATGTCGG...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCAGCTGTGTCGATCAGTaGAGGTCTTTGGTTTCCGAC +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFSCVDQ*RSLVSD
Trigger: GTCGGAAACCAAAGACCTCCACTGATCGACACAGCT...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGAATCCTGGAGCTTTCTaGAAGATCACAAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGNPGAF*KITKED
Trigger: GTCCTCTTTTGTGATCTTCCAGAAAGCTCCAGGATT...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAATCTGTTACTTGGATGTaGAACTCAAATGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQSVTWM*NSNESW
Trigger: CCAGGATTCATTTGAGTTCCACATCCAAGTAACAGA...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTATGTAAAGAACTTATaGCTTTCGCATCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSYVKNL*LSHPLA
Trigger: TGCTAGAGGATGCGAAAGTCATAAGTTCTTTACATA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAATCTACATATATCAACTaGCTGTCTGCAGGTATCATT +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQSTYIN*LSAGII
Trigger: AATGATACCTGCAGACAGTCAGTTGATATATGTAGA...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAATTCTCTCCTGAAGTGTaGACTACGTTTTTACTTTAC +
Preference number: 4 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQFSPEV*TTFLLY
Trigger: GTAAAGTAAAAACGTAGTTCACACTTCAGGAGAGAA...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGAAAGACATTGTGCTATaGAGTTCTCTCCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGKDIVL*SSLLKC
Trigger: ACACTTCAGGAGAGAACTTCATAGCACAATGTCTTT...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR GCA 90 bp GGAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCCACTTTATTACTACTaGCTAAAGTTGCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GRQQDTSSTLLLLPKVALPLYYY*LKLLSR
Trigger: TCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGG...GAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTATAGGAGGCCCAAATTaGTCGATACCCCAAGTGACT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFIGGPN*SIPQVT
Trigger: AGTCACTTGGGGTATCGACCAATTTGGGCCTCCTAT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344768.10
CDS-3UTR CCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGCTGGTTCTTTTGACTaGAAAAGCATCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGAGSFD*KSILDV
Trigger: AACATCCAAGATGCTTTTCCAGTCAAAAGAACCAGC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACAACTCAAATGAATCCTaGAGCTTTCTGGAAGATCAC +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHNSNES*SFLEDH
Trigger: GTGATCTTCCAGAAAGCTCCAGGATTCATTTGAGTT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATATTTGCTGGTTCTTTTaGCTGGAAAAGCATCTTGGA +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHICWFF*LEKHLG
Trigger: TCCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAAT...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGTATGTAAAGAACTTATaGCTTTCGCATCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGYVKNL*LSHPLA
Trigger: TGCTAGAGGATGCGAAAGTCATAAGTTCTTTACATA...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTCTAAAAAGCATCAGATaGGCAAACACACCACACTCC +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFLKSIR*ANTPHS
Trigger: GGAGTGTGGTGTGTTTGCTCATCTGATGCTTTTTAG...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCCTAAAAAGCATCAGATaGGCAAACACACCACACTCC +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFLKSIR*ANTPHS
Trigger: GGAGTGTGGTGTGTTTGCTCATCTGATGCTTTTTAG...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTGATGTGGAACTCAAATaGATCCTGGAGCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTDVELK*ILELSG
Trigger: TCCAGAAAGCTCCAGGATTCATTTGAGTTCCACATC...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCTACATATATCAACTaGCTGTCTGCAGGTATCATT +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTSTYIN*LSAGII
Trigger: AATGATACCTGCAGACAGTCAGTTGATATATGTAGA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAAGCAAAACAATTTTGTaGCCACAGAACTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTSKTIL*PQNSME
Trigger: TTCCATAGAGTTCTGTGGTCACAAAATTGTTTTGCT...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGAAGTGTTCTTAGCATaGTTCATCTTTGAAAACCCA +
Preference number: 4 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGEVFLA*FIFENP
Trigger: TGGGTTTTCAAAGATGAATCATGCTAAGAACACTTC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGTCTGTATTCCCCTCATaGTCAATCCAAGAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKSVFPS*SIQESA
Trigger: CGCTGACTCTTGGATTGACCATGAGGGGAATACAGA...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTACACAACAAACTCTaGAACTTCATCATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHLHNKL*NFIMSE
Trigger: CTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAA...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATTCTGTTACTTGGATGTaGAACTCAAATGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHSVTWM*NSNESW
Trigger: CCAGGATTCATTTGAGTTCCACATCCAAGTAACAGA...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTAGTGCTTATTCCTTTTaGAGTTCCCAAGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFSAYSF*SSQDQP
Trigger: AGGCTGATCTTGGGAACTTCAAAAGGAATAAGCACT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTAGTGCTTATTCCTTTTaGAGTTCCCAAGATCAGCCT +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTSAYSF*SSQDQP
Trigger: AGGCTGATCTTGGGAACTTCAAAAGGAATAAGCACT...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTGAACTTCATCATGAGTaGGATCCAGAGAAAAGTATT +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIELHHE*DPEKSI
Trigger: AATACTTTTCTCTGGATCTCACTCATGATGAAGTTC...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGAGCTATGTTTAGGGTaGAGAAGATATGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFELCLG*RRYGTS
Trigger: ACTTGTGCCATATCTTCTTCACCCTAAACATAGCTC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTATGGCCAAAGGCACATaGGAAAACAGTCATTCTGAA +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFMAKGT*ENSHSE
Trigger: TTCAGAATGACTGTTTTCTCATGTGCCTTTGGCCAT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTAAATGCACTGCATTATaGTCTGGGCTCCTTAGAGTA +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFKCTAL*SGLLRV
Trigger: TACTCTAAGGAGCCCAGATCATAATGCAGTGCATTT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTATAGCTGATGAAATTTaGCAAGTTTCCAACCAGAAG +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIIADEI*QVSNQK
Trigger: CTTCTGGTTGGAAACTTGTCAAATTTCATCAGCTAT...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR GCA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACATAATAGTATCTTGCTaGTCTGTCACTGATCAATCT +
Preference number: 4 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHIIVSC*SVTDQS
Trigger: AGATTGATCAGTGACAGAGCAGCAAGATACTATTAT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTTGGGAAGTAAGCCTCTaGCTCGAAGTATTTTCCATA +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTWEVSL*LEVFSI
Trigger: TATGGAAAATACTTCGAGCCAGAGGCTTACTTCCCA...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCAGAGAATCAGTACTCTaGCCACGAAGCTTAACAACT +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFRESVL*PRSLTT
Trigger: AGTTGTTAAGCTTCGTGGCCAGAGTACTGATTCTCT...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTCCGACATATAGTCTGTaGAAGAGAATCAGTACTCTG +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTPTYSL*KRISTL
Trigger: CAGAGTACTGATTCTCTTCCACAGACTATATGTCGG...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCATCAGTGGAGGTCTTTaGTTTCCGACATATAGTCTG +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFISGGL*FPTYSL
Trigger: CAGACTATATGTCGGAAACCAAAGACCTCCACTGAT...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTATCAGTGGAGGTCTTTaGTTTCCGACATATAGTCTG +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTISGGL*FPTYSL
Trigger: CAGACTATATGTCGGAAACCAAAGACCTCCACTGAT...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTAATCCTGGAGCTTTCTaGAAGATCACAAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFNPGAF*KITKED
Trigger: GTCCTCTTTTGTGATCTTCCAGAAAGCTCCAGGATT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
3UTR CAA 72 bp TTAACAAGACACCCCCAGGATCAGTGGTTTTCAACTTaGTTGCATATTAGCTCCATCTGGAGAACTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LTRHPQDQWFST*LHISSIWRTLK
Trigger: TTTTAAAGTTCTCCAGATGGAGCTAATATGCAACAAAGTTGAAAACCACTGATCCTGGGGGTGTCTTGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTAATTTTCAGTTGCTGTaGGTAAGCAGGCTGTTTACT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFNFQLL*VSRLFT
Trigger: AGTAAACAGCCTGCTTACTCACAGCAACTGAAAATT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR GCA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTATAATAGTATCTTGCTaGTCTGTCACTGATCAATCT +
Preference number: 4 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIIIVSC*SVTDQS
Trigger: AGATTGATCAGTGACAGAGCAGCAAGATACTATTAT...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGCCGACATATAGTCTGTaGAAGAGAATCAGTACTCTG +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKPTYSL*KRISTL
Trigger: CAGAGTACTGATTCTCTTCCACAGACTATATGTCGG...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGCTGGTTCTTTTGACTaGAAAAGCATCTTGGATGTT +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFAGSFD*KSILDV
Trigger: AACATCCAAGATGCTTTTCCAGTCAAAAGAACCAGC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTTCTACATATATCAACTaGCTGTCTGCAGGTATCATT +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTSTYIN*LSAGII
Trigger: AATGATACCTGCAGACAGTCAGTTGATATATGTAGA...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCTTCTCTCCTGAAGTGTaGACTACGTTTTTACTTTAC +
Preference number: 4 (lower is better)
Translates to: KQWVYRAIISLLKEERIFFSPEV*TTFLLY
Trigger: GTAAAGTAAAAACGTAGTTCACACTTCAGGAGAGAA...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTAGCAAAACAATTTTGTaGCCACAGAACTCTATGGAA +
Preference number: 4 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFSKTIL*PQNSME
Trigger: TTCCATAGAGTTCTGTGGTCACAAAATTGTTTTGCT...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CCA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTATCTTTGTGCATGTTTaGAATGTGCTTCAGGATGTA +
Preference number: 4 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTIFVHV*NVLQDV
Trigger: TACATCCTGAAGCACATTCCAAACATGCACAAAGAT...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGGAACTTCATCATGAGTaGGATCCAGAGAAAAGTATT +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKELHHE*DPEKSI
Trigger: AATACTTTTCTCTGGATCTCACTCATGATGAAGTTC...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR TCA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGTTCTCTCCTGAAGTGTaGACTACGTTTTTACTTTAC +
Preference number: 4 (lower is better)
Translates to: ETEILPYIPISATLVLLKFSPEV*TTFLLY
Trigger: GTAAAGTAAAAACGTAGTTCACACTTCAGGAGAGAA...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS GCA 90 bp GCTGGAGTAGCTGTCTTCTGGCCCCGTGTCCCGGGGCTTGGTGTCTaGCTCAATGCCCGAGGTGTGGGAACTGCTGTGGCTGGCGGTGGA +
Preference number: 5 (lower is better)
Translates to: AGVAVFWPRVPGLGV*LNARGVGTAVAGGG
Trigger: TCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS TCA 90 bp GCCTCAATGCCCGAGGTGTGGGAACTGCTGTGGCTGGCGGTGGAATaGCGGGACAGGCGCTTGTGTTTCATGCTGCCCGCACTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: ASMPEVWELLWLAVE*RDRRLCFMLPALLP
Trigger: CGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS TCA 90 bp GAGAAAGTCTTGAGCACCAGGCGTTGGGCTCTCTGGTCACCCCTCTaGCTCTTCCTACCGGCGCCGAGCCTGCCCCACTCCTCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: EKVLSTRRWALWSPL*LFLPAPSLPHSSQP
Trigger: GGGCTGAGAGGAGTGGGGCAGGCTCGGCGCCGGTAGGAAGAGTCAGAGGGGTGACCAGAGAGCCCAACGCCTGGTGCTCAAGACTTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395718.6
CDS GCA 90 bp TGTGGCTGGCGGTGGAATGACGGGACAGGCGCTTGTGTTTCATGCTaGCCGCACTGCTCCCGCTGGCCCGCGACCGTTTTTCCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: CGWRWNDGTGACVSC*PHCSRWPATVFPAG
Trigger: ACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 90 bp TGCTGTGGCTGGCGGTGGAATGACGGGACAGGCGCTTGTGTTTCATaGTGCCCGCACTGCTCCCGCTGGCCCGCGACCGTTTTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: CCGWRWNDGTGACVS*CPHCSRWPATVFPA
Trigger: AGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 90 bp GACGGGACAGGCGCTTGTGTTTCATGCTGCCCGCACTGCTCCCGCTaGCCCGCGACCGTTTTTCCAGCTGGTCCATGTCGAGGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: DGTGACVSCCPHCSR*PATVFPAGPCRGPG
Trigger: ACCTGGACCTCGACATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 90 bp TGGCACTGCTGGAGTAGCTGTCTTCTGGCCCCGTGTCCCGGGGCTTaGTGTCTGCCTCAATGCCCGAGGTGTGGGAACTGCTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: WHCWSSCLLAPCPGA*CLPQCPRCGNCCGW
Trigger: CCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCCAGCAGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 90 bp CGGTGGAATGACGGGACAGGCGCTTGTGTTTCATGCTGCCCGCACTaGTCCCGCTGGCCCGCGACCGTTTTTCCAGCTGGTCCATGTCGA +
Preference number: 5 (lower is better)
Translates to: RWNDGTGACVSCCPH*SRWPATVFPAGPCR
Trigger: TCGACATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 90 bp TGTCCCGGGGCTTGGTGTCTGCCTCAATGCCCGAGGTGTGGGAACTaGTGTGGCTGGCGGTGGAATGACGGGACAGGCGCTTGTGTTTCA +
Preference number: 5 (lower is better)
Translates to: CPGAWCLPQCPRCGN*CGWRWNDGTGACVS
Trigger: TGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGCCCCGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 90 bp CGGGTGCCAGGGCTGCTCTGGTTCTTGATTGTTCAGGCTGCCCTTTaGCTCAGGTCTGCGACCCTCTCTTCTCCACTGCCGACCACAGGC +
Preference number: 5 (lower is better)
Translates to: RVPGLLWFLIVQAAL*LRSATLSSPLPTTG
Trigger: GCCTGTGGTCGGCAGTGGAGAAGAGAGGGTCGCAGACCTGAGGCAAAGGGCAGCCTGAACAATCAAGAACCAGAGCAGCCCTGGCACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557103.5
CDS CCA 90 bp TGTCTGCCTCAATGCCCGAGGTGTGGGAACTGCTGTGGCTGGCGGTaGAATGACGGGACAGGCGCTTGTGTTTCATGCTGCCCGCACTGC +
Preference number: 5 (lower is better)
Translates to: CLPQCPRCGNCCGWR*NDGTGACVSCCPHC
Trigger: GCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 90 bp GCTTGGTGTCTGCCTCAATGCCCGAGGTGTGGGAACTGCTGTGGCTaGCGGTGGAATGACGGGACAGGCGCTTGTGTTTCATGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: AWCLPQCPRCGNCCG*RWNDGTGACVSCCP
Trigger: CGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 90 bp AGAAGAAGGCGAAGAAAGAGGCGGAGAGCGGTGCACTGCCTTCGCTaGGACTCGCGACTTCCAGAAACCCTCCCGAAACCCAGTCCCGCC +
Preference number: 5 (lower is better)
Translates to: RRRRRKRRRAVHCLR*DSRLPETLPKPSPA
Trigger: GGCGGGACTGGGTTTCGGGAGGGTTTCTGGAAGTCGCGAGTCCCAGCGAAGGCAGTGCACCGCTCTCCGCCTCTTTCTTCGCCTTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554778.1
CDS GCA 90 bp CCAGCCGGTCTTTGCCGCCACTCTCCACCCCTGAGGTGTGGGAGCTaGCATGACTGGTCATTGAGCTGCAGGTTTTCAGCTTGCGGTGGA +
Preference number: 5 (lower is better)
Translates to: PAGLCRHSPPLRCGS*HDWSLSCRFSACGG
Trigger: TCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 90 bp TGGGTGTCGGGTGCCAGGGCTGCTCTGGTTCTTGATTGTTCAGGCTaGCCTTTGCCTCAGGTCTGCGACCCTCTCTTCTCCACTGCCGAC +
Preference number: 5 (lower is better)
Translates to: WVSGARAALVLDCSG*PLPQVCDPLFSTAD
Trigger: GTCGGCAGTGGAGAAGAGAGGGTCGCAGACCTGAGGCAAAGGGCAGCCTGAACAATCAAGAACCAGAGCAGCCCTGGCACCCGACACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557103.5
CDS GCA 90 bp AAGGGAGCGAGAAGAAGGCGAAGAAAGAGGCGGAGAGCGGTGCACTaGCTTCGCTGGGACTCGCGACTTCCAGAAACCCTCCCGAAACCC +
Preference number: 5 (lower is better)
Translates to: KGARRRRRKRRRAVH*LRWDSRLPETLPKP
Trigger: GGGTTTCGGGAGGGTTTCTGGAAGTCGCGAGTCCCAGCGAAGGCAGTGCACCGCTCTCCGCCTCTTTCTTCGCCTTCTTCTCGCTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554778.1
CDS GCA 90 bp GAGCTAAGGGAGCGAGAAGAAGGCGAAGAAAGAGGCGGAGAGCGGTaGACTGCCTTCGCTGGGACTCGCGACTTCCAGAAACCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: ELREREEGEERGGER*TAFAGTRDFQKPSR
Trigger: TCGGGAGGGTTTCTGGAAGTCGCGAGTCCCAGCGAAGGCAGTGCACCGCTCTCCGCCTCTTTCTTCGCCTTCTTCTCGCTCCCTTAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554778.1
CDS TCA 90 bp CGGTCTTTGCCGCCACTCTCCACCCCTGAGGTGTGGGAGCTGCCATaGCTGGTCATTGAGCTGCAGGTTTTCAGCTTGCGGTGGATGGCA +
Preference number: 5 (lower is better)
Translates to: RSLPPLSTPEVWELP*LVIELQVFSLRWMA
Trigger: TGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 90 bp TATGGCGCAGGACAGGCTGCAGATTCATATAGAGGCGGTGGCTGTTaGTCAGAAGTTGCAGGAGGTGTCTGGAGCGCATGGGGCACCCCG +
Preference number: 5 (lower is better)
Translates to: YGAGQAADSYRGGGC*SEVAGGVWSAWGTP
Trigger: CGGGGTGCCCCATGCGCTCCAGACACCTCCTGCAACTTCTGAGCAACAGCCACCGCCTCTATATGAATCTGCAGCCTGTCCTGCGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000554167.5
ENST00000555197.1
ENST00000557183.1
ENST00000557522.1
CDS GCA 90 bp GCGACCCTCTCTTCTCCACTGCCGACCACAGGCTCAGGCTGGACTTaGTCTATTCTGGCTCCTGGCTACAACCATTTGCTGCCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: ATLSSPLPTTGSGWT*SILAPGYNHLLPVA
Trigger: GGCCACTGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGAGAGGGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS GCA 90 bp TTCAGGCTGCCCTTTGCCTCAGGTCTGCGACCCTCTCTTCTCCACTaGCGACCACAGGCTCAGGCTGGACTTGCTCTATTCTGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: FRLPFASGLRPSLLH*RPQAQAGLALFWLL
Trigger: CAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGAGAGGGTCGCAGACCTGAGGCAAAGGGCAGCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CCA 90 bp CTTTGCCGCCACTCTCCACCCCTGAGGTGTGGGAGCTGCCATGACTaGTCATTGAGCTGCAGGTTTTCAGCTTGCGGTGGATGGCACTGC +
Preference number: 5 (lower is better)
Translates to: LCRHSPPLRCGSCHD*SLSCRFSACGGWHC
Trigger: GCAGTGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 90 bp CAGTACTGTTACCATCGTCCTGTAAGTCCTCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTGAGGTGTGGGAGCTGCCATGACTGG +
Preference number: 5 (lower is better)
Translates to: QYCYHRPVSPLPAGL*RHSPPLRCGSCHDW
Trigger: CCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGGACGATGGTAACAGTACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS GCA 90 bp CAACCAACATCTCATCGTCCTGTAAGTCCTCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTGAGGTGTGGGAGCTGCCATGACTGG +
Preference number: 5 (lower is better)
Translates to: QPTSHRPVSPLPAGL*RHSPPLRCGSCHDW
Trigger: CCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGGACGATGAGATGTTGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555703.4
CDS CCA 90 bp ACTGCCGACCACAGGCTCAGGCTGGACTTGCTCTATTCTGGCTCCTaGCTACAACCATTTGCTGCCAGTGGCCTGGTGCTGATGGGGTCT +
Preference number: 5 (lower is better)
Translates to: TADHRLRLDLLYSGS*LQPFAASGLVLMGS
Trigger: AGACCCCATCAGCACCAGGCCACTGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS-3UTR CAA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGCTTGAGCACCAGGCGTaGGGCTCTCTGGTCACCCCT +
Preference number: 5 (lower is better)
Translates to: DMALSGMKESQASQHALLLEHQA*GSLVTP
Trigger: AGGGGTGACCAGAGAGCCCAACGCCTGGTGCTCAAG...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR CAA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATCCCGTGTCCCGGGGCTaGGTGTCTGCCTCAATGCCC +
Preference number: 5 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYPVSRG*VSASMP
Trigger: GGGCATTGAGGCAGACACCAAGCCCCGGGACACGGG...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCCGTGTCCCGGGGCTaGGTGTCTGCCTCAATGCCC +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIPVSRG*VSASMP
Trigger: GGGCATTGAGGCAGACACCAAGCCCCGGGACACGGG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS GCA 90 bp TCTCCACCCCTGAGGTGTGGGAGCTGCCATGACTGGTCATTGAGCTaGAGGTTTTCAGCTTGCGGTGGATGGCACTGCTGGAGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: SPPLRCGSCHDWSLS*RFSACGGWHCWSSC
Trigger: ACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 90 bp CTTCTCCACTGCCGACCACAGGCTCAGGCTGGACTTGCTCTATTCTaGCTCCTGGCTACAACCATTTGCTGCCAGTGGCCTGGTGCTGAT +
Preference number: 5 (lower is better)
Translates to: LLHCRPQAQAGLALF*LLATTICCQWPGAD
Trigger: ATCAGCACCAGGCCACTGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CCA 90 bp AGGTCTGCGACCCTCTCTTCTCCACTGCCGACCACAGGCTCAGGCTaGACTTGCTCTATTCTGGCTCCTGGCTACAACCATTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RSATLSSPLPTTGSG*TCSILAPGYNHLLP
Trigger: TGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGAGAGGGTCGCAGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS GCA 90 bp ACATCTCTATTTCATCGTCCTGTAAGTCCTCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTGAGGTGTGGGAGCTGCCATGACTGG +
Preference number: 5 (lower is better)
Translates to: TSLFHRPVSPLPAGL*RHSPPLRCGSCHDW
Trigger: CCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGGACGATGAAATAGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS-3UTR CAA 90 bp ACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATTCTTCCAGCCGGTCTTaGCCGCCACTCTCCACCCCT +
Preference number: 5 (lower is better)
Translates to: TTPSVFTLGQPQGGSNGYSSSRS*PPLSTP
Trigger: AGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGA...ATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGAAAGCATCTTGGATGTaGATGCACTGCTGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLKASWM*MHCWAK
Trigger: CTTGGCCCAGCAGTGCATCAACATCCAAGATGCTTT...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS GCA 90 bp CAGGCTGGACTTGCTCTATTCTGGCTCCTGGCTACAACCATTTGCTaGCAGTGGCCTGGTGCTGATGGGGTCTCCACCTACTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: QAGLALFWLLATTIC*QWPGADGVSTYFLK
Trigger: TTTGAGAAAGTAGGTGGAGACCCCATCAGCACCAGGCCACTGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS-3UTR CAA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGCATAGGAGGCCCAAATaGGTCGATACCCCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: DMALSGMKESQASQHALLHRRPK*VDTPSD
Trigger: GTCACTTGGGGTATCGACCAATTTGGGCCTCCTATG...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344768.10
CDS-3UTR CAA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTCCCGTGTCCCGGGGCTaGGTGTCTGCCTCAATGCCC +
Preference number: 5 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSPVSRG*VSASMP
Trigger: GGGCATTGAGGCAGACACCAAGCCCCGGGACACGGG...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp GACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACCAGTTCCCGTGTCCCGGGGCTaGGTGTCTGCCTCAATGCCC +
Preference number: 5 (lower is better)
Translates to: DTSSTLLLLPKVALQTPVPVSRG*VSASMP
Trigger: GGGCATTGAGGCAGACACCAAGCCCCGGGACACGGG...AACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CAA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGCCCGTGTCCCGGGGCTaGGTGTCTGCCTCAATGCCC +
Preference number: 5 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGPVSRG*VSASMP
Trigger: GGGCATTGAGGCAGACACCAAGCCCCGGGACACGGG...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTCTTCCAGCCGGTCTTaGCCGCCACTCTCCACCCCT +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRSSSRS*PPLSTP
Trigger: AGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCATCAGTGTTCACTTaGGGACAGCCTCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIPSVFT*GQPQGG
Trigger: TCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGTGATAAGGCAATGTaGCCTACACATCCGCGACCC +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIRDKAM*PTHPRP
Trigger: GGGTCGCGGATGTGTAGGCAACATTGCCTTATCACG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS CCA 90 bp CCGGTACTGCTTCTTCTCCTCTCTTTACCCTTCCACCTTCCATCATaGGATGAAGTAACAAGAAGGCCCTTGGTAGATGCTGGCCCCTCA +
Preference number: 5 (lower is better)
Translates to: PVLLLLLSLPFHLPS*DEVTRRPLVDAGPS
Trigger: TGAGGGGCCAGCATCTACCAAGGGCCTTCTTGTTACTTCATCCCATGATGGAAGGTGGAAGGGTAAAGAGAGGAGAAGAAGCAGTACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553556.2
ENST00000555703.4
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCAAGTGACTTCGTATaGTCGTACCTTGCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIPSDFV*SYLAGL
Trigger: GAGGCCAGCAAGGTACGACAATACGAAGTCACTTGG...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344768.10
CDS-3UTR CAA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTCTTCCAGCCGGTCTTaGCCGCCACTCTCCACCCCT +
Preference number: 5 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSSSSRS*PPLSTP
Trigger: AGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGGTTCCAGCTCACCATTaGTTGTATAATACTGACTCC +
Preference number: 5 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLVPAHH*LYNTDS
Trigger: GGAGTCAGTATTATACAACAAATGGTGAGCTGGAAC...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS TCA 90 bp GCGACCGTTTTTCCAGCTGGTCCATGTCGAGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACTGCTTCTTCTCTTCGTTTTCCTCCA +
Preference number: 5 (lower is better)
Translates to: ATVFPAGPCRGPGCH*CKIPGTASSLRFPP
Trigger: TGGAGGAAAACGAAGAGAAGAAGCAGTACCGGGAATCTTACATCAGTGACAACCTGGACCTCGACATGGACCAGCTGGAAAAACGGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000554167.5
ENST00000555197.1
ENST00000557522.1
CDS TCA 90 bp CCTGACACAGACCTGCAATGCGCAGGAAGTCTTTCTGGTAAAGTCTaGTGTCATCGAGGCTCAAGCTGTGTCGATCAGTGGAGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PDTDLQCAGSLSGKV*CHRGSSCVDQWRSL
Trigger: CAAAGACCTCCACTGATCGACACAGCTTGAGCCTCGATGACATCAGACTTTACCAGAAAGACTTCCTGCGCATTGCAGGTCTGTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS TCA 90 bp ACTGCTTCTTCTCCTCTCTTTACCCTTCCACCTTCCATCATGGGATaGAGTAACAAGAAGGCCCTTGGTAGATGCTGGCCCCTCAATCCC +
Preference number: 5 (lower is better)
Translates to: TASSPLFTLPPSIMG*SNKKALGRCWPLNP
Trigger: GGGATTGAGGGGCCAGCATCTACCAAGGGCCTTCTTGTTACTTCATCCCATGATGGAAGGTGGAAGGGTAAAGAGAGGAGAAGAAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553556.2
ENST00000555703.4
CDS TCA 90 bp GCGACCGTTTTTCCAGCTGGTCCATGTCGAGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACTGCTTCTTCTCCTCTCTTTACCCTT +
Preference number: 5 (lower is better)
Translates to: ATVFPAGPCRGPGCH*CKIPGTASSPLFTL
Trigger: AAGGGTAAAGAGAGGAGAAGAAGCAGTACCGGGAATCTTACATCAGTGACAACCTGGACCTCGACATGGACCAGCTGGAAAAACGGTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000553556.2
ENST00000555703.4
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCAGCTCGGAGAAAGTCTaGAGCACCAGGCGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRSSEKV*STRRWA
Trigger: AGCCCAACGCCTGGTGCTCAAGACTTTCTCCGAGCT...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATATGCCATGACTGGTCATaGAGCTGCAGGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGICHDWS*SCRFSA
Trigger: AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCA...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACTGCCATGACTGGTCATaGAGCTGCAGGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: HSISVHFGTASGRKQWVYCHDWS*SCRFSA
Trigger: AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCA...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGTCTTCCAGCCGGTCTTaGCCGCCACTCTCCACCCCT +
Preference number: 5 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGSSSRS*PPLSTP
Trigger: AGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGA...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCTCTTCCAGCCGGTCTTaGCCGCCACTCTCCACCCCT +
Preference number: 5 (lower is better)
Translates to: EDNKTPLPLYYYCLKLLSSSSRS*PPLSTP
Trigger: AGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGA...GGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CAA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACAAAGCATCTTGGATGTaGATGCACTGCTGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: HSISVHFGTASGRKQWVYKASWM*MHCWAK
Trigger: CTTGGCCCAGCAGTGCATCAACATCCAAGATGCTTT...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTATTTGCTGGTTCTTTaGACTGGAAAAGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLYLLVL*TGKASW
Trigger: CCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAATA...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGCCATCAGTGTTCACTTaGGGACAGCCTCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: EGQHRQGMFQLTICCIILPSVFT*GQPQGG
Trigger: TCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGG...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATCCATCAGTGTTCACTTaGGGACAGCCTCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHPSVFT*GQPQGG
Trigger: TCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGG...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CGACCCAGCACAGGAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTGGTTTTCAACTTTGTaGCATATTAGCTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: RPSTGGTAQTGHVPAHHLWFSTL*HISSIW
Trigger: CCAGATGGAGCTAATATGCAACAAAGTTGAAAACCA...CAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTCCTGTGCTGGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTACTCCTCTCAGCCCCTaGGCCCCGCCAGCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTTPLSP*APPARG
Trigger: CCCTCTGGCTGGCGGGGCCAAGGGGCTGAGAGGAGT...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395718.6
CDS-3UTR CAA 90 bp GACATGGCACTGAGCGGGATGAAGGAGTCACAGGCATCACAGCATGCACTTCTGGTCACATACGTATCTTaGGCTTGCTACAACCTTATG +
Preference number: 5 (lower is better)
Translates to: DMALSGMKESQASQHALLVTYVS*ACYNLM
Trigger: CATAAGGTTGTAGCAAGCCAAAGATACGTATGTGAC...CAGAAGTGCATGCTGTGATGCCTGTGACTCCTTCATCCCGCTCAGTGCCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCATTCCCATGGCTTTTaGAGTGCCAGAGTGGGGTGC +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRHSHGF*SARVGC
Trigger: GCACCCCACTCTGGCACTCAAAAAGCCATGGGAATG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356218.8
CDS-3UTR CAA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGAGCTCGGAGAAAGTCTaGAGCACCAGGCGTTGGGCT +
Preference number: 5 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGSSEKV*STRRWA
Trigger: AGCCCAACGCCTGGTGCTCAAGACTTTCTCCGAGCT...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR CAA 90 bp AATACTGACTCCCAGCCAGGGGTAACACTGCTTATGTTCCACTGTACCCTACATTGCCATGACTGGTCATaGAGCTGCAGGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: NTDSQPGVTLLMFHCTLHCHDWS*SCRFSA
Trigger: AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCA...ATGTAGGGTACAGTGGAACATAAGCAGTGTTACCCCTGGCTGGGAGTCAGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAACCATCAGTGTTCACTTaGGGACAGCCTCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQPSVFT*GQPQGG
Trigger: TCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGG...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACCCAGCTCACCATTTGTaGTATAATACTGACTCCCAG +
Preference number: 5 (lower is better)
Translates to: HSISVHFGTASGRKQWVYPAHHL*YNTDSQ
Trigger: CTGGGAGTCAGTATTATACAACAAATGGTGAGCTGG...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS TCA 90 bp AGGCTGTTTACTTCCAGCCACTTCTTTCCCATTCCCATGGCTTTTTaGGTGCCAGAGTGGGGTGCTCAAGGAAGAATGTTTGGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: RLFTSSHFFPIPMAF*VPEWGAQGRMFGEK
Trigger: TTTCTCTCCAAACATTCTTCCTTGAGCACCCCACTCTGGCACTCAAAAAGCCATGGGAATGGGAAAGAAGTGGCTGGAAGTAAACAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000556137.5
CDS-3UTR CAA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTCTTGAGCACCAGGCGTaGGGCTCTCTGGTCACCCCT +
Preference number: 5 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFLEHQA*GSLVTP
Trigger: AGGGGTGACCAGAGAGCCCAACGCCTGGTGCTCAAG...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAGATCTTTGTGCATGTTaGGAATGTGCTTCAGGATGT +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIDLCAC*ECASGC
Trigger: ACATCCTGAAGCACATTCCAAACATGCACAAAGATC...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATACGATCTTTGTGCATGTTaGGAATGTGCTTCAGGATGT +
Preference number: 5 (lower is better)
Translates to: HSISVHFGTASGRKQWVYDLCAC*ECASGC
Trigger: ACATCCTGAAGCACATTCCAAACATGCACAAAGATC...GTATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGATGCCATGACTGGTCATaGAGCTGCAGGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGCHDWS*SCRFSA
Trigger: AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCA...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATAGTCACATACGTATCTTaGGCTTGCTACAACCTTATG +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGIVTYVS*ACYNLM
Trigger: CATAAGGTTGTAGCAAGCCAAAGATACGTATGTGAC...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCTCGTATTGTCGTACCTaGCTGGCCTCTTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRSYCRT*LASFFH
Trigger: ATGGAAGAAAGAGGCCAGCAAGGTACGACAATACGA...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344768.10
CDS-3UTR CAA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGTTCCGGGCACTTGTCTaGCTGTACATTTTCTGTAGT +
Preference number: 5 (lower is better)
Translates to: EGQHRQGMFQLTICCIILFRALV*LYIFCS
Trigger: ACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAA...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CTTAGAGTACAAACCTCACCAGGCTTAAGCATCATCCATAAGAAATGGTGGATTCGTGATAAGGCAATGTaGCCTACACATCCGCGACCC +
Preference number: 5 (lower is better)
Translates to: LRVQTSPGLSIIHKKWWIRDKAM*PTHPRP
Trigger: GGGTCGCGGATGTGTAGGCAACATTGCCTTATCACG...AATCCACCATTTCTTATGGATGATGCTTAAGCCTGGTGAGGTTTGTACTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCAATTGGTCGATACCCTaGCTGGCCTCTTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRNWSIP*LASFFH
Trigger: ATGGAAGAAAGAGGCCAGCAAGGGTATCGACCAATT...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCATAGGAGGCCCAAATaGGTCGATACCCTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHHRRPK*VDTLAG
Trigger: GCCAGCAAGGGTATCGACCAATTTGGGCCTCCTATG...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS TCA 90 bp TGGAAGAGAATCAGTACTCTGGCCACGAAGCTTAACAACTGTTTCTaGAGAGCTCGAGGTGGAAGACCCAATTTCTTTCACAATCAACCC +
Preference number: 5 (lower is better)
Translates to: WKRISTLATKLNNCF*RARGGRPNFFHNQP
Trigger: GGGTTGATTGTGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAGCTTCGTGGCCAGAGTACTGATTCTCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS CCA 90 bp GCTGCCTGTACAGCTGCACACAGACGGACTTTACACAACAAACTCTaGAACTTCATCATGAGTGAGATCCAGAGAAAAGTATTTGCTGGT +
Preference number: 5 (lower is better)
Translates to: AACTAAHRRTLHNKL*NFIMSEIQRKVFAG
Trigger: ACCAGCAAATACTTTTCTCTGGATCTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAAAGTCCGTCTGTGTGCAGCTGTACAGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS-3UTR CAA 90 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCTGCCATGACTGGTCATaGAGCTGCAGGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: EDNKTPLPLYYYCLKLLSCHDWS*SCRFSA
Trigger: AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCA...GGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CAA 90 bp CGTATCTTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACAAAGCATCTTGGATGTaGATGCACTGCTGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: RIFGLLQPYDFDHSISVHKASWM*MHCWAK
Trigger: CTTGGCCCAGCAGTGCATCAACATCCAAGATGCTTT...GTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAAGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGGAAGCAATGGGTATATCTTATAGAAAGACATaGTGCTATGAAGTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: PLHQCSLWDSLREEAMGISYRKT*CYEVLS
Trigger: GGAGAGAACTTCATAGCACAATGTCTTTCTATAAGA...TATACCCATTGCTTCCTCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCCAGCTCACCATTTGTaGTATAATACTGACTCCCAG +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRPAHHL*YNTDSQ
Trigger: CTGGGAGTCAGTATTATACAACAAATGGTGAGCTGG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATAAAGCATCTTGGATGTaGATGCACTGCTGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHKASWM*MHCWAK
Trigger: CTTGGCCCAGCAGTGCATCAACATCCAAGATGCTTT...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp TTTGGCTTGCTACAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGGACTGGAAAAGCATCTaGGATGTTGATGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: FGLLQPYDFDHSISVHFGDWKSI*DVDALL
Trigger: CAGCAGTGCATCAACATCCAAGATGCTTTTCCAGTC...CCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTGTAGCAAGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CAACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGTATTTGCTGGTTCTTTaGACTGGAAAAGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: QPYDFDHSISVHFGTASGYLLVL*TGKASW
Trigger: CCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAATA...CCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAATTCCGGGCACTTGTCTaGCTGTACATTTTCTGTAGT +
Preference number: 5 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQFRALV*LYIFCS
Trigger: ACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAA...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAGTCACATACGTATCTTaGGCTTGCTACAACCTTATG +
Preference number: 5 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGVTYVS*ACYNLM
Trigger: CATAAGGTTGTAGCAAGCCAAAGATACGTATGTGAC...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp GAGGGACAGCACAGACAGGGCATGTTCCAGCTCACCATTTGTTGTATAATACTGCAGTGGTTTTCAACTTaGTTGCATATTAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: EGQHRQGMFQLTICCIILQWFST*LHISSI
Trigger: GATGGAGCTAATATGCAACAAAGTTGAAAACCACTG...CAGTATTATACAACAAATGGTGAGCTGGAACATGCCCTGTCTGTGCTGTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTCGTGATAAGGCAATGTaGCCTACACATCCGCGACCC +
Preference number: 5 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTRDKAM*PTHPRP
Trigger: GGGTCGCGGATGTGTAGGCAACATTGCCTTATCACG...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTCATAGGAGGCCCAAATaGGTCGATACCCTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTHRRPK*VDTLAG
Trigger: GCCAGCAAGGGTATCGACCAATTTGGGCCTCCTATG...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp AACAAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTTGCTCTCCAGACACTACTACTGCCTAAAGTaGCTCTCCAGACACCAGTTC +
Preference number: 5 (lower is better)
Translates to: NKTPLPLYYYCLKLLSRHYYCLK*LSRHQF
Trigger: GAACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTA...GTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS-3UTR CAA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGACTGGAAAAGCATCTaGGATGTTGATGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHDWKSI*DVDALL
Trigger: CAGCAGTGCATCAACATCCAAGATGCTTTTCCAGTC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATTCCGGGCACTTGTCTaGCTGTACATTTTCTGTAGT +
Preference number: 5 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTFRALV*LYIFCS
Trigger: ACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGTTCCAGCTCACCATTaGTTGTATAATACTGACTCC +
Preference number: 5 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQVPAHH*LYNTDS
Trigger: GGAGTCAGTATTATACAACAAATGGTGAGCTGGAAC...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATAATTGGTCGATACCCTaGCTGGCCTCTTTCTTCCAT +
Preference number: 5 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHNWSIP*LASFFH
Trigger: ATGGAAGAAAGAGGCCAGCAAGGGTATCGACCAATT...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000395718.6
CDS TCA 90 bp CTGCACACAGACGGACTTTACACAACAAACTCTGGAACTTCATCATaGGTGAGATCCAGAGAAAAGTATTTGCTGGTTCTTTTGACTGGA +
Preference number: 5 (lower is better)
Translates to: LHTDGLYTTNSGTSS*VRSREKYLLVLLTG
Trigger: TCCAGTCAAAAGAACCAGCAAATACTTTTCTCTGGATCTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAAAGTCCGTCTGTGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCCCAATTTTCCAACATTaGTCCAGGGGAAATCATAAA +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRPIFQH*SRGNHK
Trigger: TTTATGATTTCCCCTGGACAAATGTTGGAAAATTGG...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTATTTGCTGGTTCTTTaGACTGGAAAAGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSYLLVL*TGKASW
Trigger: CCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAATA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp AACCTTATGATTTTGACCACTCCATCAGTGTTCACTTTGGGACAGCCTCAGGGAAATATTCTGAAGGCTTaGCAATCAGTAAAGCGCATT +
Preference number: 5 (lower is better)
Translates to: NLMILTTPSVFTLGQPQGNILKA*QSVKRI
Trigger: AATGCGCTTTACTGATTGCAAAGCCTTCAGAATATT...TCCCTGAGGCTGTCCCAAAGTGAACACTGATGGAGTGGTCAAAATCATAAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp TTTAAAGTGTCAGGTGAACCTAGCGTGATAAGGCAATGTTGCCTACACATCCGCAATATTCTGAAGGCTTaGCAATCAGTAAAGCGCATT +
Preference number: 5 (lower is better)
Translates to: FKVSGEPSVIRQCCLHIRNILKA*QSVKRI
Trigger: AATGCGCTTTACTGATTGCAAAGCCTTCAGAATATT...GCGGATGTGTAGGCAACATTGCCTTATCACGCTAGGTTCACCTGACACTTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTTACAACCTTATGATTTaGACCACTCCATCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSYNLMI*TTPSVF
Trigger: GAACACTGATGGAGTGGTCAAAATCATAAGGTTGTA...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp GAAGGATCAGTGAACTTCCGGGCACTTGTCTTGCTGTACATTTTCTGTAGTTCTCAGTGGTTTTCAACTTaGTTGCATATTAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: EGSVNFRALVLLYIFCSSQWFST*LHISSI
Trigger: GATGGAGCTAATATGCAACAAAGTTGAAAACCACTG...AGAACTACAGAAAATGTACAGCAAGACAAGTGCCCGGAAGTTCACTGATCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATGATCTTTGTGCATGTTaGGAATGTGCTTCAGGATGT +
Preference number: 5 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHDLCAC*ECASGC
Trigger: ACATCCTGAAGCACATTCCAAACATGCACAAAGATC...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CTCCATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAACCAATTTTCCAACATTaGTCCAGGGGAAATCATAAA +
Preference number: 5 (lower is better)
Translates to: LHLENFKRKGNSTWVPPQPIFQH*SRGNHK
Trigger: TTTATGATTTCCCCTGGACAAATGTTGGAAAATTGG...TTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGATGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTGACTGGAAAAGCATCTaGGATGTTGATGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTDWKSI*DVDALL
Trigger: CAGCAGTGCATCAACATCCAAGATGCTTTTCCAGTC...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGACTGGAAAAGCATCTaGGATGTTGATGCACTGCTG +
Preference number: 5 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFDWKSI*DVDALL
Trigger: CAGCAGTGCATCAACATCCAAGATGCTTTTCCAGTC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATACAACCTTATGATTTaGACCACTCCATCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTYNLMI*TTPSVF
Trigger: GAACACTGATGGAGTGGTCAAAATCATAAGGTTGTA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp ATCTGGAGAACTTTAAAAGAAAAGGCAATTCTACTTGGGTCCCGCCACAAGAGATGGTTTTCAACTTTGTaGCATATTAGCTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: IWRTLKEKAILLGSRHKRWFSTL*HISSIW
Trigger: CCAGATGGAGCTAATATGCAACAAAGTTGAAAACCA...TCTCTTGTGGCGGGACCCAAGTAGAATTGCCTTTTCTTTTAAAGTTCTCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACACCAATTTTCCAACATTaGTCCAGGGGAAATCATAAA +
Preference number: 5 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTPIFQH*SRGNHK
Trigger: TTTATGATTTCCCCTGGACAAATGTTGGAAAATTGG...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACAAATATTCTGAAGGCTTaGCAATCAGTAAAGCGCATT +
Preference number: 5 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTNILKA*QSVKRI
Trigger: AATGCGCTTTACTGATTGCAAAGCCTTCAGAATATT...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATTACAACCTTATGATTTaGACCACTCCATCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHYNLMI*TTPSVF
Trigger: GAACACTGATGGAGTGGTCAAAATCATAAGGTTGTA...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp ATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCAGTGGTTTTCAACTTaGTTGCATATTAGCTCCATC +
Preference number: 5 (lower is better)
Translates to: ITACTSGFLLIAYVLLSHQWFST*LHISSI
Trigger: GATGGAGCTAATATGCAACAAAGTTGAAAACCACTG...ATGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp CATCACAGCATGCACTTCTGGTTTTCTGCTTATTGCTTATGTGCTTCTGTCACATCTTATAGAAAGACATaGTGCTATGAAGTTCTCTCC +
Preference number: 5 (lower is better)
Translates to: HHSMHFWFSAYCLCASVTSYRKT*CYEVLS
Trigger: GGAGAGAACTTCATAGCACAATGTCTTTCTATAAGA...TGTGACAGAAGCACATAAGCAATAAGCAGAAAACCAGAAGTGCATGCTGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS TCA 90 bp AGGGAGCCACAATCAGGCAATTTAATGCATCGTAAATATATTCCTTaGAAGGACAAGCTGACAGTAGAAAACAACTGCTGCTTTATCCAA +
Preference number: 5 (lower is better)
Translates to: REPQSGNLMHRKYIP*KDKLTVENNCCFIQ
Trigger: TTGGATAAAGCAGCAGTTGTTTTCTACTGTCAGCTTGTCCTTTCAAGGAATATATTTACGATGCATTAAATTGCCTGATTGTGGCTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555936.5
CDS-3UTR CAA 90 bp ACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTACTGTCACATACGTATCTTaGGCTTGCTACAACCTTATG +
Preference number: 5 (lower is better)
Translates to: TVLKMALSHTLRLLYTFTVTYVS*ACYNLM
Trigger: CATAAGGTTGTAGCAAGCCAAAGATACGTATGTGAC...AGTAAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp GAGACTGAGATACTTCCATACATTCCAATATCTGCAACTTTGGTTCTATTAAAGCCAGCTCACCATTTGTaGTATAATACTGACTCCCAG +
Preference number: 5 (lower is better)
Translates to: ETEILPYIPISATLVLLKPAHHL*YNTDSQ
Trigger: CTGGGAGTCAGTATTATACAACAAATGGTGAGCTGG...CTTTAATAGAACCAAAGTTGCAGATATTGGAATGTATGGAAGTATCTCAGTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp GTAACTGTCTTAAAAATGGCCCTTTCTCATACACTACGTCTTCTGTACACTTTTGTTCCAGCTCACCATTaGTTGTATAATACTGACTCC +
Preference number: 5 (lower is better)
Translates to: VTVLKMALSHTLRLLYTFVPAHH*LYNTDS
Trigger: GGAGTCAGTATTATACAACAAATGGTGAGCTGGAAC...AAAAGTGTACAGAAGACGTAGTGTATGAGAAAGGGCCATTTTTAAGACAGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCTATTTGCTGGTTCTTTaGACTGGAAAAGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: KQWVYRAIISLLKEERIFYLLVL*TGKASW
Trigger: CCAAGATGCTTTTCCAGTCAAAAGAACCAGCAAATA...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS-3UTR CAA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCTGGTTTTCAACTTTGTaGCATATTAGCTCCATCTGG +
Preference number: 5 (lower is better)
Translates to: KQWVYRAIISLLKEERIFWFSTL*HISSIW
Trigger: CCAGATGGAGCTAATATGCAACAAAGTTGAAAACCA...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
CDS-3UTR CAA 90 bp AAGCAATGGGTATACAGAGCAATCATCTCTCTGTTAAAAGAAGAGAGAATCTTCAATATTCTGAAGGCTTaGCAATCAGTAAAGCGCATT +
Preference number: 5 (lower is better)
Translates to: KQWVYRAIISLLKEERIFNILKA*QSVKRI
Trigger: AATGCGCTTTACTGATTGCAAAGCCTTCAGAATATT...GAAGATTCTCTCTTCTTTTAACAGAGAGATGATTGCTCTGTATACCCATTGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
CDS TCA 72 bp TTGAGCACCAGGCGTTGGGCTCTCTGGTCACCCCTCTaGCTCTTCCTACCGGCGCCGAGCCTGCCCCACTCC +
Preference number: 6 (lower is better)
Translates to: LSTRRWALWSPL*LFLPAPSLPHS
Trigger: GGAGTGGGGCAGGCTCGGCGCCGGTAGGAAGAGTCAGAGGGGTGACCAGAGAGCCCAACGCCTGGTGCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000395718.6
CDS GCA 72 bp TGGCGGTGGAATGACGGGACAGGCGCTTGTGTTTCATaGTGCCCGCACTGCTCCCGCTGGCCCGCGACCGTT +
Preference number: 6 (lower is better)
Translates to: WRWNDGTGACVS*CPHCSRWPATV
Trigger: AACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 72 bp GACGGGACAGGCGCTTGTGTTTCATGCTGCCCGCACTaGTCCCGCTGGCCCGCGACCGTTTTTCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: DGTGACVSCCPH*SRWPATVFPAG
Trigger: ACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 72 bp GCTGTCTTCTGGCCCCGTGTCCCGGGGCTTGGTGTCTaGCTCAATGCCCGAGGTGTGGGAACTGCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: AVFWPRVPGLGV*LNARGVGTAVA
Trigger: AGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGCCCCGGGACACGGGGCCAGAAGACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS TCA 72 bp CCCGAGGTGTGGGAACTGCTGTGGCTGGCGGTGGAATaGCGGGACAGGCGCTTGTGTTTCATGCTGCCCGCA +
Preference number: 6 (lower is better)
Translates to: PEVWELLWLAVE*RDRRLCFMLPA
Trigger: TGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 72 bp CGGTGGAATGACGGGACAGGCGCTTGTGTTTCATGCTaGCCGCACTGCTCCCGCTGGCCCGCGACCGTTTTT +
Preference number: 6 (lower is better)
Translates to: RWNDGTGACVSC*PHCSRWPATVF
Trigger: AAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 72 bp GCTTGGTGTCTGCCTCAATGCCCGAGGTGTGGGAACTaGTGTGGCTGGCGGTGGAATGACGGGACAGGCGCT +
Preference number: 6 (lower is better)
Translates to: AWCLPQCPRCGN*CGWRWNDGTGA
Trigger: AGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 72 bp GGCGCTTGTGTTTCATGCTGCCCGCACTGCTCCCGCTaGCCCGCGACCGTTTTTCCAGCTGGTCCATGTCGA +
Preference number: 6 (lower is better)
Translates to: GACVSCCPHCSR*PATVFPAGPCR
Trigger: TCGACATGGACCAGCTGGAAAAACGGTCGCGGGCCAGCGGGAGCAGTGCGGGCAGCATGAAACACAAGCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 72 bp TGGAGTAGCTGTCTTCTGGCCCCGTGTCCCGGGGCTTaGTGTCTGCCTCAATGCCCGAGGTGTGGGAACTGC +
Preference number: 6 (lower is better)
Translates to: WSSCLLAPCPGA*CLPQCPRCGNC
Trigger: GCAGTTCCCACACCTCGGGCATTGAGGCAGACACCAAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 72 bp CTTGCGGTGGATGGCACTGCTGGAGTAGCTGTCTTCTaGCCCCGTGTCCCGGGGCTTGGTGTCTGCCTCAAT +
Preference number: 6 (lower is better)
Translates to: LAVDGTAGVAVF*PRVPGLGVCLN
Trigger: ATTGAGGCAGACACCAAGCCCCGGGACACGGGGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CAA 90 bp TCGGGTGCCAGGGCTGCTCTGGTTCTTGATTGTTCAGGCTGCCCTTaGCCTCAGGTCTGCGACCCTCTCTTCTCCACTGCCGACCACAGG +
Preference number: 6 (lower is better)
Translates to: SGARAALVLDCSGCP*PQVCDPLFSTADHR
Trigger: CCTGTGGTCGGCAGTGGAGAAGAGAGGGTCGCAGACCTGAGGCAAAGGGCAGCCTGAACAATCAAGAACCAGAGCAGCCCTGGCACCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557103.5
CDS CAA 90 bp GTAGCCCACTCTCCTGGGTGTCGGGTGCCAGGGCTGCTCTGGTTCTaGATTGTTCAGGCTGCCCTTTGCCTCAGGTCTGCGACCCTCTCT +
Preference number: 6 (lower is better)
Translates to: VAHSPGCRVPGLLWF*IVQAALCLRSATLS
Trigger: AGAGAGGGTCGCAGACCTGAGGCAAAGGGCAGCCTGAACAATCAAGAACCAGAGCAGCCCTGGCACCCGACACCCAGGAGAGTGGGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557103.5
CDS GCA 72 bp TTGAGCTGCAGGTTTTCAGCTTGCGGTGGATGGCACTaGTGGAGTAGCTGTCTTCTGGCCCCGTGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: LSCRFSACGGWH*WSSCLLAPCPG
Trigger: CCCGGGACACGGGGCCAGAAGACAGCTACTCCAGCAGTGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 72 bp TACCATCGTCCTGTAAGTCCTCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTGAGGTGTGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: YHRPVSPLPAGL*RHSPPLRCGSC
Trigger: GCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGGACGATGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS GCA 72 bp TCTCATCGTCCTGTAAGTCCTCTTCCAGCCGGTCTTTaGCGCCACTCTCCACCCCTGAGGTGTGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SHRPVSPLPAGL*RHSPPLRCGSC
Trigger: GCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGGACGATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555703.4
CDS CCA 72 bp CAATGCCCGAGGTGTGGGAACTGCTGTGGCTGGCGGTaGAATGACGGGACAGGCGCTTGTGTTTCATGCTGC +
Preference number: 6 (lower is better)
Translates to: QCPRCGNCCGWR*NDGTGACVSCC
Trigger: GCAGCATGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 72 bp CTGCCTCAATGCCCGAGGTGTGGGAACTGCTGTGGCTaGCGGTGGAATGACGGGACAGGCGCTTGTGTTTCA +
Preference number: 6 (lower is better)
Translates to: LPQCPRCGNCCG*RWNDGTGACVS
Trigger: TGAAACACAAGCGCCTGTCCCGTCATTCCACCGCCAGCCACAGCAGTTCCCACACCTCGGGCATTGAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CAA 90 bp CGCCACTCTCCACCCCTGAGGTGTGGGAGCTGCCATGACTGGTCATaGAGCTGCAGGTTTTCAGCTTGCGGTGGATGGCACTGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: RHSPPLRCGSCHDWS*SCRFSACGGWHCWS
Trigger: ACTCCAGCAGTGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 72 bp CCCTTTGCCTCAGGTCTGCGACCCTCTCTTCTCCACTaGCGACCACAGGCTCAGGCTGGACTTGCTCTATTC +
Preference number: 6 (lower is better)
Translates to: PFASGLRPSLLH*RPQAQAGLALF
Trigger: GAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGAGAGGGTCGCAGACCTGAGGCAAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS GCA 72 bp GGTGCCAGGGCTGCTCTGGTTCTTGATTGTTCAGGCTaGCCTTTGCCTCAGGTCTGCGACCCTCTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GARAALVLDCSG*PLPQVCDPLFS
Trigger: GGAGAAGAGAGGGTCGCAGACCTGAGGCAAAGGGCAGCCTGAACAATCAAGAACCAGAGCAGCCCTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557103.5
CDS GCA 72 bp AGAAGAAGGCGAAGAAAGAGGCGGAGAGCGGTGCACTaGCTTCGCTGGGACTCGCGACTTCCAGAAACCCTC +
Preference number: 6 (lower is better)
Translates to: RRRRRKRRRAVH*LRWDSRLPETL
Trigger: GAGGGTTTCTGGAAGTCGCGAGTCCCAGCGAAGGCAGTGCACCGCTCTCCGCCTCTTTCTTCGCCTTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554778.1
CDS CAA 72 bp CCACCCCTGAGGTGTGGGAGCTGCCATGACTGGTCATaGAGCTGCAGGTTTTCAGCTTGCGGTGGATGGCAC +
Preference number: 6 (lower is better)
Translates to: PPLRCGSCHDWS*SCRFSACGGWH
Trigger: GTGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CAA 72 bp TTACCATCGTCCTGTAAGTCCTCTTCCAGCCGGTCTTaGCCGCCACTCTCCACCCCTGAGGTGTGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LPSSCKSSSSRS*PPLSTPEVWEL
Trigger: CAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGGACGATGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS CAA 72 bp ATCTCATCGTCCTGTAAGTCCTCTTCCAGCCGGTCTTaGCCGCCACTCTCCACCCCTGAGGTGTGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: ISSSCKSSSSRS*PPLSTPEVWEL
Trigger: CAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAGACCGGCTGGAAGAGGACTTACAGGACGATGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555703.4
CDS CAA 90 bp TGCGACCCTCTCTTCTCCACTGCCGACCACAGGCTCAGGCTGGACTaGCTCTATTCTGGCTCCTGGCTACAACCATTTGCTGCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: CDPLFSTADHRLRLD*LYSGSWLQPFAASG
Trigger: GCCACTGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGAGAGGGTCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS GCA 72 bp CTGAGGTGTGGGAGCTGCCATGACTGGTCATTGAGCTaGAGGTTTTCAGCTTGCGGTGGATGGCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: LRCGSCHDWSLS*RFSACGGWHCW
Trigger: CCAGCAGTGCCATCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS GCA 72 bp CTTTGCCGCCACTCTCCACCCCTGAGGTGTGGGAGCTaGCATGACTGGTCATTGAGCTGCAGGTTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: LCRHSPPLRCGS*HDWSLSCRFSA
Trigger: AGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTGGCGGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 72 bp CACTCTCCACCCCTGAGGTGTGGGAGCTGCCATGACTaGTCATTGAGCTGCAGGTTTTCAGCTTGCGGTGGA +
Preference number: 6 (lower is better)
Translates to: HSPPLRCGSCHD*SLSCRFSACGG
Trigger: TCCACCGCAAGCTGAAAACCTGCAGCTCAATGACCAGTCATGGCAGCTCCCACACCTCAGGGGTGGAGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000555197.1
ENST00000555703.4
ENST00000557522.1
CDS CCA 72 bp TCTGGTCTCAGATCCTCTTCCTGTAGCCCACTCTCCTaGGTGTCGGGTGCCAGGGCTGCTCTGGTTCTTGAT +
Preference number: 6 (lower is better)
Translates to: SGLRSSSCSPLS*VSGARAALVLD
Trigger: ATCAAGAACCAGAGCAGCCCTGGCACCCGACACCCAGGAGAGTGGGCTACAGGAAGAGGATCTGAGACCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557103.5
CDS GCA 72 bp GGACAGGCTGCAGATTCATATAGAGGCGGTGGCTGTTaGTCAGAAGTTGCAGGAGGTGTCTGGAGCGCATGG +
Preference number: 6 (lower is better)
Translates to: GQAADSYRGGGC*SEVAGGVWSAW
Trigger: CCATGCGCTCCAGACACCTCCTGCAACTTCTGAGCAACAGCCACCGCCTCTATATGAATCTGCAGCCTGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000554167.5
ENST00000555197.1
ENST00000557183.1
ENST00000557522.1
CDS GCA 72 bp CTTGCTCTATTCTGGCTCCTGGCTACAACCATTTGCTaGCAGTGGCCTGGTGCTGATGGGGTCTCCACCTAC +
Preference number: 6 (lower is better)
Translates to: LALFWLLATTIC*QWPGADGVSTY
Trigger: GTAGGTGGAGACCCCATCAGCACCAGGCCACTGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CCA 72 bp ACCCTCTCTTCTCCACTGCCGACCACAGGCTCAGGCTaGACTTGCTCTATTCTGGCTCCTGGCTACAACCAT +
Preference number: 6 (lower is better)
Translates to: TLSSPLPTTGSG*TCSILAPGYNH
Trigger: ATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGAGAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS GCA 72 bp TCTTCTCCACTGCCGACCACAGGCTCAGGCTGGACTTaGTCTATTCTGGCTCCTGGCTACAACCATTTGCTG +
Preference number: 6 (lower is better)
Translates to: SSPLPTTGSGWT*SILAPGYNHLL
Trigger: CAGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CCA 72 bp CTATTCTGGCTCCTGGCTACAACCATTTGCTGCCAGTaGCCTGGTGCTGATGGGGTCTCCACCTACTTTCTC +
Preference number: 6 (lower is better)
Translates to: LFWLLATTICCQ*PGADGVSTYFL
Trigger: GAGAAAGTAGGTGGAGACCCCATCAGCACCAGGCCACTGGCAGCAAATGGTTGTAGCCAGGAGCCAGAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CAA 72 bp CTCTTCTCCACTGCCGACCACAGGCTCAGGCTGGACTaGCTCTATTCTGGCTCCTGGCTACAACCATTTGCT +
Preference number: 6 (lower is better)
Translates to: LFSTADHRLRLD*LYSGSWLQPFA
Trigger: AGCAAATGGTTGTAGCCAGGAGCCAGAATAGAGCAAGTCCAGCCTGAGCCTGTGGTCGGCAGTGGAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CAA 72 bp CACCTTCCATCATGGGATGAAGTAACAAGAAGGCCCTaGGTAGATGCTGGCCCCTCAATCCCGGACTTCCCA +
Preference number: 6 (lower is better)
Translates to: HLPSWDEVTRRP*VDAGPSIPDFP
Trigger: TGGGAAGTCCGGGATTGAGGGGCCAGCATCTACCAAGGGCCTTCTTGTTACTTCATCCCATGATGGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553556.2
ENST00000555703.4
CDS TCA 72 bp GACCTGCAATGCGCAGGAAGTCTTTCTGGTAAAGTCTaGTGTCATCGAGGCTCAAGCTGTGTCGATCAGTGG +
Preference number: 6 (lower is better)
Translates to: DLQCAGSLSGKV*CHRGSSCVDQW
Trigger: CCACTGATCGACACAGCTTGAGCCTCGATGACATCAGACTTTACCAGAAAGACTTCCTGCGCATTGCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS TCA 72 bp TCTCCTCTCTTTACCCTTCCACCTTCCATCATGGGATaGAGTAACAAGAAGGCCCTTGGTAGATGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SPLFTLPPSIMG*SNKKALGRCWP
Trigger: GGGCCAGCATCTACCAAGGGCCTTCTTGTTACTTCATCCCATGATGGAAGGTGGAAGGGTAAAGAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553556.2
ENST00000555703.4
CDS TCA 72 bp TTTCCAGCTGGTCCATGTCGAGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACTGCTTCTTCTCCTCTC +
Preference number: 6 (lower is better)
Translates to: FPAGPCRGPGCH*CKIPGTASSPL
Trigger: GAGAGGAGAAGAAGCAGTACCGGGAATCTTACATCAGTGACAACCTGGACCTCGACATGGACCAGCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553556.2
ENST00000555703.4
CDS GCA 72 bp ATGTCTGGGCTGACTTCCAGAGACTCTTCATTCATCTaGTCCAGATCCCGGGGGTCATCAACCAACATCTCT +
Preference number: 6 (lower is better)
Translates to: MSGLTSRDSSFI*SRSRGSSTNIS
Trigger: AGAGATGTTGGTTGATGACCCCCGGGATCTGGAGCAGATGAATGAAGAGTCTCTGGAAGTCAGCCCAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS GCA 72 bp ATGTCTGGGCTGACTTCCAGAGACTCTTCATTCATCTaGTCCAGATCCCGGGGGTCATCAACCAACATCTCA +
Preference number: 6 (lower is better)
Translates to: MSGLTSRDSSFI*SRSRGSSTNIS
Trigger: TGAGATGTTGGTTGATGACCCCCGGGATCTGGAGCAGATGAATGAAGAGTCTCTGGAAGTCAGCCCAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555703.4
CDS TCA 72 bp TTTCCAGCTGGTCCATGTCGAGGTCCAGGTTGTCACTaGTGTAAGATTCCCGGTACTGCTTCTTCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: FPAGPCRGPGCH*CKIPGTASSLR
Trigger: ACGAAGAGAAGAAGCAGTACCGGGAATCTTACATCAGTGACAACCTGGACCTCGACATGGACCAGCTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000554167.5
ENST00000555197.1
ENST00000557522.1
CDS CCA 72 bp TGGAAATTGGATGTGTCCTTAGACTCCTCGTGGCCGTaGCAGTTTATCAGGCTTTCCTTGCTTTCAGTGACC +
Preference number: 6 (lower is better)
Translates to: WKLDVSLDSSWP*QFIRLSLLSVT
Trigger: GGTCACTGAAAGCAAGGAAAGCCTGATAAACTGCCACGGCCACGAGGAGTCTAAGGACACATCCAATTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555952.5
ENST00000557001.5
ENST00000557103.5
CDS CAA 72 bp TTCTGTCTCGGATTCCATTTTGGATGCGAATGGAAATaGGATGTGTCCTTAGACTCCTCGTGGCCGTGGCAG +
Preference number: 6 (lower is better)
Translates to: FCLGFHFGCEWK*DVSLDSSWPWQ
Trigger: CTGCCACGGCCACGAGGAGTCTAAGGACACATCCAATTTCCATTCGCATCCAAAATGGAATCCGAGACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555952.5
ENST00000557001.5
ENST00000557103.5
CDS CAA 72 bp CTACACACCTTAAGGTCTGTATGGAGCAGTATGGGCTaGTATAGCCCAGGCAGGGATAAGGTGGAGGTGTTT +
Preference number: 6 (lower is better)
Translates to: LHTLRSVWSSMG*YSPGRDKVEVF
Trigger: AAACACCTCCACCTTATCCCTGCCTGGGCTATACAAGCCCATACTGCTCCATACAGACCTTAAGGTGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557522.1
CDS CAA 90 bp CAGGCTGTTTACTTCCAGCCACTTCTTTCCCATTCCCATGGCTTTTaGAGTGCCAGAGTGGGGTGCTCAAGGAAGAATGTTTGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: QAVYFQPLLSHSHGF*SARVGCSRKNVWRE
Trigger: TTCTCTCCAAACATTCTTCCTTGAGCACCCCACTCTGGCACTCAAAAAGCCATGGGAATGGGAAAGAAGTGGCTGGAAGTAAACAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000556137.5
CDS CAA 90 bp AGGTCCTCTTTCTGTCTCGGATTCCATTTTGGATGCGAATGGAAATaGGATGTGTCCTTAGACTCCTCGTGGCCGTGGCAGTTTATCAGG +
Preference number: 6 (lower is better)
Translates to: RSSFCLGFHFGCEWK*DVSLDSSWPWQFIR
Trigger: CCTGATAAACTGCCACGGCCACGAGGAGTCTAAGGACACATCCAATTTCCATTCGCATCCAAAATGGAATCCGAGACAGAAAGAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555952.5
ENST00000557001.5
ENST00000557103.5
CDS TCA 72 bp ACTTCCAGCCACTTCTTTCCCATTCCCATGGCTTTTTaGGTGCCAGAGTGGGGTGCTCAAGGAAGAATGTTT +
Preference number: 6 (lower is better)
Translates to: TSSHFFPIPMAF*VPEWGAQGRMF
Trigger: AAACATTCTTCCTTGAGCACCCCACTCTGGCACTCAAAAAGCCATGGGAATGGGAAAGAAGTGGCTGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000556137.5
CDS TCA 72 bp GTCAAAATAGATTCCTCATCTCTACTCCAGACCCACTaGGTCAAAAATCTCCTGGAGGAGGAGCATGAGGCC +
Preference number: 6 (lower is better)
Translates to: VKIDSSSLLQTH*VKNLLEEEHEA
Trigger: GGCCTCATGCTCCTCCTCCAGGAGATTTTTGACTCAGTGGGTCTGGAGTAGAGATGAGGAATCTATTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557522.1
CDS CCA 72 bp TCCTCTTTCTGTCTCGGATTCCATTTTGGATGCGAATaGAAATTGGATGTGTCCTTAGACTCCTCGTGGCCG +
Preference number: 6 (lower is better)
Translates to: SSFCLGFHFGCE*KLDVSLDSSWP
Trigger: CGGCCACGAGGAGTCTAAGGACACATCCAATTTCCATTCGCATCCAAAATGGAATCCGAGACAGAAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555952.5
ENST00000557001.5
ENST00000557103.5
CDS CAA 72 bp TACTTCCAGCCACTTCTTTCCCATTCCCATGGCTTTTaGAGTGCCAGAGTGGGGTGCTCAAGGAAGAATGTT +
Preference number: 6 (lower is better)
Translates to: YFQPLLSHSHGF*SARVGCSRKNV
Trigger: AACATTCTTCCTTGAGCACCCCACTCTGGCACTCAAAAAGCCATGGGAATGGGAAAGAAGTGGCTGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000556137.5
CDS CAA 72 bp TCCAGTGGGCTAATCCAGTATTGTTCTAGCAGCACCTaGAAGCTTAATAGAGCTCAACTACAGCTGCCCCCA +
Preference number: 6 (lower is better)
Translates to: SSGLIQYCSSST*KLNRAQLQLPP
Trigger: TGGGGGCAGCTGTAGTTGAGCTCTATTAAGCTTCAAGGTGCTGCTAGAACAATACTGGATTAGCCCACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554745.1
CDS CAA 90 bp CAGGAAGTAGGCCTCCTCTCGGAGCACACACTGAGAATGAAGAACTaGTTTTCTCAGGTGCCAGTAATAATAGTATCTTGCTGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: QEVGLLSEHTLRMKN*FSQVPVIIVSCCSV
Trigger: GACAGAGCAGCAAGATACTATTATTACTGGCACCTGAGAAAACAAGTTCTTCATTCTCAGTGTGTGCTCCGAGAGGAGGCCTACTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000554167.5
ENST00000554495.5
ENST00000555936.5
ENST00000557405.1
CDS CAA 90 bp AATCTGTTCATGTTTATAAAGATGCAGCTCATGGCCCATGAGCTCTaGCCAGCCATGACAGAAAGAAAAGGAGACACGGAGAGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: NLFMFIKMQLMAHEL*PAMTERKGDTESSS
Trigger: GCTGGAACTCTCCGTGTCTCCTTTTCTTTCTGTCATGGCTGGCAAGAGCTCATGGGCCATGAGCTGCATCTTTATAAACATGAACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CCA 72 bp ATCGAGGCTCAAGCTGTGTCGATCAGTGGAGGTCTTTaGTTTCCGACATATAGTCTGTGGAAGAGAATCAGT +
Preference number: 6 (lower is better)
Translates to: IEAQAVSISGGL*FPTYSLWKRIS
Trigger: ACTGATTCTCTTCCACAGACTATATGTCGGAAACCAAAGACCTCCACTGATCGACACAGCTTGAGCCTCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS CAA 72 bp ATGTTTATAAAGATGCAGCTCATGGCCCATGAGCTCTaGCCAGCCATGACAGAAAGAAAAGGAGACACGGAG +
Preference number: 6 (lower is better)
Translates to: MFIKMQLMAHEL*PAMTERKGDTE
Trigger: CTCCGTGTCTCCTTTTCTTTCTGTCATGGCTGGCAAGAGCTCATGGGCCATGAGCTGCATCTTTATAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS CAA 90 bp GTATTTGAATCCAGTGGGCTAATCCAGTATTGTTCTAGCAGCACCTaGAAGCTTAATAGAGCTCAACTACAGCTGCCCCCAAGTGGGTTA +
Preference number: 6 (lower is better)
Translates to: VFESSGLIQYCSSST*KLNRAQLQLPPSGL
Trigger: TAACCCACTTGGGGGCAGCTGTAGTTGAGCTCTATTAAGCTTCAAGGTGCTGCTAGAACAATACTGGATTAGCCCACTGGATTCAAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554745.1
CDS TCA 72 bp ATCAGTACTCTGGCCACGAAGCTTAACAACTGTTTCTaGAGAGCTCGAGGTGGAAGACCCAATTTCTTTCAC +
Preference number: 6 (lower is better)
Translates to: ISTLATKLNNCF*RARGGRPNFFH
Trigger: GTGAAAGAAATTGGGTCTTCCACCTCGAGCTCTTCAGAAACAGTTGTTAAGCTTCGTGGCCAGAGTACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS GCA 72 bp CTAAGGTCCTCTTTCTGTCTCGGATTCCATTTTGGATaGGAATGGAAATTGGATGTGTCCTTAGACTCCTCG +
Preference number: 6 (lower is better)
Translates to: LRSSFCLGFHFG*EWKLDVSLDSS
Trigger: CGAGGAGTCTAAGGACACATCCAATTTCCATTCGCATCCAAAATGGAATCCGAGACAGAAAGAGGACCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555952.5
ENST00000557001.5
ENST00000557103.5
CDS CCA 72 bp CATCTCTACTCCAGACCCACTGAGTCAAAAATCTCCTaGAGGAGGAGCATGAGGCCCAAAAATATGTATCTT +
Preference number: 6 (lower is better)
Translates to: HLYSRPTESKIS*RRSMRPKNMYL
Trigger: AAGATACATATTTTTGGGCCTCATGCTCCTCCTCCAGGAGATTTTTGACTCAGTGGGTCTGGAGTAGAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557522.1
CDS TCA 72 bp TCTGTTCATGTTTATAAAGATGCAGCTCATGGCCCATaGGCTCTTGCCAGCCATGACAGAAAGAAAAGGAGA +
Preference number: 6 (lower is better)
Translates to: SVHVYKDAAHGP*ALASHDRKKRR
Trigger: TCTCCTTTTCTTTCTGTCATGGCTGGCAAGAGCTCATGGGCCATGAGCTGCATCTTTATAAACATGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557001.5
ENST00000557103.5
CDS TCA 72 bp GACCCACTGAGTCAAAAATCTCCTGGAGGAGGAGCATaGGGCCCAAAAATATGTATCTTTAAAGAAGACTCC +
Preference number: 6 (lower is better)
Translates to: DPLSQKSPGGGA*GPKICIFKEDS
Trigger: GGAGTCTTCTTTAAAGATACATATTTTTGGGCCTCATGCTCCTCCTCCAGGAGATTTTTGACTCAGTGGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557522.1
CDS CCA 72 bp TTCCGACATATAGTCTGTGGAAGAGAATCAGTACTCTaGCCACGAAGCTTAACAACTGTTTCTGAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: FRHIVCGRESVL*PRSLTTVSEEL
Trigger: GAGCTCTTCAGAAACAGTTGTTAAGCTTCGTGGCCAGAGTACTGATTCTCTTCCACAGACTATATGTCGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS CCA 72 bp AAGGCTAAGGTCCTCTTTCTGTCTCGGATTCCATTTTaGATGCGAATGGAAATTGGATGTGTCCTTAGACTC +
Preference number: 6 (lower is better)
Translates to: KAKVLFLSRIPF*MRMEIGCVLRL
Trigger: GAGTCTAAGGACACATCCAATTTCCATTCGCATCCAAAATGGAATCCGAGACAGAAAGAGGACCTTAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555952.5
ENST00000557001.5
ENST00000557103.5
CDS CAA 72 bp TGGTCGATACCCCAAGTGACTTCGTATTGTCGTACCTaGCTGGCCTCTTTCTTCCATTCTTTTGGACAATAT +
Preference number: 6 (lower is better)
Translates to: WSIPQVTSYCRT*LASFFHSFGQY
Trigger: ATATTGTCCAAAAGAATGGAAGAAAGAGGCCAGCAAGGTACGACAATACGAAGTCACTTGGGGTATCGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344768.10
ENST00000555936.5
CDS TCA 72 bp TTTTGGCTTGACTTCTTTCCTTTTCAGTTTAATCGCTaGGTGGTCTCGTGTCCCAATCCCTTTGACCTTCTA +
Preference number: 6 (lower is better)
Translates to: FWLDFFPFQFNR*VVSCPNPFDLL
Trigger: TAGAAGGTCAAAGGGATTGGGACACGAGACCACTCAGCGATTAAACTGAAAAGGAAAGAAGTCAAGCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554745.1
CDS CCA 72 bp CCTCTTGGAAACAACCCAAGATGGGAAGTAAGCCTCTaGCTCGAAGTATTTTCCATAGTGCTTATTCCTTTT +
Preference number: 6 (lower is better)
Translates to: PLGNNPRWEVSL*LEVFSIVLIPF
Trigger: AAAAGGAATAAGCACTATGGAAAATACTTCGAGCCAGAGGCTTACTTCCCATCTTGGGTTGTTTCCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000554167.5
ENST00000554495.5
ENST00000557405.1
CDS CCA 72 bp ACAGCTGCACACAGACGGACTTTACACAACAAACTCTaGAACTTCATCATGAGTGAGATCCAGAGAAAAGTA +
Preference number: 6 (lower is better)
Translates to: TAAHRRTLHNKL*NFIMSEIQRKV
Trigger: TACTTTTCTCTGGATCTCACTCATGATGAAGTTCCAGAGTTTGTTGTGTAAAGTCCGTCTGTGTGCAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000553556.2
ENST00000554167.5
ENST00000557522.1
CDS TCA 72 bp GAACCAGAATCGTCGAAACAAAATTTTCAGTTGCTGTaGGTAAGCAGGCTGTTTACTTCCAGCCACTTCTTT +
Preference number: 6 (lower is better)
Translates to: EPESSKQNFQLL*VSRLFTSSHFF
Trigger: AAAGAAGTGGCTGGAAGTAAACAGCCTGCTTACTCACAGCAACTGAAAATTTTGTTTCGACGATTCTGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356218.8
ENST00000556137.5
CDS GCA 72 bp GAAGACAACAAGACACCTCTTCCACTTTATTACTACTaGCTAAAGTTGCTCTCCAGACACCAGTTCTATAGA +
Preference number: 6 (lower is better)
Translates to: EDNKTPLPLYYY*LKLLSRHQFYR
Trigger: TCTATAGAACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTTGTTGTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS GCA 72 bp CTGCAGCGTAGGCAGCTGAATCCCATTAAGAAATCATaGGAAATCTCTGTATTCCTGATGAAATTTGACAAG +
Preference number: 6 (lower is better)
Translates to: LQRRQLNPIKKS*EISVFLMKFDK
Trigger: CTTGTCAAATTTCATCAGGAATACAGAGATTTCGCATGATTTCTTAATGGGATTCAGCTGCCTACGCTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557103.5
CDS CCA 72 bp CCAAAACAGCTGAGGAATATCTTTGGTTTCTCTGGCTaGTCAGGTTATTTGTATAATGCAGAAGAGAAGGGT +
Preference number: 6 (lower is better)
Translates to: PKQLRNIFGFSG*SGYLYNAEEKG
Trigger: ACCCTTCTCTTCTGCATTATACAAATAACCTGACCAGCCAGAGAAACCAAAGATATTCCTCAGCTGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557522.1
CDS CAA 72 bp AAGACACCTCTTCCACTTTATTACTACTGCCTAAAGTaGCTCTCCAGACACCAGTTCTATAGAACCAATGCT +
Preference number: 6 (lower is better)
Translates to: KTPLPLYYYCLK*LSRHQFYRTNA
Trigger: AGCATTGGTTCTATAGAACTGGTGTCTGGAGAGCAACTTTAGGCAGTAGTAATAAAGTGGAAGAGGTGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555197.1
CDS GCA 72 bp CTGTATTCCCCTCATGGTCAATCCAAGAGTCAGCGATaGTTCAATTTCCCTTTTATCCTTATACAATCTGTA +
Preference number: 6 (lower is better)
Translates to: LYSPHGQSKSQR*FNFPFILIQSV
Trigger: TACAGATTGTATAAGGATAAAAGGGAAATTGAAGCATCGCTGACTCTTGGATTGACCATGAGGGGAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344768.10
ENST00000356218.8
ENST00000395718.6
ENST00000554167.5
ENST00000554495.5
ENST00000557183.1
CDS CCA 72 bp AGCAAACCTTGTGCCAGCCTGTATGTTTGCTGTGGTTaGGTTTTCATAAAGCTGATGAAATTTGACAAGTTT +
Preference number: 6 (lower is better)
Translates to: SKPCASLYVCCG*VFIKLMKFDKF
Trigger: AAACTTGTCAAATTTCATCAGCTTTATGAAAACCCAACCACAGCAAACATACAGGCTGGCACAAGGTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555952.5