RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000171877

Ensembl transcript IDs: ENST00000402883.5, ENST00000417257.6, ENST00000421674.5, ENST00000449926.5, ENST00000451277.5, ENST00000458630.5, ENST00000479319.1, ENST00000484674.5, ENST00000558108.6, ENST00000618556.4, ENST00000636859.1

Found 1078 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: TALLRVLGTLLSLGP*VMEGQLRLGTIPAL
Trigger: CAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 90 bp GATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCC +
Preference number: 1 (lower is better)
Translates to: DVNSSSAGPGDAAQP*AMGYGGTAPAGNHP
Trigger: GGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 90 bp GCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCACAGGGGTaGGCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCA +
Preference number: 1 (lower is better)
Translates to: AGKATSAPGCAQPQG*AARCLQGCRPRLQS
Trigger: TGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 90 bp TTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTT +
Preference number: 1 (lower is better)
Translates to: FCGSWGRCSALGHGL*RDSSGWEPSLLCVF
Trigger: AAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 90 bp CACAGGGGTGGGCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTTCT +
Preference number: 1 (lower is better)
Translates to: HRGGQHAVCRAVGLV*NHSYSLIAICPAAS
Trigger: AGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 90 bp GGGAGGAGTCATGCCTTCTCAGGTGTCAATGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAACCATCGCCTGTTCCTCCTCGGGCC +
Preference number: 1 (lower is better)
Translates to: GRSHAFSGVNEQAHH*ADFAGKPSPVPPRA
Trigger: GGCCCGAGGAGGAACAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAGGCATGACTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
3UTR GCA 90 bp CTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCC +
Preference number: 1 (lower is better)
Translates to: LQGCRPRLQSQLLAH*YLSGCFSREAGRCP
Trigger: GGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 90 bp TCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTA +
Preference number: 1 (lower is better)
Translates to: SGCFSREAGRCPHGK*NALVWNGHCPVRTL
Trigger: TAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 90 bp GAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTaGGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCC +
Preference number: 1 (lower is better)
Translates to: ELGPRIPHSPFICLC*VLRGLPSARMVMLS
Trigger: GGAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CCA 90 bp GGCAGGAAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATG +
Preference number: 1 (lower is better)
Translates to: GRKVSPWEVERTGVE*ALSRKDSRPSMMEM
Trigger: CATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 90 bp GTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGT +
Preference number: 1 (lower is better)
Translates to: VPRWVPLLGMGSRVP*STWLVFGRSHAFSG
Trigger: ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
3UTR TCA 90 bp ATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTTCTCACGTaGGGCAGGAAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTG +
Preference number: 1 (lower is better)
Translates to: ITATRSLLSVRLLLT*GRKVSPWEVERTGV
Trigger: CACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 90 bp GAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTaGTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTT +
Preference number: 1 (lower is better)
Translates to: EELGPRIPHSPFICL*CVLRGLPSARMVML
Trigger: AAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR GCA 90 bp AGAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTG +
Preference number: 1 (lower is better)
Translates to: RVEELGPRIPHSPFI*LCCVLRGLPSARMV
Trigger: CACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR GCA 90 bp CCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTGGAAC +
Preference number: 1 (lower is better)
Translates to: PRLQSQLLAHCYLSG*FSREAGRCPHGKWN
Trigger: GTTCCACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 90 bp TCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCACAGGG +
Preference number: 1 (lower is better)
Translates to: SDSFSSSMLQVAPLI*RESNISSRLCSATG
Trigger: CCCTGTGGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 90 bp TGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCA +
Preference number: 1 (lower is better)
Translates to: WLQIPSPPQCCRWLH*SAGKATSAPGCAQP
Trigger: TGGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCC +
Preference number: 1 (lower is better)
Translates to: RLQWTLSHERRTWYM*RWFRDGSHCWEWVA
Trigger: GGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR CCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTGTCAATGAG +
Preference number: 1 (lower is better)
Translates to: WVPLLGMGSRVPWST*LVFGRSHAFSGVNE
Trigger: CTCATTGACACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 90 bp CAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTC +
Preference number: 1 (lower is better)
Translates to: QWTLSHERRTWYMCR*FRDGSHCWEWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR CCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: HPPRLQWTLSHERRT*YMCRWFRDGSHCWE
Trigger: TTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR TCA 90 bp TATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTATGCAGAGGATGACCCTAGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: YACAACFEDFPLQGW*CFPRTYAEDDPRGQ
Trigger: CTGCCCCCTAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 90 bp CACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGCGGATTTTGCAGGCAAACCATCGCC +
Preference number: 1 (lower is better)
Translates to: HLASFWEESCLLRCQ*AGSPLSGFCRQTIA
Trigger: GGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 90 bp CCCTTTCTTCTTCTGGGAAACACCCTCCTAGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCG +
Preference number: 1 (lower is better)
Translates to: PFLLLGNTLLGCSGL*VMRGGLGICADGSA
Trigger: CGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCCAGAAGAAGAAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR GCA 90 bp CTCGCCCTTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTaGAAGGATGGTGATGCTTTCCTAGAACTTATGCAGAGGATGACC +
Preference number: 1 (lower is better)
Translates to: LALHMPVLRASRTSL*KDGDAFLELMQRMT
Trigger: GGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 90 bp TGGTTTTCTGAAGCAAAGCAAGAGCCACCTCCACTTCCACATAGATaGGCAGAGCCTGGGGCTTCTATGCCTGATCCAACAGCACCACAG +
Preference number: 1 (lower is better)
Translates to: WFSEAKQEPPPLPHR*AEPGASMPDPTAPQ
Trigger: CTGTGGTGCTGTTGGATCAGGCATAGAAGCCCCAGGCTCTGCTCATCTATGTGGAAGTGGAGGTGGCTCTTGCTTTGCTTCAGAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458630.5
3UTR CCA 90 bp AGCCTATCCCTTTCTTCTTCTGGGAAACACCCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGG +
Preference number: 1 (lower is better)
Translates to: SLSLSSSGKHPPRLQ*TLSHERRTWYMCRW
Trigger: CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCCAGAAGAAGAAAGGGATAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR TCA 90 bp AGTGGACCCTCTTGTTTCCTTGAAGAACAACAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCATTTCCTGACACGTCCTTACATGGGT +
Preference number: 1 (lower is better)
Translates to: SGPSCFLEEQQTQKE*RPEMQHFLTRPYMG
Trigger: ACCCATGTAAGGACGTGTCAGGAAATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421674.5
3UTR TCA 90 bp GGTCCCAGATCTTTGATACATGTCAGGCATGGAAACAGAGCTGACTaGCCCTCTTCTGCTAACATACTGGTAAGGATCAGTTTTATTGTC +
Preference number: 1 (lower is better)
Translates to: GPRSLIHVRHGNRAD*PSSANILVRISFIV
Trigger: GACAATAAAACTGATCCTTACCAGTATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTTTCCATGCCTGACATGTATCAAAGATCTGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR GCA 90 bp GCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTaGTGGTTAGTTGTTCAAGCACCCTTTAAACAAGCAACCCTAGTG +
Preference number: 1 (lower is better)
Translates to: AFQYLILPIWHQTSL*WLVVQAPFKQATLV
Trigger: CACTAGGGTTGCTTGTTTAAAGGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CCA 90 bp TTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTaGTTAGTTGTTCAAGCACCCTTTAAACAAGCAACCCTAGTGCCT +
Preference number: 1 (lower is better)
Translates to: FQYLILPIWHQTSLC*LVVQAPFKQATLVP
Trigger: AGGCACTAGGGTTGCTTGTTTAAAGGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 90 bp CTTTGCTATGTAGATGACAAGTGGCAGTGGCTAGTTGATTTTAACTaGCCCCTAATCTCTACTAGGATCTCCTTCGGTTTGTATTGTCAC +
Preference number: 1 (lower is better)
Translates to: LCYVDDKWQWLVDFN*PLISTRISFGLYCH
Trigger: GTGACAATACAAACCGAAGGAGATCCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAGCCACTGCCACTTGTCATCTACATAGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 90 bp ACTTTGTCCAACATTTCTGACAGAACTATCTATCTCTGGTACCACTaGATTCGTTTAACGCCCCTGGAGCACTATAAAAGTCTTGAGGTT +
Preference number: 1 (lower is better)
Translates to: TLSNISDRTIYLWYH*IRLTPLEHYKSLEV
Trigger: AACCTCAAGACTTTTATAGTGCTCCAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATAGATAGTTCTGTCAGAAATGTTGGACAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 90 bp GTTGAGGCTATCACTCACTGCATAGAAACACCAGATTCTACAAACTaGGGTAGGAGCACTACACTAAAAGGTAATCTTCTATGTTGCATA +
Preference number: 1 (lower is better)
Translates to: VEAITHCIETPDSTN*GRSTTLKGNLLCCI
Trigger: TATGCAACATAGAAGATTACCTTTTAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 90 bp TGGAATACTGCATCTGTCTCTAATGTGAATATGAAAGGTCAGAGTTaGGGCTATCACTCACTGCATAGAAACACCAGATTCTACAAACTG +
Preference number: 1 (lower is better)
Translates to: WNTASVSNVNMKGQS*GYHSLHRNTRFYKL
Trigger: CAGTTTGTAGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTCAACTCTGACCTTTCATATTCACATTAGAGACAGATGCAGTATTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTCTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 2 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLLFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGCCACTTCCACATAGATaGGCAGAGCCTGGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWPLPHR*AEPGAS
Trigger: AGAAGCCCCAGGCTCTGCTCATCTATGTGGAAGTGG...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458630.5
3UTR-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 2 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CCA 90 bp GCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: ARCLQGCRPRLQSQLLAHLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...ATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp AGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: SWGAGFRFLLLLNAAGGSLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...GGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp GCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 2 (lower is better)
Translates to: AARCLQGCRPRLQSQLLARKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...AGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CAA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTT +
Preference number: 2 (lower is better)
Translates to: EEDLVYVPMVPRWVP*LGMGSRVPWSTWLV
Trigger: AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp GGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCAAGAAAAGACGCTTCTaGTTAGTTACTCCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: GSWGRCSALGHGLWRDSSKKRRF*LVTPEP
Trigger: GGGCTCTGGAGTAACTAATCAGAAGCGTCTTTTCTT...GGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp GCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTTGGGGCTTCTATGCCTaGTCCAACAGCACCACAGAG +
Preference number: 2 (lower is better)
Translates to: AICPAASHVRQEGVPMGSWGFYA*SNSTTE
Trigger: CTCTGTGGTGCTGTTGGATCAGGCATAGAAGCCCCA...ACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458630.5
3UTR-3UTR GCA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 2 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSICEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTACGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 2 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 2 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp AAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 2 (lower is better)
Translates to: KWNALVWNGHCPVRTLGLDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...AAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 2 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CAA 90 bp CTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCC +
Preference number: 2 (lower is better)
Translates to: LASDSFSSSMLQVAP*ICRESNISSRLCSA
Trigger: GGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGCCCTCAAGCCCCAGATaGCTTAGAAATCTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRPSSPR*LRNLSL
Trigger: CAGGGAGAGATTTCTAAGTCATCTGGGGCTTGAGGG...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp ATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGGAGGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 2 (lower is better)
Translates to: ITEKGNVKVRLGKDDQEEGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...CTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 2 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp GATGGAGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 2 (lower is better)
Translates to: DGDVNSSSAGPGDAAQPWFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...CCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp GCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 2 (lower is better)
Translates to: ARCLQGCRPRLQSQLLAHCADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...ATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 2 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLISMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 2 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLICCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 2 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 2 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 2 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLIDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp AGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 2 (lower is better)
Translates to: SWGAGFRFLLLLNAAGGSDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...GGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp GATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 2 (lower is better)
Translates to: DSFSSSMLQVAPLICRESWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...GCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp CTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 2 (lower is better)
Translates to: LLLNAAGGSIDLPGKQHQRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...CTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 2 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 2 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR GCA 90 bp GCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 2 (lower is better)
Translates to: ARCLQGCRPRLQSQLLAHFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...ATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451277.5
ENST00000458630.5
3UTR CAA 90 bp CGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCCATGACTTCCTTTGCAACTCGGCCA +
Preference number: 2 (lower is better)
Translates to: RLGTIPALCISGGSR*ILALDSMTSFATRP
Trigger: TGGCCGAGTTGCAAAGGAAGTCATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp CTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 2 (lower is better)
Translates to: LLNAAGGSIDLPGKQHQLCADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...GAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCTCGAGGACTTCCCTCTaGAAGGATGGTGATGCTTTC +
Preference number: 2 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSSRTSL*KDGDAF
Trigger: GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGA...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCTATGCCTGTGCTGCGTaGTTCGAGGACTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVYACAA*FEDFPL
Trigger: CAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATA...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTTTCATATGCCTGTGCTaGGTGCTTCGAGGACTTCCC +
Preference number: 2 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFFICLC*VLRGLP
Trigger: GGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp GCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 2 (lower is better)
Translates to: AVCRAVGLVCNHSYSLIARINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...AGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTRDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTACCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 2 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGGAAACAGAGCTGACTaGCCCTCTTCTGCTAACATA +
Preference number: 2 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSGNRAD*PSSANI
Trigger: TATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTTTCC...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCGGAAGACTAAATACCTaGTCCAACAGCACCACAGAG +
Preference number: 2 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSGRLNT*SNSTTE
Trigger: CTCTGTGGTGCTGTTGGATCAGGTATTTAGTCTTCC...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421674.5
3UTR-3UTR TCA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 2 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSIFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp AAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 2 (lower is better)
Translates to: KVSPWEVERTGVEWALSRLSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...ACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCCTAAGTGTTGGTCTCTaGCACGGTCACATTCTGTGT +
Preference number: 2 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFLSVGL*HGHILC
Trigger: ACACAGAATGTGACCGTGGCAGAGACCAACACTTAG...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTTCGAGGACTTCCCTCTaGAAGGATGGTGATGCTTTC +
Preference number: 2 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFSRTSL*KDGDAF
Trigger: GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGA...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp CATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTATTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 2 (lower is better)
Translates to: HGKWNALVWNGHCPVRTLFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...TAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCCAGACATCTCTTTGCTaGTTAGTTGTTCAAGCACCC +
Preference number: 2 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALQTSLC*LVVQAP
Trigger: GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTG...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp CTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTTCAGTGTTATGCCTTTaGCATTTTCCAAGTATATCC +
Preference number: 2 (lower is better)
Translates to: LSLGPWVMEGQLRLGTIPSVLCL*HFPSIS
Trigger: GGATATACTTGGAAAATGCCAAAGGCATAACACTGA...AGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp CATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 2 (lower is better)
Translates to: HGKWNALVWNGHCPVRTLRINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...TAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGTATCTCTGGTACCACTaGATTCGTTTAACGCCCCTG +
Preference number: 2 (lower is better)
Translates to: FICLCCVLRGLPSARMVMYLWYH*IRLTPL
Trigger: CAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATA...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCCCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTAT +
Preference number: 2 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFPLQGW*CFPRTY
Trigger: ATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGG...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCGGTCAAGTCTACAAGTaGCTTGTTCTGTTCTGCGTT +
Preference number: 2 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSGQVYK*LVLFCV
Trigger: AACGCAGAACAGAACAAGTCACTTGTAGACTTGACC...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTATGAAAGGTCAGAGTTaGGGCTATCACTCACTGCAT +
Preference number: 2 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSMKGQS*GYHSLH
Trigger: ATGCAGTGAGTGATAGCCTCAACTCTGACCTTTCAT...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 2 (lower is better)
Translates to: VMEGQLRLGTIPALCISGPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...ACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATCACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGA +
Preference number: 2 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDHSPFI*LCCVLR
Trigger: TCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTG...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCCTGTGGCTGTTTTTGTaGTGTGATGGCAGAATTGAG +
Preference number: 2 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFLWLFL*CDGRIE
Trigger: CTCAATTCTGCCATCACAGCACAAAAACAGCCACAG...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp CGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: RISRKKAMSRSDSVRMIRCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...CCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp TGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 2 (lower is better)
Translates to: WRISRKKAMSRSDSVRMIAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...GATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTC +
Preference number: 2 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGDGSHC*EWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATC...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTACCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTAT +
Preference number: 2 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLPLQGW*CFPRTY
Trigger: ATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGG...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp AACTCGGGGGTCTGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGAAGAAAAGACGCTTCTaGTTAGTTACTCCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: NSGVWRISRKKAMSRSDSKKRRF*LVTPEP
Trigger: GGGCTCTGGAGTAACTAATCAGAAGCGTCTTTTCTT...CGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 2 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTTATACAAAACTATGGTaGTGCCCACTAGGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSYTKLW*CPLGSR
Trigger: TCTAGAGCCTAGTGGGCATCACCATAGTTTTGTATA...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCTATACAAAACTATGGTaGTGCCCACTAGGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSYTKLW*CPLGSR
Trigger: TCTAGAGCCTAGTGGGCATCACCATAGTTTTGTATA...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGCACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGA +
Preference number: 2 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLHSPFI*LCCVLR
Trigger: TCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTG...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTCCACTTGAATCTATTTaGAACCTCCGAAATAAGCAG +
Preference number: 2 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLIPLESI*NLRNKQ
Trigger: CTGCTTATTTCGGAGGTTGCAAATAGATTCAAGTGG...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCAAAAGATTCTTTTCCTaGTCCCTTCTAAGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSKRFFS*SLLRLL
Trigger: CAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTGCTCTACTTTTGTGTaGGTCCAGGAATATGTCCAT +
Preference number: 2 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLCSTFV*VQEYVH
Trigger: ATGGACATATTCCTGGACCCACACAAAAGTAGAGCA...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATGTTCTGTTCTGCGTTTaGGGCTGTCCAATTAGGGTA +
Preference number: 2 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHVLFCV*GCPIRV
Trigger: TACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp TGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 2 (lower is better)
Translates to: WRISRKKAMSRSDSVRMIHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...GATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTAATCTCTCCCTGAGATaGAAACAGGATCTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFNLSLR*KQDLVC
Trigger: ACACACAAGATCCTGTTTTCATCTCAGGGAGAGATT...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTACTGTGTAGCACTTaGCATAAGTTGATTGACCTC +
Preference number: 2 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLLLCST*HKLIDL
Trigger: GAGGTCAATCAACTTATGTCAAGTGCTACACAGTAA...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 2 (lower is better)
Translates to: MRGGLGICADGSAMGPIALSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAATGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 2 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKCRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGCCCTTCATATGCCTGTaGTGCGTGCTTCGAGGACTT +
Preference number: 2 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGPFICL*CVLRGL
Trigger: AAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGG...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCCTGTGGCTGTTTTTGTaGTGTGATGGCAGAATTGAG +
Preference number: 2 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVLWLFL*CDGRIE
Trigger: CTCAATTCTGCCATCACAGCACAAAAACAGCCACAG...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp CTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTG +
Preference number: 2 (lower is better)
Translates to: LLNAAGGSIDLPGKQHQLRSLLI*RKTKYL
Trigger: CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...GAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421674.5
3UTR-3UTR GCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAACGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 2 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGGGTGGTCCCTTCAGATaGCCACTCTGCTCAGATTTG +
Preference number: 2 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGGGPFR*PLCSDL
Trigger: CAAATCTGAGCAGAGTGGGCATCTGAAGGGACCACC...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTA +
Preference number: 2 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALRSLLI*RKTKYL
Trigger: TAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458630.5
3UTR-3UTR CCA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATTCTACATCTAAGTGTTaGTCTCTGCCACGGTCACAT +
Preference number: 2 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHSTSKC*SLPRSH
Trigger: ATGTGACCGTGGCAGAGACCAACACTTAGATGTAGA...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp TTTGCAGGCAAACCATCGCCTGAGGGGACAAAAGTATTGATAGTGGAATTGTTCTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 2 (lower is better)
Translates to: FAGKPSPEGTKVLIVELFWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...GAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATTCAAACTCGGGGGTCTaGCGGATATCACGGAAAAAG +
Preference number: 2 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDSNSGV*RISRKK
Trigger: CTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 2 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp GATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 2 (lower is better)
Translates to: DITEKGNVKVRLGKDDQECADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...CTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCGAGGCTATCACTCACTaGATAGAAACACCAGATTCT +
Preference number: 2 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVEAITH*IETPDS
Trigger: AGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTC...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp TGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCCCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: WRISRKKAMSRSDSVRMIPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...GATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR GCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAAGGTGGTCCCTTCAGATaGCCACTCTGCTCAGATTTG +
Preference number: 2 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKGGPFR*PLCSDL
Trigger: CAAATCTGAGCAGAGTGGGCATCTGAAGGGACCACC...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTGTTCTGTTCTGCGTTTaGGGCTGTCCAATTAGGGTA +
Preference number: 2 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTVLFCV*GCPIRV
Trigger: TACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTATGTAGATGACAAGTaGCAGTGGCTAGTTGATTTT +
Preference number: 2 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLYVDDK*QWLVDF
Trigger: AAAATCAACTAGCCACTGCCACTTGTCATCTACATA...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAACCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 2 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATTTAGAAATCTCTCCCTaGGATGAAAACAGGATCTTG +
Preference number: 2 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHLEISP*DENRIL
Trigger: CAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAA...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp TCCCTCTGCAAGGATGGTGATGCTTTCCTAGAACTTATGCAGAGGATGACCCTAGGTCAAGTCTACAAGTaGCTTGTTCTGTTCTGCGTT +
Preference number: 2 (lower is better)
Translates to: SLCKDGDAFLELMQRMTLGQVYK*LVLFCV
Trigger: AACGCAGAACAGAACAAGTCACTTGTAGACTTGACC...TAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTCCAGATTCTACAAACTaGGGTAGGAGCACTACACTA +
Preference number: 2 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTPDSTN*GRSTTL
Trigger: TAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGG...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGCAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCAT +
Preference number: 2 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGQTQKE*RPEMQH
Trigger: ATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTG...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421674.5
3UTR-3UTR TCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTTGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATTGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR GCA 90 bp CCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCCTGTGGCTGTTTTTGTaGTGTGATGGCAGAATTGAG +
Preference number: 2 (lower is better)
Translates to: PIRVSAAALLLCGSRNMSLWLFL*CDGRIE
Trigger: CTCAATTCTGCCATCACAGCACAAAAACAGCCACAG...GGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGCCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTAT +
Preference number: 2 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGPLQGW*CFPRTY
Trigger: ATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGG...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGGGTCAAGTCTACAAGTaGCTTGTTCTGTTCTGCGTT +
Preference number: 2 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLGQVYK*LVLFCV
Trigger: AACGCAGAACAGAACAAGTCACTTGTAGACTTGACC...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGCCAGATTCTACAAACTaGGGTAGGAGCACTACACTA +
Preference number: 2 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGPDSTN*GRSTTL
Trigger: TAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGG...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp ATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCTTTTGATCTGCAGGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAAT +
Preference number: 2 (lower is better)
Translates to: IRCFTEESAMVEIPFDLQGRDPF*SAGRLN
Trigger: ATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACC...CTGCAGATCAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp TGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 2 (lower is better)
Translates to: WRISRKKAMSRSDSVRMIPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...GATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR TCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 2 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGACTTACCCCACCCCTaGTGCTGCTGTTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLDLPHP*CCCCCS
Trigger: GCTACAGCAACAGCAGCATCAGGGGTGGGGTAAGTC...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTAAAAGATTCTTTTCCTaGTCCCTTCTAAGGCTGTTG +
Preference number: 2 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLKRFFS*SLLRLL
Trigger: CAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAACATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 2 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR TCA 90 bp GATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGGCCTTAGGGTGTCTATaGTTTGGATGGATTTGGTTT +
Preference number: 2 (lower is better)
Translates to: DITEKGNVKVRLGKDDQEALGCL*FGWIWF
Trigger: AAACCAAATCCATCCAAATCATAGACACCCTAAGGC...CTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458630.5
3UTR-3UTR GCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAACCCTTCATATGCCTGTaGTGCGTGCTTCGAGGACTT +
Preference number: 2 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQPFICL*CVLRGL
Trigger: AAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGG...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATCATCAGACATCTCTTTaGTGGTTAGTTGTTCAAGCA +
Preference number: 2 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDHQTSL*WLVVQA
Trigger: TGCTTGAACAACTAACCAGCAAAGAGATGTCTGATG...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp GCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCCACTTGAATCTATTTaGAACCTCCGAAATAAGCAG +
Preference number: 2 (lower is better)
Translates to: ACRRLGSRFHISRGAYTLPLESI*NLRNKQ
Trigger: CTGCTTATTTCGGAGGTTGCAAATAGATTCAAGTGG...AAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCGTTCTGTTCTGCGTTTaGGGCTGTCCAATTAGGGTA +
Preference number: 2 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMAVLFCV*GCPIRV
Trigger: TACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAATGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 2 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTTTTGTCCAACATTTCTaGCAGAACTATCTATCTCTG +
Preference number: 2 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCFVQHF*QNYLSL
Trigger: CAGAGATAGATAGTTCTGTCAGAAATGTTGGACAAA...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCTAAGTGTTGGTCTCTaGCACGGTCACATTCTGTGT +
Preference number: 2 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSLSVGL*HGHILC
Trigger: ACACAGAATGTGACCGTGGCAGAGACCAACACTTAG...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTCACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGA +
Preference number: 2 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFHSPFI*LCCVLR
Trigger: TCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTG...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp GGTGTTTCCCTGAGTCATAATCCCCAATCTCCGCTTGAAGGATGTAAGCTGCTATCAGTGTTATGCCTTTaGCATTTTCCAAGTATATCC +
Preference number: 2 (lower is better)
Translates to: GVSLSHNPQSPLEGCKLLSVLCL*HFPSIS
Trigger: GGATATACTTGGAAAATGCCAAAGGCATAACACTGA...TAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR CAA 90 bp AGATTCCAGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTaGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCTT +
Preference number: 2 (lower is better)
Translates to: RFQLCFSIPVFDLAH*ASDISLLVSCSSTL
Trigger: AAGGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCTGGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CAA 90 bp CCTCTTCCCTTCTTAGATTCCAGCTGTGTTTTAGCATTCCAGTATTaGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTT +
Preference number: 2 (lower is better)
Translates to: PLPFLDSSCVLAFQY*ILPIWHQTSLCWLV
Trigger: AACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCTGGAATCTAAGAAGGGAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTTATCTCTGGTACCACTaGATTCGTTTAACGCCCCTG +
Preference number: 2 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCYLWYH*IRLTPL
Trigger: CAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATA...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAATATCTCTGGTACCACTaGATTCGTTTAACGCCCCTG +
Preference number: 2 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQYLWYH*IRLTPL
Trigger: CAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATA...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCCAGATTCTACAAACTaGGGTAGGAGCACTACACTA +
Preference number: 2 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSPDSTN*GRSTTL
Trigger: TAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGG...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTTTCATATGCCTGTGCTaGGTGCTTCGAGGACTTCCC +
Preference number: 2 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFFICLC*VLRGLP
Trigger: GGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTTTCATATGCCTGTGCTaGGTGCTTCGAGGACTTCCC +
Preference number: 2 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVFICLC*VLRGLP
Trigger: GGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTCCCTTCATATGCCTGTaGTGCGTGCTTCGAGGACTT +
Preference number: 2 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVPFICL*CVLRGL
Trigger: AAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGG...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGGAACATACTAGGATATaGAATACTGCATCTGTCTCT +
Preference number: 2 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGEHTRI*NTASVS
Trigger: AGAGACAGATGCAGTATTCCATATCCTAGTATGTTC...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GTTAGAAATGGCATAGACTACTGTACTGTTAGAACTCTAGACACAAGGAACATAGGAAACAGAGCTGACTaGCCCTCTTCTGCTAACATA +
Preference number: 2 (lower is better)
Translates to: VRNGIDYCTVRTLDTRNIGNRAD*PSSANI
Trigger: TATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTTTCC...TATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCATTTCTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR GCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTGAGGCTATCACTCACTaGATAGAAACACCAGATTCT +
Preference number: 2 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSEAITH*IETPDS
Trigger: AGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTC...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CAA 90 bp GGGGCTTCTATGCCTGATCCAACAGCACCACAGAGTTTATCCATTTaGATTTTAAATCTTCAGTATCTCCCAGCTTATCTTTCAGTGTTA +
Preference number: 2 (lower is better)
Translates to: GASMPDPTAPQSLSI*ILNLQYLPAYLSVL
Trigger: TAACACTGAAAGATAAGCTGGGAGATACTGAAGATTTAAAATCAAAATGGATAAACTCTGTGGTGCTGTTGGATCAGGCATAGAAGCCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458630.5
3UTR-3UTR TCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAAATCTCTCCCTGAGATaGAAACAGGATCTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQNLSLR*KQDLVC
Trigger: ACACACAAGATCCTGTTTTCATCTCAGGGAGAGATT...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTCCTTTGCTATGTAGATaGCAAGTGGCAGTGGCTAGT +
Preference number: 2 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVPLLCR*QVAVAS
Trigger: ACTAGCCACTGCCACTTGTCATCTACATAGCAAAGG...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp GTTAGAAATGGCATAGACTACTGTACTGTTAGAACTCTAGACACAAGGAACATATCTACATCTAAGTGTTaGTCTCTGCCACGGTCACAT +
Preference number: 2 (lower is better)
Translates to: VRNGIDYCTVRTLDTRNISTSKC*SLPRSH
Trigger: ATGTGACCGTGGCAGAGACCAACACTTAGATGTAGA...TATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCATTTCTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAACTAGTTGATTTTAACTaGCCCCTAATCTCTACTAGG +
Preference number: 2 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQLVDFN*PLISTR
Trigger: CCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAG...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTATTGATCTTGCCCATTTaGCATCAGACATCTCTTTGC +
Preference number: 2 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLLILPI*HQTSLC
Trigger: GCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAA...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CAA 90 bp CATTTACAAATTATCTGTGGCTGTTTTTGTGCTGTGATGGCAGAATaGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTA +
Preference number: 2 (lower is better)
Translates to: HLQIICGCFCAVMAE*SSCDTVWRAKPKYL
Trigger: TAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTCTGCCATCACAGCACAAAAACAGCCACAGATAATTTGTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CAA 90 bp ATGGCCTGTAGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATaGGAACACAGCCATGTTCCTTCATTTACAAATTATCTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: MACRLNSAHCFHKVL*EHSHVPSFTNYLWL
Trigger: CAGCCACAGATAATTTGTAAATGAAGGAACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCTACAGGCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTTTTGTCCAACATTTCTaGCAGAACTATCTATCTCTG +
Preference number: 2 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCFVQHF*QNYLSL
Trigger: CAGAGATAGATAGTTCTGTCAGAAATGTTGGACAAA...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GTTAGAAATGGCATAGACTACTGTACTGTTAGAACTCTAGACACAAGGAACATATTAGAAATCTCTCCCTaGGATGAAAACAGGATCTTG +
Preference number: 2 (lower is better)
Translates to: VRNGIDYCTVRTLDTRNILEISP*DENRIL
Trigger: CAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAA...TATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCATTTCTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTTTACTGTGTAGCACTTaGCATAAGTTGATTGACCTC +
Preference number: 2 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFLLCST*HKLIDL
Trigger: GAGGTCAATCAACTTATGTCAAGTGCTACACAGTAA...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR TCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTCTAGTTGATTTTAACTaGCCCCTAATCTCTACTAGG +
Preference number: 2 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVLVDFN*PLISTR
Trigger: CCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAG...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CCA 72 bp TCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: SWGRCSALGHGL*RDSSGWEPSLL
Trigger: GAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 72 bp GCTGTGCTCAGCCACAGGGGTGGGCAGCACGCTGTCTaGAGGGCTGTAGGCCTCGTCTGCAATCACAGCTAC +
Preference number: 3 (lower is better)
Translates to: AVLSHRGGQHAV*RAVGLVCNHSY
Trigger: GTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTGTGGCTGAGCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 72 bp AGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGGTTATGGAGGGACAGC +
Preference number: 3 (lower is better)
Translates to: RCEQLFCGSWGR*SALGHGLWRDS
Trigger: GCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 3 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR GCA 72 bp GAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: ELGPRIPHSPFI*LCCVLRGLPSA
Trigger: TGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR GCA 72 bp GGGCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTCATTGCTATCTGTCCG +
Preference number: 3 (lower is better)
Translates to: GQHAVCRAVGLV*NHSYSLIAICP
Trigger: CGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 72 bp TATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: YMCRWFRDGSHC*EWVAGFLGPPG
Trigger: GCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CAA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 3 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR TCA 72 bp TCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTC +
Preference number: 3 (lower is better)
Translates to: SRKDSRPSMMEM*TALLRVLGTLL
Trigger: GAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 72 bp TGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCT +
Preference number: 3 (lower is better)
Translates to: WYMCRWFRDGSH*WEWVAGFLGPP
Trigger: AGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR CCA 72 bp GTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATG +
Preference number: 3 (lower is better)
Translates to: VSPWEVERTGVE*ALSRKDSRPSM
Trigger: CATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 72 bp GGAAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTT +
Preference number: 3 (lower is better)
Translates to: GRCPHGKWNALV*NGHCPVRTLGL
Trigger: AAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 72 bp TTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAATGGGCACTGTCCCGTA +
Preference number: 3 (lower is better)
Translates to: FSREAGRCPHGK*NALVWNGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 72 bp CAGCTCTCCCCCAAGGGCCTCCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAAT +
Preference number: 3 (lower is better)
Translates to: QLSPKGLHLCSS*GAGFRFLLLLN
Trigger: ATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTGGAGGCCCTTGGGGGAGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 72 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCC +
Preference number: 3 (lower is better)
Translates to: WVPLLGMGSRVP*STWLVFGRSHA
Trigger: GGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR CCA 72 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCT +
Preference number: 3 (lower is better)
Translates to: EEDLVYVPMVPR*VPLLGMGSRVP
Trigger: AGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CAA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 3 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 72 bp CATGCCTTCTCAGGTGTCAATGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAACCATCGCCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: HAFSGVNEQAHH*ADFAGKPSPEG
Trigger: CCCCTCAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR GCA 72 bp TGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: CRPRLQSQLLAH*YLSGCFSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR GCA 72 bp TTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: FSSSMLQVAPLI*RESNISSRLCS
Trigger: TGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR CCA 72 bp TTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: LLGMGSRVPWST*LVFGRSHAFSG
Trigger: ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
3UTR-3UTR CAA 90 bp GTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 3 (lower is better)
Translates to: VAPLICRESNISSRLCSASSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...GGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 3 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSILCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 72 bp ATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACATCAGCTCCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: IPSPPQCCRWLH*SAGKATSAPGC
Trigger: ACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 72 bp CATGCCTTCTCAGGTGTCAATGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAACCATCGCCTGTTCCT +
Preference number: 3 (lower is better)
Translates to: HAFSGVNEQAHH*ADFAGKPSPVP
Trigger: AGGAACAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
3UTR CCA 72 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTCCGCGATGGGTCCCAT +
Preference number: 3 (lower is better)
Translates to: RLQWTLSHERRT*YMCRWFRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR TCA 72 bp GCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTATGCAGAGGATGACCCT +
Preference number: 3 (lower is better)
Translates to: AACFEDFPLQGW*CFPRTYAEDDP
Trigger: AGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR GCA 72 bp TGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGGTCCCATTGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: WTLSHERRTWYM*RWFRDGSHCWE
Trigger: TTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR CCA 72 bp TTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTA +
Preference number: 3 (lower is better)
Translates to: LSHERRTWYMCR*FRDGSHCWEWV
Trigger: TACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CAA 90 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTGCTGTGATGGCAGAATaGAGCAGTTGTGACACAGTA +
Preference number: 3 (lower is better)
Translates to: HMPVLRASRTSLCKDGDAAVMAE*SSCDTV
Trigger: TACTGTGTCACAACTGCTCAATTCTGCCATCACAGC...AGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTTACTCCAGAGCCCTTaGAGAGTGACCAGTTCAAGA +
Preference number: 3 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLLLQSP*RVTSSR
Trigger: TCTTGAACTGGTCACTCTCAAAGGGCTCTGGAGTAA...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp CATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 3 (lower is better)
Translates to: HGKWNALVWNGHCPVRTLSSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...TAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp CTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 3 (lower is better)
Translates to: LLLNAAGGSIDLPGKQHQQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...CTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 72 bp AGTTTTTGGGAGGAGTCATGCCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGCGGATTTTGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: SFWEESCLLRCQ*AGSPLSGFCRQ
Trigger: TTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAGGCATGACTCCTCCCAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
3UTR TCA 72 bp CTTCTGGGAAACACCCTCCTAGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTTGGTATATGTGCCGAT +
Preference number: 3 (lower is better)
Translates to: LLGNTLLGCSGL*VMRGGLGICAD
Trigger: ATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR GCA 72 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTaGAAGGATGGTGATGCTTTCCTAGAACTTATGCAG +
Preference number: 3 (lower is better)
Translates to: HMPVLRASRTSL*KDGDAFLELMQ
Trigger: CTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 72 bp CTGGAACTTGGAGCTGTAGCCTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTCCGCTTGAAGGATGTA +
Preference number: 3 (lower is better)
Translates to: LELGAVAFRVFP*VIIPNLRLKDV
Trigger: TACATCCTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACCCTGAAGGCTACAGCTCCAAGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGGATCTCCTTCGGTTaGTATTGTCACTCGATAAAT +
Preference number: 3 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSRISFG*YCHSIN
Trigger: ATTTATCGAGTGACAATACAAACCGAAGGAGATCCT...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp CGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGTTCAGTGTTATGCCTTaGGCATTTTCCAAGTATATC +
Preference number: 3 (lower is better)
Translates to: RTGVEWALSRKDSRPSMMFSVMP*AFSKYI
Trigger: GATATACTTGGAAAATGCCAAAGGCATAACACTGAA...CATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR CCA 72 bp ATGACCCTAGGGGGCAGCATTTCTACATCTAAGTGTTaGTCTCTGCCACGGTCACATTCTGTGTTTTGTAGG +
Preference number: 3 (lower is better)
Translates to: MTLGGSISTSKC*SLPRSHSVFCR
Trigger: CCTACAAAACACAGAATGTGACCGTGGCAGAGACCAACACTTAGATGTAGAAATGCTGCCCCCTAGGGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CCA 72 bp CTTTCTTCTTCTGGGAAACACCCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGGAGGACTTGGTATATG +
Preference number: 3 (lower is better)
Translates to: LSSSGKHPPRLQ*TLSHERRTWYM
Trigger: CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCCAGAAGAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CAA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCTCTCTTAACTACACTTaGTCCAACATTTCTGACAGA +
Preference number: 3 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFSLNYT*SNISDR
Trigger: TCTGTCAGAAATGTTGGACAAAGTGTAGTTAAGAGA...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTCTAAGGCTGTTGATCTaGGAATTCTATTTTCTGAAG +
Preference number: 3 (lower is better)
Translates to: ELKSLGLGSHTRPSYACALRLLI*EFYFLK
Trigger: CTTCAGAAAATAGAATTCCAAGATCAACAGCCTTAG...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTTTAGAGTTGAAGAGCTaGGGCCTAGGATCCCACACT +
Preference number: 3 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICLELKS*GLGSHT
Trigger: AGTGTGGGATCCTAGGCCCAAGCTCTTCAACTCTAA...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTGATGAAAACAGGATCTaGTGTGTGATTGGTTTTAGA +
Preference number: 3 (lower is better)
Translates to: HMPVLRASRTSLCKDGDADENRI*CVIGFR
Trigger: TCTAAAACCAATCACACACAAGATCCTGTTTTCATC...AGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTGATGAAAACAGGATCTaGTGTGTGATTGGTTTTAGA +
Preference number: 3 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLDENRI*CVIGFR
Trigger: TCTAAAACCAATCACACACAAGATCCTGTTTTCATC...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp CGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGTTACTCCAGAGCCCTTaGAGAGTGACCAGTTCAAGA +
Preference number: 3 (lower is better)
Translates to: RISRKKAMSRSDSVRMIRLLQSP*RVTSSR
Trigger: TCTTGAACTGGTCACTCTCAAAGGGCTCTGGAGTAA...CCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGTCTCTTAACTACACTTaGTCCAACATTTCTGACAGA +
Preference number: 3 (lower is better)
Translates to: FICLCCVLRGLPSARMVMSLNYT*SNISDR
Trigger: TCTGTCAGAAATGTTGGACAAAGTGTAGTTAAGAGA...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCTCTTAACTACACTTaGTCCAACATTTCTGACAGA +
Preference number: 3 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHSLNYT*SNISDR
Trigger: TCTGTCAGAAATGTTGGACAAAGTGTAGTTAAGAGA...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCGGATCAGTTTCTTTCTaGCATCGTTTAGTTCATCAG +
Preference number: 3 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVGSVSF*HRLVHQ
Trigger: CTGATGAACTAAACGATGCAAGAAAGAAACTGATCC...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATCTAAGGCTGTTGATCTaGGAATTCTATTTTCTGAAG +
Preference number: 3 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHLRLLI*EFYFLK
Trigger: CTTCAGAAAATAGAATTCCAAGATCAACAGCCTTAG...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp TCCCTCTGCAAGGATGGTGATGCTTTCCTAGAACTTATGCAGAGGATGACCCTAAAGTCTACAAGTGACTaGTTCTGTTCTGCGTTTGGG +
Preference number: 3 (lower is better)
Translates to: SLCKDGDAFLELMQRMTLKSTSD*FCSAFG
Trigger: CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTT...TAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGGCTGTGATGGCAGAATaGAGCAGTTGTGACACAGTA +
Preference number: 3 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLAVMAE*SSCDTV
Trigger: TACTGTGTCACAACTGCTCAATTCTGCCATCACAGC...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp CCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCGCATCAGACATCTCTTaGCTGGTTAGTTGTTCAAGC +
Preference number: 3 (lower is better)
Translates to: PIRVSAAALLLCGSRNMSASDIS*LVSCSS
Trigger: GCTTGAACAACTAACCAGCAAAGAGATGTCTGATGC...GGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTGCATCAGACATCTCTTaGCTGGTTAGTTGTTCAAGC +
Preference number: 3 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTASDIS*LVSCSS
Trigger: GCTTGAACAACTAACCAGCAAAGAGATGTCTGATGC...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 3 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR-3UTR CAA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGAAGTCTACAAGTGACTaGTTCTGTTCTGCGTTTGGG +
Preference number: 3 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLKSTSD*FCSAFG
Trigger: CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTT...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTTTAGAGTTGAAGAGCTaGGGCCTAGGATCCCACACT +
Preference number: 3 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSLELKS*GLGSHT
Trigger: AGTGTGGGATCCTAGGCCCAAGCTCTTCAACTCTAA...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGTTTGATCTTGCCCATTaGGCATCAGACATCTCTTTG +
Preference number: 3 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGFDLAH*ASDISL
Trigger: CAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAA...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp ATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCTTTTGATCTGCAGTATCCATTAGACCACTaGAATCTATTTGCAACCTCC +
Preference number: 3 (lower is better)
Translates to: IRCFTEESAMVEIPFDLQYPLDH*NLFATS
Trigger: GGAGGTTGCAAATAGATTCAAGTGGTCTAATGGATA...CTGCAGATCAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR TCA 72 bp AGCCCTCAAGCCCCAGATGACTTAGAAATCTCTCCCTaGGATGAAAACAGGATCTTGTGTGTGATTGGTTTT +
Preference number: 3 (lower is better)
Translates to: SPQAPDDLEISP*DENRILCVIGF
Trigger: AAAACCAATCACACACAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAAGTCATCTGGGGCTTGAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 72 bp GTAGATGACAAGTGGCAGTGGCTAGTTGATTTTAACTaGCCCCTAATCTCTACTAGGATCTCCTTCGGTTTG +
Preference number: 3 (lower is better)
Translates to: VDDKWQWLVDFN*PLISTRISFGL
Trigger: CAAACCGAAGGAGATCCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAGCCACTGCCACTTGTCATCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp TTGACTTCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTTATCCATTAGACCACTaGAATCTATTTGCAACCTCC +
Preference number: 3 (lower is better)
Translates to: LTSPACRRLGSRFHISRGYPLDH*NLFATS
Trigger: GGAGGTTGCAAATAGATTCAAGTGGTCTAATGGATA...ACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp CAACTCGGCCATGTCACTATTTACCTGTATCGGAACCGGCTCCCTTTAAAGAATCCTTCAAATTTCAGCTaGGTCACCTCATTCCATTTA +
Preference number: 3 (lower is better)
Translates to: QLGHVTIYLYRNRLPLKNPSNFS*VTSFHL
Trigger: TAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGG...ATTCTTTAAAGGGAGCCGGTTCCGATACAGGTAAATAGTGACATGGCCGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421674.5
3UTR CCA 72 bp ACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTaGCGTATTATGGCCTGTAGGCTAAATTCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: TGKDQFYCLEQD*RIMACRLNSAH
Trigger: GTGAGCTGAATTTAGCCTACAGGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CCA 72 bp TTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTaGTTAGTTGTTCAAGCACCCTTTAAACAAGCAACC +
Preference number: 3 (lower is better)
Translates to: LILPIWHQTSLC*LVVQAPFKQAT
Trigger: GGTTGCTTGTTTAAAGGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAATTAGCATTCCAGTATTaGATCTTGCCCATTTGGCAT +
Preference number: 3 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKLAFQY*ILPIWH
Trigger: ATGCCAAATGGGCAAGATCAAATACTGGAATGCTAA...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
3UTR CCA 72 bp GAACACAGCCATGTTCCTTCATTTACAAATTATCTGTaGCTGTTTTTGTGCTGTGATGGCAGAATTGAGCAG +
Preference number: 3 (lower is better)
Translates to: EHSHVPSFTNYL*LFLCCDGRIEQ
Trigger: CTGCTCAATTCTGCCATCACAGCACAAAAACAGCCACAGATAATTTGTAAATGAAGGAACATGGCTGTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 72 bp AACATTTCTGACAGAACTATCTATCTCTGGTACCACTaGATTCGTTTAACGCCCCTGGAGCACTATAAAAGT +
Preference number: 3 (lower is better)
Translates to: NISDRTIYLWYH*IRLTPLEHYKS
Trigger: ACTTTTATAGTGCTCCAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATAGATAGTTCTGTCAGAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR GCA 72 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTaGTGGTTAGTTGTTCAAGCACCCTTTAAACAAGCA +
Preference number: 3 (lower is better)
Translates to: YLILPIWHQTSL*WLVVQAPFKQA
Trigger: TGCTTGTTTAAAGGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 72 bp ATCACTCACTGCATAGAAACACCAGATTCTACAAACTaGGGTAGGAGCACTACACTAAAAGGTAATCTTCTA +
Preference number: 3 (lower is better)
Translates to: ITHCIETPDSTN*GRSTTLKGNLL
Trigger: TAGAAGATTACCTTTTAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGGTGTTTCTATGCAGTGAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR GCA 72 bp TTTCCAAGTATATCCATTAGACCACTTGAATCTATTTaGAACCTCCGAAATAAGCAGCAACATAGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: FPSISIRPLESI*NLRNKQQHSSL
Trigger: GAGAGAGCTATGTTGCTGCTTATTTCGGAGGTTGCAAATAGATTCAAGTGGTCTAATGGATATACTTGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR GCA 72 bp AATCTTCAGTATCTCCCAGCTTATCTTTCAGTGTTATaGCTTTGGCATTTTCCAAGTATATCCATTAGACCA +
Preference number: 3 (lower is better)
Translates to: NLQYLPAYLSVL*LWHFPSISIRP
Trigger: TGGTCTAATGGATATACTTGGAAAATGCCAAAGGCATAACACTGAAAGATAAGCTGGGAGATACTGAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR-3UTR CAA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTGGATCAGTTTCTTTCTaGCATCGTTTAGTTCATCAG +
Preference number: 3 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVGSVSF*HRLVHQ
Trigger: CTGATGAACTAAACGATGCAAGAAAGAAACTGATCC...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGATGAAAACAGGATCTaGTGTGTGATTGGTTTTAGA +
Preference number: 3 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLDENRI*CVIGFR
Trigger: TCTAAAACCAATCACACACAAGATCCTGTTTTCATC...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR-3UTR CAA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTCTAAGGCTGTTGATCTaGGAATTCTATTTTCTGAAG +
Preference number: 3 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVLRLLI*EFYFLK
Trigger: CTTCAGAAAATAGAATTCCAAGATCAACAGCCTTAG...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR TCA 72 bp AACCAAAATATTTACTGTGTAGCACTTGACATAAGTTaGTTGACCTCTGGTCCAGATGAAAGGATGTCTTTA +
Preference number: 3 (lower is better)
Translates to: NQNIYCVALDIS*LTSGPDERMSL
Trigger: TAAAGACATCCTTTCATCTGGACCAGAGGTCAATCAACTTATGTCAAGTGCTACACAGTAAATATTTTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: CGSWGRCSALGHGLWRDSGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...GCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGGCTCCGGCGCTGCGGACCCTaGACCAGGCGTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GGTAPAGNHPCSVYFRWLRRCGP*TRRPSA
Trigger: GGCTGAGGGACGCCTGGTCCAGGGTCCGCAGCGCCG...GAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGCCTGGCCTGCCCTGCTaGGGCTGCAGTGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWPGLPC*GCSDES
Trigger: AGACTCATCACTGCAGCCTCAGCAGGGCAGGCCAGG...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGCAAACCATCGCCTGTTCCTCCTCGGGCCCGCTGTGCCCCTGACACAGGGCCCGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GKPSPVPPRARCAPDTGPDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...GGGCCCTGTGTCAGGGGCACAGCGGGCCCGAGGAGGAACAGGCGATGGTTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR CCA 90 bp GCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALGHGLWRDSSGWEPSLLLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...GAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCCTGGCCTGCCCTGCTaGGGCTGCAGTGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFPGLPC*GCSDES
Trigger: AGACTCATCACTGCAGCCTCAGCAGGGCAGGCCAGG...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCCGCGCTCCAGGCTCCTaGTGCTGCCGCTCATCAACC +
Preference number: 4 (lower is better)
Translates to: VAPLICRESNISSRLCSARAPGS*CCRSST
Trigger: GGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCG...GGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp CATGATGGAGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTCCAGCAGCCGCACGGTaGAGCTGTACTCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: HDGDVNSSSAGPGDAAQPPAAAR*SCTRAP
Trigger: TGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGG...AGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCCCAGCAGCCGCACGGTaGAGCTGTACTCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: VAPLICRESNISSRLCSAPAAAR*SCTRAP
Trigger: TGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGG...GGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTTCTCACGGCGCTGCGGACCCTaGACCAGGCGTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PRLQSQLLAHCYLSGCFSRRCGP*TRRPSA
Trigger: GGCTGAGGGACGCCTGGTCCAGGGTCCGCAGCGCCG...TGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR CCA 90 bp AGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLGPWVMEGQLRLGTIPADAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...AGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCCTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSLFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWRTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GSWGRCSALGHGLWRDSSSMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...GGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTCCTGGCCTGCCCTGCTaGGGCTGCAGTGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVPGLPC*GCSDES
Trigger: AGACTCATCACTGCAGCCTCAGCAGGGCAGGCCAGG...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGGGCTCCAGGCTCCTGCTaGTGCCGCTCATCAACCTGC +
Preference number: 4 (lower is better)
Translates to: YGGTAPAGNHPCSVYFRWAPGSC*CRSSTC
Trigger: GCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGC...CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp AGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RCEQLFCGSWGRCSALGHCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...ATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCCAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CGSWGRCSALGHGLWRDSQLLAH*YLSGCF
Trigger: GAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTG...GCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGTATGCCTGTGCTGCGTaGTTCGAGGACTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWYACAA*FEDFPL
Trigger: CAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATA...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GGCAAACCATCGCCTGTTCCTCCTCGGGCCCGCTGTGCCCCTGACACAGGGCCCTCTGTGTATTTCCGGTaGCTCCCGTTTGATCTTAGC +
Preference number: 4 (lower is better)
Translates to: GKPSPVPPRARCAPDTGPSVYFR*LPFDLS
Trigger: GCTAAGATCAAACGGGAGCCACCGGAAATACACAGA...GGGCCCTGTGTCAGGGGCACAGCGGGCCCGAGGAGGAACAGGCGATGGTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR CCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGCTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRLFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTGCCGTTGCCTCCTGCTaGCCTCGTTCCTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: AARCLQGCRPRLQSQLLAAVASC*PRSSSL
Trigger: TAAGGAGGAGGAACGAGGCCAGCAGGAGGCAACGGC...AGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR TCA 90 bp GCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: ALGHGLWRDSSGWEPSLLGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...GAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCCCCGTCGCTGCCGTTaGCTCCTGCTGGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: CLQGCRPRLQSQLLAHCYPRRCR*LLLASF
Trigger: GAACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGG...ATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR GCA 90 bp TGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCAGCTCCAGGCTCCTGCTaGTGCCGCTCATCAACCTGC +
Preference number: 4 (lower is better)
Translates to: WNALVWNGHCPVRTLGLPAPGSC*CRSSTC
Trigger: GCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGC...TGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp GGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATGCGCGCTCCAGGCTCCTaGTGCTGCCGCTCATCAACC +
Preference number: 4 (lower is better)
Translates to: GVEWALSRKDSRPSMMEMRAPGS*CCRSST
Trigger: GGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCG...CATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTCCAGCAGCCGCACGGTaGAGCTGTACTCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: ELKSLGLGSHTRPSYACAPAAAR*SCTRAP
Trigger: TGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGG...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: GKWNALVWNGHCPVRTLGCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...GCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TGGAGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WRCEQLFCGSWGRCSALGCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...GCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp CAGGGGTGGGCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: QGWAARCLQGCRPRLQSQVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...CTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLIRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRRDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLWRDSSGWEPSLLCVFPRDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...CGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: ARCLQGCRPRLQSQLLAHDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...ATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCACACTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: APLICRESNISSRLCSATLFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...TGTGGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: LSLGPWVMEGQLRLGTIPWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...AGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCCAAAGAGGAGTCCCATaGTCACAAGGAGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: CGSWGRCSALGHGLWRDSQRGVP*SQGANG
Trigger: TCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTTG...GCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
3UTR CAA 72 bp CAGGTGTCAATGAGCAGGCTCACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTGTTCCTCCTCGGGCCC +
Preference number: 4 (lower is better)
Translates to: QVSMSRLTTERI*QANHRLFLLGP
Trigger: GGGCCCGAGGAGGAACAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR TCA 90 bp ACCACTGAGCGGATTTTGCAGGCAAACCATCGCCTGTTCCTCCTCGGGCCCGCTTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: TTERILQANHRLFLLGPACRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...AGCGGGCCCGAGGAGGAACAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR TCA 90 bp TGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCAGGCAAACCATCGCCTaGGGGGACAAAAGTATTGAT +
Preference number: 4 (lower is better)
Translates to: CGSWGRCSALGHGLWRDSRQTIA*GDKSID
Trigger: ATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCT...GCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSEQAHH*ADFAGK
Trigger: TTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTC...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLEQAHH*ADFAGK
Trigger: TTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTC...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFLLRCQ*AGSPLS
Trigger: GCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAG...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATCCTGGCCTGCCCTGCTaGGGCTGCAGTGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNPGLPC*GCSDES
Trigger: AGACTCATCACTGCAGCCTCAGCAGGGCAGGCCAGG...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCCAGCAGCCGCACGGTaGAGCTGTACTCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: FICLCCVLRGLPSARMVMPAAAR*SCTRAP
Trigger: TGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGG...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp CAGGGGTGGGCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: QGWAARCLQGCRPRLQSQQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...CTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: HMPVLRASRTSLCKDGDARDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...AGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 4 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTCCTTTGGCATCTCTCTaGATGGTGCAGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: LSLGPWVMEGQLRLGTIPPLASL*MVQVYS
Trigger: CGAGTACACCTGCACCATCCAGAGAGATGCCAAAGG...AGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCCTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLNAAGGSIDLPGKQHQLLFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...GAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKRTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: GKWNALVWNGHCPVRTLGRTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...GCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: RCEQLFCGSWGRCSALGHRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...ATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ALGHGLWRDSSGWEPSLLVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...GAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCTACTGGAACCCAGTaGCACCAGCAGGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWSTGTQ*HQQEKL
Trigger: GAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGA...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CAGGGGTGGGCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGAAATGCAGCATTTCCTaGCACGTCCTTACATGGGTG +
Preference number: 4 (lower is better)
Translates to: QGWAARCLQGCRPRLQSQKCSIS*HVLTWV
Trigger: CACCCATGTAAGGACGTGTCAGGAAATGCTGCATTT...CTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGCCCACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS-3UTR TCA 90 bp GCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: AICPAASHVRQEGVPMGSLLRCQ*AGSPLS
Trigger: GCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAG...ACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTCCCCGTCGCTGCCGTTaGCTCCTGCTGGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLPRRCR*LLLASF
Trigger: GAACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGG...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATTGCCGCTCATCAACCTaGTCAGCATCTTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHCRSST*SASSRP
Trigger: CGGGCGGGAAGATGCTGAGCAGGTTGATGAGCGGCA...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCCGCGCTCCAGGCTCCTaGTGCTGCCGCTCATCAACC +
Preference number: 4 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVRAPGS*CCRSST
Trigger: GGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCG...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACACGCGCTCCAGGCTCCTaGTGCTGCCGCTCATCAACC +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTRAPGS*CCRSST
Trigger: GGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCG...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000421674.5
CDS-3UTR GCA 90 bp GATGGAGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGCATCTCTCTGGATGGTaGAGGTGTACTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: DGDVNSSSAGPGDAAQPWHLSGW*RCTRCR
Trigger: ACGACAGCGAGTACACCTGCACCATCCAGAGAGATG...CCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: AARCLQGCRPRLQSQLLACCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...AGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATGTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: GVEWALSRKDSRPSMMEMCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...CATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCCAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSQLLAH*YLSGCF
Trigger: GAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTG...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTCCCTTCATATGCCTGTaGTGCGTGCTTCGAGGACTT +
Preference number: 4 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLPFICL*CVLRGL
Trigger: AAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGG...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCCGGCGCTGCGGACCCTaGACCAGGCGTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPRRCGP*TRRPSA
Trigger: GGCTGAGGGACGCCTGGTCCAGGGTCCGCAGCGCCG...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCCTTTGGCATCTCTCTaGATGGTGCAGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFPLASL*MVQVYS
Trigger: CGAGTACACCTGCACCATCCAGAGAGATGCCAAAGG...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWEAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AARCLQGCRPRLQSQLLADTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...AGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWRINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DSFSSSMLQVAPLICRESRDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...GCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLRDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HMPVLRASRTSLCKDGDARDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...AGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPILFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: VERTGVEWALSRKDSRPSRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...GGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: AARCLQGCRPRLQSQLLAHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...AGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTCCCATTGCTGGGAATaGGTAGCCGGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKSHCWE*VAGFLG
Trigger: ACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGA...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: EEDLVYVPMVPRWVPLLGDGSHC*EWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATC...TCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGCCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RTGVEWALSRKDSRPSMMPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...CATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTTCTACTGGAACCCAGTaGCACCAGCAGGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: AARCLQGCRPRLQSQLLASTGTQ*HQQEKL
Trigger: GAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGA...AGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR CAA 72 bp TTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACC +
Preference number: 4 (lower is better)
Translates to: LVYVPMVPRWVP*LGMGSRVPWST
Trigger: GGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGAAATGCAGCATTTCCTaGCACGTCCTTACATGGGTG +
Preference number: 4 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWKCSIS*HVLTWV
Trigger: CACCCATGTAAGGACGTGTCAGGAAATGCTGCATTT...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000484674.5
CDS-3UTR TCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFTLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: AVCRAVGLVCNHSYSLIACRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...AGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTGACTTACCCCACCCCTaGTGCTGCTGTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLDLPHP*CCCCCS
Trigger: GCTACAGCAACAGCAGCATCAGGGGTGGGGTAAGTC...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLIEQAHH*ADFAGK
Trigger: TTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTC...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACACCTGGCCTGCCCTGCTaGGGCTGCAGTGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTPGLPC*GCSDES
Trigger: AGACTCATCACTGCAGCCTCAGCAGGGCAGGCCAGG...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTCCACTTCCACATAGATaGGCAGAGCCTGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLIPLPHR*AEPGAS
Trigger: AGAAGCCCCAGGCTCTGCTCATCTATGTGGAAGTGG...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458630.5
CDS-3UTR GCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCTCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFSSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 4 (lower is better)
Translates to: LLSLGPWVMEGQLRLGTIFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...GATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: VMEGQLRLGTIPALCISGAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...ACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: EEDLVYVPMVPRWVPLLGAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...TCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp AGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: SWGAGFRFLLLLNAAGGSAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...GGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTATGCCTGTGCTGCGTaGTTCGAGGACTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSYACAA*FEDFPL
Trigger: CAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATA...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CATGATGGAGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTCCTTTGGCATCTCTCTaGATGGTGCAGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: HDGDVNSSSAGPGDAAQPPLASL*MVQVYS
Trigger: CGAGTACACCTGCACCATCCAGAGAGATGCCAAAGG...AGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGATGGTGAATGGAGGCTaGGATCTCAATTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWMVNGG*DLNCFT
Trigger: GGTGAAACAATTGAGATCCCAGCCTCCATTCACCAT...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWRINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCTGTGTATTTCCGGTaGCTCCCGTTTGATCTTAGC +
Preference number: 4 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWSVYFR*LPFDLS
Trigger: GCTAAGATCAAACGGGAGCCACCGGAAATACACAGA...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: RVPWSTWLVFGRSHAFSGRTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
CDS-3UTR CCA 90 bp GCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ARCLQGCRPRLQSQLLAHCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...ATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCAGACATCTCTTTGCTaGTTAGTTGTTCAAGCACCC +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWQTSLC*LVVQAP
Trigger: GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTG...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCACCTGGCTAGTTTTTaGGAGGAGTCATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFHLASF*EESCLL
Trigger: GAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTG...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: VERTGVEWALSRKDSRPSGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...GGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GKWNALVWNGHCPVRTLGGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...GCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGTCTACTGGAACCCAGTaGCACCAGCAGGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRSTGTQ*HQQEKL
Trigger: GAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGA...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CATGATGGAGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: HDGDVNSSSAGPGDAAQPCADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...AGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSSMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHCRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGACTTACCCCACCCCTaGTGCTGCTGTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLDLPHP*CCCCCS
Trigger: GCTACAGCAACAGCAGCATCAGGGGTGGGGTAAGTC...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCAGGCAAACCATCGCCTaGGGGGACAAAAGTATTGAT +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSRQTIA*GDKSID
Trigger: ATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCT...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGLLRCQ*AGSPLS
Trigger: GCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAG...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLLLRCQ*AGSPLS
Trigger: GCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAG...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNLLRCQ*AGSPLS
Trigger: GCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAG...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 4 (lower is better)
Translates to: FCGSWGRCSALGHGLWRDEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...GTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCGTCCCCTCTGCTAGGTaGTACTACTGCAATAATCAG +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSVPSAR*YYCNNQ
Trigger: CTGATTATTGCAGTAGTATCACCTAGCAGAGGGGAC...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSCCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTTCTGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: GLVCNHSYSLIAICPAASAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...AGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: VGLVCNHSYSLIAICPAAAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...AGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGGGGTCCTGGGGACGCTaGTCAGCCTTGGGCCATGGG +
Preference number: 4 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGGSWGR*SALGHG
Trigger: CCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCC...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGCAGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: SSWGAGFRFLLLLNAAGGVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...GCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGGGTGGTCCCTTCAGATaGCCACTCTGTTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: FICLCCVLRGLPSARMVMGGPFR*PLCSSS
Trigger: CGAGGAGGAACAGAGTGGGCATCTGAAGGGACCACC...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402883.5
CDS-3UTR GCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTCACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGHSPFI*LCCVLR
Trigger: TCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTG...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCCCACTTGAATCTATTTaGAACCTCCGAAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: CGSWGRCSALGHGLWRDSPLESI*NLRNKQ
Trigger: CTGCTTATTTCGGAGGTTGCAAATAGATTCAAGTGG...GCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTAGCCTGGGGCTTCTATaGCTGATCCAACAGCACCAC +
Preference number: 4 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSISLGLL*LIQQHH
Trigger: GTGGTGCTGTTGGATCAGGCATAGAAGCCCCAGGCT...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458630.5
CDS-3UTR GCA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCAGCCTGGGGCTTCTATaGCTGATCCAACAGCACCAC +
Preference number: 4 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFSLGLL*LIQQHH
Trigger: GTGGTGCTGTTGGATCAGGCATAGAAGCCCCAGGCT...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR CCA 90 bp TATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGGATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: YGGTAPAGNHPCSVYFRWMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CTAACAAGGCAGCATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: LTRQHPMFYRGVGHGRDPDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...GGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIARTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFRTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSIWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RTGVEWALSRKDSRPSMMCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...CATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AGCAGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSWGAGFRFLLLLNAAGGCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...GCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCGTTCTGTTCTGCGTTTaGGGCTGTCCAATTAGGGTA +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSVLFCV*GCPIRV
Trigger: TACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGTTGATCTTGCCCATTTaGCATCAGACATCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWLILPI*HQTSLC
Trigger: GCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAA...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGGCCGTTGCCTCCTGCTaGCCTCGTTCCTCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWAVASC*PRSSSL
Trigger: TAAGGAGGAGGAACGAGGCCAGCAGGAGGCAACGGC...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000451277.5
CDS-3UTR CCA 90 bp TATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGGTCAAACTCGGGGGTCTaGCGGATATCACGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: YGGTAPAGNHPCSVYFRWSNSGV*RISRKK
Trigger: CTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA...CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTCACCTGGCTAGTTTTTaGGAGGAGTCATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVHLASF*EESCLL
Trigger: GAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTG...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCACCTGGCTAGTTTTTaGGAGGAGTCATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GKWNALVWNGHCPVRTLGHLASF*EESCLL
Trigger: GAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTG...GCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGCACCTGGCTAGTTTTTaGGAGGAGTCATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLWRDSSGWEPSLLCVFPHLASF*EESCLL
Trigger: GAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTG...CGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATGTCCCATTGCTGGGAATaGGTAGCCGGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GVEWALSRKDSRPSMMEMSHCWE*VAGFLG
Trigger: ACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGA...CATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCTCCCATTGCTGGGAATaGGTAGCCGGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: DSFSSSMLQVAPLICRESSHCWE*VAGFLG
Trigger: ACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGA...GCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLDGSHC*EWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATC...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIADGSHC*EWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATC...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTCCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIAPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCTCCCTTGGGTGCCTCTaGATTCCAGGCCTCTTACAG +
Preference number: 4 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSSLGCL*IPGLLQ
Trigger: CTGTAAGAGGCCTGGAATCCAGAGGCACCCAAGGGA...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484674.5
3UTR CAA 72 bp GATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAACATCAGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DSFSSSMLQVAP*ICRESNISSRL
Trigger: CAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp CTGCTCAGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: LLSLGPWVMEGQLRLGTIGRDPF*SAGRLN
Trigger: ATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACC...GATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: GKWNALVWNGHCPVRTLGFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...GCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGGCTCCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: GGTAPAGNHPCSVYFRWLPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...GAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp TGGAGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WRCEQLFCGSWGRCSALGLSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...GCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTGGCTCCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GGTAPAGNHPCSVYFRWLLSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...GAGCCACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCACGTCCTTACATGGGTaGGGATCCACTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: GKWNALVWNGHCPVRTLGTSLHG*GSTPYV
Trigger: AACATATGGAGTGGATCCTCACCCATGTAAGGACGT...GCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS-3UTR TCA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALCADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: WNALVWNGHCPVRTLGLPCADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...TGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTTCTTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GLVCNHSYSLIAICPAASSMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...AGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTCCCTCAAGCCCCAGATaGCTTAGAAATCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLPSSPR*LRNLSL
Trigger: CAGGGAGAGATTTCTAAGTCATCTGGGGCTTGAGGG...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: HGKWNALVWNGHCPVRTLGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...TAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCAAGAAAAGACGCTTCTaGTTAGTTACTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSKKRRF*LVTPEP
Trigger: GGGCTCTGGAGTAACTAATCAGAAGCGTCTTTTCTT...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCCAGGCTCCTGCTGCTaGCGCTCATCAACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFPGSCC*RSSTCS
Trigger: TGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGG...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp CCTGCTCTGTGTATTTCCGGTGGCTCCCGTTTGATCTTAGCACTTGATTCCATGCCAGGCTCCTGCTGCTaGCGCTCATCAACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PALCISGGSRLILALDSMPGSCC*RSSTCS
Trigger: TGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGG...CATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGCCAGCAGCCGCACGGTaGAGCTGTACTCGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGPAAAR*SCTRAP
Trigger: TGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGG...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCCATCTCTCTGGATGGTaGAGGTGTACTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: DSFSSSMLQVAPLICRESHLSGW*RCTRCR
Trigger: ACGACAGCGAGTACACCTGCACCATCCAGAGAGATG...GCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp AGCAGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: SSWGAGFRFLLLLNAAGGSSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...GCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCTCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: WVMEGQLRLGTIPALCISSSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...GGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp AAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTCCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: KVSPWEVERTGVEWALSRPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...ACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFCCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIACYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: RVPWSTWLVFGRSHAFSGVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
CDS-3UTR GCA 90 bp CTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: LLLNAAGGSIDLPGKQHQVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...CTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTTATGCCTGTGCTGCGTaGTTCGAGGACTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFYACAA*FEDFPL
Trigger: CAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATA...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATTTCATATGCCTGTGCTaGGTGCTTCGAGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNFICLC*VLRGLP
Trigger: GGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTCCCTTCATATGCCTGTaGTGCGTGCTTCGAGGACTT +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGPFICL*CVLRGL
Trigger: AAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGG...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTCACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFHSPFI*LCCVLR
Trigger: TCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTG...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ACRRLGSRFHISRGAYTLRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...AAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATCGCGATGGGTCCCATTaGTGGGAATGGGTAGCCGGG +
Preference number: 4 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDRDGSH*WEWVAG
Trigger: CCCGGCTACCCATTCCCAGCAATGGGACCCATCGCG...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTAGAAGTCCACTCTGTTaGGACTGCACTGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLRSPLC*DCTGYF
Trigger: GAAATAACCAGTGCAGTCGCAACAGAGTGGACTTCT...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATCCACTGAGCGGATTTTaGAGGCAAACCATCGCCTGT +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNPLSGF*RQTIAC
Trigger: ACAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGG...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR GCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTAATTCCCTTGGGTaGCTCTGGATTCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIANSLG*LWIPGL
Trigger: GAGGCCTGGAATCCAGAGGCACCCAAGGGAATTAGC...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR CCA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTCCTTTGGCATCTCTCTaGATGGTGCAGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: ELKSLGLGSHTRPSYACAPLASL*MVQVYS
Trigger: CGAGTACACCTGCACCATCCAGAGAGATGCCAAAGG...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLIMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTATGGTGAATGGAGGCTaGGATCTCAATTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLMVNGG*DLNCFT
Trigger: GGTGAAACAATTGAGATCCCAGCCTCCATTCACCAT...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSREAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLNAAGGSIDLPGKQHQLDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...GAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQLFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: RVPWSTWLVFGRSHAFSGHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
CDS-3UTR CCA 90 bp TGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCCACCTGGCTAGTTTTTaGGAGGAGTCATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WVMEGQLRLGTIPALCISHLASF*EESCLL
Trigger: GAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTG...GGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCCCATTGCTGGGAATaGGTAGCCGGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHSHCWE*VAGFLG
Trigger: ACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGA...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMDGSHC*EWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATC...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGCCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACACCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTTCTTGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLVCNHSYSLIAICPAASWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...AGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCCCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATCCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTCAAGCCCCAAATCGCTaGGACTTGTTGCTAAATCTT +
Preference number: 4 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLQAPNR*DLLLNL
Trigger: AAGATTTAGCAACAAGTCCCAGCGATTTGGGGCTTG...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR TCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTCAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HAVCRAVGLVCNHSYSLIQTQKE*RPEMQH
Trigger: ATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTG...AATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR TCA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: ELKSLGLGSHTRPSYACACADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPISMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMCRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACATGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTCRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTATGAAAGGTCAGAGTTaGGGCTATCACTCACTGCAT +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVMKGQS*GYHSLH
Trigger: ATGCAGTGAGTGATAGCCTCAACTCTGACCTTTCAT...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMEQAHH*ADFAGK
Trigger: TTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTC...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWEQAHH*ADFAGK
Trigger: TTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTC...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGTGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLWRDSSGWEPSLLCVFPCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...CGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAGTCCCCTCTGCTAGGTaGTACTACTGCAATAATCAG +
Preference number: 4 (lower is better)
Translates to: EEDLVYVPMVPRWVPLLGVPSAR*YYCNNQ
Trigger: CTGATTATTGCAGTAGTATCACCTAGCAGAGGGGAC...TCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTGTCCCCTCTGCTAGGTaGTACTACTGCAATAATCAG +
Preference number: 4 (lower is better)
Translates to: AVCRAVGLVCNHSYSLIAVPSAR*YYCNNQ
Trigger: CTGATTATTGCAGTAGTATCACCTAGCAGAGGGGAC...AGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR GCA 90 bp ATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGGAGCCAGGCTCCTGCTGCTaGCGCTCATCAACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ITEKGNVKVRLGKDDQEEPGSCC*RSSTCS
Trigger: TGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGG...CTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS-3UTR GCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGGCTCCAGGCTCCTGCTaGTGCCGCTCATCAACCTGC +
Preference number: 4 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGAPGSC*CRSSTC
Trigger: GCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGC...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: FICLCCVLRGLPSARMVMCCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHCCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPICCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TCAAACTCGGGGGTCTGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SNSGVWRISRKKAMSRSDCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...GTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACATGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTCAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIAQLLAH*YLSGCF
Trigger: GAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTG...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIAVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTGGTGGTCCCTTCAGATaGCCACTCTGCTCAGATTTG +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFGGPFR*PLCSDL
Trigger: CAAATCTGAGCAGAGTGGGCATCTGAAGGGACCACC...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GCAGCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCCACTCTGTTGCGACTaGACTGGTTATTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AARCLQGCRPRLQSQLLAPLCCD*TGYFFF
Trigger: AAAGAAGAAATAACCAGTGCAGTCGCAACAGAGTGG...AGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTCGGCGCTGCGGACCCTaGACCAGGCGTCCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCRRCGP*TRRPSA
Trigger: GGCTGAGGGACGCCTGGTCCAGGGTCCGCAGCGCCG...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCCTTTGGCATCTCTCTaGATGGTGCAGGTGTACTCG +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIPLASL*MVQVYS
Trigger: CGAGTACACCTGCACCATCCAGAGAGATGCCAAAGG...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: ELKSLGLGSHTRPSYACAMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GCTCCATTGATCTGCCGGGAAAGCAACATCAGCTCCAGGCTGTGCTCAGCCACAGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: APLICRESNISSRLCSATEAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...TGTGGCTGAGCACAGCCTGGAGCTGATGTTGCTTTCCCGGCAGATCAATGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: EEDLVYVPMVPRWVPLLGRINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...TCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: VEGLVLDSTFPEVLTRFRLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...CCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TCCCTCTGCAAGGATGGTGATGCTTTCCTAGAACTTATGCAGAGGATGACCCTAGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLCKDGDAFLELMQRMTLDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...TAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIAGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AAGCTGCTAACAAGGCAGCATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGACCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: KLLTRQHPMFYRGVGHGRPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...TCTACCATGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTTCTACTGGAACCCAGTaGCACCAGCAGGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFSTGTQ*HQQEKL
Trigger: GAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGA...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCCTGTTGCGACTGCACTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSLLRLH*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGTGCAGTCGCAACAG...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
3UTR CAA 72 bp CAGGTGTCAATGAGCAGGCTCACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTGAGGGGACAAAAGTAT +
Preference number: 4 (lower is better)
Translates to: QVSMSRLTTERI*QANHRLRGQKY
Trigger: ATACTTTTGTCCCCTCAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTCATTGACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTAAATGCAGCATTTCCTaGCACGTCCTTACATGGGTG +
Preference number: 4 (lower is better)
Translates to: HMPVLRASRTSLCKDGDAKCSIS*HVLTWV
Trigger: CACCCATGTAAGGACGTGTCAGGAAATGCTGCATTT...AGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR TCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCCAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLQTQKE*RPEMQH
Trigger: ATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTG...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000484674.5
CDS-3UTR TCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIACADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACATCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTSMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHTLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLTLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACACCCTCAAGCCCCAGATaGCTTAGAAATCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTPSSPR*LRNLSL
Trigger: CAGGGAGAGATTTCTAAGTCATCTGGGGCTTGAGGG...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTCCTTTGCTATGTAGATaGCAAGTGGCAGTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLPLLCR*QVAVAS
Trigger: ACTAGCCACTGCCACTTGTCATCTACATAGCAAAGG...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTCCTTTGCTATGTAGATaGCAAGTGGCAGTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: HMPVLRASRTSLCKDGDAPLLCR*QVAVAS
Trigger: ACTAGCCACTGCCACTTGTCATCTACATAGCAAAGG...AGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATCCTTTGCTATGTAGATaGCAAGTGGCAGTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHPLLCR*QVAVAS
Trigger: ACTAGCCACTGCCACTTGTCATCTACATAGCAAAGG...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTAGGCAAACCATCGCCTaGGGGGACAAAAGTATTGAT +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLRQTIA*GDKSID
Trigger: ATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCT...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTTCTCAGGTGTCAATaGGCAGGCTCACCACTGAGC +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPLLRCQ*AGSPLS
Trigger: GCTCAGTGGTGAGCCTGCTCATTGACACCTGAGAAG...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGATGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EEDLVYVPMVPRWVPLLGCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...TCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 4 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCGTCCCCTCTGCTAGGTaGTACTACTGCAATAATCAG +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLVPSAR*YYCNNQ
Trigger: CTGATTATTGCAGTAGTATCACCTAGCAGAGGGGAC...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCAAGAAAAGACGCTTCTaGTTAGTTACTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SWGAGFRFLLLLNAAGGSKKRRF*LVTPEP
Trigger: GGGCTCTGGAGTAACTAATCAGAAGCGTCTTTTCTT...GGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp TCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCAACGGAAGACTAAATACCTaGTCCAACAGCACCACAGAG +
Preference number: 4 (lower is better)
Translates to: SFSSSMLQVAPLICRESNGRLNT*SNSTTE
Trigger: CTCTGTGGTGCTGTTGGATCAGGTATTTAGTCTTCC...GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS-3UTR TCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGTGGGGCTTCTATGCCTaGTCCAACAGCACCACAGAG +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLWGFYA*SNSTTE
Trigger: CTCTGTGGTGCTGTTGGATCAGGCATAGAAGCCCCA...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458630.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCCACTTCCACATAGATaGGCAGAGCCTGGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLPLPHR*AEPGAS
Trigger: AGAAGCCCCAGGCTCTGCTCATCTATGTGGAAGTGG...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000458630.5
ENST00000618556.4
CDS-3UTR GCA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCCCAGGCTCCTGCTGCTaGCGCTCATCAACCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPPGSCC*RSSTCS
Trigger: TGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGG...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTATCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLSSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTCCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VGLVCNHSYSLIAICPAAPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...AGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTCCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TCAAACTCGGGGGTCTGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: SNSGVWRISRKKAMSRSDCCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...GTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR GCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCCCCTTCATATGCCTGTaGTGCGTGCTTCGAGGACTT +
Preference number: 4 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVPFICL*CVLRGL
Trigger: AAGTCCTCGAAGCACGCAGCACAGGCATATGAAGGG...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCCTGTGGCTGTTTTTGTaGTGTGATGGCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSLWLFL*CDGRIE
Trigger: CTCAATTCTGCCATCACAGCACAAAAACAGCCACAG...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTGAGGCTATCACTCACTaGATAGAAACACCAGATTCT +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVEAITH*IETPDS
Trigger: AGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTC...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCGGTGGTCCCTTCAGATaGCCACTCTGCTCAGATTTG +
Preference number: 4 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVGGPFR*PLCSDL
Trigger: CAAATCTGAGCAGAGTGGGCATCTGAAGGGACCACC...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGGAAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCCACTCTGTTGCGACTaGACTGGTTATTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RKVSPWEVERTGVEWALSPLCCD*TGYFFF
Trigger: AAAGAAGAAATAACCAGTGCAGTCGCAACAGAGTGG...GGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR GCA 90 bp AGCAGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCAGAAGTCCACTCTGTTaGGACTGCACTGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: SSWGAGFRFLLLLNAAGGRSPLC*DCTGYF
Trigger: GAAATAACCAGTGCAGTCGCAACAGAGTGGACTTCT...GCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGTGAATGGAGGCTaGGATCTCAATTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: EEDLVYVPMVPRWVPLLGMVNGG*DLNCFT
Trigger: GGTGAAACAATTGAGATCCCAGCCTCCATTCACCAT...TCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSIEAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp ACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: TQWHQQEKLLQNTEDSSSEAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...AGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGGGAAGACTAAATACCTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWGRLNT*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCC...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR CCA 90 bp GCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCGGAAGACTAAATACCTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ALGHGLWRDSSGWEPSLLGRLNT*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCC...GAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR CCA 90 bp CGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTTCTGTGTATTTCCGGTaGCTCCCGTTTGATCTTAGC +
Preference number: 4 (lower is better)
Translates to: RVPWSTWLVFGRSHAFSGSVYFR*LPFDLS
Trigger: GCTAAGATCAAACGGGAGCCACCGGAAATACACAGA...ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
CDS-3UTR CCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTCTGTGTATTTCCGGTaGCTCCCGTTTGATCTTAGC +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWSVYFR*LPFDLS
Trigger: GCTAAGATCAAACGGGAGCCACCGGAAATACACAGA...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAACTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: VLDSTFPEVLTRFRSWSKLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...TTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCCAGACATCTCTTTGCTaGTTAGTTGTTCAAGCACCC +
Preference number: 4 (lower is better)
Translates to: GTQWHQQEKLLQNTEDSSQTSLC*LVVQAP
Trigger: GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTG...GCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCAAAGAGGAGTCCCATaGTCACAAGGAGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIQRGVP*SQGANG
Trigger: TCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTTG...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTACAAAGAGGAGTCCCATaGTCACAAGGAGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLQRGVP*SQGANG
Trigger: TCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTTG...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIAVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATTCCCATTGCTGGGAATaGGTAGCCGGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYSHCWE*VAGFLG
Trigger: ACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGA...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGTGTTTCCCTGAGTCATAATCCCCAATCTCCGCTTGAAGGATGTAAGCTGCTAGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: GVSLSHNPQSPLEGCKLLDGSHC*EWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATC...TAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGATCTGCCGGGAAAGCCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 4 (lower is better)
Translates to: DSFSSSMLQVAPLICRESHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...GCTTTCCCGGCAGATCAATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGCCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTCTACTGGAACCCAGTaGCACCAGCAGGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWSTGTQ*HQQEKL
Trigger: GAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGA...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGCTGTTGCGACTGCACTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRLLRLH*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGTGCAGTCGCAACAG...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCGTCGCCGATTCTTCCTaGCCACTTCCAAGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFVADSS*PLPSPK
Trigger: TTTGGGGCTTGGAAGTGGCCAGGAAGAATCGGCGAC...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR TCA 90 bp CGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: RTGVEWALSRKDSRPSMMPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...CATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAACGTCCTTACATGGGTaGGGATCCACTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLTSLHG*GSTPYV
Trigger: AACATATGGAGTGGATCCTCACCCATGTAAGGACGT...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000484674.5
CDS-3UTR TCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTACAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLQTQKE*RPEMQH
Trigger: ATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTG...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000484674.5
CDS-3UTR TCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIQTQKE*RPEMQH
Trigger: ATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTG...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR TCA 90 bp CTAACAAGGCAGCATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: LTRQHPMFYRGVGHGRDPCADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...GGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTATATCTCTGGTACCACTaGATTCGTTTAACGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLYLWYH*IRLTPL
Trigger: CAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATA...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTCTAGTTGATTTTAACTaGCCCCTAATCTCTACTAGG +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVLVDFN*PLISTR
Trigger: CCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAG...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTATGAAAGGTCAGAGTTaGGGCTATCACTCACTGCAT +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLMKGQS*GYHSLH
Trigger: ATGCAGTGAGTGATAGCCTCAACTCTGACCTTTCAT...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: WRISRKKAMSRSDSVRMIEQAHH*ADFAGK
Trigger: TTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTC...GATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCTGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 4 (lower is better)
Translates to: RTGVEWALSRKDSRPSMMEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...CATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGAAATGCAGCATTTCCTaGCACGTCCTCAGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWKCSIS*HVLSSV
Trigger: GACGGAACTGAGGACGTGTCAGGAAATGCTGCATTT...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR TCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTCATTCCTTACATGGGTaGGGATCCACTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGHSLHG*GSTPYV
Trigger: AACATATGGAGTGGATCCTCACCCATGTAAGGAATG...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000458630.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTCCCCGTCGCTGCCGTTaGCTCCTGCTGGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCPRRCR*LLLASF
Trigger: GAACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGG...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATTCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHSSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMSSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TCAAACTCGGGGGTCTGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: SNSGVWRISRKKAMSRSDQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...GTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRRSLLI*RKTKYL
Trigger: CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR GCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTACCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATTGCTGCTGGACACTGTaGGGACTTGGCTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYCCWTL*GLGLTS
Trigger: AGAAGTCAAGCCAAGTCCGCACAGTGTCCAGCAGCA...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 4 (lower is better)
Translates to: VMRGGLGICADGSAMGPIFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAAGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TCCCTCTGCAAGGATGGTGATGCTTTCCTAGAACTTATGCAGAGGATGACCCTATGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLCKDGDAFLELMQRMTLCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...TAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATCAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYQLLAH*YLSGCF
Trigger: GAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTG...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTCATATGCCTGTGCTaGGTGCTTCGAGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLFICLC*VLRGLP
Trigger: GGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGAAGTCCACTCTGTTaGGACTGCACTGGTTATTTC +
Preference number: 4 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSRSPLC*DCTGYF
Trigger: GAAATAACCAGTGCAGTCGCAACAGAGTGGACTTCT...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: WNALVWNGHCPVRTLGLPSSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...TGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTATGGTGAATGGAGGCTaGGATCTCAATTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: RVPWSTWLVFGRSHAFSGMVNGG*DLNCFT
Trigger: GGTGAAACAATTGAGATCCCAGCCTCCATTCACCAT...ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
CDS-3UTR CCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHRINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAAAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKRDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGRTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: SPACRRLGSRFHISRGAYRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...GTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAATCCCATTGCTGGGAATaGGTAGCCGGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQSHCWE*VAGFLG
Trigger: ACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGA...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTTCCCATTGCTGGGAATaGGTAGCCGGGTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTSHCWE*VAGFLG
Trigger: ACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGA...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSLSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSILSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATAAATGCAGCATTTCCTaGCACGTCCTTACATGGGTG +
Preference number: 4 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHKCSIS*HVLTWV
Trigger: CACCCATGTAAGGACGTGTCAGGAAATGCTGCATTT...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR TCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAAAATGCAGCATTTCCTaGCACGTCCTTACATGGGTG +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTKCSIS*HVLTWV
Trigger: CACCCATGTAAGGACGTGTCAGGAAATGCTGCATTT...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000484674.5
CDS-3UTR TCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGCAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMQTQKE*RPEMQH
Trigger: ATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTG...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR TCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATTGTGCGGACTTGGCTTaGCTTCTCCAGCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYCADLA*LLQLVE
Trigger: TTCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACA...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAATCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQSMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGAGACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: RRLGSRFHISRGAYTLQETLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...CTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPTLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TTTCTACATCTAAGTGTTGGTCTCTGCCACGGTCACATTCTGTGTTTTGTAGGCGACTTACCCCACCCCTaGTGCTGCTGTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: FLHLSVGLCHGHILCFVGDLPHP*CCCCCS
Trigger: GCTACAGCAACAGCAGCATCAGGGGTGGGGTAAGTC...GCCTACAAAACACAGAATGTGACCGTGGCAGAGACCAACACTTAGATGTAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATACAAAACTATGGTaGTGCCCACTAGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWYTKLW*CPLGSR
Trigger: TCTAGAGCCTAGTGGGCATCACCATAGTTTTGTATA...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTATCTCTGGTACCACTaGATTCGTTTAACGCCCCTG +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWYLWYH*IRLTPL
Trigger: CAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATA...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTAATCTCTCCCTGAGATaGAAACAGGATCTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLNLSLR*KQDLVC
Trigger: ACACACAAGATCCTGTTTTCATCTCAGGGAGAGATT...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGTCAAGTCTACAAGTaGCTTGTTCTGTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: MRGGLGICADGSAMGPIAGQVYK*LVLFCV
Trigger: AACGCAGAACAGAACAAGTCACTTGTAGACTTGACC...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCCAGATTCTACAAACTaGGGTAGGAGCACTACACTA +
Preference number: 4 (lower is better)
Translates to: FICLCCVLRGLPSARMVMPDSTN*GRSTTL
Trigger: TAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGG...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CAATCTCCGCTTGAAGGATGTAAGCTGCTAACAAGGCAGCATCCGATGTTTTACGAGCAGGCTCACCACTaGGCGGATTTTGCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: QSPLEGCKLLTRQHPMFYEQAHH*ADFAGK
Trigger: TTTGCCTGCAAAATCCGCTCAGTGGTGAGCCTGCTC...GTAAAACATCGGATGCTGCCTTGTTAGCAGCTTACATCCTTCAAGCGGAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCTGTCCGGCTGCTTCTCATGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PRLQSQLLAHCYLSGCFSCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...TGAGAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAAGTATTCACACTTCTTaGAGGAAAGAAGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: EEDLVYVPMVPRWVPLLGSIHTS*RKEVHS
Trigger: AGAGTGGACTTCTTTCCTTCAAGAAGTGTGAATACT...TCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AACTCGGGGGTCTGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGATGGATTTGGTTTTCTaGAGCAAAGCAAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: NSGVWRISRKKAMSRSDSMDLVF*SKARAT
Trigger: GGTGGCTCTTGCTTTGCTTCAGAAAACCAAATCCAT...CGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458630.5
CDS-3UTR TCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATATGGATTTGGTTTTCTaGAGCAAAGCAAGAGCCACC +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHMDLVF*SKARAT
Trigger: GGTGGCTCTTGCTTTGCTTCAGAAAACCAAATCCAT...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458630.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGCATCTCTCTGGATGGTaGAGGTGTACTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: RISRKKAMSRSDSVRMIRHLSGW*RCTRCR
Trigger: ACGACAGCGAGTACACCTGCACCATCCAGAGAGATG...CCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCCCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACCAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SPACRRLGSRFHISRGAYQLLAH*YLSGCF
Trigger: GAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTG...GTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGGCTGTAGGCCTCGTCTaGAATCACAGCTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGAVGLV*NHSYSL
Trigger: GAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGC...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TCCCTCTGCAAGGATGGTGATGCTTTCCTAGAACTTATGCAGAGGATGACCCTAGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: SLCKDGDAFLELMQRMTLVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...TAGGGTCATCCTCTGCATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGGAGGCTATCACTCACTaGATAGAAACACCAGATTCT +
Preference number: 4 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWEAITH*IETPDS
Trigger: AGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTC...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACCACTGAGCGGATTTTaGAGGCAAACCATCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQPLSGF*RQTIAC
Trigger: ACAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGG...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000449926.5
ENST00000484674.5
CDS-3UTR CCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLSSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTTCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGSSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTTCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: ELKSLGLGSHTRPSYACASSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATATGGTGAATGGAGGCTaGGATCTCAATTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHMVNGG*DLNCFT
Trigger: GGTGAAACAATTGAGATCCCAGCCTCCATTCACCAT...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTCTGTGTATTTCCGGTaGCTCCCGTTTGATCTTAGC +
Preference number: 4 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWSVYFR*LPFDLS
Trigger: GCTAAGATCAAACGGGAGCCACCGGAAATACACAGA...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCTCTTCTGCGGGTCCTaGGGACGCTGCTCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSLFCGS*GRCSAL
Trigger: CAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAG...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTTGTCCCCATGGGAAGTaGAACGCACTGGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTCPHGK*NALVWN
Trigger: ATTCCACACCAGTGCGTTCCACTTCCCATGGGGACA...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGGAGCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: ITEKGNVKVRLGKDDQEEHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...CTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTTGATCTTGCCCATTTaGCATCAGACATCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLLILPI*HQTSLC
Trigger: GCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAA...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGGAGCCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: ITEKGNVKVRLGKDDQEEPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...CTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAACCTCCTAGGCTGCAGTaGACTTTGAGTCATGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLDSTFPEVLTRFRSWSKPPRLQ*TLSHER
Trigger: CCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGG...TTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATGCTGTTGCGACTGCACTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: GVEWALSRKDSRPSMMEMLLRLH*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGTGCAGTCGCAACAG...CATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCACGTCCTTACATGGGTaGGGATCCACTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFTSLHG*GSTPYV
Trigger: AACATATGGAGTGGATCCTCACCCATGTAAGGACGT...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000484674.5
CDS-3UTR TCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTCAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLQTQKE*RPEMQH
Trigger: ATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTG...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR TCA 90 bp TTTGCAGGCAAACCATCGCCTGAGGGGACAAAAGTATTGATAGTGGAATTGTTCTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: FAGKPSPEGTKVLIVELFCRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...GAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTAGAAATCTCTCCCTaGGATGAAAACAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLLEISP*DENRIL
Trigger: CAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAA...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTGGAAACAGAGCTGACTaGCCCTCTTCTGCTAACATA +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPGNRAD*PSSANI
Trigger: TATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTTTCC...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATATGAAAGGTCAGAGTTaGGGCTATCACTCACTGCAT +
Preference number: 4 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHMKGQS*GYHSLH
Trigger: ATGCAGTGAGTGATAGCCTCAACTCTGACCTTTCAT...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CTAACAAGGCAGCATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCTGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LTRQHPMFYRGVGHGRDPCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...GGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGAGAAACAGAGTCGCTaGGCCTTTCTTGAAATAACT +
Preference number: 4 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLEKQSR*AFLEIT
Trigger: AGTTATTTCAAGAAAGGCTCAGCGACTCTGTTTCTC...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTGCTCCAGGCTCCTGCTaGTGCCGCTCATCAACCTGC +
Preference number: 4 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCAPGSC*CRSSTC
Trigger: GCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGC...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSRSLLI*RKTKYL
Trigger: CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000484674.5
CDS-3UTR GCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCCACATTTCCAGAGGTaGTTACACGCTTCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLPHFQR*LHASGV
Trigger: AACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGG...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGTTCCATGACTTCCTTTaGAACTCGGCCACTGTATCG +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLFHDFL*NSATVS
Trigger: CGATACAGTGGCCGAGTTGCAAAGGAAGTCATGGAA...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR GCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGGTGGCTCCATTGATCTaGCGGGAAAGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLVAPLI*RESNIS
Trigger: GCTGATGTTGCTTTCCCGGCAGATCAATGGAGCCAC...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTAAGTGTTGGTCTCTaGCACGGTCACATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPLSVGL*HGHILC
Trigger: ACACAGAATGTGACCGTGGCAGAGACCAACACTTAG...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTA +
Preference number: 4 (lower is better)
Translates to: SWGAGFRFLLLLNAAGGSRSLLI*RKTKYL
Trigger: TAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...GGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458630.5
CDS-3UTR CCA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGTCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: FICLCCVLRGLPSARMVMSSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp ATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGGAGATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: ITEKGNVKVRLGKDDQEEMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...CTCCTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFEAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTGGAAGACTAAATACCTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVGRLNT*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCC...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR CCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTGACGCTGCTCAGCCTTaGGCCATGGGTTATGGAGGG +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSDAAQP*AMGYGG
Trigger: CCCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTC...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATGTTCTGTTCTGCGTTTaGGGCTGTCCAATTAGGGTA +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYVLFCV*GCPIRV
Trigger: TACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCCAGACATCTCTTTGCTaGTTAGTTGTTCAAGCACCC +
Preference number: 4 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVQTSLC*LVVQAP
Trigger: GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTG...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGTCAAACTCGGGGGTCTaGCGGATATCACGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RISRKKAMSRSDSVRMIRSNSGV*RISRKK
Trigger: CTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA...CCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR CAA 72 bp ACCATCCCTGCTCTGTGTATTTCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCCATGACTTCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TIPALCISGGSR*ILALDSMTSFA
Trigger: TGCAAAGGAAGTCATGGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGAAATACACAGAGCAGGGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICTLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CAACTCGGCCATGTCACTATTTACCTGTATCGGAACCGGCTCCCTTTAAAGAATACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: QLGHVTIYLYRNRLPLKNTLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...ATTCTTTAAAGGGAGCCGGTTCCGATACAGGTAAATAGTGACATGGCCGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS-3UTR TCA 90 bp CAAGCAACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCTATACAAAACTATGGTaGTGCCCACTAGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: QATLVPPLGRGPRSLIHVYTKLW*CPLGSR
Trigger: TCTAGAGCCTAGTGGGCATCACCATAGTTTTGTATA...GACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGTTGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTAT +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLPLQGW*CFPRTY
Trigger: ATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGG...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTGTCCCCTCTGCTAGGTaGTACTACTGCAATAATCAG +
Preference number: 4 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTVPSAR*YYCNNQ
Trigger: CTGATTATTGCAGTAGTATCACCTAGCAGAGGGGAC...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AACTCGGGGGTCTGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGAGTATTCACACTTCTTaGAGGAAAGAAGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: NSGVWRISRKKAMSRSDSSIHTS*RKEVHS
Trigger: AGAGTGGACTTCTTTCCTTCAAGAAGTGTGAATACT...CGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCAGACCCCCGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp CTAACAAGGCAGCATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCGCCTTAGGGTGTCTATaGTTTGGATGGATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LTRQHPMFYRGVGHGRDPALGCL*FGWIWF
Trigger: AAACCAAATCCATCCAAATCATAGACACCCTAAGGC...GGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458630.5
CDS-3UTR GCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAATGCCGCTCATCAACCTaGTCAGCATCTTCCCGCCCG +
Preference number: 4 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQCRSST*SASSRP
Trigger: CGGGCGGGAAGATGCTGAGCAGGTTGATGAGCGGCA...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTCTGTGGCTGTTTTTGTaGTGTGATGGCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLLWLFL*CDGRIE
Trigger: CTCAATTCTGCCATCACAGCACAAAAACAGCCACAG...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAACCACTGAGCGGATTTTaGAGGCAAACCATCGCCTGT +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKPLSGF*RQTIAC
Trigger: ACAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGG...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR CCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAAGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQEAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSRTGVE*ALSRKD
Trigger: GTCCTTACGGGACAGTGCCCATTCCACACCAGTGCG...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTA +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMAWNALV*NGHCPV
Trigger: TACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTAAAAGATTCTTTTCCTaGTCCCTTCTAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFKRFFS*SLLRLL
Trigger: CAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATTCTACATCTAAGTGTTaGTCTCTGCCACGGTCACAT +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYSTSKC*SLPRSH
Trigger: ATGTGACCGTGGCAGAGACCAACACTTAGATGTAGA...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTTATGTAGATGACAAGTaGCAGTGGCTAGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: DLVYVPMVPRWVPLLGMGYVDDK*QWLVDF
Trigger: AAAATCAACTAGCCACTGCCACTTGTCATCTACATA...ACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTTATGTAGATGACAAGTaGCAGTGGCTAGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ELKSLGLGSHTRPSYACAYVDDK*QWLVDF
Trigger: AAAATCAACTAGCCACTGCCACTTGTCATCTACATA...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGAACATACTAGGATATaGAATACTGCATCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GGLGICADGSAMGPIAGNEHTRI*NTASVS
Trigger: AGAGACAGATGCAGTATTCCATATCCTAGTATGTTC...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGCACCTGGCTAGTTTTTaGGAGGAGTCATGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLHLASF*EESCLL
Trigger: GAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTG...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAATGGTATATGTGCCGATaGTTCCGCGATGGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKWYMCR*FRDGSH
Trigger: ATGGGACCCATCGCGGAACCATCGGCACATATACCA...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLGRDPF*SAGRLN
Trigger: ATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACC...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYLSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGACGTCCTTACATGGGTaGGGATCCACTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLTSLHG*GSTPYV
Trigger: AACATATGGAGTGGATCCTCACCCATGTAAGGACGT...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR TCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGACGTCCTTACATGGGTaGGGATCCACTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGTSLHG*GSTPYV
Trigger: AACATATGGAGTGGATCCTCACCCATGTAAGGACGT...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR TCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMASMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTTATCTCTGGTACCACTaGATTCGTTTAACGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICYLWYH*IRLTPL
Trigger: CAGGGGCGTTAAACGAATTCAGTGGTACCAGAGATA...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTCCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTAT +
Preference number: 4 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCPLQGW*CFPRTY
Trigger: ATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGG...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACATTAGAAATCTCTCCCTaGGATGAAAACAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTLEISP*DENRIL
Trigger: CAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAA...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACATTACTGTGTAGCACTTaGCATAAGTTGATTGACCTC +
Preference number: 4 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTLLCST*HKLIDL
Trigger: GAGGTCAATCAACTTATGTCAAGTGCTACACAGTAA...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATAAATTGTTGCTGGTATaGAAATGGTCAGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYKLLLV*KWSEKP
Trigger: GGGCTTCTCTGACCATTTTCATACCAGCAACAATTT...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGGTCCCCTCTGCTAGGTaGTACTACTGCAATAATCAG +
Preference number: 4 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGVPSAR*YYCNNQ
Trigger: CTGATTATTGCAGTAGTATCACCTAGCAGAGGGGAC...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTGCCTTAGGGTGTCTATaGTTTGGATGGATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLALGCL*FGWIWF
Trigger: AAACCAAATCCATCCAAATCATAGACACCCTAAGGC...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR TCA 90 bp GCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCATTCCTTACATGGGTaGGGATCCACTCCATATGTT +
Preference number: 4 (lower is better)
Translates to: ACRRLGSRFHISRGAYTLHSLHG*GSTPYV
Trigger: AACATATGGAGTGGATCCTCACCCATGTAAGGAATG...AAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458630.5
CDS-3UTR GCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCCATCTCTCTGGATGGTaGAGGTGTACTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMAHLSGW*RCTRCR
Trigger: ACGACAGCGAGTACACCTGCACCATCCAGAGAGATG...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp TTTCTACATCTAAGTGTTGGTCTCTGCCACGGTCACATTCTGTGTTTTGTAGGCTCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: FLHLSVGLCHGHILCFVGSSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...GCCTACAAAACACAGAATGTGACCGTGGCAGAGACCAACACTTAGATGTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTTGCTATCTGTCCGGCTaGTTCTCACGTGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSCYLSG*FSREAG
Trigger: TCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCTAAGTGTTGGTCTCTaGCACGGTCACATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICLSVGL*HGHILC
Trigger: ACACAGAATGTGACCGTGGCAGAGACCAACACTTAG...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TTTCTACATCTAAGTGTTGGTCTCTGCCACGGTCACATTCTGTGTTTTGTAGGCTCGAGGACTTCCCTCTaGAAGGATGGTGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: FLHLSVGLCHGHILCFVGSRTSL*KDGDAF
Trigger: GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGA...GCCTACAAAACACAGAATGTGACCGTGGCAGAGACCAACACTTAGATGTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAATCGAGGACTTCCCTCTaGAAGGATGGTGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKSRTSL*KDGDAF
Trigger: GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGA...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTTCATATGCCTGTGCTaGGTGCTTCGAGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMAFICLC*VLRGLP
Trigger: GGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTA +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHRSLLI*RKTKYL
Trigger: TAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAAATGCCGCTGCTTATCTaGGTCTACAAAGCGGATACC +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKMPLLI*VYKADT
Trigger: GGTATCCGCTTTGTAGACCCAGATAAGCAGCGGCAT...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPRINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAAGGGACAGCTCCGGCTaGGAACCATCCCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLRDSSG*EPSLLC
Trigger: ACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCT...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGCTCAGCCTTGGGCCATaGGTTATGGAGGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRLSLGP*VMEGQL
Trigger: GAGCTGTCCCTCCATAACCCATGGCCCAAGGCTGAG...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTGAACATACTAGGATATaGAATACTGCATCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFEHTRI*NTASVS
Trigger: AGAGACAGATGCAGTATTCCATATCCTAGTATGTTC...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAATCAAACTCGGGGGTCTaGCGGATATCACGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKSNSGV*RISRKK
Trigger: CTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CCA 90 bp TTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAAATATGTAAGAATAATTGATGGGTCCCATTGCTaGGAATGGGTAGCCGGGTTC +
Preference number: 4 (lower is better)
Translates to: FQRCLHASGVGAKYVRIIDGSHC*EWVAGF
Trigger: GAACCCGGCTACCCATTCCCAGCAATGGGACCCATC...AATTATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 4 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CCA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTCAGTGTTATGCCTTTaGCATTTTCCAAGTATATCC +
Preference number: 4 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHSVLCL*HFPSIS
Trigger: GGATATACTTGGAAAATGCCAAAGGCATAACACTGA...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR TCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTTCCATGATGGAGATGTaGACAGCTCTTCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSSMMEM*TALLRV
Trigger: GACCCGCAGAAGAGCTGTTCACATCTCCATCATGGA...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRCRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTGGTCAAGTCTACAAGTaGCTTGTTCTGTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICGQVYK*LVLFCV
Trigger: AACGCAGAACAGAACAAGTCACTTGTAGACTTGACC...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTAAATTGTTGCTGGTATaGAAATGGTCAGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCKLLLV*KWSEKP
Trigger: GGGCTTCTCTGACCATTTTCATACCAGCAACAATTT...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTCCAGCCAATGCCGCTaGTTATCTGGGTCTACAAAG +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMASSQCR*LSGSTK
Trigger: CTTTGTAGACCCAGATAAGCAGCGGCATTGGCTGGA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGAGAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: RRLGSRFHISRGAYTLQERSLLI*RKTKYL
Trigger: CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...CTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp TTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAAATATGTAAGAATAATTGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FQRCLHASGVGAKYVRIIAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...AATTATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR GCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTTGTGAACAGCTCTTCTaGGGGTCCTGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVCEQLF*GSWGRC
Trigger: GCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACA...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTCGAGGACTTCCCTCTaGAAGGATGGTGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMASRTSL*KDGDAF
Trigger: GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGCACTCGCCCTTCATATaGCTGTGCTGCGTGCTTCGA +
Preference number: 4 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRHSPFI*LCCVLR
Trigger: TCGAAGCACGCAGCACAGGCATATGAAGGGCGAGTG...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTCATCAGACATCTCTTTaGTGGTTAGTTGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLHQTSL*WLVVQA
Trigger: TGCTTGAACAACTAACCAGCAAAGAGATGTCTGATG...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCGAGGCTATCACTCACTaGATAGAAACACCAGATTCT +
Preference number: 4 (lower is better)
Translates to: PIRVSAAALLLCGSRNMSEAITH*IETPDS
Trigger: AGAATCTGGTGTTTCTATGCAGTGAGTGATAGCCTC...GGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAAATATGTAAGAATAAGGACTTGGTATATGTaGCGATGGTTCCGCGATGGG +
Preference number: 4 (lower is better)
Translates to: HFQRCLHASGVGAKYVRIRTWYM*RWFRDG
Trigger: CCCATCGCGGAACCATCGGCACATATACCAAGTCCT...TATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp ATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCTTTTGATCTGCAGTCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: IRCFTEESAMVEIPFDLQSSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...CTGCAGATCAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTTTGGGCCATGGGTTATaGAGGGACAGCTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVLGHGL*RDSSGW
Trigger: CCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAA...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGAGGAAGGTGTCCCCATaGGAAGTGGAACGCACTGGT +
Preference number: 4 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRRKVSP*EVERTG
Trigger: ACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCT...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCACCTCTGTAGCAGTTaGGGTGCTGGCTTCAGATTC +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSHLCSS*GAGFRF
Trigger: GAATCTGAAGCCAGCACCCCAACTGCTACAGAGGTG...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGTCTACATCTAAGTGTTaGTCTCTGCCACGGTCACAT +
Preference number: 4 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLSTSKC*SLPRSH
Trigger: ATGTGACCGTGGCAGAGACCAACACTTAGATGTAGA...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGTCTACATCTAAGTGTTaGTCTCTGCCACGGTCACAT +
Preference number: 4 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGSTSKC*SLPRSH
Trigger: ATGTGACCGTGGCAGAGACCAACACTTAGATGTAGA...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAATGCTCTACTTTTGTGTaGGTCCAGGAATATGTCCAT +
Preference number: 4 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQCSTFV*VQEYVH
Trigger: ATGGACATATTCCTGGACCCACACAAAAGTAGAGCA...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTTTGATCTTGCCCATTTaGCATCAGACATCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCLILPI*HQTSLC
Trigger: GCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAA...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTCAAACTCGGGGGTCTaGCGGATATCACGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMASNSGV*RISRKK
Trigger: CTTTTTCCGTGATATCCGCCAGACCCCCGAGTTTGA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTACCGATGGTTCCGCGATaGGTCCCATTGCTGGGAATG +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLPMVPR*VPLLGM
Trigger: CATTCCCAGCAATGGGACCCATCGCGGAACCATCGG...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp TTTCTACATCTAAGTGTTGGTCTCTGCCACGGTCACATTCTGTGTTTTGTAGGCCATGAGAGGAGGACTTaGTATATGTGCCGATGGTTC +
Preference number: 4 (lower is better)
Translates to: FLHLSVGLCHGHILCFVGHERRT*YMCRWF
Trigger: GAACCATCGGCACATATACCAAGTCCTCCTCTCATG...GCCTACAAAACACAGAATGTGACCGTGGCAGAGACCAACACTTAGATGTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCACAGGTACTGGCCTTTaGCATCTCTTATGTATTTCT +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFTGTGL*HLLCIS
Trigger: AGAAATACATAAGAGATGCCAAAGGCCAGTACCTGT...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR TCA 90 bp TTGACTTCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: LTSPACRRLGSRFHISRGGRDPF*SAGRLN
Trigger: ATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACC...ACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AGTTTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SFPSLFRQGMSLSLSSSGLSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...CCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGAAATTGTTGCTGGTATaGAAATGGTCAGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLKLLLV*KWSEKP
Trigger: GGGCTTCTCTGACCATTTTCATACCAGCAACAATTT...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GGTGTTTCCCTGAGTCATAATCCCCAATCTCCGCTTGAAGGATGTAAGCTGCTACCACTTGAATCTATTTaGAACCTCCGAAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: GVSLSHNPQSPLEGCKLLPLESI*NLRNKQ
Trigger: CTGCTTATTTCGGAGGTTGCAAATAGATTCAAGTGG...TAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TTGACTTCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTTCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: LTSPACRRLGSRFHISRGSSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...ACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGACACTGTGCGGACTTaGCTTGACTTCTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQDTVRT*LDFSSL
Trigger: CAAGCTGGAGAAGTCAAGCCAAGTCCGCACAGTGTC...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMARINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAAATATGTAAGAATACAAAGAGGAGTCCCATaGTCACAAGGAGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: HFQRCLHASGVGAKYVRIQRGVP*SQGANG
Trigger: TCCGTTTGCTCCTTGTGACCATGGGACTCCTCTTTG...TATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
3UTR CAA 72 bp ATTATCTGTGGCTGTTTTTGTGCTGTGATGGCAGAATaGAGCAGTTGTGACACAGTATGGCGTGCTAAACCA +
Preference number: 4 (lower is better)
Translates to: IICGCFCAVMAE*SSCDTVWRAKP
Trigger: TGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTCTGCCATCACAGCACAAAAACAGCCACAGATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTTTCAGGGTGTTTCCCTaGGTCATAATCCCCAATCTC +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSFRVFP*VIIPNL
Trigger: GAGATTGGGGATTATGACTCAGGGAAACACCCTGAA...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAACCTTTCCAGCTTCTCTaGATGTTTAGGGAAAAACTG +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKPFQLL*MFREKL
Trigger: CAGTTTTTCCCTAAACATTCAGAGAAGCTGGAAAGG...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR TCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTTGCAGGTGGCTCCATTaGTCTGCCGGGAAAGCAACA +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVCRWLH*SAGKAT
Trigger: TGTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCA...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTACCCTCAAGCCCCAGATaGCTTAGAAATCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLPSSPR*LRNLSL
Trigger: CAGGGAGAGATTTCTAAGTCATCTGGGGCTTGAGGG...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCTTACTGTGTAGCACTTaGCATAAGTTGATTGACCTC +
Preference number: 4 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPLLCST*HKLIDL
Trigger: GAGGTCAATCAACTTATGTCAAGTGCTACACAGTAA...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTGGAAACAGAGCTGACTaGCCCTCTTCTGCTAACATA +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSGNRAD*PSSANI
Trigger: TATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTTTCC...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCAGTATTCACACTTCTTaGAGGAAAGAAGTCCACTCT +
Preference number: 4 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPSIHTS*RKEVHS
Trigger: AGAGTGGACTTCTTTCCTTCAAGAAGTGTGAATACT...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR TCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTTGGGGCTTCTATGCCTaGTCCAACAGCACCACAGAG +
Preference number: 4 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFWGFYA*SNSTTE
Trigger: CTCTGTGGTGCTGTTGGATCAGGCATAGAAGCCCCA...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR GCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTACATCTCTCTGGATGGTaGAGGTGTACTCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLHLSGW*RCTRCR
Trigger: ACGACAGCGAGTACACCTGCACCATCCAGAGAGATG...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLRSLLI*RKTKYL
Trigger: CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp TTGACTTCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: LTSPACRRLGSRFHISRGRSLLI*RKTKYL
Trigger: CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...ACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000451277.5
CDS-3UTR GCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTGCTGGGAACCATCCCTaGTCTGTGTATTTCCGGTGG +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVAGNHP*SVYFRW
Trigger: CCACCGGAAATACACAGAGCAGGGATGGTTCCCAGC...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTACAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLQLLAH*YLSGCF
Trigger: GAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTG...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCGGAAGACTAAATACCTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFGRLNT*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCC...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR CCA 90 bp TTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAAATATGTAAGAATAATTGTTCCTTGGTCCACCTaGCTAGTTTTTGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FQRCLHASGVGAKYVRIIVPWST*LVFGRS
Trigger: ACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAAC...AATTATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR TCA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCTTTGTCCAACATTTCTaGCAGAACTATCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPFVQHF*QNYLSL
Trigger: CAGAGATAGATAGTTCTGTCAGAAATGTTGGACAAA...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCAATCTCTCCCTGAGATaGAAACAGGATCTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMANLSLR*KQDLVC
Trigger: ACACACAAGATCCTGTTTTCATCTCAGGGAGAGATT...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGGGAAACAGAGCTGACTaGCCCTCTTCTGCTAACATA +
Preference number: 4 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRGNRAD*PSSANI
Trigger: TATGTTAGCAGAAGAGGGTCAGTCAGCTCTGTTTCC...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAACTAGTTGATTTTAACTaGCCCCTAATCTCTACTAGG +
Preference number: 4 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKLVDFN*PLISTR
Trigger: CCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAG...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTGGCTGCAGTGGACTTTaGGTCATGAGAGGAGGACTT +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVGCSGL*VMRGGL
Trigger: AAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCC...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTCAGCTACTCGCTCATTaGTATCTGTCCGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFQLLAH*YLSGCF
Trigger: GAAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTG...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTCTAAGTGTTGGTCTCTaGCACGGTCACATTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCLSVGL*HGHILC
Trigger: ACACAGAATGTGACCGTGGCAGAGACCAACACTTAG...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTTGGCATCTCTCTGGATaGTGCAGGTGTACTCGCTGT +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVWHLSG*CRCTRC
Trigger: ACAGCGAGTACACCTGCACCATCCAGAGAGATGCCA...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGAAGCACATGGTGAATaGAGGCTGGGATCTCAATTG +
Preference number: 4 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQEAHGE*RLGSQL
Trigger: CAATTGAGATCCCAGCCTCCATTCACCATGTGCTTC...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTAGAATAAATTGCTGCTaGACACTGTGCGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCRINCC*TLCGLG
Trigger: GCCAAGTCCGCACAGTGTCCAGCAGCAATTTATTCT...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCTATGTAGATGACAAGTaGCAGTGGCTAGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPYVDDK*QWLVDF
Trigger: AAAATCAACTAGCCACTGCCACTTGTCATCTACATA...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTGGTAGCCGGGTTCCTTaGTCCACCTGGCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVGSRVP*STWLVF
Trigger: AAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACC...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTTCTACTGGAACCCAGTaGCACCAGCAGGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVSTGTQ*HQQEKL
Trigger: GAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGA...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp TTGACTTCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTTCAGTGTTATGCCTTTaGCATTTTCCAAGTATATCC +
Preference number: 4 (lower is better)
Translates to: LTSPACRRLGSRFHISRGSVLCL*HFPSIS
Trigger: GGATATACTTGGAAAATGCCAAAGGCATAACACTGA...ACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR TCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSGRDPF*SAGRLN
Trigger: ATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACC...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTACTCTAGGCCTTCCATaGTGGAGATGTGAACAGCTC +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVTLGLP*WRCEQL
Trigger: GAGCTGTTCACATCTCCATCATGGAAGGCCTAGAGT...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TTTCTACATCTAAGTGTTGGTCTCTGCCACGGTCACATTCTGTGTTTTGTAGGCTTTGTCCAACATTTCTaGCAGAACTATCTATCTCTG +
Preference number: 4 (lower is better)
Translates to: FLHLSVGLCHGHILCFVGFVQHF*QNYLSL
Trigger: CAGAGATAGATAGTTCTGTCAGAAATGTTGGACAAA...GCCTACAAAACACAGAATGTGACCGTGGCAGAGACCAACACTTAGATGTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTTAGAAATCTCTCCCTaGGATGAAAACAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMALEISP*DENRIL
Trigger: CAAGATCCTGTTTTCATCTCAGGGAGAGATTTCTAA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAACCAGATTCTACAAACTaGGGTAGGAGCACTACACTA +
Preference number: 4 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQPDSTN*GRSTTL
Trigger: TAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGG...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTCAGAGCAGCAGGGTCTaGAGGATAAAACTTCACACG +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVQSSRV*RIKLHT
Trigger: CGTGTGAAGTTTTATCCTGCAGACCCTGCTGCTCTG...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGGGAAGACTAAATACCTaGTTATTTCTTCTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGGRLNT*LFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCC...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCAAAAGATTCTTTTCCTaGTCCCTTCTAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMAKRFFS*SLLRLL
Trigger: CAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAAT +
Preference number: 4 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRGRDPF*SAGRLN
Trigger: ATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACC...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTTATACAAAACTATGGTaGTGCCCACTAGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCYTKLW*CPLGSR
Trigger: TCTAGAGCCTAGTGGGCATCACCATAGTTTTGTATA...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTACCTCTGCAAGGATGGTaGTGCTTTCCTAGAACTTAT +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLPLQGW*CFPRTY
Trigger: ATAAGTTCTAGGAAAGCATCACCATCCTTGCAGAGG...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp GTTAGAAATGGCATAGACTACTGTACTGTTAGAACTCTAGACACAAGGAACATAGGTCAAGTCTACAAGTaGCTTGTTCTGTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: VRNGIDYCTVRTLDTRNIGQVYK*LVLFCV
Trigger: AACGCAGAACAGAACAAGTCACTTGTAGACTTGACC...TATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCATTTCTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTCTAGTTGATTTTAACTaGCCCCTAATCTCTACTAGG +
Preference number: 4 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSLVDFN*PLISTR
Trigger: CCTAGTAGAGATTAGGGGTCAGTTAAAATCAACTAG...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTATGTTTAGACAGGGCATaGGCCTATCCCTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLCLDRA*AYPFLL
Trigger: AAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACA...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGTCAAGTAGGTTCAGATaGTGGCAAAGAAGGTCAAAC +
Preference number: 4 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRSSRFR*WQRRSN
Trigger: GTTTGACCTTCTTTGCCACCATCTGAACCTACTTGA...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAATGGTGAATGGAGGCTaGGATCTCAATTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLMVNGG*DLNCFT
Trigger: GGTGAAACAATTGAGATCCCAGCCTCCATTCACCAT...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTTCTGTGTATTTCCGGTaGCTCCCGTTTGATCTTAGC +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVSVYFR*LPFDLS
Trigger: GCTAAGATCAAACGGGAGCCACCGGAAATACACAGA...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATACTGGTAAGGATCAGTTTTATTGTCTAGAGCAGGATTGGCGTATTATGGCCTCAGTGTTATGCCTTTaGCATTTTCCAAGTATATCC +
Preference number: 4 (lower is better)
Translates to: HTGKDQFYCLEQDWRIMASVLCL*HFPSIS
Trigger: GGATATACTTGGAAAATGCCAAAGGCATAACACTGA...GGCCATAATACGCCAATCCTGCTCTAGACAATAAAACTGATCCTTACCAGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618556.4
3UTR CAA 72 bp GCAAATCTCTCCCTAAGAACCCCAATTATTCCACAGTaGTCATATTGTAAACATGGACATGGTTCTACCATC +
Preference number: 4 (lower is better)
Translates to: ANLSLRTPIIPQ*SYCKHGHGSTI
Trigger: GATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTGGGGTTCTTAGGGAGAGATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CAA 72 bp TTCTTAGATTCCAGCTGTGTTTTAGCATTCCAGTATTaGATCTTGCCCATTTGGCATCAGACATCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLDSSCVLAFQY*ILPIWHQTSLC
Trigger: GCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCTGGAATCTAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTCCAGATTCTACAAACTaGGGTAGGAGCACTACACTA +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVPDSTN*GRSTTL
Trigger: TAGTGTAGTGCTCCTACCTCAGTTTGTAGAATCTGG...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTAAGAAAAGACGCTTCTaGTTAGTTACTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVKKRRF*LVTPEP
Trigger: GGGCTCTGGAGTAACTAATCAGAAGCGTCTTTTCTT...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR GCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTCTGTGGCTGTTTTTGTaGTGTGATGGCAGAATTGAG +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVLWLFL*CDGRIE
Trigger: CTCAATTCTGCCATCACAGCACAAAAACAGCCACAG...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTTAGAAATGGCATAGACTACTGTACTGTTAGAACTCTAGACACAAGGAACATACCACTCTGTTGCGACTaGACTGGTTATTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VRNGIDYCTVRTLDTRNIPLCCD*TGYFFF
Trigger: AAAGAAGAAATAACCAGTGCAGTCGCAACAGAGTGG...TATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCATTTCTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR CCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTATGGTGAATGGAGGCTaGGATCTCAATTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVMVNGG*DLNCFT
Trigger: GGTGAAACAATTGAGATCCCAGCCTCCATTCACCAT...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTTAGAAATGGCATAGACTACTGTACTGTTAGAACTCTAGACACAAGGAACATATGCTCTACTTTTGTGTaGGTCCAGGAATATGTCCAT +
Preference number: 4 (lower is better)
Translates to: VRNGIDYCTVRTLDTRNICSTFV*VQEYVH
Trigger: ATGGACATATTCCTGGACCCACACAAAAGTAGAGCA...TATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCATTTCTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTCTCAGTTCCGTCTTGTaGATCTCAGCAATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFLSSVL*ISAIFL
Trigger: AAGGAAAATTGCTGAGATTCACAAGACGGAACTGAG...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR TCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTATTACTGTGTAGCACTTaGCATAAGTTGATTGACCTC +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLLLCST*HKLIDL
Trigger: GAGGTCAATCAACTTATGTCAAGTGCTACACAGTAA...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAAAAAGATTCTTTTCCTaGTCCCTTCTAAGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLKRFFS*SLLRLL
Trigger: CAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTTGCTCTACTTTTGTGTaGGTCCAGGAATATGTCCAT +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVCSTFV*VQEYVH
Trigger: ATGGACATATTCCTGGACCCACACAAAAGTAGAGCA...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CAA 72 bp ATGCCTGATCCAACAGCACCACAGAGTTTATCCATTTaGATTTTAAATCTTCAGTATCTCCCAGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: MPDPTAPQSLSI*ILNLQYLPAYL
Trigger: AAGATAAGCTGGGAGATACTGAAGATTTAAAATCAAAATGGATAAACTCTGTGGTGCTGTTGGATCAGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458630.5
CDS-3UTR GCA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTAGATCCCTTTTGATCTaGAGGAAGACTAAATACCTG +
Preference number: 4 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVRSLLI*RKTKYL
Trigger: CAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCT...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR GCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTCATCAGACATCTCTTTaGTGGTTAGTTGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFHQTSL*WLVVQA
Trigger: TGCTTGAACAACTAACCAGCAAAGAGATGTCTGATG...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTCATCAGACATCTCTTTaGTGGTTAGTTGTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVHQTSL*WLVVQA
Trigger: TGCTTGAACAACTAACCAGCAAAGAGATGTCTGATG...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR GCA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTCCACTTGAATCTATTTaGAACCTCCGAAATAAGCAG +
Preference number: 4 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFPLESI*NLRNKQ
Trigger: CTGCTTATTTCGGAGGTTGCAAATAGATTCAAGTGG...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR CCA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTGAACATACTAGGATATaGAATACTGCATCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVEHTRI*NTASVS
Trigger: AGAGACAGATGCAGTATTCCATATCCTAGTATGTTC...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
3UTR CAA 72 bp ATACCTGATCCAACAGCACCACAGAGTTTATCCATTTaGATTTTAAATCTTCAGTATCTCCCAGCTTATCTT +
Preference number: 4 (lower is better)
Translates to: IPDPTAPQSLSI*ILNLQYLPAYL
Trigger: AAGATAAGCTGGGAGATACTGAAGATTTAAAATCAAAATGGATAAACTCTGTGGTGCTGTTGGATCAGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS GCA 90 bp CTCAGCATCTTCCCGCCCGCCCGCCCGGGAGCGACGCGGCGGCGCTaGGGACCCTGGACCAGGCGTCCCTCAGCCCGGCAGCTCCGCACC +
Preference number: 5 (lower is better)
Translates to: LSIFPPARPGATRRR*GPWTRRPSARQLRT
Trigger: GGTGCGGAGCTGCCGGGCTGAGGGACGCCTGGTCCAGGGTCCGCAGCGCCGCCGCGTCGCTCCCGGGCGGGCGGGCGGGAAGATGCTGAG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS GCA 90 bp GCAGCCGCACGGTGCAGCTGTACTCGCGCTCCAGGCTCCTGCTGCTaGCGCTCATCAACCTGCTCAGCATCTTCCCGCCCGCCCGCCCGG +
Preference number: 5 (lower is better)
Translates to: AAARCSCTRAPGSCC*RSSTCSASSRPPAR
Trigger: CCGGGCGGGCGGGCGGGAAGATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS GCA 90 bp CCAGCAGCCGCACGGTGCAGCTGTACTCGCGCTCCAGGCTCCTGCTaGTGCCGCTCATCAACCTGCTCAGCATCTTCCCGCCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: PAAARCSCTRAPGSC*CRSSTCSASSRPPA
Trigger: GGCGGGCGGGCGGGAAGATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGCGGCTGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS GCA 90 bp AGGCACCTGCACCATCACCCCGGCCCCGTCGCTGCCGTTGCCTCCTaGTGGCCTCGTTCCTCCTCCTTATCCTCCTCCTTCCCTCAGCCG +
Preference number: 5 (lower is better)
Translates to: RHLHHHPGPVAAVAS*WPRSSSLSSSFPQP
Trigger: CGGCTGAGGGAAGGAGGAGGATAAGGAGGAGGAACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGGCCGGGGTGATGGTGCAGGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000451277.5
CDS CCA 90 bp CACCTGCACCATCACCCCGGCCCCGTCGCTGCCGTTGCCTCCTGCTaGCCTCGTTCCTCCTCCTTATCCTCCTCCTTCCCTCAGCCGCCA +
Preference number: 5 (lower is better)
Translates to: HLHHHPGPVAAVASC*PRSSSLSSSFPQPP
Trigger: TGGCGGCTGAGGGAAGGAGGAGGATAAGGAGGAGGAACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGGCCGGGGTGATGGTGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000451277.5
CDS-3UTR CAA 90 bp GCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: ALGHGLWRDSSGWEPSLLPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...GAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGGGACGCTGCTCAGCCTaGGGCCATGGGTTATGGAGG +
Preference number: 5 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWGRCSA*GHGLWR
Trigger: CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCC...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GCAGGCAAACCATCGCCTGTTCCTCCTCGGGCCCGCTGTGCCCCTGACACAGGGCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: AGKPSPVPPRARCAPDTGLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...CCCTGTGTCAGGGGCACAGCGGGCCCGAGGAGGAACAGGCGATGGTTTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR CAA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCGCCCCGTCGCTGCCGTaGCCTCCTGCTGGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLAPSLP*PPAGLV
Trigger: AACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGGC...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417257.6
CDS-3UTR CAA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCGGACGCTGCTCAGCCTaGGGCCATGGGTTATGGAGG +
Preference number: 5 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSGRCSA*GHGLWR
Trigger: CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCC...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: ARCLQGCRPRLQSQLLAHPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...ATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCCCCGTCGCTGCCGTaGCCTCCTGCTGGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: VMRGGLGICADGSAMGPIAPSLP*PPAGLV
Trigger: AACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGGC...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000451277.5
CDS-3UTR CAA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS TCA 90 bp ACGTTGAAGGGGGCCTCTGAGCGCAGGCATGGGGGCTCTTGCTCCTaGTGCCTTCTAGAGGAGGAAAGGTCATGCAGTCTCCAACCAGGG +
Preference number: 5 (lower is better)
Translates to: TLKGASERRHGGSCS*CLLEEERSCSLQPG
Trigger: CCCTGGTTGGAGACTGCATGACCTTTCCTCCTCTAGAAGGCATCAGGAGCAAGAGCCCCCATGCCTGCGCTCAGAGGCCCCCTTCAACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479319.1
CDS-3UTR CAA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCGGACGCTGCTCAGCCTaGGGCCATGGGTTATGGAGG +
Preference number: 5 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALGRCSA*GHGLWR
Trigger: CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCC...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp CCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: PRWVPLLGMGSRVPWSTWTATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...CCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS CCA 90 bp GGCAGGAAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGACTCTAGGCCTTGGAAATGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GRKVSPWEVERTGVE*ALSRKDSRPWKCSS
Trigger: GCTGGAGCATTTCCAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636859.1
CDS-3UTR CAA 90 bp AAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTGGACGCTGCTCAGCCTaGGGCCATGGGTTATGGAGG +
Preference number: 5 (lower is better)
Translates to: KWNALVWNGHCPVRTLGLGRCSA*GHGLWR
Trigger: CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCC...AAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp TGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: WVPLLGMGSRVPWSTWLVLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...AACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: CLQGCRPRLQSQLLAHCYPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...ATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS CCA 90 bp CGTGAGGCAGGAAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTaGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTGGAAATGCT +
Preference number: 5 (lower is better)
Translates to: REAGRCPHGKWNALV*NGHCPVRTLGLGNA
Trigger: AGCATTTCCAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTTCCTGCCTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636859.1
CDS-3UTR CAA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTTCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGGACGCTGCTCAGCCTaGGGCCATGGGTTATGGAGG +
Preference number: 5 (lower is better)
Translates to: VMRGGLGICADGSAMGPIGRCSA*GHGLWR
Trigger: CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCC...AATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: MCRWFRDGSHCWEWVAGFTATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...GAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSTATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp AGCAGTTGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: SSWGAGFRFLLLLNAAGGLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...GCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCAACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGGCCCCGTCGCTGCCGTaGCCTCCTGCTGGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGAPSLP*PPAGLV
Trigger: AACGAGGCCAGCAGGAGGCAACGGCAGCGACGGGGC...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CAA 90 bp CCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 5 (lower is better)
Translates to: PMVPRWVPLLGMGSRVPWSSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...CCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: VYVPMVPRWVPLLGMGSRLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGTCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: AICPAASHVRQEGVPMGSLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...ACTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: AVCRAVGLVCNHSYSLIATTERI*QANHRL
Trigger: CAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT...AGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GCACGCTGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATAGGCTGCAGTGGACTTaGAGTCATGAGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: ARCLQGCRPRLQSQLLAHRLQWT*SHERRT
Trigger: AGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT...ATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACAGCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTCTGTGTATTTCCGGTTCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: VMEGQLRLGTIPALCISGSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...ACCGGAAATACACAGAGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: GGLGICADGSAMGPIAGNTTERI*QANHRL
Trigger: CAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp CGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCCTTCTCAGGTACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: RVPWSTWLVFGRSHAFSGTTERI*QANHRL
Trigger: CAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT...ACCTGAGAAGGCATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
CDS-3UTR CAA 90 bp AGCCTTGGGCCATGGGTTATGGAGGGACAGCTCCGGCTGGGAACCATCCCTGCTATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 5 (lower is better)
Translates to: SLGPWVMEGQLRLGTIPAMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...AGCAGGGATGGTTCCCAGCCGGAGCTGTCCCTCCATAACCCATGGCCCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS CCA 90 bp CCTAAGTCGCCGATTCTTCCTGGCCACTTCCAAGCCCCAAATCGCTaGGACTTGTTGCTAAATCTTTACCTCACGTCCCCTAGAACCGCC +
Preference number: 5 (lower is better)
Translates to: PKSPILPGHFQAPNR*DLLLNLYLTSPRTA
Trigger: GGCGGTTCTAGGGGACGTGAGGTAAAGATTTAGCAACAAGTCCCAGCGATTTGGGGCTTGGAAGTGGCCAGGAAGAATCGGCGACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR CAA 90 bp AAGGTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 5 (lower is better)
Translates to: KVSPWEVERTGVEWALSRSSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...ACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp AGATGTGAACAGCTCTTCTGCGGGTCCTGGGGACGCTGCTCAGCCTTGGGCCATCAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 5 (lower is better)
Translates to: RCEQLFCGSWGRCSALGHQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...ATGGCCCAAGGCTGAGCAGCGTCCCCAGGACCCGCAGAAGAGCTGTTCACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATCTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: GGLGICADGSAMGPIAGNLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCTCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFTATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CATGGGAAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: HGKWNALVWNGHCPVRTLTATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...TAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATGACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: GVEWALSRKDSRPSMMEMTATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...CATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLTTERI*QANHRL
Trigger: CAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGAGGCTGCAGTGGACTTaGAGTCATGAGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWRLQWT*SHERRT
Trigger: AGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 5 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTAAGAAGTCCACTCTGTaGCGACTGCACTGGTTATTT +
Preference number: 5 (lower is better)
Translates to: CRWFRDGSHCWEWVAGFLKKSTL*RLHWLF
Trigger: AAATAACCAGTGCAGTCGCAACAGAGTGGACTTCTT...AAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTTCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGGGACGCTGCTCAGCCTaGGGCCATGGGTTATGGAGG +
Preference number: 5 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGGRCSA*GHGLWR
Trigger: CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCC...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMTTERI*QANHRL
Trigger: CAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTTTERI*QANHRL
Trigger: CAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TGCTATCTGTCCGGCTGCTTCTCACGTGAGGCAGGAAGGTGTCCCCATGGGAAGAAGAAGTCCACTCTGTaGCGACTGCACTGGTTATTT +
Preference number: 5 (lower is better)
Translates to: CYLSGCFSREAGRCPHGKKKSTL*RLHWLF
Trigger: AAATAACCAGTGCAGTCGCAACAGAGTGGACTTCTT...CTTCCCATGGGGACACCTTCCTGCCTCACGTGAGAAGCAGCCGGACAGATAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACATCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATCTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCGGATCAGTTTCTTTCTaGCATCGTTTAGTTCATCAG +
Preference number: 5 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSGSVSF*HRLVHQ
Trigger: CTGATGAACTAAACGATGCAAGAAAGAAACTGATCC...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATGCTGTGATGGCAGAATaGAGCAGTTGTGACACAGTA +
Preference number: 5 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHAVMAE*SSCDTV
Trigger: TACTGTGTCACAACTGCTCAATTCTGCCATCACAGC...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCGCTGTGATGGCAGAATaGAGCAGTTGTGACACAGTA +
Preference number: 5 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSAVMAE*SSCDTV
Trigger: TACTGTGTCACAACTGCTCAATTCTGCCATCACAGC...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCAGAGGTCCCAGATCTTaGATACATGTCAGGCATGGA +
Preference number: 5 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFRGPRS*IHVRHG
Trigger: TCCATGCCTGACATGTATCAAAGATCTGGGACCTCT...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTAGAGGTCCCAGATCTTaGATACATGTCAGGCATGGA +
Preference number: 5 (lower is better)
Translates to: ELKSLGLGSHTRPSYACARGPRS*IHVRHG
Trigger: TCCATGCCTGACATGTATCAAAGATCTGGGACCTCT...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCGCATCAGACATCTCTTaGCTGGTTAGTTGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: PSGTSRKSSCRIQRTAALASDIS*LVSCSS
Trigger: GCTTGAACAACTAACCAGCAAAGAGATGTCTGATGC...GAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGGTTCCGCGATGGGTCCCATTGCTGGGAATGGGTAGCCGGGTTCCTTGGTCCTTAGCATTCCAGTATTaGATCTTGCCCATTTGGCAT +
Preference number: 5 (lower is better)
Translates to: MVPRWVPLLGMGSRVPWSLAFQY*ILPIWH
Trigger: ATGCCAAATGGGCAAGATCAAATACTGGAATGCTAA...GGACCAAGGAACCCGGCTACCCATTCCCAGCAATGGGACCCATCGCGGAACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCAATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 5 (lower is better)
Translates to: WNALVWNGHCPVRTLGLPMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...TGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATTTACTCCAGAGCCCTTaGAGAGTGACCAGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHLLQSP*RVTSSR
Trigger: TCTTGAACTGGTCACTCTCAAAGGGCTCTGGAGTAA...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp CAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 5 (lower is better)
Translates to: QWHQQEKLLQNTEDSSSLSSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...TAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTAAGTCTACAAGTGACTaGTTCTGTTCTGCGTTTGGG +
Preference number: 5 (lower is better)
Translates to: ELKSLGLGSHTRPSYACAKSTSD*FCSAFG
Trigger: CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTT...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGAGAGGTCCCAGATCTTaGATACATGTCAGGCATGGA +
Preference number: 5 (lower is better)
Translates to: FICLCCVLRGLPSARMVMRGPRS*IHVRHG
Trigger: TCCATGCCTGACATGTATCAAAGATCTGGGACCTCT...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TGGGGTGCTGGCTTCAGATTCCTTCTCCTCCTCAATGCTGCAGGTGGCTCCATTGTATTGATAGTGGAATaGTTCAAACTCGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: WGAGFRFLLLLNAAGGSIVLIVE*FKLGGL
Trigger: CAGACCCCCGAGTTTGAACAATTCCACTATCAATAC...AATGGAGCCACCTGCAGCATTGAGGAGGAGAAGGAATCTGAAGCCAGCACCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTAGGCTGCAGTGGACTTaGAGTCATGAGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLRLQWT*SHERRT
Trigger: AGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 5 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp AAGTGGAACGCACTGGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTAAGAAGTCCACTCTGTaGCGACTGCACTGGTTATTT +
Preference number: 5 (lower is better)
Translates to: KWNALVWNGHCPVRTLGLKKSTL*RLHWLF
Trigger: AAATAACCAGTGCAGTCGCAACAGAGTGGACTTCTT...AAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAACTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: VLDSTFPEVLTRFRSWSKLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...TTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAATCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAATCCGGTGGCTCCCGTTaGATCTTAGCACTTGATTCC +
Preference number: 5 (lower is better)
Translates to: VLDSTFPEVLTRFRSWSKSGGSR*ILALDS
Trigger: GGAATCAAGTGCTAAGATCAAACGGGAGCCACCGGA...TTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp CATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAAATATGTAAGAATAGGACGCTGCTCAGCCTaGGGCCATGGGTTATGGAGG +
Preference number: 5 (lower is better)
Translates to: HFQRCLHASGVGAKYVRIGRCSA*GHGLWR
Trigger: CCTCCATAACCCATGGCCCAAGGCTGAGCAGCGTCC...TATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAACTGCAGGTGGCTCCATaGATCTGCCGGGAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKLQVAP*ICRESN
Trigger: GTTGCTTTCCCGGCAGATCAATGGAGCCACCTGCAG...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTGCATCAGACATCTCTTaGCTGGTTAGTTGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFASDIS*LVSCSS
Trigger: GCTTGAACAACTAACCAGCAAAGAGATGTCTGATGC...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATGCATCAGACATCTCTTaGCTGGTTAGTTGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHASDIS*LVSCSS
Trigger: GCTTGAACAACTAACCAGCAAAGAGATGTCTGATGC...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GAGTTGAAGAGCTTGGGCCTAGGATCCCACACTCGCCCTTCATATGCCTGTGCTTTTGATCTTGCCCATTaGGCATCAGACATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ELKSLGLGSHTRPSYACAFDLAH*ASDISL
Trigger: CAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAA...AGCACAGGCATATGAAGGGCGAGTGTGGGATCCTAGGCCCAAGCTCTTCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATTTTGATCTTGCCCATTaGGCATCAGACATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GGLGICADGSAMGPIAGNFDLAH*ASDISL
Trigger: CAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAA...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTTCCAGTATTTGATCTaGCCCATTTGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLFQYLI*PIWHQT
Trigger: TGTCTGATGCCAAATGGGCAAGATCAAATACTGGAA...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TGTCTGCAGGGCTGTAGGCCTCGTCTGCAATCACAGCTACTCGCTCATTGCTATGTATTGATAGTGGAATaGTTCAAACTCGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CLQGCRPRLQSQLLAHCYVLIVE*FKLGGL
Trigger: CAGACCCCCGAGTTTGAACAATTCCACTATCAATAC...ATAGCAATGAGCGAGTAGCTGTGATTGCAGACGAGGCCTACAGCCCTGCAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTTTGTATTGATAGTGGAATaGTTCAAACTCGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VDTSPLSPDSLFISGSTFVLIVE*FKLGGL
Trigger: CAGACCCCCGAGTTTGAACAATTCCACTATCAATAC...AAAAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTGACTTCTCCAGCTTGTAGAAGGCTTGGTTCTCGATTCCACATTTCCAGAGGTACCACTGAGCGGATTTaGCAGGCAAACCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: LTSPACRRLGSRFHISRGTTERI*QANHRL
Trigger: CAGGCGATGGTTTGCCTGCAAAATCCGCTCAGTGGT...ACCTCTGGAAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTGGAGAAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGCCGCGATGGGTCCCATaGCTGGGAATGGGTAGCCGG +
Preference number: 5 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRPRWVP*LGMGSR
Trigger: CCGGCTACCCATTCCCAGCAATGGGACCCATCGCGG...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAAAGGCTGCAGTGGACTTaGAGTCATGAGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQRLQWT*SHERRT
Trigger: AGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 5 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLSSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GGAATGGGTAGCCGGGTTCCTTGGTCCACCTGGCTAGTTTTTGGGAGGAGTCATCCTTCAAATTTCAGCTaGGTCACCTCATTCCATTTA +
Preference number: 5 (lower is better)
Translates to: GMGSRVPWSTWLVFGRSHPSNFS*VTSFHL
Trigger: TAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGG...ATGACTCCTCCCAAAAACTAGCCAGGTGGACCAAGGAACCCGGCTACCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR CAA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGCAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 5 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp CAACTCGGCCATGTCACTATTTACCTGTATCGGAACCGGCTCCCTTTAAAGAATACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: QLGHVTIYLYRNRLPLKNTATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...ATTCTTTAAAGGGAGCCGGTTCCGATACAGGTAAATAGTGACATGGCCGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS-3UTR CAA 90 bp ATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTTTCGGATCAGTTTCTTTCTaGCATCGTTTAGTTCATCAG +
Preference number: 5 (lower is better)
Translates to: MPVLRASRTSLCKDGDAFGSVSF*HRLVHQ
Trigger: CTGATGAACTAAACGATGCAAGAAAGAAACTGATCC...GAAAGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AGGTGGACACCAGCCCCCTGTCTCCTGACAGCCTTTTCATCTCTGGGTCTACTTAGGATCTCCTTCGGTTaGTATTGTCACTCGATAAAT +
Preference number: 5 (lower is better)
Translates to: RWTPAPCLLTAFSSLGLLRISFG*YCHSIN
Trigger: ATTTATCGAGTGACAATACAAACCGAAGGAGATCCT...AAGTAGACCCAGAGATGAAAAGGCTGTCAGGAGACAGGGGGCTGGTGTCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATAGGATCTCCTTCGGTTaGTATTGTCACTCGATAAAT +
Preference number: 5 (lower is better)
Translates to: GGLGICADGSAMGPIAGNRISFG*YCHSIN
Trigger: ATTTATCGAGTGACAATACAAACCGAAGGAGATCCT...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGAGGCTGCAGTGGACTTaGAGTCATGAGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLRLQWT*SHERRT
Trigger: AGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GGCTTGGTTCTCGATTCCACATTTCCAGAGGTGCTTACACGCTTCAGGAGTTGGATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 5 (lower is better)
Translates to: GLVLDSTFPEVLTRFRSWMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...CCAACTCCTGAAGCGTGTAAGCACCTCTGGAAATGTGGAATCGAGAACCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000451277.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GGTGTGGAATGGGCACTGTCCCGTAAGGACTCTAGGCCTTCCATGATGGAGATGTATCCATTAGACCACTaGAATCTATTTGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: GVEWALSRKDSRPSMMEMYPLDH*NLFATS
Trigger: GGAGGTTGCAAATAGATTCAAGTGGTCTAATGGATA...CATCTCCATCATGGAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGAATCGCTGGGACTTGTaGCTAAATCTTTACCTCACG +
Preference number: 5 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWNRWDL*LNLYLT
Trigger: CGTGAGGTAAAGATTTAGCAACAAGTCCCAGCGATT...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR CAA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGCCAAATCGCTGGGACTaGTTGCTAAATCTTTACCTC +
Preference number: 5 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMPNRWD*LLNLYL
Trigger: GAGGTAAAGATTTAGCAACAAGTCCCAGCGATTTGG...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS TCA 90 bp AGTGGACCCTCTTGTTTCCTTGAAGAACAACAAACCCAAAAGGAGTaGAGGCCAGAAATGCAGCATTTCCTGACACGTCCTCAGTTCCGT +
Preference number: 5 (lower is better)
Translates to: SGPSCFLEEQQTQKE*RPEMQHFLTRPQFR
Trigger: ACGGAACTGAGGACGTGTCAGGAAATGCTGCATTTCTGGCCTTCACTCCTTTTGGGTTTGTTGTTCTTCAAGGAAACAAGAGGGTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451277.5
CDS-3UTR CAA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 5 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDSSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp AGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATCCTTCAAATTTCAGCTaGGTCACCTCATTCCATTTA +
Preference number: 5 (lower is better)
Translates to: SHERRTWYMCRWFRDGSHPSNFS*VTSFHL
Trigger: TAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGG...ATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR CAA 90 bp CTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 5 (lower is better)
Translates to: LQWTLSHERRTWYMCRWFQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...GAACCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GGGAAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTCTCTTAACTACACTTaGTCCAACATTTCTGACAGA +
Preference number: 5 (lower is better)
Translates to: GKHPPRLQWTLSHERRTWSLNYT*SNISDR
Trigger: TCTGTCAGAAATGTTGGACAAAGTGTAGTTAAGAGA...CCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTCTAAGGCTGTTGATCTaGGAATTCTATTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: HMPVLRASRTSLCKDGDALRLLI*EFYFLK
Trigger: CTTCAGAAAATAGAATTCCAAGATCAACAGCCTTAG...AGCATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCCTAAGGCTGTTGATCTaGGAATTCTATTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: NPVAPAGKAPAEYRGQQLLRLLI*EFYFLK
Trigger: CTTCAGAAAATAGAATTCCAAGATCAACAGCCTTAG...GAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTTCCAGTATTTGATCTaGCCCATTTGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMFQYLI*PIWHQT
Trigger: TGTCTGATGCCAAATGGGCAAGATCAAATACTGGAA...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCCTAAGAAATTCACATTaGCAGGTAGTTTACCCTCTA +
Preference number: 5 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSLRNSH*QVVYPL
Trigger: TAGAGGGTAAACTACCTGCAAATGTGAATTTCTTAG...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTGGGAATGAGGGGACAAAAGTATaGATAGTGGAATTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: GGLGICADGSAMGPIAGNEGTKV*IVELFK
Trigger: TTTGAACAATTCCACTATCAATACTTTTGTCCCCTC...ATTCCCAGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAAAGGCTGCAGTGGACTTaGAGTCATGAGAGGAGGACT +
Preference number: 5 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKRLQWT*SHERRT
Trigger: AGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 5 (lower is better)
Translates to: APAEYRGQQLSSFQLVSPMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...AGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp ACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCTTCAGTGTTATGCCTTaGGCATTTTCCAAGTATATC +
Preference number: 5 (lower is better)
Translates to: TGTQWHQQEKLLQNTEDSFSVMP*AFSKYI
Trigger: GATATACTTGGAAAATGCCAAAGGCATAACACTGAA...GCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGAGTTCAGCTCTGATGTaGCTGGTGTTTGACCACTCA +
Preference number: 5 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLSSALM*LVFDHS
Trigger: TGAGTGGTCAAACACCAGCAACATCAGAGCTGAACT...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTCAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 5 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000458630.5
ENST00000484674.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTCAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 5 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp ACCCTAGTGCCTCCACTGGGAAGAGGTCCCAGATCTTTGATACATGTCAGGCATTTAGCATTCCAGTATTaGATCTTGCCCATTTGGCAT +
Preference number: 5 (lower is better)
Translates to: TLVPPLGRGPRSLIHVRHLAFQY*ILPIWH
Trigger: ATGCCAAATGGGCAAGATCAAATACTGGAATGCTAA...ATGCCTGACATGTATCAAAGATCTGGGACCTCTTCCCAGTGGAGGCACTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTCATATGCCTGTGCTGCGTGCTTCGAGGACTTCCCTCTGCAAGGATGGTGATGCTAAGAAATTCACATTaGCAGGTAGTTTACCCTCTA +
Preference number: 5 (lower is better)
Translates to: FICLCCVLRGLPSARMVMLRNSH*QVVYPL
Trigger: TAGAGGGTAAACTACCTGCAAATGTGAATTTCTTAG...CATCACCATCCTTGCAGAGGGAAGTCCTCGAAGCACGCAGCACAGGCATATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp ATGAGAGGAGGACTTGGTATATGTGCCGATGGTTCCGCGATGGGTCCCATTGCTCTAAGAAATTCACATTaGCAGGTAGTTTACCCTCTA +
Preference number: 5 (lower is better)
Translates to: MRGGLGICADGSAMGPIALRNSH*QVVYPL
Trigger: TAGAGGGTAAACTACCTGCAAATGTGAATTTCTTAG...AGCAATGGGACCCATCGCGGAACCATCGGCACATATACCAAGTCCTCCTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGTATTGATAGTGGAATaGTTCAAACTCGGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: FCVWGCPIRVSAAALLLCVLIVE*FKLGGL
Trigger: CAGACCCCCGAGTTTGAACAATTCCACTATCAATAC...ACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCAGGAGTTACTCCAGAGCCCTTaGAGAGTGACCAGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: DITEKGNVKVRLGKDDQELLQSP*RVTSSR
Trigger: TCTTGAACTGGTCACTCTCAAAGGGCTCTGGAGTAA...CTCCTGATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GATGAGTCTACTGGAACCCAGTGGCACCAGCAGGAAAAGCTCCTGCAGAATACATATCCATTAGACCACTaGAATCTATTTGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: DESTGTQWHQQEKLLQNTYPLDH*NLFATS
Trigger: GGAGGTTGCAAATAGATTCAAGTGGTCTAATGGATA...TGTATTCTGCAGGAGCTTTTCCTGCTGGTGCCACTGGGTTCCAGTAGACTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TTTCCCAGTTTGTTTAGACAGGGCATGAGCCTATCCCTTTCTTCTTCTGGGAAATTGTTGCTAATTCCCTaGGGTGCCTCTGGATTCCAG +
Preference number: 5 (lower is better)
Translates to: FPSLFRQGMSLSLSSSGKLLLIP*GASGFQ
Trigger: CTGGAATCCAGAGGCACCCAAGGGAATTAGCAACAA...TTTCCCAGAAGAAGAAAGGGATAGGCTCATGCCCTGTCTAAACAAACTGGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS GCA 90 bp GCCTTTGGCATCTCTTATGTATTTCTTGTTGCTAATTCCCTTGGGTaGCTCTGGATTCCAGGCCTCTTACAGATGATTCTGAAACTCCGT +
Preference number: 5 (lower is better)
Translates to: AFGISYVFLVANSLG*LWIPGLLQMILKLR
Trigger: ACGGAGTTTCAGAATCATCTGTAAGAGGCCTGGAATCCAGAGGCACCCAAGGGAATTAGCAACAAGAAATACATAAGAGATGCCAAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR CAA 90 bp AAACACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATCCTTCAAATTTCAGCTaGGTCACCTCATTCCATTTA +
Preference number: 5 (lower is better)
Translates to: KHPPRLQWTLSHERRTWYPSNFS*VTSFHL
Trigger: TAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGG...ATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
CDS-3UTR CAA 90 bp ATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAGCACCCCAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 5 (lower is better)
Translates to: ILPIWHQTSLCWLVVQAPQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...GGGTGCTTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CACCCTCCTAGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGGATGAAAACAGGATCTaGTGTGTGATTGGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: HPPRLQWTLSHERRTWYMDENRI*CVIGFR
Trigger: TCTAAAACCAATCACACACAAGATCCTGTTTTCATC...CATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCTAGGAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTAGCATTCCAGTATTaGATCTTGCCCATTTGGCAT +
Preference number: 5 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLLAFQY*ILPIWH
Trigger: ATGCCAAATGGGCAAGATCAAATACTGGAATGCTAA...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CTAACAAGGCAGCATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCGAGGGGACAAAAGTATaGATAGTGGAATTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: LTRQHPMFYRGVGHGRDPEGTKV*IVELFK
Trigger: TTTGAACAATTCCACTATCAATACTTTTGTCCCCTC...GGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGATGCTGCCTTGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GACAAAATAGGGGAGGTCAAGTCTACAAGTGACTTGTTCTGTTCTGCGTTTGGGATGAGTTTTCCCAGTTaGTTTAGACAGGGCATGAGC +
Preference number: 5 (lower is better)
Translates to: DKIGEVKSTSDLFCSAFGMSFPS*FRQGMS
Trigger: GCTCATGCCCTGTCTAAACAAACTGGGAAAACTCAT...CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTTGACCTCCCCTATTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATACTCTTATGTATTTCTTGTaGCTAATTCCCTTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: RGQQLSSFQLVSPLLGDTLMYFL*LIPLGA
Trigger: GGCACCCAAGGGAATTAGCAACAAGAAATACATAAG...AGTATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR CAA 90 bp AGGCTGCAGTGGACTTTGAGTCATGAGAGGAGGACTTGGTATATGTGCCGATGGTCTCTTATGTATTTCTaGTTGCTAATTCCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: RLQWTLSHERRTWYMCRWSLMYF*LLIPLG
Trigger: ACCCAAGGGAATTAGCAACAAGAAATACATAAGAGA...CCATCGGCACATATACCAAGTCCTCCTCTCATGACTCAAAGTCCACTGCAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR CAA 90 bp CCAGCAGGAAAAGCTCCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAAAACAGGTACTGGCCTTaGGCATCTCTTATGTATTTC +
Preference number: 5 (lower is better)
Translates to: PAGKAPAEYRGQQLSSFQNRYWP*ASLMYF
Trigger: GAAATACATAAGAGATGCCAAAGGCCAGTACCTGTT...TTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGGAGCTTTTCCTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS TCA 90 bp AGCCCTTTGAGAGTGACCAGTTCAAGAGGTAGTATTCACACTTCTTaGAGGAAAGAAGTCCACTCTGTTGCGACTGCACTGGTTATTTCT +
Preference number: 5 (lower is better)
Translates to: SPLRVTSSRGSIHTS*RKEVHSVATALVIS
Trigger: AGAAATAACCAGTGCAGTCGCAACAGAGTGGACTTCTTTCCTTCAAGAAGTGTGAATACTACCTCTTGAACTGGTCACTCTCAAAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GGTGTTTCCCTGAGTCATAATCCCCAATCTCCGCTTGAAGGATGTAAGCTGCTACCTTCAAATTTCAGCTaGGTCACCTCATTCCATTTA +
Preference number: 5 (lower is better)
Translates to: GVSLSHNPQSPLEGCKLLPSNFS*VTSFHL
Trigger: TAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGG...TAGCAGCTTACATCCTTCAAGCGGAGATTGGGGATTATGACTCAGGGAAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421674.5
CDS-3UTR CAA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAACTGTGCGGACTTGGCTaGACTTCTCCAGCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQLCGLG*TSPACR
Trigger: TCTACAAGCTGGAGAAGTCAAGCCAAGTCCGCACAG...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GTTCTGTTCTGCGTTTGGGGCTGTCCAATTAGGGTATCAGCAGCTGCTCTACTTGATGAAAACAGGATCTaGTGTGTGATTGGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: VLFCVWGCPIRVSAAALLDENRI*CVIGFR
Trigger: TCTAAAACCAATCACACACAAGATCCTGTTTTCATC...AAGTAGAGCAGCTGCTGATACCCTAATTGGACAGCCCCAAACGCAGAACAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCATTGTTCCAGTATTTGATCTaGCCCATTTGGCATCAGACA +
Preference number: 5 (lower is better)
Translates to: LGYQQLLYFCVGPGICPLFQYLI*PIWHQT
Trigger: TGTCTGATGCCAAATGGGCAAGATCAAATACTGGAA...CAATGGACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CCTGCAGAATACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGGAGGGGACAAAAGTATaGATAGTGGAATTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: PAEYRGQQLSSFQLVSPLEGTKV*IVELFK
Trigger: TTTGAACAATTCCACTATCAATACTTTTGTCCCCTC...CAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTATTCTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp TGGCGGATATCACGGAAAAAGGCAATGTCAAGGTCAGACTCGGTAAGGATGATCTATCCATTAGACCACTaGAATCTATTTGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: WRISRKKAMSRSDSVRMIYPLDH*NLFATS
Trigger: GGAGGTTGCAAATAGATTCAAGTGGTCTAATGGATA...GATCATCCTTACCGAGTCTGACCTTGACATTGCCTTTTTCCGTGATATCCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS TCA 90 bp CATCCGATGTTTTACAGAGGAGTCGGCCATGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAATACCTGGTTATTTCTTCTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: HPMFYRGVGHGRDPF*SAGRLNTWLFLLSE
Trigger: CTCTGAAAGAAGAAATAACCAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAACATCGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
ENST00000558108.6
CDS CCA 90 bp GGCATCTCTTATGTATTTCTTGTTGCTAATTCCCTTGGGTGCCTCTaGATTCCAGGCCTCTTACAGATGATTCTGAAACTCCGTATTGTT +
Preference number: 5 (lower is better)
Translates to: GISYVFLVANSLGCL*IPGLLQMILKLRIV
Trigger: AACAATACGGAGTTTCAGAATCATCTGTAAGAGGCCTGGAATCCAGAGGCACCCAAGGGAATTAGCAACAAGAAATACATAAGAGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS-3UTR CAA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCCTTCAAATTTCAGCTaGGTCACCTCATTCCATTTA +
Preference number: 5 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICPSNFS*VTSFHL
Trigger: TAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGG...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CAA 90 bp GTTAGAAATGGCATAGACTACTGTACTGTTAGAACTCTAGACACAAGGAACATAACAGCTACTCGCTCATaGCTATCTGTCCGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: VRNGIDYCTVRTLDTRNITATRS*LSVRLL
Trigger: AAGCAGCCGGACAGATAGCAATGAGCGAGTAGCTGT...TATGTTCCTTGTGTCTAGAGTTCTAACAGTACAGTAGTCTATGCCATTTCTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TACAGAGGACAGCAGCTCTCTAGTTTTCAACTAGTGTCCCCTCTGCTAGGTGATGAGGGGACAAAAGTATaGATAGTGGAATTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: YRGQQLSSFQLVSPLLGDEGTKV*IVELFK
Trigger: TTTGAACAATTCCACTATCAATACTTTTGTCCCCTC...ATCACCTAGCAGAGGGGACACTAGTTGAAAACTAGAGAGCTGCTGTCCTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000417257.6
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS-3UTR CAA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTCTAAGGCTGTTGATCTaGGAATTCTATTTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICLRLLI*EFYFLK
Trigger: CTTCAGAAAATAGAATTCCAAGATCAACAGCCTTAG...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GTCCAATTAGGGTATCAGCAGCTGCTCTACTTTTGTGTGGGTCCAGGAATATGTGATGAAAACAGGATCTaGTGTGTGATTGGTTTTAGA +
Preference number: 5 (lower is better)
Translates to: VQLGYQQLLYFCVGPGICDENRI*CVIGFR
Trigger: TCTAAAACCAATCACACACAAGATCCTGTTTTCATC...ACATATTCCTGGACCCACACAAAAGTAGAGCAGCTGCTGATACCCTAATTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTAAGTCTACAAGTGACTaGTTCTGTTCTGCGTTTGGG +
Preference number: 5 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSKSTSD*FCSAFG
Trigger: CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTT...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGGCTGTGATGGCAGAATaGAGCAGTTGTGACACAGTA +
Preference number: 5 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRAVMAE*SSCDTV
Trigger: TACTGTGTCACAACTGCTCAATTCTGCCATCACAGC...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGTTACTCCAGAGCCCTTaGAGAGTGACCAGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRLLQSP*RVTSSR
Trigger: TCTTGAACTGGTCACTCTCAAAGGGCTCTGGAGTAA...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618556.4
CDS-3UTR CAA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTAGGCTGGGATCTCAATaGTTTCACCACAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCRLGSQ*FHHRLC
Trigger: ACAAAGTCTGTGGTGAAACAATTGAGATCCCAGCCT...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAACAGCTTGTAGAAGGCTaGGTTCTCGATTCCACATTT +
Preference number: 5 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQQLVEG*VLDSTF
Trigger: AAATGTGGAATCGAGAACCAAGCCTTCTACAAGCTG...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AAAAGATTCTTTTCCTGGTCCCTTCTAAGGCTGTTGATCTTGGAATTCTATTTTTTAGAGTTGAAGAGCTaGGGCCTAGGATCCCACACT +
Preference number: 5 (lower is better)
Translates to: KRFFSWSLLRLLILEFYFLELKS*GLGSHT
Trigger: AGTGTGGGATCCTAGGCCCAAGCTCTTCAACTCTAA...AAAATAGAATTCCAAGATCAACAGCCTTAGAAGGGACCAGGAAAAGAATCTTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp AGGCTAAATTCAGCTCACTGTTTTCATAAAGTTTTATTGGAACACAGCCATGTTTTAGAGTTGAAGAGCTaGGGCCTAGGATCCCACACT +
Preference number: 5 (lower is better)
Translates to: RLNSAHCFHKVLLEHSHVLELKS*GLGSHT
Trigger: AGTGTGGGATCCTAGGCCCAAGCTCTTCAACTCTAA...AACATGGCTGTGTTCCAATAAAACTTTATGAAAACAGTGAGCTGAATTTAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTAAGTCTACAAGTGACTaGTTCTGTTCTGCGTTTGGG +
Preference number: 5 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCKSTSD*FCSAFG
Trigger: CCCAAACGCAGAACAGAACAAGTCACTTGTAGACTT...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTTGCAGGCAAACCATCGCCTGAGGGGACAAAAGTATTGATAGTGGAATTGTTCTTCAGTGTTATGCCTTaGGCATTTTCCAAGTATATC +
Preference number: 5 (lower is better)
Translates to: FAGKPSPEGTKVLIVELFFSVMP*AFSKYI
Trigger: GATATACTTGGAAAATGCCAAAGGCATAACACTGAA...GAACAATTCCACTATCAATACTTTTGTCCCCTCAGGCGATGGTTTGCCTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp CATTTGCAGGTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAAGGCTGGGATCTCAATaGTTTCACCACAGACTTTGT +
Preference number: 5 (lower is better)
Translates to: HLQVVYPLLLKDAVCYSLRLGSQ*FHHRLC
Trigger: ACAAAGTCTGTGGTGAAACAATTGAGATCCCAGCCT...TAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTACCTGCAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAATTTGATCTTGCCCATTaGGCATCAGACATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQFDLAH*ASDISL
Trigger: CAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAA...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp CAATTATTCCACAGTTGTCATATTGTAAACATGGACATGGTTCTACCATCTCGGCCTTCAAATTTCAGCTaGGTCACCTCATTCCATTTA +
Preference number: 5 (lower is better)
Translates to: QLFHSCHIVNMDMVLPSRPSNFS*VTSFHL
Trigger: TAAATGGAATGAGGTGACCAAGCTGAAATTTGAAGG...CCGAGATGGTAGAACCATGTCCATGTTTACAATATGACAACTGTGGAATAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402883.5
ENST00000417257.6
CDS-3UTR CAA 90 bp AGCTGTGTTTTAGCATTCCAGTATTTGATCTTGCCCATTTGGCATCAGACATCTTCTCTTAACTACACTTaGTCCAACATTTCTGACAGA +
Preference number: 5 (lower is better)
Translates to: SCVLAFQYLILPIWHQTSSLNYT*SNISDR
Trigger: TCTGTCAGAAATGTTGGACAAAGTGTAGTTAAGAGA...AGATGTCTGATGCCAAATGGGCAAGATCAAATACTGGAATGCTAAAACACAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp GAATTGAGCAGTTGTGACACAGTATGGCGTGCTAAACCAAAATATTTACTGTGTGGATCAGTTTCTTTCTaGCATCGTTTAGTTCATCAG +
Preference number: 5 (lower is better)
Translates to: ELSSCDTVWRAKPKYLLCGSVSF*HRLVHQ
Trigger: CTGATGAACTAAACGATGCAAGAAAGAAACTGATCC...ACACAGTAAATATTTTGGTTTAGCACGCCATACTGTGTCACAACTGCTCAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TATTTGATCTTGCCCATTTGGCATCAGACATCTCTTTGCTGGTTAGTTGTTCAAAGGATCTCCTTCGGTTaGTATTGTCACTCGATAAAT +
Preference number: 5 (lower is better)
Translates to: YLILPIWHQTSLCWLVVQRISFG*YCHSIN
Trigger: ATTTATCGAGTGACAATACAAACCGAAGGAGATCCT...TTGAACAACTAACCAGCAAAGAGATGTCTGATGCCAAATGGGCAAGATCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS-3UTR CAA 90 bp TTCCAGAGGTGCTTACACGCTTCAGGAGTTGGAGCAAAATATGTAAGAATAATTTTCAGTGTTATGCCTTaGGCATTTTCCAAGTATATC +
Preference number: 5 (lower is better)
Translates to: FQRCLHASGVGAKYVRIIFSVMP*AFSKYI
Trigger: GATATACTTGGAAAATGCCAAAGGCATAACACTGAA...AATTATTCTTACATATTTTGCTCCAACTCCTGAAGCGTGTAAGCACCTCTGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000421674.5
ENST00000458630.5
CDS-3UTR CAA 90 bp GTAGTTTACCCTCTACTGCTTAAAGATGCAGTATGCTATTCTTTAGTAAGAGTTTCTCTTAACTACACTTaGTCCAACATTTCTGACAGA +
Preference number: 5 (lower is better)
Translates to: VVYPLLLKDAVCYSLVRVSLNYT*SNISDR
Trigger: TCTGTCAGAAATGTTGGACAAAGTGTAGTTAAGAGA...AACTCTTACTAAAGAATAGCATACTGCATCTTTAAGCAGTAGAGGGTAAACTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000618556.4
CDS GCA 72 bp CGGTGCAGCTGTACTCGCGCTCCAGGCTCCTGCTGCTaGCGCTCATCAACCTGCTCAGCATCTTCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: RCSCTRAPGSCC*RSSTCSASSRP
Trigger: CGGGCGGGAAGATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS GCA 72 bp GCACGGTGCAGCTGTACTCGCGCTCCAGGCTCCTGCTaGTGCCGCTCATCAACCTGCTCAGCATCTTCCCGC +
Preference number: 6 (lower is better)
Translates to: ARCSCTRAPGSC*CRSSTCSASSR
Trigger: GCGGGAAGATGCTGAGCAGGTTGATGAGCGGCAGCAGCAGGAGCCTGGAGCGCGAGTACAGCTGCACCGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000421674.5
ENST00000451277.5
CDS TCA 72 bp ATCCTCAGGATGCGCACACTTAGGGGCCGAAAGCAGTaGTTAGTCAGCCGGAGCTGGACCCGGACTCTGGTG +
Preference number: 6 (lower is better)
Translates to: ILRMRTLRGRKQ*LVSRSWTRTLV
Trigger: CACCAGAGTCCGGGTCCAGCTCCGGCTGACTAATCACTGCTTTCGGCCCCTAAGTGTGCGCATCCTGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636859.1
CDS TCA 72 bp TCCCGTAAGGACTCTAGGCCTTGGAAATGCTCCAGCTaGTTCCCTTGCCCGGGGGTCACAGCAGTCAGGACC +
Preference number: 6 (lower is better)
Translates to: SRKDSRPWKCSS*FPCPGVTAVRT
Trigger: GGTCCTGACTGCTGTGACCCCCGGGCAAGGGAATCAGCTGGAGCATTTCCAAGGCCTAGAGTCCTTACGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636859.1
CDS CCA 72 bp GTGTCCCCATGGGAAGTGGAACGCACTGGTGTGGAATaGGCACTGTCCCGTAAGGACTCTAGGCCTTGGAAA +
Preference number: 6 (lower is better)
Translates to: VSPWEVERTGVE*ALSRKDSRPWK
Trigger: TTTCCAAGGCCTAGAGTCCTTACGGGACAGTGCCCATTCCACACCAGTGCGTTCCACTTCCCATGGGGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636859.1
CDS CAA 72 bp CCTGGCCACTTCCAAGCCCCAAATCGCTGGGACTTGTaGCTAAATCTTTACCTCACGTCCCCTAGAACCGCC +
Preference number: 6 (lower is better)
Translates to: PGHFQAPNRWDL*LNLYLTSPRTA
Trigger: GGCGGTTCTAGGGGACGTGAGGTAAAGATTTAGCAACAAGTCCCAGCGATTTGGGGCTTGGAAGTGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS CAA 90 bp TCGCCGATTCTTCCTGGCCACTTCCAAGCCCCAAATCGCTGGGACTaGTTGCTAAATCTTTACCTCACGTCCCCTAGAACCGCCCAACAC +
Preference number: 6 (lower is better)
Translates to: SPILPGHFQAPNRWD*LLNLYLTSPRTAQH
Trigger: GTGTTGGGCGGTTCTAGGGGACGTGAGGTAAAGATTTAGCAACAAGTCCCAGCGATTTGGGGCTTGGAAGTGGCCAGGAAGAATCGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS CCA 72 bp CCGATTCTTCCTGGCCACTTCCAAGCCCCAAATCGCTaGGACTTGTTGCTAAATCTTTACCTCACGTCCCCT +
Preference number: 6 (lower is better)
Translates to: PILPGHFQAPNR*DLLLNLYLTSP
Trigger: AGGGGACGTGAGGTAAAGATTTAGCAACAAGTCCCAGCGATTTGGGGCTTGGAAGTGGCCAGGAAGAATCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS CCA 72 bp CCCCATGGTGGCCCAGGAAGGCAAATACTTCTTCAGTaGAAACCAGCTGATCTCTTCAGAGAAACCAGCCAG +
Preference number: 6 (lower is better)
Translates to: PHGGPGRQILLQ*KPADLFRETSQ
Trigger: CTGGCTGGTTTCTCTGAAGAGATCAGCTGGTTTCCACTGAAGAAGTATTTGCCTTCCTGGGCCACCATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636859.1
CDS CAA 72 bp CTTCCTGGCCACTTCCAAGCCCCAAATCGCTGGGACTaGTTGCTAAATCTTTACCTCACGTCCCCTAGAACC +
Preference number: 6 (lower is better)
Translates to: LPGHFQAPNRWD*LLNLYLTSPRT
Trigger: GGTTCTAGGGGACGTGAGGTAAAGATTTAGCAACAAGTCCCAGCGATTTGGGGCTTGGAAGTGGCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS CAA 90 bp CCGATTCTTCCTGGCCACTTCCAAGCCCCAAATCGCTGGGACTTGTaGCTAAATCTTTACCTCACGTCCCCTAGAACCGCCCAACACAAT +
Preference number: 6 (lower is better)
Translates to: PILPGHFQAPNRWDL*LNLYLTSPRTAQHN
Trigger: ATTGTGTTGGGCGGTTCTAGGGGACGTGAGGTAAAGATTTAGCAACAAGTCCCAGCGATTTGGGGCTTGGAAGTGGCCAGGAAGAATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS TCA 72 bp TGCAGTCTCCAACCAGGGGGTCTTACCTTACATGGGTaGGGATCCACTCCATATGTTTCCAATGTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: CSLQPGGLTLHG*GSTPYVSNVCA
Trigger: AGCACAGACATTGGAAACATATGGAGTGGATCCTCACCCATGTAAGGTAAGACCCCCTGGTTGGAGACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479319.1
CDS GCA 72 bp GCAAAGATGGAAAGCCAACTAGGAACAAAGGATTTCTaGAGATCCCACATCATAGCAGCCCCTTGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: AKMESQLGTKDF*RSHIIAAPWQC
Trigger: GCACTGCCAAGGGGCTGCTATGATGTGGGATCTGCAGAAATCCTTTGTTCCTAGTTGGCTTTCCATCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636859.1
CDS CAA 72 bp AGGTACTGGCCTTTGGCATCTCTTATGTATTTCTTGTaGCTAATTCCCTTGGGTGCCTCTGGATTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RYWPLASLMYFL*LIPLGASGFQA
Trigger: GGCCTGGAATCCAGAGGCACCCAAGGGAATTAGCAACAAGAAATACATAAGAGATGCCAAAGGCCAGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS TCA 72 bp AGAGTGACCAGTTCAAGAGGTAGTATTCACACTTCTTaGAGGAAAGAAGTCCACTCTGTTGCGACTGCACTG +
Preference number: 6 (lower is better)
Translates to: RVTSSRGSIHTS*RKEVHSVATAL
Trigger: CAGTGCAGTCGCAACAGAGTGGACTTCTTTCCTTCAAGAAGTGTGAATACTACCTCTTGAACTGGTCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000421674.5
ENST00000458630.5
ENST00000618556.4
CDS TCA 72 bp GTGATCCAGAGGAGTTTTCAAAGCAGGCATTTTCTCTaGTATCTCACTGAAAGTGCCAGCCATGTAAACGTT +
Preference number: 6 (lower is better)
Translates to: VIQRSFQSRHFL*YLTESASHVNV
Trigger: AACGTTTACATGGCTGGCACTTTCAGTGAGATATCAGAGAAAATGCCTGCTTTGAAAACTCCTCTGGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479319.1
CDS GCA 72 bp ATCTCTTATGTATTTCTTGTTGCTAATTCCCTTGGGTaGCTCTGGATTCCAGGCCTCTTACAGATGATTCTG +
Preference number: 6 (lower is better)
Translates to: ISYVFLVANSLG*LWIPGLLQMIL
Trigger: CAGAATCATCTGTAAGAGGCCTGGAATCCAGAGGCACCCAAGGGAATTAGCAACAAGAAATACATAAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484674.5
CDS TCA 72 bp TTTTACAGAGGAGTCGGCCATGGTAGAGATCCCTTTTaGTCTGCAGGAAGACTAAATACCTGGTTATTTCTT +
Preference number: 6 (lower is better)
Translates to: FYRGVGHGRDPF*SAGRLNTWLFL
Trigger: AAGAAATAACCAGGTATTTAGTCTTCCTGCAGATCAAAAGGGATCTCTACCATGGCCGACTCCTCTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000402883.5
ENST00000417257.6
ENST00000449926.5
ENST00000451277.5
ENST00000484674.5
ENST00000558108.6