RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMD4A (Homo sapiens)

Ensembl gene IDs: ENSG00000151474

Ensembl transcript IDs: ENST00000264546.10, ENST00000342409.3, ENST00000357447.7, ENST00000475141.2, ENST00000477221.2, ENST00000492155.5, ENST00000493380.5, ENST00000495956.2, ENST00000632314.1, ENST00000632570.1, ENST00000640906.1, ENST00000648400.1, ENST00000648761.1, ENST00000649099.1, ENST00000649155.1, ENST00000649246.1, ENST00000649423.1, ENST00000649947.1, ENST00000650014.1

Found 814 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCTaGCGGGTCCCGGCCAGGTGTGTGTGTGCCCCAGCTCGACTCTCG +
Preference number: 1 (lower is better)
Translates to: CLERLGGGGHGPPCP*RVPARCVCAPARLS
Trigger: CGAGAGTCGAGCTGGGGCACACACACACCTGGCCGGGACCCGGCAGGGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp TGCATGGAGCTGGGGAAAGCAGGCCCTGAATTGTCTAGAGAGACTTaGTGGAGGAGGCCACGGCCCGCCTTGTCCCTGCCGGGTCCCGGC +
Preference number: 1 (lower is better)
Translates to: CMELGKAGPELSRET*WRRPRPALSLPGPG
Trigger: GCCGGGACCCGGCAGGGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCCTGCTTTCCCCAGCTCCATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp GGCGGTCAGATTAGGCCGGGCTGGCTCACACGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACCACTGGACATCAGCTAGTTCTGGAT +
Preference number: 1 (lower is better)
Translates to: GGQIRPGWLTRGSRA*LFPARTTGHQLVLD
Trigger: ATCCAGAACTAGCTGATGTCCAGTGGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGTGTGAGCCAGCCCGGCCTAATCTGACCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTaGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCG +
Preference number: 1 (lower is better)
Translates to: SWQREATKVPLRIGV*LSMGKSARGHTVGP
Trigger: CGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 90 bp GGGGCTGTCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTaGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGT +
Preference number: 1 (lower is better)
Translates to: GAVMAEGSHQGAIED*CLALYGQERQGTHS
Trigger: ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 90 bp GCCGGGTCCCGGCCAGGTGTGTGTGTGCCCCAGCTCGACTCTCGGTaGTCTCCAGGCTGCAGCAGAAGGAATACCTTGGTATTTGTTTCA +
Preference number: 1 (lower is better)
Translates to: AGSRPGVCVPQLDSR*SPGCSRRNTLVFVS
Trigger: TGAAACAAATACCAAGGTATTCCTTCTGCTGCAGCCTGGAGACCACCGAGAGTCGAGCTGGGGCACACACACACCTGGCCGGGACCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp GGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCCCCTCCGGCCCTaGGGTCAGTCTGTATTCACACCTAAGGGCAAGCTAAGTTGTGAA +
Preference number: 1 (lower is better)
Translates to: GPSSRKGSQQQPLRP*GQSVFTPKGKLSCE
Trigger: TTCACAACTTAGCTTGCCCTTAGGTGTGAATACAGACTGACCCCAGGGCCGGAGGGGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CCA 90 bp ACTGTGGAGGCCAAGCCTGCACTTCCTTCTCCCTGGCAATCCATGTaGCCACACGTTCCCATGATCCGTGGGGCCAGATCATGCTATTCC +
Preference number: 1 (lower is better)
Translates to: TVEAKPALPSPWQSM*PHVPMIRGARSCYS
Trigger: GGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAGGAAGTGCAGGCTTGGCCTCCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR TCA 90 bp ACGACTCCCACAGGTCTCTCTTTGTGTCCAGATGGATGGCGACTGTaGGTCAGCAACGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCA +
Preference number: 1 (lower is better)
Translates to: TTPTGLSLCPDGWRL*VSNASQDFLAFTVA
Trigger: TGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCGTTGCTGACTCACAGTCGCCATCCATCTGGACACAAAGAGAGACCTGTGGGAGTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp GAGTCAGCAACGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTaGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: ESATPAKTSSPLPWH*GSFSGSLRREKWAS
Trigger: ACTGGCCCACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCGTTGCTGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR TCA 90 bp GAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTaGATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTTCCC +
Preference number: 1 (lower is better)
Translates to: EVLGWPTYGWQAGHS*IVFLGHPVTQVPFP
Trigger: GGGAAAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 90 bp TTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTaGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAG +
Preference number: 1 (lower is better)
Translates to: LVSGSLWARAPGDTQ*DRNLPECLLSQVFK
Trigger: CTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 90 bp GACTGTGAGTCAGCAACGCCAGCCAAGACTTCCTCGCCTTTACCGTaGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTGG +
Preference number: 1 (lower is better)
Translates to: DCESATPAKTSSPLP*HWGSFSGSLRREKW
Trigger: CCACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCGTTGCTGACTCACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp AACAGTACCCTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATaGATGGCGACTGTGAGTCAGCAACGCCAGCCAAGACTTCCTCGC +
Preference number: 1 (lower is better)
Translates to: NSTLYDSHRSLFVSR*MATVSQQRQPRLPR
Trigger: GCGAGGAAGTCTTGGCTGGCGTTGCTGACTCACAGTCGCCATCCATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAGGGTACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp ATCCCTTCTGCACCCTGGAATCACCAGTCCAGCCATGCATGGAGCTaGGGAAAGCAGGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: IPSAPWNHQSSHAWS*GKQALNCLERLGGG
Trigger: TCCTCCACCAAGTCTCTCTAGACAATTCAGGGCCTGCTTTCCCCAGCTCCATGCATGGCTGGACTGGTGATTCCAGGGTGCAGAAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp TCCTTCTCCCTGGCAATCCATGTGGCCACACGTTCCCATGATCCGTaGGGCCAGATCATGCTATTCCCAGTTCACATTCCATCCCGTCAG +
Preference number: 1 (lower is better)
Translates to: SFSLAIHVATRSHDP*GQIMLFPVHIPSRQ
Trigger: CTGACGGGATGGAATGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR TCA 90 bp CTGCACTTCCTTCTCCCTGGCAATCCATGTGGCCACACGTTCCCATaGTCCGTGGGGCCAGATCATGCTATTCCCAGTTCACATTCCATC +
Preference number: 1 (lower is better)
Translates to: LHFLLPGNPCGHTFP*SVGPDHAIPSSHSI
Trigger: GATGGAATGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAGGAAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR CCA 90 bp ACAAGCTGGCATTCCAGAAGCTCATTAGGGGGCCATGAATTACTGTaGAGGCCAAGCCTGCACTTCCTTCTCCCTGGCAATCCATGTGGC +
Preference number: 1 (lower is better)
Translates to: TSWHSRSSLGGHELL*RPSLHFLLPGNPCG
Trigger: GCCACATGGATTGCCAGGGAGAAGGAAGTGCAGGCTTGGCCTCCACAGTAATTCATGGCCCCCTAATGAGCTTCTGGAATGCCAGCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR TCA 90 bp GGGCTCTTACTGTCTCCATTCGGTTTTGTCTTAGATAAAGGGAACTaGGTCCTTAGGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCC +
Preference number: 1 (lower is better)
Translates to: GLLLSPFGFVLDKGN*VLRPLQQERLTTAA
Trigger: GGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCCTAAGGACTCAGTTCCCTTTATCTAAGACAAAACCGAATGGAGACAGTAAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR TCA 90 bp AATTCAGCCAACAAGCTGGCATTCCAGAAGCTCATTAGGGGGCCATaGATTACTGTGGAGGCCAAGCCTGCACTTCCTTCTCCCTGGCAA +
Preference number: 1 (lower is better)
Translates to: NSANKLAFQKLIRGP*ITVEAKPALPSPWQ
Trigger: TTGCCAGGGAGAAGGAAGTGCAGGCTTGGCCTCCACAGTAATTCATGGCCCCCTAATGAGCTTCTGGAATGCCAGCTTGTTGGCTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR GCA 90 bp TTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGAAGTaGTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAA +
Preference number: 1 (lower is better)
Translates to: FRCKLNMPRGLLFMK*LVGLRMGGRLDTAE
Trigger: TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR TCA 90 bp ACCAAACCTGAAGCACTGAGAGGTTGGGTAACCAGCTCTGGTCACTaGGTTGGTGAGGGATGGATTCAGAAGAGGTCTCCAATTGTGACA +
Preference number: 1 (lower is better)
Translates to: TKPEALRGWVTSSGH*VGEGWIQKRSPIVT
Trigger: TGTCACAATTGGAGACCTCTTCTGAATCCATCCCTCACCAACTCAGTGACCAGAGCTGGTTACCCAACCTCTCAGTGCTTCAGGTTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR GCA 90 bp GTCCCGGTTATAGCTGTGGTTAGTGTCCACCGATGGATGAGGAGATaGTTCCGGCAGATTGCTCTCTTAGCCACAATTCCCTCATTTATG +
Preference number: 1 (lower is better)
Translates to: VPVIAVVSVHRWMRR*FRQIALLATIPSFM
Trigger: CATAAATGAGGGAATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGACACTAACCACAGCTATAACCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CCA 90 bp GTGTCTCTAGTTGTCCCGGTTATAGCTGTGGTTAGTGTCCACCGATaGATGAGGAGATGCTTCCGGCAGATTGCTCTCTTAGCCACAATT +
Preference number: 1 (lower is better)
Translates to: VSLVVPVIAVVSVHR*MRRCFRQIALLATI
Trigger: AATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGACACTAACCACAGCTATAACCGGGACAACTAGAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR TCA 90 bp AGAGAACCACTTTTGGCCATTATCACCTTACGTTACTACAAATCCTaGAAGGAAAGCAGCTTTGAGTCTTGGGCTCGGCTGAACCCCCTG +
Preference number: 1 (lower is better)
Translates to: REPLLAIITLRYYKS*KESSFESWARLNPL
Trigger: CAGGGGGTTCAGCCGAGCCCAAGACTCAAAGCTGCTTTCCTTTCAGGATTTGTAGTAACGTAAGGTGATAATGGCCAAAAGTGGTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR TCA 90 bp ATTAACAGAAAGACAGGATTCCTCACCTGGAAACACAGAAAATGCTaGCTGGTTCAGAGGGGAGCTAACTTCAGGAGCGAATCCAAAGTG +
Preference number: 1 (lower is better)
Translates to: INRKTGFLTWKHRKC*LVQRGANFRSESKV
Trigger: CACTTTGGATTCGCTCCTGAAGTTAGCTCCCCTCTGAACCAGTCAGCATTTTCTGTGTTTCCAGGTGAGGAATCCTGTCTTTCTGTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR GCA 90 bp TTATTTTTAATCTTTGGCAGCATAGAACTGATTGTGGTCCTCCGATaGATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCTTCCC +
Preference number: 1 (lower is better)
Translates to: LFLIFGSIELIVVLR*ISGVENFLSQPPLP
Trigger: GGGAAGGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAATCAGTTCTATGCTGCCAAAGATTAAAAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 90 bp GTCAAATTGTTGAGCTTTGATATGCTGTCAGAGAAAGCACTGGCTTaGGACTCAGAGGACCGAGATTTTGAGAACTTGCTTCATCAGTTT +
Preference number: 1 (lower is better)
Translates to: VKLLSFDMLSEKALA*DSEDRDFENLLHQF
Trigger: AAACTGATGAAGCAAGTTCTCAAAATCTCGGTCCTCTGAGTCCCAAGCCAGTGCTTTCTCTGACAGCATATCAAAGCTCAACAATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR TCA 90 bp TGCATAATCTTCTCACCAACTCTACGACTGTTGCATTCTAGAGATTaGAAACATCAAACCAAACCTGAAGCACTGAGAGGTTGGGTAACC +
Preference number: 1 (lower is better)
Translates to: CIIFSPTLRLLHSRD*KHQTKPEALRGWVT
Trigger: GGTTACCCAACCTCTCAGTGCTTCAGGTTTGGTTTGATGTTTTCAATCTCTAGAATGCAACAGTCGTAGAGTTGGTGAGAAGATTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CCA 90 bp CCTGGCTCACAACATAGTCTGATGTATGTGTTTTCACCAGTCTTCTaGCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATA +
Preference number: 1 (lower is better)
Translates to: PGSQHSLMYVFSPVF*LKQAISFTHPKNPI
Trigger: TATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGCCAGAAGACTGGTGAAAACACATACATCAGACTATGTTGTGAGCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR TCA 90 bp GAATTTTTGCCTCTCATTCCTTGCAACTCCAGTGGGCTAGAATCTTaGTCCAGTTTTCTCCAGACTAGATTTCAAGCTACTATGCATGAT +
Preference number: 1 (lower is better)
Translates to: EFLPLIPCNSSGLES*SSFLQTRFQATMHD
Trigger: ATCATGCATAGTAGCTTGAAATCTAGTCTGGAGAAAACTGGATCAAGATTCTAGCCCACTGGAGTTGCAAGGAATGAGAGGCAAAAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR CCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCCAGGGGACACACAGTaGGACCGGAACCTTCCAGAA +
Preference number: 2 (lower is better)
Translates to: GPELSRETWWRRPRPALSPGDTQ*DRNLPE
Trigger: TTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGG...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR TCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCATCTCAGAATGGCGTTaGGGCGGTCAGATTAGGCCG +
Preference number: 2 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPISEWR*GGQIRP
Trigger: CGGCCTAATCTGACCGCCTCAACGCCATTCTGAGAT...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR-3UTR CCA 90 bp TTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGACAGGCGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACC +
Preference number: 2 (lower is better)
Translates to: FQNVSSVRFSRGRECGDRRGSRA*LFPART
Trigger: GGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCG...CCTGTCTCCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR TCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCATCTCAGAATGGCGTTaGGGCGGTCAGATTAGGCCG +
Preference number: 2 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSISEWR*GGQIRP
Trigger: CGGCCTAATCTGACCGCCTCAACGCCATTCTGAGAT...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR-3UTR TCA 90 bp GGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTAAAGCTGGTGCAGGGTaGCGGTGCGTCTGGGTAAGG +
Preference number: 2 (lower is better)
Translates to: GWTQLNRLSGSPCNSSPLKAGAG*RCVWVR
Trigger: CCTTACCCAGACGCACCGTCACCCTGCACCAGCTTT...AAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR-3UTR TCA 90 bp CGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCCACCAAGGTGCCATTaGGGATTGGTGTCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: RQPRLPRLYRGIGAVFQAPPRCH*GLVSGS
Trigger: AGAGCCAGACACCAATCCTCAATGGCACCTTGGTGG...AGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR CCA 90 bp GAGCCCCTGCCTCGATCACTAAAACACTTCTGGAACCTTCCGTGGAGACTGAATCAGCCCCTCCGGCCCTaGGGTCAGTCTGTATTCACA +
Preference number: 2 (lower is better)
Translates to: EPLPRSLKHFWNLPWRLNQPLRP*GQSVFT
Trigger: TGTGAATACAGACTGACCCCAGGGCCGGAGGGGCTG...ATTCAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGATCGAGGCAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CAA 90 bp GATTCAGAAGAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTaGGCCACTACACTCTACCAGCTCTGCAAGAAGGTGAGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: DSEEVSNCDTAEDLL*ATTLYQLCKKVREG
Trigger: TCCCTCCCTCACCTTCTTGCAGAGCTGGTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTCTTCTGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR GCA 90 bp GAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTTGGCCACTACACTCTACCGATGGATGAGGAGATaGTTCCGGCAGATTGCTCTC +
Preference number: 2 (lower is better)
Translates to: EVSNCDTAEDLLLATTLYRWMRR*FRQIAL
Trigger: GAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCG...GTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR CCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTTCCTGCCCGTACCACTaGACATCAGCTAGTTCTGGA +
Preference number: 2 (lower is better)
Translates to: SWQREATKVPLRIGVWLSSCPYH*TSASSG
Trigger: TCCAGAACTAGCTGATGTCCAGTGGTACGGGCAGGA...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CAA 90 bp AGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGAAGTGCTaGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCG +
Preference number: 2 (lower is better)
Translates to: RCKLNMPRGLLFMKC*VGLRMGGRLDTAES
Trigger: CGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR-3UTR GCA 90 bp GGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTGGCTTGGCTTTTTCCTaGCCGTACCACTGGACATCA +
Preference number: 2 (lower is better)
Translates to: GWTQLNRLSGSPCNSSPLGLAFS*PYHWTS
Trigger: TGATGTCCAGTGGTACGGGCAGGAAAAAGCCAAGCC...AAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR CCA 90 bp GGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTGGTGCCATTGAGGATTaGTGTCTGGCTCTCTATGGG +
Preference number: 2 (lower is better)
Translates to: GWTQLNRLSGSPCNSSPLGAIED*CLALYG
Trigger: CCCATAGAGAGCCAGACACCAATCCTCAATGGCACC...AAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR-3UTR TCA 90 bp AGTGATTTCTCTTCCCAGACAGCTGCGCTTACAAACAAACTGCTAGGTAGCAGTGGCCACACGTTCCCATaGTCCGTGGGGCCAGATCAT +
Preference number: 2 (lower is better)
Translates to: SDFSSQTAALTNKLLGSSGHTFP*SVGPDH
Trigger: ATGATCTGGCCCCACGGATCATGGGAACGTGTGGCC...ACTGCTACCTAGCAGTTTGTTTGTAAGCGCAGCTGTCTGGGAAGAGAAATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR-3UTR CCA 90 bp ATACCACCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCCAGATTAGGCCGGGCTaGCTCACACGAGGGTCCCGG +
Preference number: 2 (lower is better)
Translates to: IPPLRKPFCAILNNPTKVQIRPG*LTRGSR
Trigger: CCGGGACCCTCGTGTGAGCCAGCCCGGCCTAATCTG...GACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGGTGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR CCA 90 bp CTCCGGCCCTGGGGTCAGTCTGTATTCACACCTAAGGGCAAGCTAAGTTGTGAACAATTCCCTCATTTATaGCAGCAAAGCAGGCCAACG +
Preference number: 2 (lower is better)
Translates to: LRPWGQSVFTPKGKLSCEQFPHL*QQSRPT
Trigger: CGTTGGCCTGCTTTGCTGCCATAAATGAGGGAATTG...TTCACAACTTAGCTTGCCCTTAGGTGTGAATACAGACTGACCCCAGGGCCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR TCA 90 bp GAGAGAAGTGGGCCAGTAAGGGAGAGGGCTAGAGAGAGGACACCAGTTTACATAATTTCAGGTGTAAACTaGATATGCCACGAGGCCTCC +
Preference number: 2 (lower is better)
Translates to: ERSGPVRERARERTPVYIISGVN*ICHEAS
Trigger: GGAGGCCTCGTGGCATATTCAGTTTACACCTGAAAT...TATGTAAACTGGTGTCCTCTCTCTAGCCCTCTCCCTTACTGGCCCACTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR TCA 90 bp CTAGTTGTCCCGGTTATAGCTGTGGTTAGTGTCCACCGATGGATGAGGAGATGCCAGAAAATCTTGGAATaGGCATCATCCTGCAACCCC +
Preference number: 2 (lower is better)
Translates to: LVVPVIAVVSVHRWMRRCQKILE*ASSCNP
Trigger: GGGGTTGCAGGATGATGCTCATTCCAAGATTTTCTG...GCATCTCCTCATCCATCGGTGGACACTAACCACAGCTATAACCGGGACAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR TCA 90 bp CCGAAATGGCATCATAACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGCCTTGCAGCTTTCCCTaGACTCACACGCCCTCAACA +
Preference number: 2 (lower is better)
Translates to: PKWHHNTLEAPWLFILILPCSFP*THTPST
Trigger: TGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGCAAGG...CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR-3UTR CCA 90 bp GCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATAGCTGAGGGCCAAAGCTaGTGCAGGGTGACGGTGCGT +
Preference number: 2 (lower is better)
Translates to: AETGNFFYASEESNRGFIAEGQS*CRVTVR
Trigger: ACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC...TATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR GCA 90 bp TCCGTGGAGACTGAATCTGTAAGATCCTTGTCACAAGCACCTCAGGTAATTTTGACACCGCAGAGGACCTaGTCTTGGCCACTACACTCT +
Preference number: 2 (lower is better)
Translates to: SVETESVRSLSQAPQVILTPQRT*SWPLHS
Trigger: AGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGT...CAAAATTACCTGAGGTGCTTGTGACAAGGATCTTACAGATTCAGTCTCCACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR GCA 90 bp GTAGAGCCCCTGCCTCGATCACTAAAACACTTCTGGAACCTTCCGTGGAGACTGTTTCCTCAGCACAGCTaGATAATCTTCTCACCAACT +
Preference number: 2 (lower is better)
Translates to: VEPLPRSLKHFWNLPWRLFPQHS*IIFSPT
Trigger: AGTTGGTGAGAAGATTATGCAGCTGTGCTGAGGAAA...CAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGATCGAGGCAGGGGCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR GCA 90 bp TCTTCCCAGACAGCTGCGCTTACAAACAAACTGCTAGGTAGCAGTAGCACTTTGCGTGGGGCCAGATCATaGTATTCCCAGTTCACATTC +
Preference number: 2 (lower is better)
Translates to: SSQTAALTNKLLGSSSTLRGARS*YSQFTF
Trigger: GAATGTGAACTGGGAATAGCATGATCTGGCCCCACG...CAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAGCGCAGCTGTCTGGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR-3UTR CCA 90 bp AAATGGAGCACAACCCGGATCCTTTGTTTCTTTGAATTCAGCCAACAAGCTGGCCGTTCCCATGATCCGTaGGGCCAGATCATGCTATTC +
Preference number: 2 (lower is better)
Translates to: KWSTTRILCFFEFSQQAGRSHDP*GQIMLF
Trigger: GAATAGCATGATCTGGCCCCACGGATCATGGGAACG...GCCAGCTTGTTGGCTGAATTCAAAGAAACAAAGGATCCGGGTTGTGCTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR-3UTR CCA 90 bp AAATGGAGCACAACCCGGATCCTTTGTTTCTTTGAATTCAGCCAACAAGCTGGCGGCCATGAATTACTGTaGAGGCCAAGCCTGCACTTC +
Preference number: 2 (lower is better)
Translates to: KWSTTRILCFFEFSQQAGGHELL*RPSLHF
Trigger: GAAGTGCAGGCTTGGCCTCCACAGTAATTCATGGCC...GCCAGCTTGTTGGCTGAATTCAAAGAAACAAAGGATCCGGGTTGTGCTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR-3UTR TCA 90 bp GAGCCCCTGCCTCGATCACTAAAACACTTCTGGAACCTTCCGTGGAGACTGAATCAAGTGGATCACACTTaGAAAAAGGCCATTGTAGTG +
Preference number: 2 (lower is better)
Translates to: EPLPRSLKHFWNLPWRLNQVDHT*KKAIVV
Trigger: CACTACAATGGCCTTTTTTCAAGTGTGATCCACTTG...ATTCAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGATCGAGGCAGGGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR TCA 90 bp CTTACAAACAAACTGCTAGGTAGCAGTAGCACTTTGACAAATGGAGCACAACCCCTCATTAGGGGGCCATaGATTACTGTGGAGGCCAAG +
Preference number: 2 (lower is better)
Translates to: LTNKLLGSSSTLTNGAQPLIRGP*ITVEAK
Trigger: CTTGGCCTCCACAGTAATTCATGGCCCCCTAATGAG...GGGTTGTGCTCCATTTGTCAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR CAA 90 bp AGTAGCACTTTGACAAATGGAGCACAACCCGGATCCTTTGTTTCTTaGAATTCAGCCAACAAGCTGGCATTCCAGAAGCTCATTAGGGGG +
Preference number: 2 (lower is better)
Translates to: SSTLTNGAQPGSFVS*NSANKLAFQKLIRG
Trigger: CCCCCTAATGAGCTTCTGGAATGCCAGCTTGTTGGCTGAATTCAAAGAAACAAAGGATCCGGGTTGTGCTCCATTTGTCAAAGTGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR-3UTR TCA 90 bp GGAGCTAACTTCAGGAGCGAATCCAAAGTGTTAGAAGGTCCTAGAAGTCAAATTCACGCCCTCAACAAATaGCACGTAGCCAAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: GANFRSESKVLEGPRSQIHALNK*HVAKSF
Trigger: GAAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTG...AATTTGACTTCTAGGACCTTCTAACACTTTGGATTCGCTCCTGAAGTTAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR-3UTR CCA 90 bp GGAGCTAACTTCAGGAGCGAATCCAAAGTGTTAGAAGGTCCTAGAAGTCAAATTGAGAAAGCACTGGCTTaGGACTCAGAGGACCGAGAT +
Preference number: 2 (lower is better)
Translates to: GANFRSESKVLEGPRSQIEKALA*DSEDRD
Trigger: ATCTCGGTCCTCTGAGTCCCAAGCCAGTGCTTTCTC...AATTTGACTTCTAGGACCTTCTAACACTTTGGATTCGCTCCTGAAGTTAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR-3UTR TCA 90 bp CCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCGTGCACGAGGCCTTTGAAGATTaGTGGCTTTCCAGTTGTGTT +
Preference number: 2 (lower is better)
Translates to: PLRKPFCAILNNPTKVVHEAFED*WLSSCV
Trigger: AACACAACTGGAAAGCCATCAATCTTCAAAGGCCTC...GTGCACGACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR CCA 90 bp TCTTCTCACCAACTCTACGACTGTTGCATTCTAGAGATTGAAAACATCAAACCACAGAGGACCTGCTCTTaGCCACTACACTCTACCAGC +
Preference number: 2 (lower is better)
Translates to: SSHQLYDCCILEIENIKPQRTCS*PLHSTS
Trigger: GCTGGTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTG...TGGTTTGATGTTTTCAATCTCTAGAATGCAACAGTCGTAGAGTTGGTGAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CAA 90 bp AAAACACTTCTGGAACCTTCCGTGGAGACTGAATCTGTAAGATCCTaGTCACAAGCACCTCAGGTAATTTTGGTGCAAGTGGATCACACT +
Preference number: 2 (lower is better)
Translates to: KTLLEPSVETESVRS*SQAPQVILVQVDHT
Trigger: AGTGTGATCCACTTGCACCAAAATTACCTGAGGTGCTTGTGACAAGGATCTTACAGATTCAGTCTCCACGGAAGGTTCCAGAAGTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CAA 90 bp CAGACAGCTGCGCTTACAAACAAACTGCTAGGTAGCAGTAGCACTTaGACAAATGGAGCACAACCCGGATCCTTTGTTTCTTTGAATTCA +
Preference number: 2 (lower is better)
Translates to: QTAALTNKLLGSSST*TNGAQPGSFVSLNS
Trigger: TGAATTCAAAGAAACAAAGGATCCGGGTTGTGCTCCATTTGTCAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAGCGCAGCTGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR-3UTR GCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATTTGCCTCTCATTCCTTaGAACTCCAGTGGGCTAGAA +
Preference number: 2 (lower is better)
Translates to: EESNRGFISDQGLRISPYLPLIP*NSSGLE
Trigger: TTCTAGCCCACTGGAGTTGCAAGGAATGAGAGGCAA...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR TCA 90 bp GCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATCAGACCAAGCTCTGTCCCCCAAGTTaGAAATATAACCCAAATCTT +
Preference number: 2 (lower is better)
Translates to: AISFTHPKNPIGALYQTKLCPPS*KYNPNL
Trigger: AAGATTTGGGTTATATTTTCAACTTGGGGGACAGAG...CTTGGTCTGATATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR-3UTR CCA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCACACTTAAAGCGTTCTaGGAATATGAATCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: TKISPSESLESFNNVTGITLKAF*EYESLL
Trigger: CAGAAGGGATTCATATTCCCAGAACGCTTTAAGTGT...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp CGGCCAGGTGTGTGTGTGCCCCAGCTCGACTCTCGGTaGTCTCCAGGCTGCAGCAGAAGGAATACCTTGGTA +
Preference number: 3 (lower is better)
Translates to: RPGVCVPQLDSR*SPGCSRRNTLV
Trigger: TACCAAGGTATTCCTTCTGCTGCAGCCTGGAGACCACCGAGAGTCGAGCTGGGGCACACACACACCTGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp GGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTaGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAG +
Preference number: 3 (lower is better)
Translates to: GSLWARAPGDTQ*DRNLPECLLSQ
Trigger: CTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 72 bp ATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTaGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: MAEGSHQGAIED*CLALYGQERQG
Trigger: CCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 72 bp GCCAAGCCTGCACTTCCTTCTCCCTGGCAATCCATGTaGCCACACGTTCCCATGATCCGTGGGGCCAGATCA +
Preference number: 3 (lower is better)
Translates to: AKPALPSPWQSM*PHVPMIRGARS
Trigger: TGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAGGAAGTGCAGGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR CCA 72 bp AGTAGGCCAGGGAAGGGTGCTCCTTCAGGGCTTGGGTaGGAAGGGCTGGCAGCTTCTTCAAGTCACTCCTCA +
Preference number: 3 (lower is better)
Translates to: SRPGKGAPSGLG*EGLAASSSHSS
Trigger: TGAGGAGTGACTTGAAGAAGCTGCCAGCCCTTCCCACCCAAGCCCTGAAGGAGCACCCTTCCCTGGCCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR TCA 72 bp GGCTGTCATGGCAGAGGGAAGCCACCAAGGTGCCATTaGGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCG +
Preference number: 3 (lower is better)
Translates to: GCHGRGKPPRCH*GLVSGSLWARA
Trigger: CGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 72 bp AGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTaGCTCTCTATGGGCAAGAGCGCCAGGGGACACACA +
Preference number: 3 (lower is better)
Translates to: REATKVPLRIGV*LSMGKSARGHT
Trigger: TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 72 bp AGCAGGAAAGGCTCACAACAGCAGCCCCTCCGGCCCTaGGGTCAGTCTGTATTCACACCTAAGGGCAAGCTA +
Preference number: 3 (lower is better)
Translates to: SRKGSQQQPLRP*GQSVFTPKGKL
Trigger: TAGCTTGCCCTTAGGTGTGAATACAGACTGACCCCAGGGCCGGAGGGGCTGCTGTTGTGAGCCTTTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR CAA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAAGCCACCAAGGTGCCATaGAGGATTGGTGTCTGGCTC +
Preference number: 3 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAEATKVP*RIGVWL
Trigger: GAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR TCA 72 bp GTGACGGTGCGTCTGGGTAAGGCAAATGAGAGGCAGTaGGGTGATCTCAGAATGGCGTTGAGGCGGTCAGAT +
Preference number: 3 (lower is better)
Translates to: VTVRLGKANERQ*GDLRMALRRSD
Trigger: ATCTGACCGCCTCAACGCCATTCTGAGATCACCTCACTGCCTCTCATTTGCCTTACCCAGACGCACCGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR TCA 72 bp GGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTaGATCGTCTTTCTGGGTCACCCTGTAACTCAAGTC +
Preference number: 3 (lower is better)
Translates to: GWPTYGWQAGHS*IVFLGHPVTQV
Trigger: GACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR TCA 72 bp CTTCTCCCTGGCAATCCATGTGGCCACACGTTCCCATaGTCCGTGGGGCCAGATCATGCTATTCCCAGTTCA +
Preference number: 3 (lower is better)
Translates to: LLPGNPCGHTFP*SVGPDHAIPSS
Trigger: TGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR GCA 72 bp TGGCCACACGTTCCCATGATCCGTGGGGCCAGATCATaGTATTCCCAGTTCACATTCCATCCCGTCAGGGTA +
Preference number: 3 (lower is better)
Translates to: WPHVPMIRGARS*YSQFTFHPVRV
Trigger: TACCCTGACGGGATGGAATGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR CCA 72 bp ACGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTaGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAG +
Preference number: 3 (lower is better)
Translates to: TPAKTSSPLPWH*GSFSGSLRREK
Trigger: CTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp TCAGCAACGCCAGCCAAGACTTCCTCGCCTTTACCGTaGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGA +
Preference number: 3 (lower is better)
Translates to: SATPAKTSSPLP*HWGSFSGSLRR
Trigger: TCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCGTTGCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp CTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATaGATGGCGACTGTGAGTCAGCAACGCCAGCCAAGA +
Preference number: 3 (lower is better)
Translates to: LYDSHRSLFVSR*MATVSQQRQPR
Trigger: TCTTGGCTGGCGTTGCTGACTCACAGTCGCCATCCATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp GCACCCTGGAATCACCAGTCCAGCCATGCATGGAGCTaGGGAAAGCAGGCCCTGAATTGTCTAGAGAGACTT +
Preference number: 3 (lower is better)
Translates to: APWNHQSSHAWS*GKQALNCLERL
Trigger: AAGTCTCTCTAGACAATTCAGGGCCTGCTTTCCCCAGCTCCATGCATGGCTGGACTGGTGATTCCAGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR GCA 72 bp AAACTGAATATGCCACGAGGCCTCCTCTTCATGAAGTaGTTGGTTGGCCTACGTATGGGTGGCAGGCTGGAC +
Preference number: 3 (lower is better)
Translates to: KLNMPRGLLFMK*LVGLRMGGRLD
Trigger: GTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGGAGGCCTCGTGGCATATTCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR GCA 72 bp CAGAAGAGGTCTCCAATTGTGACACCGCAGAGGACCTaGTCTTGGCCACTACACTCTACCAGCTCTGCAAGA +
Preference number: 3 (lower is better)
Translates to: QKRSPIVTPQRT*SWPLHSTSSAR
Trigger: TCTTGCAGAGCTGGTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTCTTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CCA 72 bp CTGGCAATCCATGTGGCCACACGTTCCCATGATCCGTaGGGCCAGATCATGCTATTCCCAGTTCACATTCCA +
Preference number: 3 (lower is better)
Translates to: LAIHVATRSHDP*GQIMLFPVHIP
Trigger: TGGAATGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR TCA 72 bp GAAGCACTGAGAGGTTGGGTAACCAGCTCTGGTCACTaGGTTGGTGAGGGATGGATTCAGAAGAGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: EALRGWVTSSGH*VGEGWIQKRSP
Trigger: TGGAGACCTCTTCTGAATCCATCCCTCACCAACTCAGTGACCAGAGCTGGTTACCCAACCTCTCAGTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR-3UTR CAA 90 bp ATCAAGGAATATTTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTAC +
Preference number: 3 (lower is better)
Translates to: IKEYFRCKLNMPRGLLFMTRVPG*AFSCPY
Trigger: GTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGT...CATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAAATATTCCTTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR TCA 72 bp GAGAGGTTGGGTAACCAGCTCTGGTCACTGAGTTGGTaGGGGATGGATTCAGAAGAGGTCTCCAATTGTGAC +
Preference number: 3 (lower is better)
Translates to: ERLGNQLWSLSW*GMDSEEVSNCD
Trigger: GTCACAATTGGAGACCTCTTCTGAATCCATCCCTCACCAACTCAGTGACCAGAGCTGGTTACCCAACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR TCA 72 bp AACAAGCTGGCATTCCAGAAGCTCATTAGGGGGCCATaGATTACTGTGGAGGCCAAGCCTGCACTTCCTTCT +
Preference number: 3 (lower is better)
Translates to: NKLAFQKLIRGP*ITVEAKPALPS
Trigger: AGAAGGAAGTGCAGGCTTGGCCTCCACAGTAATTCATGGCCCCCTAATGAGCTTCTGGAATGCCAGCTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR GCA 72 bp TGTGTGCCCCAGCTCGACTCTCGGTGGTCTCCAGGCTaGAGCAGAAGGAATACCTTGGTATTTGTTTCATTT +
Preference number: 3 (lower is better)
Translates to: CVPQLDSRWSPG*SRRNTLVFVSF
Trigger: AAATGAAACAAATACCAAGGTATTCCTTCTGCTGCAGCCTGGAGACCACCGAGAGTCGAGCTGGGGCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR GCA 72 bp TGTCCACCGATGGATGAGGAGATGCTTCCGGCAGATTaGTCTCTTAGCCACAATTCCCTCATTTATGGCAGC +
Preference number: 3 (lower is better)
Translates to: CPPMDEEMLPAD*SLSHNSLIYGS
Trigger: GCTGCCATAAATGAGGGAATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR GCA 72 bp ATAGCTGTGGTTAGTGTCCACCGATGGATGAGGAGATaGTTCCGGCAGATTGCTCTCTTAGCCACAATTCCC +
Preference number: 3 (lower is better)
Translates to: IAVVSVHRWMRR*FRQIALLATIP
Trigger: GGGAATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGACACTAACCACAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CCA 72 bp GTTGTCCCGGTTATAGCTGTGGTTAGTGTCCACCGATaGATGAGGAGATGCTTCCGGCAGATTGCTCTCTTA +
Preference number: 3 (lower is better)
Translates to: VVPVIAVVSVHR*MRRCFRQIALL
Trigger: TAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGACACTAACCACAGCTATAACCGGGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR TCA 72 bp CTGTCTCCATTCGGTTTTGTCTTAGATAAAGGGAACTaGGTCCTTAGGCCCCTCCAGCAGGAAAGGCTCACA +
Preference number: 3 (lower is better)
Translates to: LSPFGFVLDKGN*VLRPLQQERLT
Trigger: TGTGAGCCTTTCCTGCTGGAGGGGCCTAAGGACTCAGTTCCCTTTATCTAAGACAAAACCGAATGGAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR GCA 72 bp GTACACTTAAAGCGTTCTGGGAATATGAATCCCTTCTaGACCCTGGAATCACCAGTCCAGCCATGCATGGAG +
Preference number: 3 (lower is better)
Translates to: VHLKRSGNMNPF*TLESPVQPCME
Trigger: CTCCATGCATGGCTGGACTGGTGATTCCAGGGTGCAGAAGGGATTCATATTCCCAGAACGCTTTAAGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp CAGCATAGAACTGATTGTGGTCCTCCGATGCATTTCTaGTGTCGAGAACTTCCTTTCTCAACCTCCCCTTCC +
Preference number: 3 (lower is better)
Translates to: QHRTDCGPPMHF*CRELPFSTSPS
Trigger: GGAAGGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAATCAGTTCTATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CCA 72 bp CAGGATTCCTCACCTGGAAACACAGAAAATGCTGACTaGTTCAGAGGGGAGCTAACTTCAGGAGCGAATCCA +
Preference number: 3 (lower is better)
Translates to: QDSSPGNTENAD*FRGELTSGANP
Trigger: TGGATTCGCTCCTGAAGTTAGCTCCCCTCTGAACCAGTCAGCATTTTCTGTGTTTCCAGGTGAGGAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR TCA 72 bp CATCACGCAGATCTAACTAAGGTGCAAGGTAAGATTTaGAGTTGGGTCTGTCTGACTGTAGAGCCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: HHADLTKVQGKI*SWVCLTVEPLP
Trigger: AGGCAGGGGCTCTACAGTCAGACAGACCCAACTTCAAATCTTACCTTGCACCTTAGTTAGATCTGCGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR TCA 72 bp AAGACAGGATTCCTCACCTGGAAACACAGAAAATGCTaGCTGGTTCAGAGGGGAGCTAACTTCAGGAGCGAA +
Preference number: 3 (lower is better)
Translates to: KTGFLTWKHRKC*LVQRGANFRSE
Trigger: TTCGCTCCTGAAGTTAGCTCCCCTCTGAACCAGTCAGCATTTTCTGTGTTTCCAGGTGAGGAATCCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR-3UTR CAA 90 bp GACAGGATTCCTCACCTGGAAACACAGAAAATGCTGACTGGTTCAGAGGGGAGCCTAGAAGTCAAATTGTaGAGCTTTGATATGCTGTCA +
Preference number: 3 (lower is better)
Translates to: DRIPHLETQKMLTGSEGSLEVKL*SFDMLS
Trigger: TGACAGCATATCAAAGCTCAACAATTTGACTTCTAG...GCTCCCCTCTGAACCAGTCAGCATTTTCTGTGTTTCCAGGTGAGGAATCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR TCA 72 bp CTTTTGGCCATTATCACCTTACGTTACTACAAATCCTaGAAGGAAAGCAGCTTTGAGTCTTGGGCTCGGCTG +
Preference number: 3 (lower is better)
Translates to: LLAIITLRYYKS*KESSFESWARL
Trigger: CAGCCGAGCCCAAGACTCAAAGCTGCTTTCCTTTCAGGATTTGTAGTAACGTAAGGTGATAATGGCCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR GCA 72 bp ATCTTTGGCAGCATAGAACTGATTGTGGTCCTCCGATaGATTTCTGGTGTCGAGAACTTCCTTTCTCAACCT +
Preference number: 3 (lower is better)
Translates to: IFGSIELIVVLR*ISGVENFLSQP
Trigger: AGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAATCAGTTCTATGCTGCCAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR-3UTR CAA 90 bp GGAGCTAACTTCAGGAGCGAATCCAAAGTGTTAGAAGGTCCTAGAAGTCAAATTGGCATCATAACACCCTaGAAGCCCCTTGGTTATTCA +
Preference number: 3 (lower is better)
Translates to: GANFRSESKVLEGPRSQIGIITP*KPLGYS
Trigger: TGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCC...AATTTGACTTCTAGGACCTTCTAACACTTTGGATTCGCTCCTGAAGTTAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR TCA 72 bp CCTCTCATTCCTTGCAACTCCAGTGGGCTAGAATCTTaGTCCAGTTTTCTCCAGACTAGATTTCAAGCTACT +
Preference number: 3 (lower is better)
Translates to: PLIPCNSSGLES*SSFLQTRFQAT
Trigger: AGTAGCTTGAAATCTAGTCTGGAGAAAACTGGATCAAGATTCTAGCCCACTGGAGTTGCAAGGAATGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR TCA 72 bp GTGTTAGAAGGTCCTAGAAGTCAAATTGTTGAGCTTTaGTATGCTGTCAGAGAAAGCACTGGCTTGGGACTC +
Preference number: 3 (lower is better)
Translates to: VLEGPRSQIVEL*YAVRESTGLGL
Trigger: GAGTCCCAAGCCAGTGCTTTCTCTGACAGCATATCAAAGCTCAACAATTTGACTTCTAGGACCTTCTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR TCA 72 bp GCATACCACCTCTGCGGAAACCTTTTTGTGCCATCTTaGATAACCCAACTAAAGTCGTGCACTTGTTACTAT +
Preference number: 3 (lower is better)
Translates to: AYHLCGNLFVPS*ITQLKSCTCYY
Trigger: ATAGTAACAAGTGCACGACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGGTGGTATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp GAACCGAAATGGCATCATAACACCCTTGAAGCCCCTTaGTTATTCATCCTTATCCTGGCTCTAAAGATAAAC +
Preference number: 3 (lower is better)
Translates to: EPKWHHNTLEAP*LFILILALKIN
Trigger: GTTTATCTTTAGAGCCAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR TCA 72 bp CTTTTCCTGTTGCACACAGTTCAGTCTGACTATCCATaGATCTTCTTTGGGAGAAAGAAAAATGGCCCAATG +
Preference number: 3 (lower is better)
Translates to: LFLLHTVQSDYP*IFFGRKKNGPM
Trigger: CATTGGGCCATTTTTCTTTCTCCCAAAGAAGATTCATGGATAGTCAGACTGAACTGTGTGCAACAGGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR TCA 72 bp TTCTCACCAACTCTACGACTGTTGCATTCTAGAGATTaGAAACATCAAACCAAACCTGAAGCACTGAGAGGT +
Preference number: 3 (lower is better)
Translates to: FSPTLRLLHSRD*KHQTKPEALRG
Trigger: ACCTCTCAGTGCTTCAGGTTTGGTTTGATGTTTTCAATCTCTAGAATGCAACAGTCGTAGAGTTGGTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR GCA 72 bp CCAGACTATCATGATGTTTGTTGGAACTGTAATTCCTaGTCTCCATTTCTCTCTGTCCCCCAAGTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: PDYHDVCWNCNS*SPFLSVPQVEN
Trigger: ATTTTCAACTTGGGGGACAGAGAGAAATGGAGAGCAGGAATTACAGTTCCAACAAACATCATGATAGTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
3UTR CCA 72 bp CAACATAGTCTGATGTATGTGTTTTCACCAGTCTTCTaGCTGAAACAGGCAATTTCTTTTACGCATCCGAAG +
Preference number: 3 (lower is better)
Translates to: QHSLMYVFSPVF*LKQAISFTHPK
Trigger: CTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGCCAGAAGACTGGTGAAAACACATACATCAGACTATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGCTGGCGCAGCTCGTCTaGGACGGCGGCACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQLAQLV*DGGTAR
Trigger: GCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAG...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCGCTGCCGCTGCCTCTaGCTCTGGCGCGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSRCRCL*LWRALD
Trigger: GTCCAAGGCGCGCCAGAGGCAGAGGCAGCGGCAGCG...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCGCCTCTGGCGCGCCTTaGACGGCGAGTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPASGAP*TASPRP
Trigger: TGGCCGAGGACTCGCCGTCCAAGGCGCGCCAGAGGC...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCCGCTGCCTCTGCCTCTaGCGCGCCTTGGACGGCGAG +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPRCLCL*RALDGE
Trigger: CTCGCCGTCCAAGGCGCGCCAGAGGCAGAGGCAGCG...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CTTAGGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCCCCTCCGGCCCTGGGGCAGCCCCTCCGGCCCTaGGGTCAGTCTGTATTCACA +
Preference number: 4 (lower is better)
Translates to: LRPLQQERLTTAAPPALGQPLRP*GQSVFT
Trigger: TGTGAATACAGACTGACCCCAGGGCCGGAGGGGCTG...CCCCAGGGCCGGAGGGGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCCTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGCAGCAGGCCGAGAGCTaGGTCGGGCACCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEQQAES*VGHQLH
Trigger: GTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTG...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGCCGCCAGGTTGGGCATaGTGCCCGAGCTGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEPPGWA*CPSWLS
Trigger: GCTCAGCCAGCTCGGGCAGCATGCCCAACCTGGCGG...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCCAGATTAGGCCGGGCTaGCTCACACGAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPQIRPG*LTRGSR
Trigger: CCGGGACCCTCGTGTGAGCCAGCCCGGCCTAATCTG...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCCGCGCCAGCTCTCCTTaGACAGGCCGCCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSRASSP*TGRPPC
Trigger: ACACGGCGGGCGGCCTGTTCAAGGAGAGCTGGCGCG...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp TCCTTAGGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCCCCTCCGGCCCTGGATGCACGAATCCTGCTaGCGAGTCAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLGPSSRKGSQQQPLRPWMHESC*RVSPPG
Trigger: CCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCAT...CCAGGGCCGGAGGGGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCCTAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp GTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCGGTCGCTCTCCAGGCTaGGCACCACCACGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VGLRMGGRLDTAESSFWVGRSPG*APPRAW
Trigger: CCACGCCCGTGGTGGTGCGCAGCCTGGAGAGCGACC...GACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp TGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCGAGGTGGAGCTGGTGTaGGACAGGCGGCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: WARAPGDTQWDRNLPECLEVELV*DRRLCS
Trigger: GGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTC...GAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPLVTLL*ATKVLW
Trigger: CCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAG...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCCGAGCTCGAGTGGCTaGTGCACGACGAGCAGTCGT +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSPSSSG*CTTSSR
Trigger: ACGACTGCTCGTCGTGCACCAGCCACTCGAGCTCGG...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCGCACCACCACGGGCGTaGCGCCGCCCTCGATGTACA +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAAPPRA*RRPRCT
Trigger: TGTACATCGAGGGCGGCGCCACGCCCGTGGTGGTGC...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCCGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACC +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSRGSRA*LFPART
Trigger: GGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCG...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp TCCTTAGGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCCCCTCCGGCCCTGGGTGAGGGAGGGAGGGTaGAGTGTGATGGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: SLGPSSRKGSQQQPLRPWVREGG*SVMGSY
Trigger: GTAAGAGCCCATCACACTCCACCCTCCCTCCCTCAC...CCAGGGCCGGAGGGGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCCTAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCTGGGGTCTGAGCCGTTaGTGCTACGAGTCCGCGGGG +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAWGLSR*CYESAG
Trigger: CCCCGCGGACTCGTAGCAGCAACGGCTCAGACCCCA...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AAAAGTGCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCACCAGGTTGGGCATGCTaGCCGAGCTGGCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KSAEGQSWCRVTVRLGKAPGWAC*PSWLSP
Trigger: TGGGCTCAGCCAGCTCGGGCAGCATGCCCAACCTGG...TGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGCACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCGGAGTCCGCAGGATCTaGGATCGCGACGGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTGVRRI*DRDGVR
Trigger: CCTGACGCCGTCGCGATCGCAGATCCTGCGGACTCC...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCGGAGTCCGCAGGATCTaGGATCGCGACGGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAGVRRI*DRDGVR
Trigger: CCTGACGCCGTCGCGATCGCAGATCCTGCGGACTCC...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCCGGCTGTGCTCCTTGTaGGAGGCGGTGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSARLCSL*EAVERW
Trigger: CCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCG...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTGCTCTGGGAGGAGGTaGTGTACTGCGAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSCSGRR*CTASRC
Trigger: ACAGCGGCTCGCAGTACAGCACCTCCTCCCAGAGCA...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp TGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WARAPGDTQWDRNLPECLLVTLL*ATKVLW
Trigger: CCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAG...GAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGGCGTGGACGGCATGCTaGACTGGGAGTTCCAGTGCG +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEAWTAC*TGSSSA
Trigger: CGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGC...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTCGCGCGCCGCCAGGTTaGGCATGCTGCCCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RLYRGIGAVFQALYGERSRAPPG*ACCPSW
Trigger: CCAGCTCGGGCAGCATGCCCAACCTGGCGGCGCGCG...ACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCGAACGCTGGTACCACTaGCGCAGCTCGTCTGAGACG +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSERWYH*RSSSET
Trigger: CGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTC...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp AAAAGTGCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAGAGGCGGTGGAACGCTaGTACCACTGGCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KSAEGQSWCRVTVRLGKAEAVER*YHWRSS
Trigger: CGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTC...TGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGCACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATCCGAGGAGGTGGAGCTaGTGTGCGACAGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNPRRWS*CATGGC
Trigger: ACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGG...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCAAACTACCCCCACCCTaGCTCCTGTCCCTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSKLPPP*LLSLAV
Trigger: GACAGCCAGGGACAGGAGCCAGGGTGGGGGTAGTTT...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CTTAGGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCCCCTCCGGCCCTGGGGGTTAGTGTCCACCGATaGATGAGGAGATGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LRPLQQERLTTAAPPALGVSVHR*MRRCFR
Trigger: CCGGAAGCATCTCCTCATCCATCGGTGGACACTAAC...CCCCAGGGCCGGAGGGGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCCTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSSGASW*PCCAPR
Trigger: TCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGA...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp TGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCAAAGCTGGTGCAGGGTaGCGGTGCGTCTGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: WARAPGDTQWDRNLPECLKAGAG*RCVWVR
Trigger: CCTTACCCAGACGCACCGTCACCCTGCACCAGCTTT...GAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCCGGATGGGGCTGTTCTaGAAGGAGTTGCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPRMGLF*KELLPP
Trigger: CGGAGGAAGCAACTCCTTGCAGAACAGCCCCATCCG...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGAGGTGGAGCTGGTGTaGGACAGGCGGCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLRIGVWLSMGKSARGHTEVELV*DRRLCS
Trigger: GGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTC...TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGAGGGCCAAAGCTGGTaGAGGGTGACGGTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNEGQSW*RVTVRL
Trigger: CAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTC...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTGCGGGAGGCCGCGGATaGGGCTGTTCTGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: RQPRLPRLYRGIGAVFQAAGGRG*GCSARS
Trigger: ACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGC...AGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGCCTTGTGCGAGGCGGTaGAACGCTGGTACCACTGGC +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQPCARR*NAGTTG
Trigger: GCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGG...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCAGATTAGGCCGGGCTaGCTCACACGAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RQPRLPRLYRGIGAVFQAQIRPG*LTRGSR
Trigger: CCGGGACCCTCGTGTGAGCCAGCCCGGCCTAATCTG...AGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCGCTGAGGGCCAAAGCTaGTGCAGGGTGACGGTGCGT +
Preference number: 4 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTAEGQS*CRVTVR
Trigger: ACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCTGGTTGGCCTACGTATaGGTGGCAGGCTGGACACAG +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSWLAYV*VAGWTQ
Trigger: CTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCA...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGGCTGAACCCCCTGCATaGACCGGGGCTAACAGTACC +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEAEPPA*TGANST
Trigger: GGTACTGTTAGCCCCGGTCCATGCAGGGGGTTCAGC...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTGGCAGCTTGCCCGTaGGCTCAGCTTCTCGGAGAC +
Preference number: 4 (lower is better)
Translates to: RQPRLPRLYRGIGAVFQALAACP*AQLLGD
Trigger: GTCTCCGAGAAGCTGAGCTCACGGGCAAGCTGCCAG...AGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTTCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGA +
Preference number: 4 (lower is better)
Translates to: IEDWCLALYGQERQGTHSSGASW*PCCAPR
Trigger: TCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGA...ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCCCACCAAGGTGCCATTaGGGATTGGTGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPPPRCH*GLVSGS
Trigger: AGAGCCAGACACCAATCCTCAATGGCACCTTGGTGG...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGATGCACGAATCCTGCTaGCGAGTCAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEMHESC*RVSPPG
Trigger: CCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCAT...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCTCCTTGATGCGGTACTaGGAGCTGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTSLMRY*ELGWLW
Trigger: CCAGAGCCAGCCCAGCTCGCAGTACCGCATCAAGGA...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp TCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGGGTCGCTCTCCAGGCTaGGCACCACCACGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSPLSRSLPTLLIRRNWMGRSPG*APPRAW
Trigger: CCACGCCCGTGGTGGTGCGCAGCCTGGAGAGCGACC...CATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp CCGGGGCTAACAGTACCCTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATTGCGACAGGCGGCTGTaGTCCTTGTGCGAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: PGLTVPSTTPTGLSLCPDCDRRL*SLCEAV
Trigger: CACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCA...ATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAGGGTACTGTTAGCCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGTGCGACAGGCGGCTGTaGTCCTTGTGCGAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQECDRRL*SLCEAV
Trigger: CACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCA...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCCAGCTGACGTGGCCTTaGACATCTGGGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAQLTWP*TSGASW
Trigger: CCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp TTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGACAGGCCCGCAGGTCTGGCGTaGACGGCATGCTGGACTGGG +
Preference number: 4 (lower is better)
Translates to: FQNVSSVRFSRGRECGDRPAGLA*TACWTG
Trigger: CCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGG...CCTGTCTCCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCTGTCCACCGACCTCGTaGAATGGACGTAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: WARAPGDTQWDRNLPECLCPPTS*NGRSGD
Trigger: GTCCCCACTACGTCCATTCCACGAGGTCGGTGGACA...GAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCCCAGCGTGGAGTAGTTaGCGTTCATCTGCGCCGGGT +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAPAWSS*RSSAPG
Trigger: ACCCGGCGCAGATGAACGCCAACTACTCCACGCTGG...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACATGCGGTACTGCGAGCTaGGCTGGCTCTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PLRIGVWLSMGKSARGHTCGTAS*AGSGCA
Trigger: TGCACAGCCAGAGCCAGCCCAGCTCGCAGTACCGCA...TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGCACCACCACGGGCGTaGCGCCGCCCTCGATGTACA +
Preference number: 4 (lower is better)
Translates to: MAEGSHQGAIEDWCLALYAPPRA*RRPRCT
Trigger: TGTACATCGAGGGCGGCGCCACGCCCGTGGTGGTGC...ATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp TGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCGAGGCGGTGGAACGCTaGTACCACTGGCGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: CLVGLRMGGRLDTAESSFEAVER*YHWRSS
Trigger: CGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTC...GAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGCCTTGTGCGAGGCGGTaGAACGCTGGTACCACTGGC +
Preference number: 4 (lower is better)
Translates to: LRMGGRLDTAESSFWVTLPCARR*NAGTTG
Trigger: GCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGG...CAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGCCGAGGAGGTGGAGCTaGTGTGCGACAGGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRPRRWS*CATGGC
Trigger: ACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGG...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCTGTCCGAGGAGGTaGAGCTGGTGTGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQERCPRR*SWCATG
Trigger: GCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCG...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCGCTGAGGGCCAAAGCTaGTGCAGGGTGACGGTGCGT +
Preference number: 4 (lower is better)
Translates to: VGLRMGGRLDTAESSFWVAEGQS*CRVTVR
Trigger: ACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC...GACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp GAGCCCCTGCCTCGATCACTAAAACACTTCTGGAACCTTCCGTGGAGACTGAATCAGCAGGCCGAGAGCTaGGTCGGGCACCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: EPLPRSLKHFWNLPWRLNQQAES*VGHQLH
Trigger: GTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTG...ATTCAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGATCGAGGCAGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp AAAAGTGCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCACTGCTGGAATGGCTGTaGGAGGAGCGCTTCTTGACC +
Preference number: 4 (lower is better)
Translates to: KSAEGQSWCRVTVRLGKALLEWL*EERFLT
Trigger: GGTCAAGAAGCGCTCCTCTCACAGCCATTCCAGCAG...TGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGCACTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCAGTCTTGGGCTCGGCTaGACCCCCTGCATGGACCGG +
Preference number: 4 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECSLGLG*TPCMDR
Trigger: CCGGTCCATGCAGGGGGTTCAGCCGAGCCCAAGACT...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TCCTTAGGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCCCCTCCGGCCCTGGACCTTCCGTGGAGACTaGATCTGTAAGATCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLGPSSRKGSQQQPLRPWTFRGD*ICKILV
Trigger: GACAAGGATCTTACAGATTCAGTCTCCACGGAAGGT...CCAGGGCCGGAGGGGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCCTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCCCATGCACGAATCCTaGTGCCGAGTCAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTPMHES*CRVSPP
Trigger: AGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGG...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTGGCGTGGACGGCATaGTGGACTGGGAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RQPRLPRLYRGIGAVFQALAWTA*WTGSSS
Trigger: ACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAG...AGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCGTGCCTAAAGTGCAGTaGGAGGCTGTGCAGTCGGGT +
Preference number: 4 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTVPKVQ*EAVQSG
Trigger: ACCCGACTGCACAGCCTCGCACTGCACTTTAGGCAC...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCGGTCTGAGCCGTTGCTaGTACGAGTCCGCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: CLVGLRMGGRLDTAESSFGLSRC*YESAGC
Trigger: ACACCCCGCGGACTCGTAGCAGCAACGGCTCAGACC...GAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGCTCTGGGAGGAGGTaGTGTACTGCGAGCCGCTGT +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSCSGRR*CTASRC
Trigger: ACAGCGGCTCGCAGTACAGCACCTCCTCCCAGAGCA...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCGTTGCTTCTCCAGTCTaGCAGGTTAGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSVASPV*QVRMWW
Trigger: CCACCACATCCTAACCTGGCAGACTGGAGAAGCAAC...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCCTTGGCCAACAGCTTaGGCTGTACTAGGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSPWPTA*AVLGVP
Trigger: TGGAACTCCTAGTACAGCCCAAGCTGTTGGCCAAGG...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCGGTCAAGAAGCTCCTTaGCCAACAGCTTGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSGQEAP*PTAWAV
Trigger: TACAGCCCAAGCTGTTGGCCAAGGAGCTTCTTGACC...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCGGGGCTAACAGTACCCTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATTGCTCCTTCAGGGCTTaGGTGGGAAGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLTVPSTTPTGLSLCPDCSFRA*VGRAGS
Trigger: GCTGCCAGCCCTTCCCACCCAAGCCCTGAAGGAGCA...ATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAGGGTACTGTTAGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCACTGGACATCAGCTAGTTCTGGATAGAGGGCCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: AWLFPARTTGHQLVLDRGPSQSS*APGGYR
Trigger: TCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGG...CCCTCTATCCAGAACTAGCTGATGTCCAGTGGTACGGGCAGGAAAAAGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCCCTGTTGTGCGACGGTaGCCGAGGAGGGAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: CLVGLRMGGRLDTAESSFPVVRR*PRRESL
Trigger: AAGGGACTCCCTCCTCGGCCACCGTCGCACAACAGG...GAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCCGCTGTCCGAGGAGGTaGAGCTGGTGTGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECRCPRR*SWCATG
Trigger: GCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCG...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCGGTGCCATTGAGGATTaGTGTCTGGCTCTCTATGGG +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSGAIED*CLALYG
Trigger: CCCATAGAGAGCCAGACACCAATCCTCAATGGCACC...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCGTATGGGTGGCAGGCTaGACACAGCTGAATCGTCTT +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSVWVAG*TQLNRL
Trigger: AAGACGATTCAGCTGTGTCCAGCCTGCCACCCATAC...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCTCCGTAATCTGGGACTaGATGGCAAACTCTCGTTCC +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSSVIWD*MANSRS
Trigger: GGAACGAGAGTTTGCCATTCAGTCCCAGATTACGGA...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCGGCTCCAATTTCACTTaGCGGTGTCGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: WARAPGDTQWDRNLPECLGSNFT*RCRASL
Trigger: CAGAGAAGCTCGACACCGTCAAGTGAAATTGGAGCC...GAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAAAGCTGGTGCAGGGTaGCGGTGCGTCTGGGTAAGG +
Preference number: 4 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRKAGAG*RCVWVR
Trigger: CCTTACCCAGACGCACCGTCACCCTGCACCAGCTTT...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCAGGCTGGACACAGCTaGATCGTCTTTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTQAGHS*IVFLGH
Trigger: GTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTG...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGACTGCAATGCCGCTGTaGCCAAACGTCCTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQTAMPL*PNVLLV
Trigger: GACAAGGAGGACGTTTGGGCACAGCGGCATTGCAGT...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCGATCAATGCCGGACATaGATACCACGTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: WARAPGDTQWDRNLPECLDQCRT*IPRVHC
Trigger: GCAGTGCACACGTGGTATGCATGTCCGGCATTGATC...GAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGACCGCACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGPHSFL*WGSACG
Trigger: GCCACAAGCGCTTCCCCAGCACAGGAAGCTGTGCGG...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGATGCAGTGCGAGGCTGTaGAGTCGGGTGGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGCSARL*SRVGLM
Trigger: CATCAGCCCCACCCGACTGCACAGCCTCGCACTGCA...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGGCTGGAGCTCCGGTaGCTAAAGTGCAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRRLELR*LKCSAR
Trigger: CCTCGCACTGCACTTTAGGCACCGGAGCTCCAGCCT...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTAGCTCGAGTGGCTGGTaGACGACGAGCAGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: IEDWCLALYGQERQGTHSSSSGW*TTSSRP
Trigger: TGGACGACTGCTCGTCGTGCACCAGCCACTCGAGCT...ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCGGCTGTGCTCCTTGTaGGAGGCGGTGGAACGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPLSRSLPTLLIRRNWMRLCSL*EAVERW
Trigger: CCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCG...CATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTTGTGCGCCACGAAGGTaGTCTGGGAGGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SWQREATKVPLRIGVWLSCAPRR*SGRRCC
Trigger: ACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACA...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp AGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGCAGCTGACGTGGCCTTaGACATCTGGGGCATCCTGG +
Preference number: 4 (lower is better)
Translates to: SGTGTFQNVSSVRFSRGRQLTWP*TSGASW
Trigger: CCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG...CCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAAGAGGGCCAAAGCTGGTaGAGGGTGACGGTGCGTCTG +
Preference number: 4 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAEEGQSW*RVTVRL
Trigger: CAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTC...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GGAACTGAGTCCTTAGGCCCCTCCAGCAGGAAAGGCTCACAACAGCAGCCCCTCCGATGGATGAGGAGATaGTTCCGGCAGATTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GTESLGPSSRKGSQQQPLRWMRR*FRQIAL
Trigger: GAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCG...GAGGGGCTGCTGTTGTGAGCCTTTCCTGCTGGAGGGGCCTAAGGACTCAGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp TGGCCACACGTTCCCATGATCCGTGGGGCCAGATCATGCTATTCCCAGTTCACACCTTCAGGGCTTGGGTaGGAAGGGCTGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WPHVPMIRGARSCYSQFTPSGLG*EGLAAS
Trigger: AGAAGCTGCCAGCCCTTCCCACCCAAGCCCTGAAGG...TGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR CCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCAGGCTGCGTGCTGCATaGATTTTGGACTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSRLRAA*ILDLLC
Trigger: GCAGAGTAAGTCCAAAATCCATGCAGCACGCAGCCT...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCCCAGCATGTCCTTCTTaGCCGACTGCGAGCTATCTG +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAPACPS*PTASYL
Trigger: CAGATAGCTCGCAGTCGGCCAAGAAGGACATGCTGG...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACACCAGAGCTTCCTGCCTaGACTTCAAGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PLRIGVWLSMGKSARGHTPELPA*TSRQPA
Trigger: TGCTGGCTGCCTTGAAGTCCAGGCAGGAAGCTCTGG...TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTCCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELPSQSS*APGGYR
Trigger: TCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGG...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp GGAGGGAGGGTGGAGTGTGATGGGCTCTTACTGTCTCCATTCGGTTTTGTCTTACCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGA +
Preference number: 4 (lower is better)
Translates to: GGRVECDGLLLSPFGFVLPSQSS*APGGYR
Trigger: TCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGG...TAAGACAAAACCGAATGGAGACAGTAAGAGCCCATCACACTCCACCCTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp GTAACTCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTCCGGACCCGCAGGTCTaGCGTGGACGGCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: VTQVPFPVLSQRYLSAGIPDPQV*RGRHAG
Trigger: TCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGG...AATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGAGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGACGAGCAGTCGTCCATaGGGTCTGAGCCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQETSSRP*GLSRCC
Trigger: GCAGCAACGGCTCAGACCCCATGGACGACTGCTCGT...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTGAGCTGGGCTGGCTCTaGCTGTGCAGGTACACACCG +
Preference number: 4 (lower is better)
Translates to: GWTQLNRLSGSPCNSSPLELGWL*LCRYTP
Trigger: CGGTGTGTACCTGCACAGCCAGAGCCAGCCCAGCTC...AAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGGCCACGAAGGTGCTCTaGGAGGAGGTGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRATKVL*EEVLYC
Trigger: GCAGTACAGCACCTCCTCCCAGAGCACCTTCGTGGC...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGCATGAAGTGCTTGGTTaGCCTACGTATGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEHEVLG*PTYGWQ
Trigger: CTGCCACCCATACGTAGGCCAACCAAGCACTTCATG...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATAGCCATGCATGGAGCTaGGGAAAGCAGGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNSHAWS*GKQALN
Trigger: ATTCAGGGCCTGCTTTCCCCAGCTCCATGCATGGCT...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGTTTGGGCTTGATGGGTaGCTTGTCATAGTCGTTGCG +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEFGLDG*LVIVVA
Trigger: CGCAACGACTATGACAAGTCACCCATCAAGCCCAAA...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTGTCGTCCATGGGGTCTaGGCCGTTGCTGCTACGAGT +
Preference number: 4 (lower is better)
Translates to: RLYRGIGAVFQALYGERSVVHGV*AVAATS
Trigger: ACTCGTAGCAGCAACGGCTCAGACCCCATGGACGAC...ACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTACAGCGGGTACTCCTTaGTGCGGTACTGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GWTQLNRLSGSPCNSSPLTAGTP*CGTASW
Trigger: CCAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGT...AAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATCTGGCGCAGCTCGTCTaGGACGGCGGCACGGCCCGC +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNLAQLV*DGGTAR
Trigger: GCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAG...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp CCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGAGGCCTCCTCTTCATaGAGTGCTTGGTTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: PLRIGVWLSMGKSARGHTEASSS*SAWLAY
Trigger: GTAGGCCAACCAAGCACTTCATGAAGAGGAGGCCTC...TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp ATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTGATGGATGGCGACTGTaGGTCAGCAACGCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: IEDWCLALYGQERQGTHSDGWRL*VSNASQ
Trigger: TTGGCTGGCGTTGCTGACTCACAGTCGCCATCCATC...ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCAGGAGAAGTCGGATCTaGGCTCTTTTGTCACACAAG +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPRRSRI*ALLSHK
Trigger: CTTGTGTGACAAAAGAGCTCAGATCCGACTTCTCCT...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCAGAGGAACATGGAATTaGACTGCCTGTTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPRGTWN*TACSVS
Trigger: GCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCT...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AAGAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTTGGCCACTACACTCTGGGCACCAGCTGCACTaGCATGGTCTCCGATTCCCA +
Preference number: 4 (lower is better)
Translates to: KRSPIVTPQRTCSWPLHSGHQLH*HGLRFP
Trigger: TGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCC...AGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCTCCTTGATGCGGTACTaGGAGCTGGGCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECSLMRY*ELGWLW
Trigger: CCAGAGCCAGCCCAGCTCGCAGTACCGCATCAAGGA...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGGGTGGTTCCTCCCCTaGATCCAGGGGATATTCTAC +
Preference number: 4 (lower is better)
Translates to: PLRIGVWLSMGKSARGHTGWFLP*IQGIFY
Trigger: GTAGAATATCCCCTGGATCCAGGGGAGGAACCACCC...TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp AGGGAGGGAGGGTGGAGTGTGATGGGCTCTTACTGTCTCCATTCGGTTTTGTCTCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: REGGWSVMGSYCLHSVLSLLGPG*LQSIQK
Trigger: CTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAG...AGACAAAACCGAATGGAGACAGTAAGAGCCCATCACACTCCACCCTCCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp CCGGGGCTAACAGTACCCTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATCCAGCTGCACTGCCATaGTCTCCGATTCCCATGCAC +
Preference number: 4 (lower is better)
Translates to: PGLTVPSTTPTGLSLCPDPAALP*SPIPMH
Trigger: GTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGG...ATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAGGGTACTGTTAGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCACTGGACATCAGCTAGTTCTGGATAGAGGGTACTGCGAGCTGGGCTaGCTCTGGCTGTGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: AWLFPARTTGHQLVLDRGYCELG*LWLCRY
Trigger: GTACCTGCACAGCCAGAGCCAGCCCAGCTCGCAGTA...CCCTCTATCCAGAACTAGCTGATGTCCAGTGGTACGGGCAGGAAAAAGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGAACGCTGGTACCACTaGCGCAGCTCGTCTGAGACG +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGERWYH*RSSSET
Trigger: CGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTC...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp AAAAGTGCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCATCCTGCCCGTACCACTaGACATCAGCTAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KSAEGQSWCRVTVRLGKASCPYH*TSASSG
Trigger: TCCAGAACTAGCTGATGTCCAGTGGTACGGGCAGGA...TGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGCACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCTCCTGCCCGTACCACTaGACATCAGCTAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSASCPYH*TSASSG
Trigger: TCCAGAACTAGCTGATGTCCAGTGGTACGGGCAGGA...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp AGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGCCAGGGGACACACAGTaGGACCGGAACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SGTGTFQNVSSVRFSRGRPGDTQ*DRNLPE
Trigger: TTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGG...CCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATCATGAAGTGCTTGGTTaGCCTACGTATGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNHEVLG*PTYGWQ
Trigger: CTGCCACCCATACGTAGGCCAACCAAGCACTTCATG...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGTTGTCTAGAGAGACTTaGTGGAGGAGGCCACGGCCC +
Preference number: 4 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRLSRET*WRRPRP
Trigger: GGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAA...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTCAGTCCAGCCATGCATaGAGCTGGGGAAAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GWTQLNRLSGSPCNSSPLQSSHA*SWGKQA
Trigger: GGCCTGCTTTCCCCAGCTCCATGCATGGCTGGACTG...AAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGGGGCCATGAATTACTGTGGAGGCCAAGCCTGCACTTCCTTCTCCCTGGCAATGCACTTCCTTCTCCCTaGCAATCCATGTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: GGHELLWRPSLHFLLPGNALPSP*QSMWPH
Trigger: GTGTGGCCACATGGATTGCCAGGGAGAAGGAAGTGC...ATTGCCAGGGAGAAGGAAGTGCAGGCTTGGCCTCCACAGTAATTCATGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR CCA 90 bp GGCCAAGCCTGCACTTCCTTCTCCCTGGCAATCCATGTGGCCACACGTTCCCATGGCCATGAATTACTGTaGAGGCCAAGCCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: GQACTSFSLAIHVATRSHGHELL*RPSLHF
Trigger: GAAGTGCAGGCTTGGCCTCCACAGTAATTCATGGCC...ATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAGGAAGTGCAGGCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR TCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCCTTCAGATTGAAGTaGGAAGCCACAAGGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSSFRLK*EATRSR
Trigger: TCTTGACCTTGTGGCTTCTCACTTCAATCTGAAGGA...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCCCTTTTCCTTCAGATTaGAGTGAGAAGCCACAAGGT +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSPFPSD*SEKPQG
Trigger: ACCTTGTGGCTTCTCACTTCAATCTGAAGGAAAAGG...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTAGTTCCTCCAGCCTCTaGCGCAGGGTTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLYRGIGAVFQALYGERSSSSSL*RRVSSR
Trigger: TCTGGAGGAAACCCTGCGTCAGAGGCTGGAGGAACT...ACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATCTCAGAATGGCGTTaGGGCGGTCAGATTAGGCCG +
Preference number: 4 (lower is better)
Translates to: SWQREATKVPLRIGVWLSISEWR*GGQIRP
Trigger: CGGCCTAATCTGACCGCCTCAACGCCATTCTGAGAT...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTCAGGCTGGACACAGCTaGATCGTCTTTCTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SWQREATKVPLRIGVWLSQAGHS*IVFLGH
Trigger: GTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTG...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCGGTTCTTGGAATAAGTaGCACATAGGAGAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSGSWNK*HIGEVG
Trigger: TCCGACTTCTCCTATGTGTCACTTATTCCAAGAACC...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CTGGCAATCCATGTGGCCACACGTTCCCATGATCCGTGGGGCCAGATCATGCTACTCATTAGGGGGCCATaGATTACTGTGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LAIHVATRSHDPWGQIMLLIRGP*ITVEAK
Trigger: CTTGGCCTCCACAGTAATTCATGGCCCCCTAATGAG...TAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR GCA 90 bp AAAAGTGCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCACTCACTCAGGCTGCGTaGTGCATGGATTTTGGACTT +
Preference number: 4 (lower is better)
Translates to: KSAEGQSWCRVTVRLGKALTQAA*CMDFGL
Trigger: AAGTCCAAAATCCATGCAGCACGCAGCCTGAGTGAG...TGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGCACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACACTGGAGATCAGCAAATaGCCTTACCATCCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PLRIGVWLSMGKSARGHTLEISK*PYHPRG
Trigger: TCCTCGGGGATGGTAAGGGCATTTGCTGATCTCCAG...TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AAGAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTTGGCCACTACACTCTGGTCTCCGATTCCCATaGACGAATCCTGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: KRSPIVTPQRTCSWPLHSGLRFP*TNPAAE
Trigger: CTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACC...AGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp CCAGCTCTGGTCACTGAGTTGGTGAGGGATGGATTCAGAAGAGGTCTCCAATTGGAGTCGGGCACCAGCTaGACTGCCATGGTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: PALVTELVRDGFRRGLQLESGTS*TAMVSD
Trigger: ATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTC...CAATTGGAGACCTCTTCTGAATCCATCCCTCACCAACTCAGTGACCAGAGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp CGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTTGTTCTGCAAGGAGTTaGTTCCTCCGCCGGCTTCCG +
Preference number: 4 (lower is better)
Translates to: RLYRGIGAVFQALYGERSCSARS*FLRRLP
Trigger: CGGAAGCCGGCGGAGGAAGCAACTCCTTGCAGAACA...ACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCGGCTTGGCTTTTTCCTaGCCGTACCACTGGACATCA +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSGLAFS*PYHWTS
Trigger: TGATGTCCAGTGGTACGGGCAGGAAAAAGCCAAGCC...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPLLGPG*LQSIQK
Trigger: CTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAG...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAAGCGCTTGTGGCTGCTaGAATGGCTGTGAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGSACGC*NGCERS
Trigger: GCTCCTCTCACAGCCATTCCAGCAGCCACAAGCGCT...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTAGTCCTCGGCCAGCGTaGAGTAGTTGGCGTTCATCT +
Preference number: 4 (lower is better)
Translates to: IEDWCLALYGQERQGTHSSPRPA*SSWRSS
Trigger: AGATGAACGCCAACTACTCCACGCTGGCCGAGGACT...ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTGCATGCTGCCCGAGCTaGCTGAGCCCAGTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: SELFCHTSANEQKMSHDSACCPS*LSPVRP
Trigger: CGGGCGCACTGGGCTCAGCCAGCTCGGGCAGCATGC...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGGTGTCTGGCTCTCTATaGGCAAGAGCGCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: SSPLSRSLPTLLIRRNWMVSGSL*ARAPGD
Trigger: GTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACAC...CATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCGTGTCTGGCTCTCTATaGGCAAGAGCGCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPVSGSL*ARAPGD
Trigger: GTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACAC...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTTGAGGATTGGTGTCTaGCTCTCTATGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQLRIGV*LSMGKS
Trigger: GCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAA...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGTAACTCAAGTCCCCTTTGGTTGGCCTACGTATaGGTGGCAGGCTGGACACAG +
Preference number: 4 (lower is better)
Translates to: GWTQLNRLSGSPCNSSPLWLAYV*VAGWTQ
Trigger: CTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCA...AAGGGGACTTGAGTTACAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTCCTGGCTCCTGTCCCTaGCTGTCAATGCCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SWQREATKVPLRIGVWLSPGSCP*LSMPFQ
Trigger: TTGGAAAGGCATTGACAGCCAGGGACAGGAGCCAGG...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GTAACTCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTTCTAGAGAGACTTGGTaGAGGAGGCCACGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VTQVPFPVLSQRYLSAGISRETW*RRPRPA
Trigger: GGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGA...AATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTTGGCCACTACACTCTACCAGAGGACCTGCTCTTaGCCACTACACTCTACCAGC +
Preference number: 4 (lower is better)
Translates to: EVSNCDTAEDLLLATTLYQRTCS*PLHSTS
Trigger: GCTGGTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTG...GTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
3UTR CAA 72 bp CTGAATATGCCACGAGGCCTCCTCTTCATGAAGTGCTaGGTTGGCCTACGTATGGGTGGCAGGCTGGACACA +
Preference number: 4 (lower is better)
Translates to: LNMPRGLLFMKC*VGLRMGGRLDT
Trigger: TGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGGAGGCCTCGTGGCATATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
3UTR CAA 72 bp GAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTaGGCCACTACACTCTACCAGCTCTGCAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: EVSNCDTAEDLL*ATTLYQLCKKV
Trigger: CACCTTCTTGCAGAGCTGGTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp ATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATTCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: MAEGSHQGAIEDWCLALYSRRCT*HRRPSV
Trigger: GACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGA...ATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTTGTTTCCATCGTCTATaGTCAGCGAAGCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SWQREATKVPLRIGVWLSCFHRL*SAKPSG
Trigger: CCCAGAGGGCTTCGCTGATCATAGACGATGGAAACA...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATCGCGCCAGCTCTCCTTaGACAGGCCGCCCGCCGTGT +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNRASSP*TGRPPC
Trigger: ACACGGCGGGCGGCCTGTTCAAGGAGAGCTGGCGCG...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAAGAGCTTCTCTGGCTTTaGGGTAAGGCAGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAEELLWL*GKAADV
Trigger: CACGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTC...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGAGCTTCTCTGGCTTTaGGGTAAGGCAGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGELLWL*GKAADV
Trigger: CACGTCAGCTGCCTTACCTCAAAGCCAGAGAAGCTC...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp CCGGGGCTAACAGTACCCTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATGGCTCCAATTTCACTTaGCGGTGTCGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PGLTVPSTTPTGLSLCPDGSNFT*RCRASL
Trigger: CAGAGAAGCTCGACACCGTCAAGTGAAATTGGAGCC...ATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAGGGTACTGTTAGCCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTAGCGTTCTGGGAATATaGATCCCTTCTGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SWQREATKVPLRIGVWLSSVLGI*IPSAPW
Trigger: CCAGGGTGCAGAAGGGATTCATATTCCCAGAACGCT...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCCATTTCCCACCACACTaGTCATTAATCATGTCAGTC +
Preference number: 4 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSHFPPH*SLIMSV
Trigger: GACTGACATGATTAATGATCAGTGTGGTGGGAAATG...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp AGAGCCCCTGCCTCGATCACTAAAACACTTCTGGAACCTTCCGTGGAGACTGAAGTGTCCACCGATGGATaGGGAGATGCTTCCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RAPASITKTLLEPSVETEVSTDG*GDASGR
Trigger: TCTGCCGGAAGCATCTCCTCATCCATCGGTGGACAC...TTCAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGATCGAGGCAGGGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp ATAGCTGTGGTTAGTGTCCACCGATGGATGAGGAGATGCTTCCGGCAGATTGCTCCCATGCACGAATCCTaGTGCCGAGTCAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IAVVSVHRWMRRCFRQIAPMHES*CRVSPP
Trigger: AGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGG...AGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGACACTAACCACAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp TCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGGGTCTCCGATTCCCATaGACGAATCCTGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: SSPLSRSLPTLLIRRNWMGLRFP*TNPAAE
Trigger: CTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACC...CATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CCTGGCTCTAAAGATAAACTAATCCTCGGCTCTAGCATGTTCCAGCCCTTGCAGGGGCACCAGCTGCACTaGCATGGTCTCCGATTCCCA +
Preference number: 4 (lower is better)
Translates to: PGSKDKLILGSSMFQPLQGHQLH*HGLRFP
Trigger: TGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCC...CTGCAAGGGCTGGAACATGCTAGAGCCGAGGATTAGTTTATCTTTAGAGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp CCTGGCTCTAAAGATAAACTAATCCTCGGCTCTAGCATGTTCCAGCCCTTGCAGGAGTCGGGCACCAGCTaGACTGCCATGGTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: PGSKDKLILGSSMFQPLQESGTS*TAMVSD
Trigger: ATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTC...CTGCAAGGGCTGGAACATGCTAGAGCCGAGGATTAGTTTATCTTTAGAGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCGCGGTTCTCATTGATTaGATTTTCAATCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPELSRETWWRRPRPALSAVLID*IFNLLQ
Trigger: CTGCAGGAGATTGAAAATGCAATCAATGAGAACCGC...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTGGAGGAGGCCTGTTGTaGGACGGTGGCCGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SELFCHTSANEQKMSHDSGGGLL*DGGRGG
Trigger: CCCTCCTCGGCCACCGTCGCACAACAGGCCTCCTCC...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGCTCCTCTTCATGAAGTaGTTGGTTGGCCTACGTATG +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQLLFMK*LVGLRM
Trigger: CATACGTAGGCCAACCAAGCACTTCATGAAGAGGAG...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp AAAAGTGCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCACTCCTCTTCATGAAGTaGTTGGTTGGCCTACGTATG +
Preference number: 4 (lower is better)
Translates to: KSAEGQSWCRVTVRLGKALLFMK*LVGLRM
Trigger: CATACGTAGGCCAACCAAGCACTTCATGAAGAGGAG...TGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCATTGTGGTCCTCCGATaGATTTCTGGTGTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAIVVLR*ISGVEN
Trigger: GTTCTCGACACCAGAAATGCATCGGAGGACCACAAT...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCAAATGAGGAATGGATCGCAATGTaGTTTTCCCTTGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: AEGQSWCRVTVRLGKANEEWIAM*FSLGFP
Trigger: TGGGAAACCAAGGGAAAAGCACATTGCGATCCATTC...CTCATTTGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGACAGGTCACCAGTCCAGCCATaGATGGAGCTGGGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: FQNVSSVRFSRGRECGDRSPVQP*MELGKA
Trigger: TGCTTTCCCCAGCTCCATGCATGGCTGGACTGGTGA...CCTGTCTCCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGACAGGGTGAACCCCGTAGGTTaGGAGAGACTCCACGATGCT +
Preference number: 4 (lower is better)
Translates to: FQNVSSVRFSRGRECGDRVNPVG*ERLHDA
Trigger: AGCATCGTGGAGTCTCTCCCAACCTACGGGGTTCAC...CCTGTCTCCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGCCTTGCTACCCATGTTaGCCAGCTTCGAGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRPCYPC*PASRSS
Trigger: TGAAGACCTCGAAGCTGGCCAACATGGGTAGCAAGG...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGACAGGTCTCCGAACAATGGGTaGTTCCTCCCCTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: FQNVSSVRFSRGRECGDRSPNNG*FLPWIQ
Trigger: CTGGATCCAGGGGAGGAACCACCCATTGTTCGGAGA...CCTGTCTCCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTCCAGCTGCACTGCCATaGTCTCCGATTCCCATGCAC +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELPAALP*SPIPMH
Trigger: GTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGG...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp ATAGCTGTGGTTAGTGTCCACCGATGGATGAGGAGATGCTTCCGGCAGATTGCTCCAGCTGCACTGCCATaGTCTCCGATTCCCATGCAC +
Preference number: 4 (lower is better)
Translates to: IAVVSVHRWMRRCFRQIAPAALP*SPIPMH
Trigger: GTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGG...AGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGACACTAACCACAGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp GCTTGGCTTTTTCCTGCCCGTACCACTGGACATCAGCTAGTTCTGGATAGAGGGATCAGCGAAGCCCTCTaGGTGGGTTTCTTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: AWLFPARTTGHQLVLDRGISEAL*VGFFPD
Trigger: GTCTGGGAAGAAACCCACCCAGAGGGCTTCGCTGAT...CCCTCTATCCAGAACTAGCTGATGTCCAGTGGTACGGGCAGGAAAAAGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GTAACTCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTCACAGCTTCCTGTGCTaGGGAAGCGCTTGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VTQVPFPVLSQRYLSAGIHSFLC*GSACGC
Trigger: GCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTG...AATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGAGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCGTAAGGCAGCTGACGTaGCCTTGCACATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPVRQLT*PCTSGA
Trigger: TGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTAC...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCCCATCCTTACCCTTCTaGTCTGGTAGAGCCTATGGT +
Preference number: 4 (lower is better)
Translates to: VGLRMGGRLDTAESSFWVPSLPF*SGRAYG
Trigger: ACCATAGGCTCTACCAGACCAGAAGGGTAAGGATGG...GACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCGGGGCTAACAGTACCCTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATATCCCTTCTGCACCCTaGAATCACCAGTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PGLTVPSTTPTGLSLCPDIPSAP*NHQSSH
Trigger: ATGGCTGGACTGGTGATTCCAGGGTGCAGAAGGGAT...ATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAGGGTACTGTTAGCCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTGAGACCCCACAATCATaGCAGCAGGCAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELETPQS*QQAKGE
Trigger: CTCCCCCTTTGCCTGCTGCCATGATTGTGGGGTCTC...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp CGTTCCCATGATCCGTGGGGCCAGATCATGCTATTCCCAGTTCACATTCCATCCCCCTGGCAATCCATGTaGCCACACGTTCCCATGATC +
Preference number: 4 (lower is better)
Translates to: RSHDPWGQIMLFPVHIPSPWQSM*PHVPMI
Trigger: GATCATGGGAACGTGTGGCCACATGGATTGCCAGGG...GGATGGAATGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR CAA 72 bp AACGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATaGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: NASQDFLAFTVA*GQFFRLSTERE
Trigger: TTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAAAAGTCACTTAGGAACTaGCCCTTCCACCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAEKSLRN*PFHLPQ
Trigger: CTGGGGAAGGTGGAAGGGTCAGTTCCTAAGTGACTT...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GAGAGAAGTGGGCCAGTAAGGGAGAGGGCTAGAGAGAGGACACCAGTTTACATAGAGGCCTCCTCTTCATaGAGTGCTTGGTTGGCCTAC +
Preference number: 4 (lower is better)
Translates to: ERSGPVRERARERTPVYIEASSS*SAWLAY
Trigger: GTAGGCCAACCAAGCACTTCATGAAGAGGAGGCCTC...TATGTAAACTGGTGTCCTCTCTCTAGCCCTCTCCCTTACTGGCCCACTTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGAAAGGAAAGCAGCTTTaGGTCTTGGGCTCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQEKGKQL*VLGSAE
Trigger: TTCAGCCGAGCCCAAGACTCAAAGCTGCTTTCCTTT...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GACAGGATTCCTCACCTGGAAACACAGAAAATGCTGACTGGTTCAGAGGGGAGCCCTTGCAGCTTTCCCTaGACTCACACGCCCTCAACA +
Preference number: 4 (lower is better)
Translates to: DRIPHLETQKMLTGSEGSPCSFP*THTPST
Trigger: TGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGCAAGG...GCTCCCCTCTGAACCAGTCAGCATTTTCTGTGTTTCCAGGTGAGGAATCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp TCTTCCCAGACAGCTGCGCTTACAAACAAACTGCTAGGTAGCAGTAGCACTTTGGGCCACACGTTCCCATaGTCCGTGGGGCCAGATCAT +
Preference number: 4 (lower is better)
Translates to: SSQTAALTNKLLGSSSTLGHTFP*SVGPDH
Trigger: ATGATCTGGCCCCACGGATCATGGGAACGTGTGGCC...CAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAGCGCAGCTGTCTGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR GCA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATCTGCTTGTCCTTCACTaGATAATAGTGAACCCCGTA +
Preference number: 4 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNLLVLH*IIVNPV
Trigger: TACGGGGTTCACTATTATGCAGTGAAGGACAAGCAG...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGCTTGGCTTTTTCCTaGCCGTACCACTGGACATCA +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGGLAFS*PYHWTS
Trigger: TGATGTCCAGTGGTACGGGCAGGAAAAAGCCAAGCC...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp GAATTACTGTGGAGGCCAAGCCTGCACTTCCTTCTCCCTGGCAATCCATGTGGCCGTGGGGCCAGATCATaGTATTCCCAGTTCACATTC +
Preference number: 4 (lower is better)
Translates to: ELLWRPSLHFLLPGNPCGRGARS*YSQFTF
Trigger: GAATGTGAACTGGGAATAGCATGATCTGGCCCCACG...GCCACATGGATTGCCAGGGAGAAGGAAGTGCAGGCTTGGCCTCCACAGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR GCA 90 bp GGGGGCCATGAATTACTGTGGAGGCCAAGCCTGCACTTCCTTCTCCCTGGCAATCTCTTCCCAGACAGCTaGGCTTACAAACAAACTGCT +
Preference number: 4 (lower is better)
Translates to: GGHELLWRPSLHFLLPGNLFPDS*AYKQTA
Trigger: AGCAGTTTGTTTGTAAGCGCAGCTGTCTGGGAAGAG...ATTGCCAGGGAGAAGGAAGTGCAGGCTTGGCCTCCACAGTAATTCATGGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR CCA 90 bp TGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTTCTTCTCCGAACAATaGGTGGTTCCTCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: CLVGLRMGGRLDTAESSFFFSEQ*VVPPLD
Trigger: ATCCAGGGGAGGAACCACCCATTGTTCGGAGAAGAA...GAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGTGCCATTGAGGATTaGTGTCTGGCTCTCTATGGG +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGGAIED*CLALYG
Trigger: CCCATAGAGAGCCAGACACCAATCCTCAATGGCACC...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGTATGGGTGGCAGGCTaGACACAGCTGAATCGTCTT +
Preference number: 4 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECVWVAG*TQLNRL
Trigger: AAGACGATTCAGCTGTGTCCAGCCTGCCACCCATAC...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGAGCTATCTGATTCCTaGGAACCTGAAGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECELSDS*EPEDSR
Trigger: CCTGCTGTCTTCAGGTTCTCAGGAATCAGATAGCTC...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCTCTGTTCATCCAGTTTaGAGGCTGTTCCTATTCTTC +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSASVHPV*RLFLFF
Trigger: GAAGAATAGGAACAGCCTTCAAACTGGATGAACAGA...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp AATCTAGCTGTCCTGAAGGTGAGCCTTTATAATCTAAGAACCGAAATGGCATCACAGCAGGCCGAGAGCTaGGTCGGGCACCAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NLAVLKVSLYNLRTEMASQQAES*VGHQLH
Trigger: GTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTG...TGATGCCATTTCGGTTCTTAGATTATAAAGGCTCACCTTCAGGACAGCTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp CTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGATTGTGCTGGTAACCTaGGAGTCTTCATCCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LRMGGRLDTAESSFWVTLIVLVT*ESSSSR
Trigger: TCTTGAGGATGAAGACTCTCAGGTTACCAGCACAAT...CAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGCAGTCTGACTATCCATaGATCTTCTTTGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQQSDYP*IFFGRK
Trigger: CTTTCTCCCAAAGAAGATTCATGGATAGTCAGACTG...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTCACGCCCTCAACAAATaGCACGTAGCCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELHALNK*HVAKSF
Trigger: GAAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTG...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp AGAGCCCCTGCCTCGATCACTAAAACACTTCTGGAACCTTCCGTGGAGACTGAAACCAGCTCTGGTCACTaGGTTGGTGAGGGATGGATT +
Preference number: 4 (lower is better)
Translates to: RAPASITKTLLEPSVETETSSGH*VGEGWI
Trigger: AATCCATCCCTCACCAACTCAGTGACCAGAGCTGGT...TTCAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGATCGAGGCAGGGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp CGTTCCCATGATCCGTGGGGCCAGATCATGCTATTCCCAGTTCACATTCCATCCGTAGCAGTAGCACTTTaGCAAATGGAGCACAACCCG +
Preference number: 4 (lower is better)
Translates to: RSHDPWGQIMLFPVHIPSVAVAL*QMEHNP
Trigger: CGGGTTGTGCTCCATTTGTCAAAGTGCTACTGCTAC...GGATGGAATGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR GCA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCATACCACGTGTGCACTaGAATGCCGCTGTGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPIPRVH*NAAVPK
Trigger: TTTGGGCACAGCGGCATTGCAGTGCACACGTGGTAT...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCCGATCTCACTCAGGCTaGGTGCTGCATGGATTTTGG +
Preference number: 4 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPRSHSG*VLHGFW
Trigger: CCAAAATCCATGCAGCACGCAGCCTGAGTGAGATCG...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTGGAACTGTAATTCCTaGTCTCCATTTCTCTCTGTC +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQWNCNS*SPFLSV
Trigger: GACAGAGAGAAATGGAGAGCAGGAATTACAGTTCCA...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GTCCACCGATGGATGAGGAGATGCTTCCGGCAGATTGCTCTCTTAGCCACAATTACACTCTACCAGCTCTaGAAGAAGGTGAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: VHRWMRRCFRQIALLATITLYQL*KKVREG
Trigger: TCCCTCCCTCACCTTCTTGCAGAGCTGGTAGAGTGT...AATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp CCGAAATGGCATCATAACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PKWHHNTLEAPWLFILILLLGPG*LQSIQK
Trigger: CTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAG...CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp CGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTCTCTTTGTGTCCAGATaGATGGCGACTGTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RLYRGIGAVFQALYGERSLFVSR*MATVSQ
Trigger: CTGACTCACAGTCGCCATCCATCTGGACACAAAGAG...ACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TCCTTCTCCCTGGCAATCCATGTGGCCACACGTTCCCATGATCCGTGGGGCCAGCAACTTCATTGCTTTTaGATAAGGTGTCTGACCTCT +
Preference number: 4 (lower is better)
Translates to: SFSLAIHVATRSHDPWGQQLHCF*IRCLTS
Trigger: AGAGGTCAGACACCTTATCCAAAAGCAATGAAGTTG...CTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR TCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCGTCCCGTTTCATCTGTaGATGCTATTCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSVPFHL*MLFQST
Trigger: AGTACTTTGGAATAGCATTCACAGATGAAACGGGAC...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCGAGAGGAGCGCTTCTTaGCCTTCTCATAGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPERSAS*PSHRVH
Trigger: ATGAACCCTATGAGAAGGTCAAGAAGCGCTCCTCTC...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCATTTCAGGTGTAAACTaGATATGCCACGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECISGVN*ICHEAS
Trigger: GGAGGCCTCGTGGCATATTCAGTTTACACCTGAAAT...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCACGACAGTTAAACACTaGATGGATCGCAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSTTVKH*MDRNVL
Trigger: AAGCACATTGCGATCCATTCAGTGTTTAACTGTCGT...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGAGTGGGCTAGAATCTTaGTCCAGTTTTCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQESGLES*SSFLQT
Trigger: AGTCTGGAGAAAACTGGATCAAGATTCTAGCCCACT...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp AGGGAGGGAGGGTGGAGTGTGATGGGCTCTTACTGTCTCCATTCGGTTTTGTCTCAGAAAATCTTGGAATaGGCATCATCCTGCAACCCC +
Preference number: 4 (lower is better)
Translates to: REGGWSVMGSYCLHSVLSQKILE*ASSCNP
Trigger: GGGGTTGCAGGATGATGCTCATTCCAAGATTTTCTG...AGACAAAACCGAATGGAGACAGTAAGAGCCCATCACACTCCACCCTCCCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp GGAGGGAGGGTGGAGTGTGATGGGCTCTTACTGTCTCCATTCGGTTTTGTCTTATTAGATAAAGGGAACTaGGTCCTTAGGCCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GGRVECDGLLLSPFGFVLLDKGN*VLRPLQ
Trigger: CTGGAGGGGCCTAAGGACTCAGTTCCCTTTATCTAA...TAAGACAAAACCGAATGGAGACAGTAAGAGCCCATCACACTCCACCCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp ATTGCTCTCTTAGCCACAATTCCCTCATTTATGGCAGCAAAGCAGGCCAACGATAGGGAGGGTGGAGTGTaGTGGGCTCTTACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: IALLATIPSFMAAKQANDREGGV*WALTVS
Trigger: GGAGACAGTAAGAGCCCATCACACTCCACCCTCCCT...ATCGTTGGCCTGCTTTGCTGCCATAAATGAGGGAATTGTGGCTAAGAGAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp GAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTTGGCCACTACACTCTACGTGCAAGGTAAGATTTaGAGTTGGGTCTGTCTGACT +
Preference number: 4 (lower is better)
Translates to: EVSNCDTAEDLLLATTLYVQGKI*SWVCLT
Trigger: AGTCAGACAGACCCAACTTCAAATCTTACCTTGCAC...GTAGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCCATGTAGTTTACGATTaGTTGACCTCTTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSHVVYD*LTSCLT
Trigger: GGTCAGACAAGAGGTCAAGCAATCGTAAACTACATG...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTGGAGAGACTCCACGATaGTCATGTAGTTTACGATTG +
Preference number: 4 (lower is better)
Translates to: SWQREATKVPLRIGVWLSGETPR*SCSLRL
Trigger: CAATCGTAAACTACATGAGCATCGTGGAGTCTCTCC...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAAACTCAGGCTGCGTGCTaGATGGATTTTGGACTTACT +
Preference number: 4 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAETQAAC*MDFGLT
Trigger: AGTAAGTCCAAAATCCATGCAGCACGCAGCCTGAGT...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGAACATGGAATTGCACTaGCTGTTCTGTGAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQENMELH*LFCERS
Trigger: AGAACGCTCACAGAACAGGCAGTGCAATTCCATGTT...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CCGAAATGGCATCATAACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGATGCACGAATCCTGCTaGCGAGTCAGTCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PKWHHNTLEAPWLFILILMHESC*RVSPPG
Trigger: CCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCAT...CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp AGGGGAGCTAACTTCAGGAGCGAATCCAAAGTGTTAGAAGGTCCTAGAAGTCAACCCATGCACGAATCCTaGTGCCGAGTCAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGANFRSESKVLEGPRSQPMHES*CRVSPP
Trigger: AGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGG...TTGACTTCTAGGACCTTCTAACACTTTGGATTCGCTCCTGAAGTTAGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp ATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATACAGCATACCACCTCTaGGGAAACCTTTTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: MAEGSHQGAIEDWCLALYTAYHL*GNLFVP
Trigger: TGGCACAAAAAGGTTTCCGCAGAGGTGGTATGCTGT...ATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCGGCCCGCCTTGTCCCTaGCGGGTCCCGGCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TKISPSESLESFNNVTGIGPPCP*RVPARC
Trigger: ACACCTGGCCGGGACCCGGCAGGGACAAGGCGGGCC...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGAGCTGTCTTCACTaGCAATGTTTCCATCGTCTA +
Preference number: 4 (lower is better)
Translates to: MAEGSHQGAIEDWCLALYGSCLH*QCFHRL
Trigger: TAGACGATGGAAACATTGCCAGTGAAGACAGCTCCC...ATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATGACGGCATGCTGGACTaGGAGTTCCAGTGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNDGMLD*EFQCGR
Trigger: CCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTC...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCAGACCCATCCAGAATaGGTGAGTTTTCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQEQTHPE*VSFLLL
Trigger: AAGCAACAGAAAACTCACCCATTCTGGATGGGTCTG...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATCGAGGGTCCCGGGCTTaGCTTTTTCCTGCCCGTACC +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNRGSRA*LFPART
Trigger: GGTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCG...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCGTGCACCTACGGAGAGAGAAGTaGGCCAGTAAGGGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PLRKPFCAILNNPTKVVHLRREK*ASKGEG
Trigger: GCCCTCTCCCTTACTGGCCCACTTCTCTCTCCGTAG...GTGCACGACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCGTGCACAGCAGCTTTGAGTCTTaGGCTCGGCTGAACCCCCTG +
Preference number: 4 (lower is better)
Translates to: PLRKPFCAILNNPTKVVHSSFES*ARLNPL
Trigger: CAGGGGGTTCAGCCGAGCCCAAGACTCAAAGCTGCT...GTGCACGACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp AAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGACACTTAAAGCGTTCTaGGAATATGAATCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KSARGHTVGPEPSRMSPQTLKAF*EYESLL
Trigger: CAGAAGGGATTCATATTCCCAGAACGCTTTAAGTGT...CTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGACAGGTCCTTGCAACTCCAGTaGGCTAGAATCTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: FQNVSSVRFSRGRECGDRSLQLQ*ARILIQ
Trigger: CTGGATCAAGATTCTAGCCCACTGGAGTTGCAAGGA...CCTGTCTCCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCTCATCTGATAGCACCTaGATGGGGTTTGCTATATTT +
Preference number: 4 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSASSDST*MGFAIF
Trigger: AAATATAGCAAACCCCATCCAGGTGCTATCAGATGA...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTCTGTTCGTGGAGTCTTaGAAGAACACTCCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELLFVES*KNTPLG
Trigger: CCCTAGAGGAGTGTTCTTCCAAGACTCCACGAACAG...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTTGGAAACACAGATTCTaGGGCCCATCCCAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELWKHRF*GPSQRV
Trigger: AACCCTTTGGGATGGGCCCCAGAATCTGTGTTTCCA...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp ATACCACCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCCGTCCTCCTTGTCACTaGAGCCCTGCGTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: IPPLRKPFCAILNNPTKVRPPCH*SPAWVM
Trigger: CATGACCCACGCAGGGCTTCAGTGACAAGGAGGACG...GACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGGTGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ATACCACCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCACAGCGGGTACTCCTTaGTGCGGTACTGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IPPLRKPFCAILNNPTKVTAGTP*CGTASW
Trigger: CCAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGT...GACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGGTGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CCGGGGCTAACAGTACCCTCTACGACTCCCACAGGTCTCTCTTTGTGTCCAGATCACCAGTCTTCTGGCTaGAACAGGCAATTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: PGLTVPSTTPTGLSLCPDHQSSG*NRQFLL
Trigger: TAAAAGAAATTGCCTGTTTCAGCCAGAAGACTGGTG...ATCTGGACACAAAGAGAGACCTGTGGGAGTCGTAGAGGGTACTGTTAGCCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp AGGGGAGCTAACTTCAGGAGCGAATCCAAAGTGTTAGAAGGTCCTAGAAGTCAACCTTCCGTGGTCATATaGGTGGCTCTGTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: RGANFRSESKVLEGPRSQPSVVI*VALSIS
Trigger: GCTGATGGACAGAGCCACTCATATGACCACGGAAGG...TTGACTTCTAGGACCTTCTAACACTTTGGATTCGCTCCTGAAGTTAGCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCACTTGTCATAGTCGTTaGGGTGATAGTGCATCTGTC +
Preference number: 4 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECTCHSR*GDSASV
Trigger: GACAGATGCACTATCACCGCAACGACTATGACAAGT...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTCTCCGGTGCCTAAAGTaGAGTGCGAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SELFCHTSANEQKMSHDSLRCLK*SARLCS
Trigger: ACTGCACAGCCTCGCACTGCACTTTAGGCACCGGAG...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ATCAAGGAATATTTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGTGTGCGCCACGAAGGTaGTCTGGGAGGAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IKEYFRCKLNMPRGLLFMCAPRR*SGRRCC
Trigger: ACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACA...CATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAAATATTCCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR GCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGCACACAAATGTGGTaGATGACAGTAACTGATGAT +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSCTQMW*MTVTDD
Trigger: ATCATCAGTTACTGTCATGCACCACATTTGTGTGCA...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGTCCTCTTTTGGTATCTaGACACAAATGTGGTGCATG +
Preference number: 4 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRSSFGI*TQMWCM
Trigger: CATGCACCACATTTGTGTGCAGATACCAAAAGAGGA...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAAATATGAATCCCTTCTaGACCCTGGAATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGNMNPF*TLESPV
Trigger: GACTGGTGATTCCAGGGTGCAGAAGGGATTCATATT...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GAGAGAAGTGGGCCAGTAAGGGAGAGGGCTAGAGAGAGGACACCAGTTTACATATTGCCTCTCATTCCTTaGAACTCCAGTGGGCTAGAA +
Preference number: 4 (lower is better)
Translates to: ERSGPVRERARERTPVYILPLIP*NSSGLE
Trigger: TTCTAGCCCACTGGAGTTGCAAGGAATGAGAGGCAA...TATGTAAACTGGTGTCCTCTCTCTAGCCCTCTCCCTTACTGGCCCACTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp CTAGTTGTCCCGGTTATAGCTGTGGTTAGTGTCCACCGATGGATGAGGAGATGCATGCTTCCGGCAGATTaGTCTCTTAGCCACAATTCC +
Preference number: 4 (lower is better)
Translates to: LVVPVIAVVSVHRWMRRCMLPAD*SLSHNS
Trigger: GGAATTGTGGCTAAGAGAGCAATCTGCCGGAAGCAT...GCATCTCCTCATCCATCGGTGGACACTAACCACAGCTATAACCGGGACAACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp ATTGCTCTCTTAGCCACAATTCCCTCATTTATGGCAGCAAAGCAGGCCAACGATACACCGCAGAGGACCTaGTCTTGGCCACTACACTCT +
Preference number: 4 (lower is better)
Translates to: IALLATIPSFMAAKQANDTPQRT*SWPLHS
Trigger: AGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGT...ATCGTTGGCCTGCTTTGCTGCCATAAATGAGGGAATTGTGGCTAAGAGAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp TGCACTTCCTTCTCCCTGGCAATCCATGTGGCCACACGTTCCCATGATCCGTGGTCCTCACAACTTCATTaGTTTTGGATAAGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CTSFSLAIHVATRSHDPWSSQLH*FWIRCL
Trigger: CAGACACCTTATCCAAAAGCAATGAAGTTGTGAGGA...CCACGGATCATGGGAACGTGTGGCCACATGGATTGCCAGGGAGAAGGAAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR CCA 90 bp ATACCACCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCCCTTCAGGGCTTGGGTaGGAAGGGCTGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IPPLRKPFCAILNNPTKVPSGLG*EGLAAS
Trigger: AGAAGCTGCCAGCCCTTCCCACCCAAGCCCTGAAGG...GACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGGTGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATGCTCCGAGCTCGAGTaGCTGGTGCACGACGAGCAG +
Preference number: 4 (lower is better)
Translates to: AETGNFFYASEESNRGFICSELE*LVHDEQ
Trigger: CTGCTCGTCGTGCACCAGCCACTCGAGCTCGGAGCA...TATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATGTGGCCTTGCACATCTaGGGCATCCTGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNVALHI*GILVTL
Trigger: CAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCAC...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp GTAACTCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTCCTTTACCGTGGCATTaGGGCAGTTTTTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VTQVPFPVLSQRYLSAGIPLPWH*GSFSGS
Trigger: AGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGG...AATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGAGTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATCAAGGAATATTTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGCAGCTCGACTCTCGGTaGTCTCCAGGCTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IKEYFRCKLNMPRGLLFMQLDSR*SPGCSR
Trigger: TCTGCTGCAGCCTGGAGACCACCGAGAGTCGAGCTG...CATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAAATATTCCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCCTGATAGCACCTGGATaGGGTTTGCTATATTTAGAA +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSLIAPG*GLLYLE
Trigger: TTCTAAATATAGCAAACCCCATCCAGGTGCTATCAG...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCTGGCTCTAAAGATAAACTAATCCTCGGCTCTAGCATGTTCCAGCCCTTGCAGCCCAAAGGGTTAATATaGCGGCACTCAGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: PGSKDKLILGSSMFQPLQPKGLI*RHSAAI
Trigger: GATAGCAGCTGAGTGCCGCCATATTAACCCTTTGGG...CTGCAAGGGCTGGAACATGCTAGAGCCGAGGATTAGTTTATCTTTAGAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp ATTGCTCTCTTAGCCACAATTCCCTCATTTATGGCAGCAAAGCAGGCCAACGATTGCAGTGATCCAAGATaGCACCATTGCCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IALLATIPSFMAAKQANDCSDPR*HHCPPA
Trigger: GGCTGGAGGGCAATGGTGCCATCTTGGATCACTGCA...ATCGTTGGCCTGCTTTGCTGCCATAAATGAGGGAATTGTGGCTAAGAGAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp GTCCACCGATGGATGAGGAGATGCTTCCGGCAGATTGCTCTCTTAGCCACAATTCAATTCCCTCATTTATaGCAGCAAAGCAGGCCAACG +
Preference number: 4 (lower is better)
Translates to: VHRWMRRCFRQIALLATIQFPHL*QQSRPT
Trigger: CGTTGGCCTGCTTTGCTGCCATAAATGAGGGAATTG...AATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp GAGAGAAGTGGGCCAGTAAGGGAGAGGGCTAGAGAGAGGACACCAGTTTACATATCTTGTAGTGCTCAATaGCTCTGTCTTCACAGTAGG +
Preference number: 4 (lower is better)
Translates to: ERSGPVRERARERTPVYISCSAQ*LCLHSR
Trigger: CCTACTGTGAAGACAGAGTCATTGAGCACTACAAGA...TATGTAAACTGGTGTCCTCTCTCTAGCCCTCTCCCTTACTGGCCCACTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTGCCCTGCGTGGGTCATaGACTTCCACGGAAAACTTC +
Preference number: 4 (lower is better)
Translates to: SELFCHTSANEQKMSHDSALRGS*TSTENF
Trigger: GAAGTTTTCCGTGGAAGTTCATGACCCACGCAGGGC...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCGCAGTCGGGTGGGGCTaGTGTCCACCGACCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TKISPSESLESFNNVTGIAVGWG*CPPTSW
Trigger: CCACGAGGTCGGTGGACATCAGCCCCACCCGACTGC...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCTTTCCAGTTGTGTTTaGAGCATAGCTCAAAACATG +
Preference number: 4 (lower is better)
Translates to: GSHQGAIEDWCLALYGQELSSCV*SIAQNM
Trigger: CATGTTTTGAGCTATGCTTCAAACACAACTGGAAAG...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp GAGAGAAGTGGGCCAGTAAGGGAGAGGGCTAGAGAGAGGACACCAGTTTACATAGAGGCCTTTGAAGATTaGTGGCTTTCCAGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: ERSGPVRERARERTPVYIEAFED*WLSSCV
Trigger: AACACAACTGGAAAGCCATCAATCTTCAAAGGCCTC...TATGTAAACTGGTGTCCTCTCTCTAGCCCTCTCCCTTACTGGCCCACTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGCACACAGTTCAGTCTaGCTATCCATGAATCTTCTT +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGAHSSV*LSMNLL
Trigger: AAGAAGATTCATGGATAGTCAGACTGAACTGTGTGC...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTCAAGCTACTATGCATaGTGTAGAACATGTAACCAT +
Preference number: 4 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSSSYYA*CRTCNH
Trigger: ATGGTTACATGTTCTACATCATGCATAGTAGCTTGA...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp AAAGATAAACTAATCCTCGGCTCTAGCATGTTCCAGCCCTTGCAGCTTTCCCTGCTCCTCACGGGTTGGTaGACACAGCAGTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KDKLILGSSMFQPLQLSLLLTGW*TQQYLL
Trigger: AAGAAGATACTGCTGTGTTCACCAACCCGTGAGGAG...CAGGGAAAGCTGCAAGGGCTGGAACATGCTAGAGCCGAGGATTAGTTTATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp AAAGATAAACTAATCCTCGGCTCTAGCATGTTCCAGCCCTTGCAGCTTTCCCTGTTAGTCACATCAATCTaGAGCCTCCTCACGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KDKLILGSSMFQPLQLSLLVTSI*SLLTGW
Trigger: CCAACCCGTGAGGAGGCTTCAGATTGATGTGACTAA...CAGGGAAAGCTGCAAGGGCTGGAACATGCTAGAGCCGAGGATTAGTTTATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp AAGAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTTGGCCACTACACTCTGTAGTGACATTTGAATaGCAGCTGACATGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: KRSPIVTPQRTCSWPLHSVVTFE*QLTCLS
Trigger: GCTCAAACATGTCAGCTGTCATTCAAATGTCACTAC...AGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp GTAGAGCCCCTGCCTCGATCACTAAAACACTTCTGGAACCTTCCGTGGAGACTGCAAGTGGATCACACTTaGAAAAAGGCCATTGTAGTG +
Preference number: 4 (lower is better)
Translates to: VEPLPRSLKHFWNLPWRLQVDHT*KKAIVV
Trigger: CACTACAATGGCCTTTTTTCAAGTGTGATCCACTTG...CAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGATCGAGGCAGGGGCTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp GGAGCTAACTTCAGGAGCGAATCCAAAGTGTTAGAAGGTCCTAGAAGTCAAATTGGTCTCCGATTCCCATaGACGAATCCTGCTGCCGAG +
Preference number: 4 (lower is better)
Translates to: GANFRSESKVLEGPRSQIGLRFP*TNPAAE
Trigger: CTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACC...AATTTGACTTCTAGGACCTTCTAACACTTTGGATTCGCTCCTGAAGTTAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp GCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATAGGGCACCAGCTGCACTaGCATGGTCTCCGATTCCCA +
Preference number: 4 (lower is better)
Translates to: AETGNFFYASEESNRGFIGHQLH*HGLRFP
Trigger: TGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCC...TATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GTAACTCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGTCCCTGGCTGTCAATaGCTTTCCAATAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: VTQVPFPVLSQRYLSAGIVPGCQ*LSNRKS
Trigger: TGACTTCCTATTGGAAAGGCATTGACAGCCAGGGAC...AATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGAGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATGGCCAGGTGTGTGTGTaGCCCAGCTCGACTCTCGGT +
Preference number: 4 (lower is better)
Translates to: EESNRGFISDQGLRISPYGQVCV*PSSTLG
Trigger: ACCGAGAGTCGAGCTGGGGCACACACACACCTGGCC...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AAGAGGTCTCCAATTGTGACACCGCAGAGGACCTGCTCTTGGCCACTACACTCTTTTCCTCAGCACAGCTaGATAATCTTCTCACCAACT +
Preference number: 4 (lower is better)
Translates to: KRSPIVTPQRTCSWPLHSFPQHS*IIFSPT
Trigger: AGTTGGTGAGAAGATTATGCAGCTGTGCTGAGGAAA...AGAGTGTAGTGGCCAAGAGCAGGTCCTCTGCGGTGTCACAATTGGAGACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp GCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATAGCCACGAAGGTGCTCTaGGAGGAGGTGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: AETGNFFYASEESNRGFIATKVL*EEVLYC
Trigger: GCAGTACAGCACCTCCTCCCAGAGCACCTTCGTGGC...TATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATCAGACCAAGGTGGCCTTGCACATCTaGGGCATCCTGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: AISFTHPKNPIGALYQTKVALHI*GILVTL
Trigger: CAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCAC...CTTGGTCTGATATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATGTAAGGCAGCTGACGTaGCCTTGCACATCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNVRQLT*PCTSGA
Trigger: TGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTAC...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp ATCAAGGAATATTTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGCCAGGGGACACACAGTaGGACCGGAACCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: IKEYFRCKLNMPRGLLFMPGDTQ*DRNLPE
Trigger: TTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGG...CATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAAATATTCCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATAATGTGCTTTTCCCTTaGTTTCCCATAAAAACGAAA +
Preference number: 4 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNNVLFP*FPIKTK
Trigger: TTTCGTTTTTATGGGAAACCAAGGGAAAAGCACATT...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GACAGGATTCCTCACCTGGAAACACAGAAAATGCTGACTGGTTCAGAGGGGAGCACAGAAAATGCTGACTaGTTCAGAGGGGAGCTAACT +
Preference number: 4 (lower is better)
Translates to: DRIPHLETQKMLTGSEGSTENAD*FRGELT
Trigger: AGTTAGCTCCCCTCTGAACCAGTCAGCATTTTCTGT...GCTCCCCTCTGAACCAGTCAGCATTTTCTGTGTTTCCAGGTGAGGAATCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATCCACCAAGGTGCCATTaGGGATTGGTGTCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNPPRCH*GLVSGS
Trigger: AGAGCCAGACACCAATCCTCAATGGCACCTTGGTGG...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR TCA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCCGTTACTACAAATCCTaGAAGGAAAGCAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPRYYKS*KESSFE
Trigger: CTCAAAGCTGCTTTCCTTTCAGGATTTGTAGTAACG...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATCATGCATACCACGTGTaGACTGCAATGCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNHAYHV*TAMPLC
Trigger: GCACAGCGGCATTGCAGTGCACACGTGGTATGCATG...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATGAGTCGGGCACCAGCTaGACTGCCATGGTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: EESNRGFISDQGLRISPYESGTS*TAMVSD
Trigger: ATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTC...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATCAGACCAAGTCTCGGTCAGGTCGATaGCGATCTCACTCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: AISFTHPKNPIGALYQTKSRSGR*RSHSGC
Trigger: GCAGCCTGAGTGAGATCGCCATCGACCTGACCGAGA...CTTGGTCTGATATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGACAGTTAAACACTGAATaGATCGCAATGTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGQLNTE*IAMCFS
Trigger: GGAAAAGCACATTGCGATCCATTCAGTGTTTAACTG...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTTTTTCACCAGTCTTCTaGCTGAAACAGGCAATTTCT +
Preference number: 4 (lower is better)
Translates to: RLYRGIGAVFQALYGERSFSPVF*LKQAIS
Trigger: AGAAATTGCCTGTTTCAGCCAGAAGACTGGTGAAAA...ACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTAGATTCTTGCAAAGATaGGAGAGGCAGCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELRFLQR*ERQLFN
Trigger: GTTGAAAAGCTGCCTCTCCCATCTTTGCAAGAATCT...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp CAGACAGCTGCGCTTACAAACAAACTGCTAGGTAGCAGTAGCACTTTGACAAATCGTTCCCATGATCCGTaGGGCCAGATCATGCTATTC +
Preference number: 4 (lower is better)
Translates to: QTAALTNKLLGSSSTLTNRSHDP*GQIMLF
Trigger: GAATAGCATGATCTGGCCCCACGGATCATGGGAACG...ATTTGTCAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAGCGCAGCTGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR TCA 90 bp CTGTCAGAGAAAGCACTGGCTTGGGACTCAGAGGACCGAGATTTTGAGAACTTGAGAGGACCGAGATTTTaGGAACTTGCTTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: LSEKALAWDSEDRDFENLRGPRF*ELASSV
Trigger: AACTGATGAAGCAAGTTCTCAAAATCTCGGTCCTCT...CAAGTTCTCAAAATCTCGGTCCTCTGAGTCCCAAGCCAGTGCTTTCTCTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp GCAGCTTTCCCTGAACTCACACGCCCTCAACAAATGACACGTAGCCAAGAGCTTCAAATTGTTGAGCTTTaGTATGCTGTCAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: AAFPELTRPQQMTRSQELQIVEL*YAVRES
Trigger: GCTTTCTCTGACAGCATATCAAAGCTCAACAATTTG...AAGCTCTTGGCTACGTGTCATTTGTTGAGGGCGTGTGAGTTCAGGGAAAGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp CCGAAATGGCATCATAACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGAAACACAGAAAATGCTaGCTGGTTCAGAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PKWHHNTLEAPWLFILILKHRKC*LVQRGA
Trigger: AGCTCCCCTCTGAACCAGTCAGCATTTTCTGTGTTT...CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp GGTCAGTCTGTATTCACACCTAAGGGCAAGCTAAGTTGTGAATTTGACAGAGGATGGTCACTGAGTTGGTaGGGGATGGATTCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GQSVFTPKGKLSCEFDRGWSLSW*GMDSEE
Trigger: CTCTTCTGAATCCATCCCTCACCAACTCAGTGACCA...TCCTCTGTCAAATTCACAACTTAGCTTGCCCTTAGGTGTGAATACAGACTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATACGTGTGCACTGCAATaGCGCTGTGCCCAAACGTCC +
Preference number: 4 (lower is better)
Translates to: EESNRGFISDQGLRISPYTCALQ*RCAQTS
Trigger: GGACGTTTGGGCACAGCGGCATTGCAGTGCACACGT...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GAGAGAAGTGGGCCAGTAAGGGAGAGGGCTAGAGAGAGGACACCAGTTTACATACTGCAGTTTCTTCAGTaGATTCAGATACGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ERSGPVRERARERTPVYILQFLQ*IQIRGF
Trigger: AAAACCTCGTATCTGAATGCACTGAAGAAACTGCAG...TATGTAAACTGGTGTCCTCTCTCTAGCCCTCTCCCTTACTGGCCCACTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATCAGACCAAGCAGGGGATATTCTACTaGCAGCTTGCCCGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: AISFTHPKNPIGALYQTKQGIFY*QLAREL
Trigger: GAGCTCACGGGCAAGCTGCCAGTAGAATATCCCCTG...CTTGGTCTGATATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp AACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGGCTCTAAAGATAAACGAGAAAGCACTGGCTTaGGACTCAGAGGACCGAGAT +
Preference number: 4 (lower is better)
Translates to: NTLEAPWLFILILALKINEKALA*DSEDRD
Trigger: ATCTCGGTCCTCTGAGTCCCAAGCCAGTGCTTTCTC...GTTTATCTTTAGAGCCAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR CAA 72 bp CTGGAACCTTCCGTGGAGACTGAATCTGTAAGATCCTaGTCACAAGCACCTCAGGTAATTTTGGTGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LEPSVETESVRS*SQAPQVILVQV
Trigger: CACTTGCACCAAAATTACCTGAGGTGCTTGTGACAAGGATCTTACAGATTCAGTCTCCACGGAAGGTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp GTAACTCAAGTCCCCTTTCCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTCTTTTTGTGCCATCTTaGATAACCCAACTAAAGTCG +
Preference number: 4 (lower is better)
Translates to: VTQVPFPVLSQRYLSAGILFVPS*ITQLKS
Trigger: CGACTTTAGTTGGGTTATTCAAGATGGCACAAAAAG...AATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGGAAAGGGGACTTGAGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp CTGTCAGAGAAAGCACTGGCTTGGGACTCAGAGGACCGAGATTTTGAGAACTTGTCAGTTTCACTTATGTaGCCATTGACAGTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LSEKALAWDSEDRDFENLSVSLM*PLTVSQ
Trigger: TTGGGAAACTGTCAATGGTCACATAAGTGAAACTGA...CAAGTTCTCAAAATCTCGGTCCTCTGAGTCCCAAGCCAGTGCTTTCTCTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp TCTTCCCAGACAGCTGCGCTTACAAACAAACTGCTAGGTAGCAGTAGCACTTTGGATCCTTTGTTTCTTTaGATTCAGCCAACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSQTAALTNKLLGSSSTLDPLFL*IQPTSW
Trigger: CCAGCTTGTTGGCTGAATTCAAAGAAACAAAGGATC...CAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAGCGCAGCTGTCTGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR GCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATCGGTGGTCTCCAGGCTaGAGCAGAAGGAATACCTTG +
Preference number: 4 (lower is better)
Translates to: EESNRGFISDQGLRISPYRWSPG*SRRNTL
Trigger: CAAGGTATTCCTTCTGCTGCAGCCTGGAGACCACCG...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GGAGGGAGGGTGGAGTGTGATGGGCTCTTACTGTCTCCATTCGGTTTTGTCTTACTCCAAGAAGCTAAATaGATTAACTTGTTGCACATC +
Preference number: 4 (lower is better)
Translates to: GGRVECDGLLLSPFGFVLLQEAK*INLLHI
Trigger: GATGTGCAACAAGTTAATGCATTTAGCTTCTTGGAG...TAAGACAAAACCGAATGGAGACAGTAAGAGCCCATCACACTCCACCCTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp GCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATCAGACCAAGGCACCAGGCAGTCACTaGAGATCAGCAAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: AISFTHPKNPIGALYQTKAPGSH*RSANAL
Trigger: AAGGGCATTTGCTGATCTCCAGTGACTGCCTGGTGC...CTTGGTCTGATATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATAGCACCGCTCGCAATCTaGTCAGTGTCTTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: AETGNFFYASEESNRGFIAPLAI*SVSSLL
Trigger: CAGCAAAGAAGACACTGACCAGATTGCGAGCGGTGC...TATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATTTGAGGATTGGTGTCTaGCTCTCTATGGGCAAGAGC +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNLRIGV*LSMGKS
Trigger: GCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAA...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CCA 90 bp ATCAAGGAATATTTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGTCCTCGCCTTTACCGTaGCATTGGGGCAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: IKEYFRCKLNMPRGLLFMSSPLP*HWGSFS
Trigger: TGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGA...CATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAAATATTCCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp CCGAAATGGCATCATAACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGAAAGCACCTGGGAACTaGATGGAAACACAGATTCTG +
Preference number: 4 (lower is better)
Translates to: PKWHHNTLEAPWLFILILKAPGN*METQIL
Trigger: CAGAATCTGTGTTTCCATCCAGTTCCCAGGTGCTTT...CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR CAA 72 bp AGAAAGCACTGGCTTGGGACTCAGAGGACCGAGATTTaGAGAACTTGCTTCATCAGTTTCACTTATGTGACC +
Preference number: 4 (lower is better)
Translates to: RKHWLGTQRTEI*RTCFISFTYVT
Trigger: GGTCACATAAGTGAAACTGATGAAGCAAGTTCTCAAAATCTCGGTCCTCTGAGTCCCAAGCCAGTGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR CAA 72 bp TTGACAAATGGAGCACAACCCGGATCCTTTGTTTCTTaGAATTCAGCCAACAAGCTGGCATTCCAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LTNGAQPGSFVS*NSANKLAFQKL
Trigger: GAGCTTCTGGAATGCCAGCTTGTTGGCTGAATTCAAAGAAACAAAGGATCCGGGTTGTGCTCCATTTGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
3UTR CAA 72 bp GCGCTTACAAACAAACTGCTAGGTAGCAGTAGCACTTaGACAAATGGAGCACAACCCGGATCCTTTGTTTCT +
Preference number: 4 (lower is better)
Translates to: ALTNKLLGSSST*TNGAQPGSFVS
Trigger: AGAAACAAAGGATCCGGGTTGTGCTCCATTTGTCAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR TCA 90 bp CCGAAATGGCATCATAACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGTTTCTTGAGAAATCCTaGAGCCAGTTATCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PKWHHNTLEAPWLFILILFLEKS*SQLSSS
Trigger: TGAGGACGATAACTGGCTTCAGGATTTCTCAAGAAA...CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATTTTTCAACCCTGCTCTaGCTGTTGGCTAGTAGACAC +
Preference number: 4 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNFSTLL*LLASRH
Trigger: GTGTCTACTAGCCAACAGGCAGAGCAGGGTTGAAAA...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AATCTAGCTGTCCTGAAGGTGAGCCTTTATAATCTAAGAACCGAAATGGCATCAATGGCGGCACTCAGCTaGTATCCAGGACTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NLAVLKVSLYNLRTEMASMAALS*YPGLFP
Trigger: AGGAAAAAGTCCTGGATAGCAGCTGAGTGCCGCCAT...TGATGCCATTTCGGTTCTTAGATTATAAAGGCTCACCTTCAGGACAGCTAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CCA 90 bp GGTCAGTCTGTATTCACACCTAAGGGCAAGCTAAGTTGTGAATTTGACAGAGGATCACTAAAACACTTCTaGAACCTTCCGTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: GQSVFTPKGKLSCEFDRGSLKHF*NLPWRL
Trigger: CAGTCTCCACGGAAGGTTCCAGAAGTGTTTTAGTGA...TCCTCTGTCAAATTCACAACTTAGCTTGCCCTTAGGTGTGAATACAGACTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR TCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATTCATCAGTACTTTGGTaGGGTGGAGACTCAGACCCA +
Preference number: 4 (lower is better)
Translates to: EESNRGFISDQGLRISPYSSVLW*GGDSDP
Trigger: TGGGTCTGAGTCTCCACCTCACCAAAGTACTGATGA...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCCCAGCCACCATGGTATaGCCTGCTTGTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: TKISPSESLESFNNVTGIPATMV*PACPSL
Trigger: CAGTGAAGGACAAGCAGGGCATACCATGGTGGCTGG...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp AACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGGCTCTAAAGATAAACACCCTTGAAGCCCCTTaGTTATTCATCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: NTLEAPWLFILILALKINTLEAP*LFILIL
Trigger: CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGT...GTTTATCTTTAGAGCCAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
3UTR CAA 72 bp AGCATACCACCTCTGCGGAAACCTTTTTGTGCCATCTaGAATAACCCAACTAAAGTCGTGCACTTGTTACTA +
Preference number: 4 (lower is better)
Translates to: SIPPLRKPFCAI*NNPTKVVHLLL
Trigger: TAGTAACAAGTGCACGACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGGTGGTATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTCTCTGTCCCCCAAGTTaGAAATATAACCCAAATCTT +
Preference number: 4 (lower is better)
Translates to: SELFCHTSANEQKMSHDSLCPPS*KYNPNL
Trigger: AAGATTTGGGTTATATTTTCAACTTGGGGGACAGAG...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR TCA 90 bp ATGCTTCCGGCAGATTGCTCTCTTAGCCACAATTCCCTCATTTATGGCAGCAAACATTGTAGTGACATTTaGATGACAGCTGACATGTTT +
Preference number: 4 (lower is better)
Translates to: MLPADCSLSHNSLIYGSKHCSDI*MTADMF
Trigger: AAACATGTCAGCTGTCATTCAAATGTCACTACAATG...TTTGCTGCCATAAATGAGGGAATTGTGGCTAAGAGAGCAATCTGCCGGAAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATATTGTGGTCCTCCGATaGATTTCTGGTGTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: EESNRGFISDQGLRISPYIVVLR*ISGVEN
Trigger: GTTCTCGACACCAGAAATGCATCGGAGGACCACAAT...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp TCTTCTCACCAACTCTACGACTGTTGCATTCTAGAGATTGAAAACATCAAACCAGCAGAGATTGGAGATTaGAGTGATCCAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: SSHQLYDCCILEIENIKPAEIGD*SDPRWH
Trigger: GTGCCATCTTGGATCACTGCAATCTCCAATCTCTGC...TGGTTTGATGTTTTCAATCTCTAGAATGCAACAGTCGTAGAGTTGGTGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CCA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTATCTGCACACAAATGTaGTGCATGACAGTAACTGAT +
Preference number: 4 (lower is better)
Translates to: SELFCHTSANEQKMSHDSICTQM*CMTVTD
Trigger: ATCAGTTACTGTCATGCACCACATTTGTGTGCAGAT...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTTCTTTCCTCCTCTTTTaGTATCTGCACACAAATGTG +
Preference number: 4 (lower is better)
Translates to: SELFCHTSANEQKMSHDSSFLLF*YLHTNV
Trigger: CACATTTGTGTGCAGATACCAAAAGAGGAGGAAAGA...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CCA 90 bp GGAGCTAACTTCAGGAGCGAATCCAAAGTGTTAGAAGGTCCTAGAAGTCAAATTACTTTTTCCTGTTCGTaGAGTCTTGGAAGAACACTC +
Preference number: 4 (lower is better)
Translates to: GANFRSESKVLEGPRSQITFSCS*SLGRTL
Trigger: GAGTGTTCTTCCAAGACTCCACGAACAGGAAAAAGT...AATTTGACTTCTAGGACCTTCTAACACTTTGGATTCGCTCCTGAAGTTAGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR TCA 90 bp GCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATCAGACCAAGCTAACGAACAGAAAATaGGCCACGACAGTTAAACAC +
Preference number: 4 (lower is better)
Translates to: AISFTHPKNPIGALYQTKLTNRK*ATTVKH
Trigger: GTGTTTAACTGTCGTGGCTCATTTTCTGTTCGTTAG...CTTGGTCTGATATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp AACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGGCTCTAAAGATAAACAGTATCTTCTTTCGCTaGCTGAGATTCTTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NTLEAPWLFILILALKINSIFFR*LRFLQR
Trigger: TCTTTGCAAGAATCTCAGGCAGCGAAAGAAGATACT...GTTTATCTTTAGAGCCAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR GCA 90 bp TCCGTGGAGACTGAATCTGTAAGATCCTTGTCACAAGCACCTCAGGTAATTTTGCAACTCTACGACTGTTaGATTCTAGAGATTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SVETESVRSLSQAPQVILQLYDC*ILEIEN
Trigger: GTTTTCAATCTCTAGAATGCAACAGTCGTAGAGTTG...CAAAATTACCTGAGGTGCTTGTGACAAGGATCTTACAGATTCAGTCTCCACGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR GCA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCGATGGACTTGATCAATaGCGGACATGCATACCACGT +
Preference number: 4 (lower is better)
Translates to: TKISPSESLESFNNVTGIDGLDQ*RTCIPR
Trigger: ACGTGGTATGCATGTCCGGCATTGATCAAGTCCATC...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCGGTATCTCTTTATCCTaGAGGTGTACACTTAAAGCG +
Preference number: 4 (lower is better)
Translates to: TKISPSESLESFNNVTGIGISLS*RCTLKA
Trigger: CGCTTTAAGTGTACACCTGCAGGATAAAGAGATACC...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR GCA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATACCCAACTAAAGTCGTaGACTTGTTACTATAAAAGT +
Preference number: 4 (lower is better)
Translates to: EESNRGFISDQGLRISPYTQLKS*TCYYKS
Trigger: ACTTTTATAGTAACAAGTGCACGACTTTAGTTGGGT...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp CTGCCCGAGCTGGCTGAGCCCAGTGCGCCCGCCGCCCGCTGCCGCTaGCTCTGCCTCTGGCGCGCCTTGGACGGCGAGTCCTCGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LPELAEPSAPAARCR*LCLWRALDGESSAS
Trigger: GCTGGCCGAGGACTCGCCGTCCAAGGCGCGCCAGAGGCAGAGGCAGCGGCAGCGGGCGGCGGGCGCACTGGGCTCAGCCAGCTCGGGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp TTGTCGTGGGCGCCCTCGCGGCCCAGCGACGGAGTCCGCAGGATCTaGGATCGCGACGGCGTCAGGCGGCCCGTGTCGCCCTCGTCGCCG +
Preference number: 5 (lower is better)
Translates to: LSWAPSRPSDGVRRI*DRDGVRRPVSPSSP
Trigger: CGGCGACGAGGGCGACACGGGCCGCCTGACGCCGTCGCGATCGCAGATCCTGCGGACTCCGTCGCTGGGCCGCGAGGGCGCCCACGACAA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp TGGCGCAGCTCGTCTGAGACGGCGGCACGGCCCGCGCCCTTGTCGTaGGCGCCCTCGCGGCCCAGCGACGGAGTCCGCAGGATCTGCGAT +
Preference number: 5 (lower is better)
Translates to: WRSSSETAARPAPLS*APSRPSDGVRRICD
Trigger: ATCGCAGATCCTGCGGACTCCGTCGCTGGGCCGCGAGGGCGCCCACGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 90 bp CTTGTGCGAGGCGGTGGAACGCTGGTACCACTGGCGCAGCTCGTCTaGGACGGCGGCACGGCCCGCGCCCTTGTCGTGGGCGCCCTCGCG +
Preference number: 5 (lower is better)
Translates to: LVRGGGTLVPLAQLV*DGGTARALVVGALA
Trigger: CGCGAGGGCGCCCACGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 90 bp AGAGGTGGAGACCGGGGAGAGGGACCCAGCAGGGAAGGCGGCGGGTaGGGGGAGAGGAGCGAGAGGAGCGAGCGCTCAGGAGGGAGCGGT +
Preference number: 5 (lower is better)
Translates to: RGGDRGEGPSREGGG*GERSERSERSGGSG
Trigger: ACCGCTCCCTCCTGAGCGCTCGCTCCTCTCGCTCCTCTCCCCTCACCCGCCGCCTTCCCTGCTGGGTCCCTCTCCCCGGTCTCCACCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477221.2
ENST00000492155.5
CDS CCA 90 bp AGGCGGCTGTGCTCCTTGTGCGAGGCGGTGGAACGCTGGTACCACTaGCGCAGCTCGTCTGAGACGGCGGCACGGCCCGCGCCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: RRLCSLCEAVERWYH*RSSSETAARPAPLS
Trigger: CGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp GTGTGCGACAGGCGGCTGTGCTCCTTGTGCGAGGCGGTGGAACGCTaGTACCACTGGCGCAGCTCGTCTGAGACGGCGGCACGGCCCGCG +
Preference number: 5 (lower is better)
Translates to: VCDRRLCSLCEAVER*YHWRSSSETAARPA
Trigger: CGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS GCA 90 bp GGACGTAGTGGGGACTCCGGACCCGCAGGTCTGGCGTGGACGGCATaGTGGACTGGGAGTTCCAGTGCGGGAGGCCGCGGATGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GRSGDSGPAGLAWTA*WTGSSSAGGRGWGC
Trigger: ACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCCACTACGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp GAGCCGCTGTCCGAGGAGGTGGAGCTGGTGTGCGACAGGCGGCTGTaGTCCTTGTGCGAGGCGGTGGAACGCTGGTACCACTGGCGCAGC +
Preference number: 5 (lower is better)
Translates to: EPLSEEVELVCDRRL*SLCEAVERWYHWRS
Trigger: GCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCGGCTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp TGGGGACTCCGGACCCGCAGGTCTGGCGTGGACGGCATGCTGGACTaGGAGTTCCAGTGCGGGAGGCCGCGGATGGGGCTGTTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: WGLRTRRSGVDGMLD*EFQCGRPRMGLFCK
Trigger: CTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp CGTAGTGGGGACTCCGGACCCGCAGGTCTGGCGTGGACGGCATGCTaGACTGGGAGTTCCAGTGCGGGAGGCCGCGGATGGGGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: RSGDSGPAGLAWTAC*TGSSSAGGRGWGCS
Trigger: AGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCCACTACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp GAGGTGCTGTACTGCGAGCCGCTGTCCGAGGAGGTGGAGCTGGTGTaGGACAGGCGGCTGTGCTCCTTGTGCGAGGCGGTGGAACGCTGG +
Preference number: 5 (lower is better)
Translates to: EVLYCEPLSEEVELV*DRRLCSLCEAVERW
Trigger: CCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCGGCTCGCAGTACAGCACCTC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp TCGTGGAATGGACGTAGTGGGGACTCCGGACCCGCAGGTCTGGCGTaGACGGCATGCTGGACTGGGAGTTCCAGTGCGGGAGGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: SWNGRSGDSGPAGLA*TACWTGSSSAGGRG
Trigger: TCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCCACTACGTCCATTCCACGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp CGACCTCGTGGAATGGACGTAGTGGGGACTCCGGACCCGCAGGTCTaGCGTGGACGGCATGCTGGACTGGGAGTTCCAGTGCGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: RPRGMDVVGTPDPQV*RGRHAGLGVPVREA
Trigger: GGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCCACTACGTCCATTCCACGAGGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp GCCTCTGCCTCTGGCGCGCCTTGGACGGCGAGTCCTCGGCCAGCGTaGAGTAGTTGGCGTTCATCTGCGCCGGGTAGTAGTGCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: ASASGAPWTASPRPA*SSWRSSAPGSSAPS
Trigger: GCTCGGAGCACTACTACCCGGCGCAGATGAACGCCAACTACTCCACGCTGGCCGAGGACTCGCCGTCCAAGGCGCGCCAGAGGCAGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp TGGAGCTGGTGTGCGACAGGCGGCTGTGCTCCTTGTGCGAGGCGGTaGAACGCTGGTACCACTGGCGCAGCTCGTCTGAGACGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: WSWCATGGCAPCARR*NAGTTGAARLRRRH
Trigger: GTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp GGGAGGAGGTGCTGTACTGCGAGCCGCTGTCCGAGGAGGTGGAGCTaGTGTGCGACAGGCGGCTGTGCTCCTTGTGCGAGGCGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GRRCCTASRCPRRWS*CATGGCAPCARRWN
Trigger: GTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCGGCTCGCAGTACAGCACCTCCTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp TGCTCTGGGAGGAGGTGCTGTACTGCGAGCCGCTGTCCGAGGAGGTaGAGCTGGTGTGCGACAGGCGGCTGTGCTCCTTGTGCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: CSGRRCCTASRCPRR*SWCATGGCAPCARR
Trigger: CCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCGGCTCGCAGTACAGCACCTCCTCCCAGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 90 bp CCACCACGGGCGTGGCGCCGCCCTCGATGTACAGCGGGTACTCCTTaGTGCGGTACTGCGAGCTGGGCTGGCTCTGGCTGTGCAGGTACA +
Preference number: 5 (lower is better)
Translates to: PPRAWRRPRCTAGTP*CGTASWAGSGCAGT
Trigger: TGTACCTGCACAGCCAGAGCCAGCCCAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGTACATCGAGGGCGGCGCCACGCCCGTGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 90 bp TCCCCTCTCCCGGGTGGCGCCTCTGCACCGCCACCCGGTCTAACTTaGATCCCCAGCGCCTGCAAAGCGCCGTTCCTGGAGAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SPLPGGASAPPPGLT*IPSACKAPFLEKPA
Trigger: AGCAGGCTTCTCCAGGAACGGCGCTTTGCAGGCGCTGGGGATTCAAGTTAGACCGGGTGGCGGTGCAGAGGCGCCACCCGGGAGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS GCA 90 bp TCCGAGGAGGTGGAGCTGGTGTGCGACAGGCGGCTGTGCTCCTTGTaGGAGGCGGTGGAACGCTGGTACCACTGGCGCAGCTCGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SEEVELVCDRRLCSL*EAVERWYHWRSSSE
Trigger: CTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp TGGACGGCATGCTGGACTGGGAGTTCCAGTGCGGGAGGCCGCGGATaGGGCTGTTCTGCAAGGAGTTGCTTCCTCCGCCGGCTTCCGCAC +
Preference number: 5 (lower is better)
Translates to: WTACWTGSSSAGGRG*GCSARSCFLRRLPH
Trigger: GTGCGGAAGCCGGCGGAGGAAGCAACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp TCTGGCGCGCCTTGGACGGCGAGTCCTCGGCCAGCGTGGAGTAGTTaGCGTTCATCTGCGCCGGGTAGTAGTGCTCCGAGCTCGAGTGGC +
Preference number: 5 (lower is better)
Translates to: SGAPWTASPRPAWSS*RSSAPGSSAPSSSG
Trigger: GCCACTCGAGCTCGGAGCACTACTACCCGGCGCAGATGAACGCCAACTACTCCACGCTGGCCGAGGACTCGCCGTCCAAGGCGCGCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp ACTCCAGACTCCAGCCGGGGACAGCTGGGTGTGGAGGAGCGGATGTaGAGGCAACGCCAGCAGCACAAACAGCAGCTCTCCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: TPDSSRGQLGVEERM*RQRQQHKQQLSSRP
Trigger: CGGCCGGGAGGAGAGCTGCTGTTTGTGCTGCTGGCGTTGCCTCCACATCCGCTCCTCCACACCCAGCTGTCCCCGGCTGGAGTCTGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS TCA 90 bp CCAGCCATGCTCAGGGGGCGTCCCTCCAGCTGGCCTCTGCCTACCTaGAGACAGCAGGCTGCCGCTGCTGCCGCTGATGATCTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PAMLRGRPSSWPLPT*RQQAAAAAADDLPL
Trigger: AAGGGGAAGATCATCAGCGGCAGCAGCGGCAGCCTGCTGTCTTCAGGTAGGCAGAGGCCAGCTGGAGGGACGCCCCCTGAGCATGGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000492155.5
CDS GCA 90 bp AGTTCCAGTGCGGGAGGCCGCGGATGGGGCTGTTCTGCAAGGAGTTaGTTCCTCCGCCGGCTTCCGCACAGCTTCCTGTGCTGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: SSSAGGRGWGCSARS*FLRRLPHSFLCWGS
Trigger: GCTTCCCCAGCACAGGAAGCTGTGCGGAAGCCGGCGGAGGAAGCAACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp CTGGACTGGGAGTTCCAGTGCGGGAGGCCGCGGATGGGGCTGTTCTaGAAGGAGTTGCTTCCTCCGCCGGCTTCCGCACAGCTTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LDWEFQCGRPRMGLF*KELLPPPASAQLPV
Trigger: CACAGGAAGCTGTGCGGAAGCCGGCGGAGGAAGCAACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp ACCCGCAGGTCTGGCGTGGACGGCATGCTGGACTGGGAGTTCCAGTaGGGGAGGCCGCGGATGGGGCTGTTCTGCAAGGAGTTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: TRRSGVDGMLDWEFQ*GRPRMGLFCKELLP
Trigger: AGGAAGCAACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp GCTGACGTGGCCTTGCACATCTGGGGCATCCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGGGAGGAGGTGCTGTACTGCGAGCCG +
Preference number: 5 (lower is better)
Translates to: ADVALHIWGILVTLL*ATKVLWEEVLYCEP
Trigger: CGGCTCGCAGTACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCACGTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp AAGTCGGGGCTCCCGGTGTCGTTTTCCGAGCCCAGGAGCTTGCCCTaGGACTCCAGGCTGGAGCTCCGGTGCCTAAAGTGCAGTGCGAGG +
Preference number: 5 (lower is better)
Translates to: KSGLPVSFSEPRSLP*DSRLELRCLKCSAR
Trigger: CCTCGCACTGCACTTTAGGCACCGGAGCTCCAGCCTGGAGTCCCAGGGCAAGCTCCTGGGCTCGGAAAACGACACCGGGAGCCCCGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp ATCTGGGGCATCCTGGTGACCCTGCTGTGCGCCACGAAGGTGCTCTaGGAGGAGGTGCTGTACTGCGAGCCGCTGTCCGAGGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: IWGILVTLLCATKVL*EEVLYCEPLSEEVE
Trigger: CTCCACCTCCTCGGACAGCGGCTCGCAGTACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 90 bp CTTCCAGCCGGGGAACTCCAGACTCCAGCCGGGGACAGCTGGGTGTaGAGGAGCGGATGTGGAGGCAACGCCAGCAGCACAAACAGCAGC +
Preference number: 5 (lower is better)
Translates to: LPAGELQTPAGDSWV*RSGCGGNASSTNSS
Trigger: GCTGCTGTTTGTGCTGCTGGCGTTGCCTCCACATCCGCTCCTCCACACCCAGCTGTCCCCGGCTGGAGTCTGGAGTTCCCCGGCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CCA 90 bp TCCCAGCTTCCAGCCGGGGAACTCCAGACTCCAGCCGGGGACAGCTaGGTGTGGAGGAGCGGATGTGGAGGCAACGCCAGCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: SQLPAGELQTPAGDS*VWRSGCGGNASSTN
Trigger: GTTTGTGCTGCTGGCGTTGCCTCCACATCCGCTCCTCCACACCCAGCTGTCCCCGGCTGGAGTCTGGAGTTCCCCGGCTGGAAGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CCA 90 bp CCTGCAAAGCGCCGTTCCTGGAGAAGCCTGCTCCTCTCCTCGCCCTaGTCCCCTCTCTCTTTCTCCCTCTCCCGCGCTCTCTCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PAKRRSWRSLLLSSP*SPLSFSLSRALSPP
Trigger: GGGAGGAGAGAGAGCGCGGGAGAGGGAGAAAGAGAGAGGGGACCAGGGCGAGGAGAGGAGCAGGCTTCTCCAGGAACGGCGCTTTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS-3UTR CAA 90 bp GTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCCCGCGCGCCGCCAGGTaGGGCATGCTGCCCGAGCTG +
Preference number: 5 (lower is better)
Translates to: VGLRMGGRLDTAESSFWVPRAAR*GMLPEL
Trigger: CAGCTCGGGCAGCATGCCCAACCTGGCGGCGCGCGG...GACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCCGCGCCAGCTCTCCTaGAACAGGCCGCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTPRQLS*NRPPAV
Trigger: CACGGCGGGCGGCCTGTTCAAGGAGAGCTGGCGCGG...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS GCA 90 bp GACTCCAGGCTGGAGCTCCGGTGCCTAAAGTGCAGTGCGAGGCTGTaGAGTCGGGTGGGGCTGATGTCCACCGACCTCGTGGAATGGACG +
Preference number: 5 (lower is better)
Translates to: DSRLELRCLKCSARL*SRVGLMSTDLVEWT
Trigger: CGTCCATTCCACGAGGTCGGTGGACATCAGCCCCACCCGACTGCACAGCCTCGCACTGCACTTTAGGCACCGGAGCTCCAGCCTGGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp TGGCGTTCATCTGCGCCGGGTAGTAGTGCTCCGAGCTCGAGTGGCTaGTGCACGACGAGCAGTCGTCCATGGGGTCTGAGCCGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: WRSSAPGSSAPSSSG*CTTSSRPWGLSRCC
Trigger: GCAGCAACGGCTCAGACCCCATGGACGACTGCTCGTCGTGCACCAGCCACTCGAGCTCGGAGCACTACTACCCGGCGCAGATGAACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp TTTTGCGCTTCCAAGGGATCCGAGGAACTTCTGGCTGCAAGCGGCTaGTACCCCGGAACGGGCGTCCCATTCGCCCGGGCGAAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: FCASKGSEELLAASG*YPGTGVPFARAKAL
Trigger: AAGGGCCTTCGCCCGGGCGAATGGGACGCCCGTTCCGGGGTACCAGCCGCTTGCAGCCAGAAGTTCCTCGGATCCCTTGGAAGCGCAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649099.1
CDS-3UTR CAA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCCCGCGCCAGCTCTCCTaGAACAGGCCGCCCGCCGTG +
Preference number: 5 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSPRQLS*NRPPAV
Trigger: CACGGCGGGCGGCCTGTTCAAGGAGAGCTGGCGCGG...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 90 bp GAGGTAAGGCAGCTGACGTGGCCTTGCACATCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGAAGGTGCTCTGGGAGGAGGTGCTGT +
Preference number: 5 (lower is better)
Translates to: EVRQLTWPCTSGASW*PCCAPRRCSGRRCC
Trigger: ACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGCCTTACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS GCA 90 bp CCAGCTGCACTGCCATGGTCTCCGATTCCCATGCACGAATCCTGCTaGCGAGTCAGTCCTCCTGGGCCCCGGGTGGCTACAGAGCATCCA +
Preference number: 5 (lower is better)
Translates to: PAALPWSPIPMHESC*RVSPPGPRVATEHP
Trigger: TGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357447.7
ENST00000475141.2
ENST00000493380.5
CDS GCA 90 bp GCACCAGCTGCACTGCCATGGTCTCCGATTCCCATGCACGAATCCTaGTGCCGAGTCAGTCCTCCTGGGCCCCGGGTGGCTACAGAGCAT +
Preference number: 5 (lower is better)
Translates to: APAALPWSPIPMHES*CRVSPPGPRVATEH
Trigger: ATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357447.7
ENST00000475141.2
ENST00000493380.5
CDS GCA 90 bp CCCTCCGTCATCATCAGCAGGCCGAGAGCTGAGTCGGGCACCAGCTaGACTGCCATGGTCTCCGATTCCCATGCACGAATCCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: PSVIISRPRAESGTS*TAMVSDSHARILLP
Trigger: CGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGATGACGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp CGTTCATCTGCGCCGGGTAGTAGTGCTCCGAGCTCGAGTGGCTGGTaGACGACGAGCAGTCGTCCATGGGGTCTGAGCCGTTGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: RSSAPGSSAPSSSGW*TTSSRPWGLSRCCY
Trigger: GTAGCAGCAACGGCTCAGACCCCATGGACGACTGCTCGTCGTGCACCAGCCACTCGAGCTCGGAGCACTACTACCCGGCGCAGATGAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp GTGGCTCTGTCCATCAGCAGGCCGAGAGCTGAGTCGGGCACCAGCTaGACTGCCATGGTCTCCGATTCCCATGCACGAATCCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: VALSISRPRAESGTS*TAMVSDSHARILLP
Trigger: CGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGGACAGAGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 90 bp AGTGCTCCGAGCTCGAGTGGCTGGTGCACGACGAGCAGTCGTCCATaGGGTCTGAGCCGTTGCTGCTACGAGTCCGCGGGGTGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: SAPSSSGWCTTSSRP*GLSRCCYESAGCRS
Trigger: ACTTCTACACCCCGCGGACTCGTAGCAGCAACGGCTCAGACCCCATGGACGACTGCTCGTCGTGCACCAGCCACTCGAGCTCGGAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp TCTGCAAGGAGTTGCTTCCTCCGCCGGCTTCCGCACAGCTTCCTGTaGTGGGGAAGCGCTTGTGGCTGCTGGAATGGCTGTGAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SARSCFLRRLPHSFL*WGSACGCWNGCERS
Trigger: GCTCCTCTCACAGCCATTCCAGCAGCCACAAGCGCTTCCCCAGCACAGGAAGCTGTGCGGAAGCCGGCGGAGGAAGCAACTCCTTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp AACTTGAATCCCCAGCGCCTGCAAAGCGCCGTTCCTGGAGAAGCCTaGTCCTCTCCTCGCCCTGGTCCCCTCTCTCTTTCTCCCTCTCCC +
Preference number: 5 (lower is better)
Translates to: NLNPQRLQSAVPGEA*SSPRPGPLSLSPSP
Trigger: GGGAGAGGGAGAAAGAGAGAGGGGACCAGGGCGAGGAGAGGAGCAGGCTTCTCCAGGAACGGCGCTTTGCAGGCGCTGGGGATTCAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS CCA 90 bp CCATCAGCAGGCCGAGAGCTGAGTCGGGCACCAGCTGCACTGCCATaGTCTCCGATTCCCATGCACGAATCCTGCTGCCGAGTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: PSAGRELSRAPAALP*SPIPMHESCCRVSP
Trigger: AGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CAA 90 bp CTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTGAGGCGGCTGTGCTCCTaGTGCGAGGCGGTGGAACGC +
Preference number: 5 (lower is better)
Translates to: LRMGGRLDTAESSFWVTLRRLCS*CEAVER
Trigger: GCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCT...CAGGGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 90 bp TTGGGGTCACTGGCTAGGCGGCGGGCGGCCTCCGTAATCTGGGACTaGATGGCAAACTCTCGTTCCAGGCGTTCCAGCTCAGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LGSLARRRAASVIWD*MANSRSRRSSSASS
Trigger: AGAGGAAGCTGAGCTGGAACGCCTGGAACGAGAGTTTGCCATTCAGTCCCAGATTACGGAGGCCGCCCGCCGCCTAGCCAGTGACCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS TCA 90 bp AGCCTGCACGACACAGTGAGACTCCATCATCAGCAGGCCGAGAGCTaGGTCGGGCACCAGCTGCACTGCCATGGTCTCCGATTCCCATGC +
Preference number: 5 (lower is better)
Translates to: SLHDTVRLHHQQAES*VGHQLHCHGLRFPC
Trigger: GCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGATGGAGTCTCACTGTGTCGTGCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS CCA 90 bp GTTCCTCCAGCCTCTGACGCAGGGTTTCCTCCAGAGCTTCCTGCCTaGACTTCAAGGCAGCCAGCATGTCCTTCTTGGCCGACTGCGAGC +
Preference number: 5 (lower is better)
Translates to: VPPASDAGFPPELPA*TSRQPACPSWPTAS
Trigger: GCTCGCAGTCGGCCAAGAAGGACATGCTGGCTGCCTTGAAGTCCAGGCAGGAAGCTCTGGAGGAAACCCTGCGTCAGAGGCTGGAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 90 bp CCATGCACGAATCCTGCTGCCGAGTCAGTCCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAGCACCGCTCGCAATCTGGTCAGTGT +
Preference number: 5 (lower is better)
Translates to: PCTNPAAESVLLGPG*LQSIQKHRSQSGQC
Trigger: ACACTGACCAGATTGCGAGCGGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp GTCTCCGATTCCCATGCACGAATCCTGCTGCCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGAGCATCCAAAAGCACCGCTCGCAAT +
Preference number: 5 (lower is better)
Translates to: VSDSHARILLPSQSS*APGGYRASKSTARN
Trigger: ATTGCGAGCGGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp TCATCAGCAGGCCGAGAGCTGAGTCGGGCACCAGCTGCACTGCCATaGTCTCCGATTCCCATGCACGAATCCTGCTGCCGAGTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: SSAGRELSRAPAALP*SPIPMHESCCRVSP
Trigger: AGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000493380.5
CDS CCA 90 bp GTCTCCGATTCCCATGCACGAATCCTGCTGCCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGAGCATCCAAAAGCACCTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: VSDSHARILLPSQSS*APGGYRASKSTWEL
Trigger: CAGTTCCCAGGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 90 bp CGCCAGCAGCACAAACAGCAGCTCTCCTCCCGGCCGGCAGACACATaGAAGGACAGCCTCTTTCAGCCTCATTCAGCCGCGAGCCAGAAA +
Preference number: 5 (lower is better)
Translates to: RQQHKQQLSSRPADT*KDSLFQPHSAASQK
Trigger: TTTCTGGCTCGCGGCTGAATGAGGCTGAAAGAGGCTGTCCTTCCATGTGTCTGCCGGCCGGGAGGAGAGCTGCTGTTTGTGCTGCTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS-3UTR CAA 90 bp GTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCATGGGGTCTGAGCCGTaGCTGCTACGAGTCCGCGGG +
Preference number: 5 (lower is better)
Translates to: VGLRMGGRLDTAESSFWVMGSEP*LLRVRG
Trigger: CCCGCGGACTCGTAGCAGCAACGGCTCAGACCCCAT...GACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGGCGGCTGTGCTCCTaGTGCGAGGCGGTGGAACGC +
Preference number: 5 (lower is better)
Translates to: RNLPECLLSQVFKGEGMRRRLCS*CEAVER
Trigger: GCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCT...CCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 90 bp AGTGATCCAAGATGGCACCATTGCCCTCCAGCCTGCACGACACAGTaGGACTCCATCATCAGCAGGCCGAGAGCTGAGTCGGGCACCAGC +
Preference number: 5 (lower is better)
Translates to: SDPRWHHCPPACTTQ*DSIISRPRAESGTS
Trigger: GCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGATGGAGTCTCACTGTGTCGTGCAGGCTGGAGGGCAATGGTGCCATCTTGGATCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS GCA 90 bp AGCGCCCACGAAGCAGCATCTCTAGCTTTCTTCCATCTGTCCCTCTaGACAGCTGGCTCAGCGAGACTGCCGTGTCCCGCTTGTGGGCAA +
Preference number: 5 (lower is better)
Translates to: SAHEAASLAFFHLSL*TAGSARLPCPACGQ
Trigger: TTGCCCACAAGCGGGACACGGCAGTCTCGCTGAGCCAGCTGTGCAGAGGGACAGATGGAAGAAAGCTAGAGATGCTGCTTCGTGGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS CCA 90 bp GTCCCTCTGCACAGCTGGCTCAGCGAGACTGCCGTGTCCCGCTTGTaGGCAAGTGACGCGTCTGGGGAGAGTGATCCAGAAATGTCAACT +
Preference number: 5 (lower is better)
Translates to: VPLHSWLSETAVSRL*ASDASGESDPEMST
Trigger: AGTTGACATTTCTGGATCACTCTCCCCAGACGCGTCACTTGCCCACAAGCGGGACACGGCAGTCTCGCTGAGCCAGCTGTGCAGAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS CCA 90 bp CGAAGCAGCATCTCTAGCTTTCTTCCATCTGTCCCTCTGCACAGCTaGCTCAGCGAGACTGCCGTGTCCCGCTTGTGGGCAAGTGACGCG +
Preference number: 5 (lower is better)
Translates to: RSSISSFLPSVPLHS*LSETAVSRLWASDA
Trigger: CGCGTCACTTGCCCACAAGCGGGACACGGCAGTCTCGCTGAGCCAGCTGTGCAGAGGGACAGATGGAAGAAAGCTAGAGATGCTGCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS CCA 90 bp CCATGCACGAATCCTGCTGCCGAGTCAGTCCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAGCACCTGGGAACTGGATGGAAACAC +
Preference number: 5 (lower is better)
Translates to: PCTNPAAESVLLGPG*LQSIQKHLGTGWKH
Trigger: GTGTTTCCATCCAGTTCCCAGGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 90 bp GTCTCCGATTCCCATGCACGAATCCTGCTGCCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGAGCATCCAAAAGCACAGCTTCACGT +
Preference number: 5 (lower is better)
Translates to: VSDSHARILLPSQSS*APGGYRASKSTASR
Trigger: ACGTGAAGCTGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CAA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCCTTGGCCAACAGCTaGGGCTGTACTAGGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSSLANS*GCTRSS
Trigger: GGAACTCCTAGTACAGCCCAAGCTGTTGGCCAAGGA...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATCTGTTCTGCAAGGAGTaGCTTCCTCCGCCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNLFCKE*LPPPAS
Trigger: GGAAGCCGGCGGAGGAAGCAACTCCTTGCAGAACAG...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 90 bp TCCTGCAAGTTACTCTCTCTGTGTGCCGTGCTTAAGCATCCCACATaGAAAGAGCCATGTCGGGAGCCGTGGTGGCTCCCCTCTCCCGGG +
Preference number: 5 (lower is better)
Translates to: SCKLLSLCAVLKHPT*KEPCREPWWLPSPG
Trigger: CCCGGGAGAGGGGAGCCACCACGGCTCCCGACATGGCTCTTTTCATGTGGGATGCTTAAGCACGGCACACAGAGAGAGTAACTTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS CCA 90 bp TGGCCAGCTTCGAGGTCTTCAGCGTCCCCGTCTCGGTCAGGTCGATaGCGATCTCACTCAGGCTGCGTGCTGCATGGATTTTGGACTTAC +
Preference number: 5 (lower is better)
Translates to: WPASRSSASPSRSGR*RSHSGCVLHGFWTY
Trigger: GTAAGTCCAAAATCCATGCAGCACGCAGCCTGAGTGAGATCGCCATCGACCTGACCGAGACGGGGACGCTGAAGACCTCGAAGCTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS-3UTR CAA 90 bp TGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCGCAGCTGACGTGGCCTaGCACATCTGGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: CLVGLRMGGRLDTAESSFAADVA*HIWGIL
Trigger: CAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGC...GAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGACGAGGGTCCCGGGCTaGGCTTTTTCCTGCCCGTAC +
Preference number: 5 (lower is better)
Translates to: GSHQGAIEDWCLALYGQETRVPG*AFSCPY
Trigger: GTACGGGCAGGAAAAAGCCAAGCCCGGGACCCTCGT...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCGCCACCAAGGTGCCATaGAGGATTGGTGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAATKVP*RIGVWL
Trigger: GAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 90 bp GAGCGCTCAGGAGGGAGCGGTAGCCATCTGCGTGGAGTGCTGAACTaGGCTTCCTCCCCTCCAGTGCTGAAATGGGAAGGCGTTCAAATT +
Preference number: 5 (lower is better)
Translates to: ERSGGSGSHLRGVLN*ASSPPVLKWEGVQI
Trigger: AATTTGAACGCCTTCCCATTTCAGCACTGGAGGGGAGGAAGCTCAGTTCAGCACTCCACGCAGATGGCTACCGCTCCCTCCTGAGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS TCA 90 bp ATGCTCCAATTGTTCAGAAGACCCTGGGCGACTCAGCACCGGATATaGGCGCACATTCTGCCAGGAGGACGTTGTCAGGAGCCACGCGTG +
Preference number: 5 (lower is better)
Translates to: MLQLFRRPWATQHRI*AHILPGGRCQEPRV
Trigger: CACGCGTGGCTCCTGACAACGTCCTCCTGGCAGAATGTGCGCTCATATCCGGTGCTGAGTCGCCCAGGGTCTTCTGAACAATTGGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS GCA 90 bp GGGAAGGCGTTCAAATTCCCAGCCTCCCATCGGGACTCCACTTCCTaGTCACTAATGTGTAAGAGCCTTGCAAAGGGCGGAGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GKAFKFPASHRDSTS*SLMCKSLAKGGGGW
Trigger: CCAGCCTCCTCCGCCCTTTGCAAGGCTCTTACACATTAGTGAGCAGGAAGTGGAGTCCCGATGGGAGGCTGGGAATTTGAACGCCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS GCA 90 bp TCAGAAGACCCTGGGCGACTCAGCACCGGATATGAGCGCACATTCTaGCAGGAGGACGTTGTCAGGAGCCACGCGTGGCTCATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SEDPGRLSTGYERTF*QEDVVRSHAWLICF
Trigger: AAAACAGATGAGCCACGCGTGGCTCCTGACAACGTCCTCCTGGCAGAATGTGCGCTCATATCCGGTGCTGAGTCGCCCAGGGTCTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CCA 90 bp GGGAGTGAGACAGCCGAGTCTGACCATGAGGCACCAGGCAGTCACTaGAGATCAGCAAATGCCCTTACCATCCCCGAGGAGGAAGTCACT +
Preference number: 5 (lower is better)
Translates to: GSETAESDHEAPGSH*RSANALTIPEEEVT
Trigger: AGTGACTTCCTCCTCGGGGATGGTAAGGGCATTTGCTGATCTCCAGTGACTGCCTGGTGCCTCATGGTCAGACTCGGCTGTCTCACTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCCCTCTTCATGAAGTGCTaGGTTGGCCTACGTATGGGT +
Preference number: 5 (lower is better)
Translates to: GQERQGTHSGTGTFQNVSLFMKC*VGLRMG
Trigger: ACCCATACGTAGGCCAACCAAGCACTTCATGAAGAG...GGAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp GCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCATCAAGAAGATGTACTaGACATCGGCGGCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: ATKVPLRIGVWLSMGKSAIKKMY*TSAALR
Trigger: ACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGAT...GGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAAGCCCAAACGTCCTCCTaGTCACTGAAGCCCTGCGTG +
Preference number: 5 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAEAQTSS*SLKPCV
Trigger: CACGCAGGGCTTCAGTGACAAGGAGGACGTTTGGGC...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACACTGATGATCTTCCCCTaGCTACCCATGTTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PLRIGVWLSMGKSARGHTLMIFP*LPMLAS
Trigger: GCTGGCCAACATGGGTAGCAAGGGGAAGATCATCAG...TGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGGCCAGCATGTCCTTCTaGGCCGACTGCGAGCTATCT +
Preference number: 5 (lower is better)
Translates to: GSHQGAIEDWCLALYGQEASMSF*ADCELS
Trigger: AGATAGCTCGCAGTCGGCCAAGAAGGACATGCTGGC...CTCTTGCCCATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp AAAAGTGCTGAGGGCCAAAGCTGGTGCAGGGTGACGGTGCGTCTGGGTAAGGCATATTCTACTGGCAGCTaGCCCGTGAGCTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: KSAEGQSWCRVTVRLGKAYSTGS*PVSSAS
Trigger: AGAAGCTGAGCTCACGGGCAAGCTGCCAGTAGAATA...TGCCTTACCCAGACGCACCGTCACCCTGCACCAGCTTTGGCCCTCAGCACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp TGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATGTCTCTGGCTCCAATTTCACTaGACGGTGTCGAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: WARAPGDTQWDRNLPECLWLQFH*TVSSFS
Trigger: AGAGAAGCTCGACACCGTCAAGTGAAATTGGAGCCA...GAGACATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCTGGGTGAGTTTTCTGTaGCTTCTCCAGTCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTWVSFL*LLQSAR
Trigger: CCTGGCAGACTGGAGAAGCAACAGAAAACTCACCCA...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 90 bp CAGGAGAATCGCTTGAACCCGGGAAGCAGAGATTGGAGATTGCAGTaGTCCAAGATGGCACCATTGCCCTCCAGCCTGCACGACACAGTG +
Preference number: 5 (lower is better)
Translates to: QENRLNPGSRDWRLQ*SKMAPLPSSLHDTV
Trigger: CACTGTGTCGTGCAGGCTGGAGGGCAATGGTGCCATCTTGGATCACTGCAATCTCCAATCTCTGCTTCCCGGGTTCAAGCGATTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS CCA 90 bp ACAGAACTTAGGGAAGACCTCAGACCCAGAAGCACCACCGAGTGTTaGGATCCCCTCCAGGGTGAGAAAGCTAAGAGCAGAGAGCTGCAG +
Preference number: 5 (lower is better)
Translates to: TELREDLRPRSTTEC*DPLQGEKAKSRELQ
Trigger: CTGCAGCTCTCTGCTCTTAGCTTTCTCACCCTGGAGGGGATCCCAACACTCGGTGGTGCTTCTGGGTCTGAGGTCTTCCCTAAGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS CCA 90 bp CACCATGGTTTTAGCAGCAGCTGCAGAACTCGAATGTTCCTCACTTaGCAGGTCCTCAGCGCCCGACAAGTCAGGTTCCAACTCCACGGT +
Preference number: 5 (lower is better)
Translates to: HHGFSSSCRTRMFLT*QVLSARQVRFQLHG
Trigger: ACCGTGGAGTTGGAACCTGACTTGTCGGGCGCTGAGGACCTGCCAAGTGAGGAACATTCGAGTTCTGCAGCTGCTGCTAAAACCATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS CCA 90 bp TGTCTTCACAGTAGGCCAGGGAAGGGTGCTCCTTCAGGGCTTGGGTaGGAAGGGCTGGCAGCTTCTTCAAGTCACTCCTCACAACTTCAT +
Preference number: 5 (lower is better)
Translates to: CLHSRPGKGAPSGLG*EGLAASSSHSSQLH
Trigger: ATGAAGTTGTGAGGAGTGACTTGAAGAAGCTGCCAGCCCTTCCCACCCAAGCCCTGAAGGAGCACCCTTCCCTGGCCTACTGTGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
CDS CCA 90 bp CCAGAGCTTCCTGCCTGGACTTCAAGGCAGCCAGCATGTCCTTCTTaGCCGACTGCGAGCTATCTGATTCCTGAGAACCTGAAGACAGCA +
Preference number: 5 (lower is better)
Translates to: PELPAWTSRQPACPS*PTASYLIPENLKTA
Trigger: TGCTGTCTTCAGGTTCTCAGGAATCAGATAGCTCGCAGTCGGCCAAGAAGGACATGCTGGCTGCCTTGAAGTCCAGGCAGGAAGCTCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 90 bp GAAGGCTGTTCCTATTCTTCTCCGAACAATGGGTGGTTCCTCCCCTaGATCCAGGGGATATTCTACTGGCAGCTTGCCCGTGAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: EGCSYSSPNNGWFLP*IQGIFYWQLARELS
Trigger: GCTGAGCTCACGGGCAAGCTGCCAGTAGAATATCCCCTGGATCCAGGGGAGGAACCACCCATTGTTCGGAGAAGAATAGGAACAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 90 bp GGCCCTCCGTCATCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATaGTGGCAGAATCCTCATGCCAGTTTCTGTCTCCTGCAAGTTACT +
Preference number: 5 (lower is better)
Translates to: GPPSSSSSSETGALP*WQNPHASFCLLQVT
Trigger: AGTAACTTGCAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGATGACGGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649423.1
CDS-3UTR CAA 90 bp CCCGTTCTCTCCCAACGCTACTTATCCGCAGGAATTGGATGCCGGCTGGCCCCCGTAGTTTACGATTGCTaGACCTCTTGTCTGACCGTT +
Preference number: 5 (lower is better)
Translates to: PVLSQRYLSAGIGCRLAPVVYDC*TSCLTV
Trigger: AACGGTCAGACAAGAGGTCAAGCAATCGTAAACTAC...GGGGGCCAGCCGGCATCCAATTCCTGCGGATAAGTAGCGTTGGGAGAGAACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAACCCTTGCTACCCATGTaGGCCAGCTTCGAGGTCTTC +
Preference number: 5 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAEPLLPM*ASFEVF
Trigger: GAAGACCTCGAAGCTGGCCAACATGGGTAGCAAGGG...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 90 bp GGCTGTACTAGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATCCTTTCAACGCTGCGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: GCTRSSSFLSSRRCT*HRRPSVILSTLRLL
Trigger: GAGAAGGCGCAGCGTTGAAAGGATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCTAGTACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS TCA 90 bp AGGACCTTGGAACTCCTCTGTCCCTCCCAACATCAAAAGACAAAATaGCTTGGCCAAGGCTGGCGGAAGCGGACGACGGAACCAGATCTC +
Preference number: 5 (lower is better)
Translates to: RTLELLCPSQHQKTK*LGQGWRKRTTEPDL
Trigger: GAGATCTGGTTCCGTCGTCCGCTTCCGCCAGCCTTGGCCAAGTCATTTTGTCTTTTGATGTTGGGAGGGACAGAGGAGTTCCAAGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS GCA 90 bp TGGAAGGACAGCCTCTTTCAGCCTCATTCAGCCGCGAGCCAGAAATaGTCCAATTGTTCAGAAGACCCTGGGCGACTCAGCACCGGATAT +
Preference number: 5 (lower is better)
Translates to: WKDSLFQPHSAASQK*SNCSEDPGRLSTGY
Trigger: ATATCCGGTGCTGAGTCGCCCAGGGTCTTCTGAACAATTGGAGCATTTCTGGCTCGCGGCTGAATGAGGCTGAAAGAGGCTGTCCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CCA 90 bp TCCTGCTCACTAATGTGTAAGAGCCTTGCAAAGGGCGGAGGAGGCTaGGACCTTATTTCGGGGGCAGGCAACTCAAGATCACAGTGTGAG +
Preference number: 5 (lower is better)
Translates to: SCSLMCKSLAKGGGG*DLISGAGNSRSQCE
Trigger: CTCACACTGTGATCTTGAGTTGCCTGCCCCCGAAATAAGGTCCCAGCCTCCTCCGCCCTTTGCAAGGCTCTTACACATTAGTGAGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CCA 90 bp CCTCCGTCATCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATGGTaGCAGAATCCTCATGCCAGTTTCTGTCTCCTGCAAGTTACTCTC +
Preference number: 5 (lower is better)
Translates to: PPSSSSSSETGALPW*QNPHASFCLLQVTL
Trigger: GAGAGTAACTTGCAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGATGACGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649423.1
CDS-3UTR CAA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCCAGATAGAACTGGTGTaGGCTTATGGCCATAGCCCA +
Preference number: 5 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSQIELV*AYGHSP
Trigger: TGGGCTATGGCCATAAGCCAACACCAGTTCTATCTG...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGGACCGGAACCTTCCAGAATTCAGCTTCCTCTCCTTaGGGCAGGATTTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LYGQERQGTHSGTGTFQNSASSP*GRIFCS
Trigger: TGAACAGAAAATCCTGCCCAAAGGAGAGGAAGCTGA...ATTCTGGAAGGTTCCGGTCCCACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTTGGTCAGTGTCTTCTTaGCTGCAGATAGGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: RQPRLPRLYRGIGAVFQAWSVSS*LQIGVS
Trigger: GGACACACCTATCTGCAGCAAAGAAGACACTGACCA...AGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCCTCTTCATGAAGTGCTaGGTTGGCCTACGTATGGGT +
Preference number: 5 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSLFMKC*VGLRMG
Trigger: ACCCATACGTAGGCCAACCAAGCACTTCATGAAGAG...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp ATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATACCCTGCTCTGCCTGTaGGCTAGTAGACACACGAGT +
Preference number: 5 (lower is better)
Translates to: MAEGSHQGAIEDWCLALYTLLCL*ASRHTS
Trigger: ACTCGTGTGTCTACTAGCCAACAGGCAGAGCAGGGT...ATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GGCCCTGAATTGTCTAGAGAGACTTGGTGGAGGAGGCCACGGCCCGCCTTGTCCGCACCTGGATGGGGTTaGCTATATTTAGAACTAAAC +
Preference number: 5 (lower is better)
Translates to: GPELSRETWWRRPRPALSAPGWG*LYLELN
Trigger: GTTTAGTTCTAAATATAGCAAACCCCATCCAGGTGC...GGACAAGGCGGGCCGTGGCCTCCTCCACCAAGTCTCTCTAGACAATTCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp ATAGCCCAGATGGACTTGATCAATGCCGGACATGCATACCACGTGTaGACTGCAATGCCGCTGTGCCCAAACGTCCTCCTTGTCACTGAA +
Preference number: 5 (lower is better)
Translates to: IAQMDLINAGHAYHV*TAMPLCPNVLLVTE
Trigger: TTCAGTGACAAGGAGGACGTTTGGGCACAGCGGCATTGCAGTGCACACGTGGTATGCATGTCCGGCATTGATCAAGTCCATCTGGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CCA 90 bp TGGCCAGCTCAGCTCCCGGTAGGGCTAACATACTTAAGAGGAACATaGAATTGCACTGCCTGTTCTGTGAGCGTTCTGATCTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: WPAQLPVGLTYLRGT*NCTACSVSVLISLA
Trigger: AGCCAGGGAGATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCTACCGGGAGCTGAGCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp CTTGGAACTCCTCTGTCCCTCCCAACATCAAAAGACAAAATGACTTaGCCAAGGCTGGCGGAAGCGGACGACGGAACCAGATCTCTGACT +
Preference number: 5 (lower is better)
Translates to: LGTPLSLPTSKDKMT*PRLAEADDGTRSLT
Trigger: AGTCAGAGATCTGGTTCCGTCGTCCGCTTCCGCCAGCCTTGGCCAAGTCATTTTGTCTTTTGATGTTGGGAGGGACAGAGGAGTTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS-3UTR CAA 90 bp CGCCAGCCAAGACTTCCTCGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTAAGAGGAACATGGAATaGCACTGCCTGTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: RQPRLPRLYRGIGAVFQAKRNME*HCLFCE
Trigger: CTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTT...AGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCGAGGAAGTCTTGGCTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GAAGAATCCAATAGGGGCTTTATATCAGACCAAGGACTTCGTATTTCACCTTATTGCCTCTGGCGCGCCTaGGACGGCGAGTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: EESNRGFISDQGLRISPYCLWRA*DGESSA
Trigger: GGCCGAGGACTCGCCGTCCAAGGCGCGCCAGAGGCA...ATAAGGTGAAATACGAAGTCCTTGGTCTGATATAAAGCCCCTATTGGATTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp TCATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTTGGCTCCAATTTCACTaGACGGTGTCGAGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SWQREATKVPLRIGVWLSWLQFH*TVSSFS
Trigger: AGAGAAGCTCGACACCGTCAAGTGAAATTGGAGCCA...AGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCCTATTCATCAGTACTTaGGTGAGGTGGAGACTCAGA +
Preference number: 5 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTLFIST*VRWRLR
Trigger: TCTGAGTCTCCACCTCACCAAAGTACTGATGAATAG...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp ATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTTTTGCCTCTCATTCCTaGCAACTCCAGTGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: IEDWCLALYGQERQGTHSFASHS*QLQWAR
Trigger: TCTAGCCCACTGGAGTTGCAAGGAATGAGAGGCAAA...ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 90 bp TGCCAGGAGGACGTTGTCAGGAGCCACGCGTGGCTCATCTGTTTTTaGCACAGAGGGGATATTGATGACCAGCCACTGATTTCAGAAGAC +
Preference number: 5 (lower is better)
Translates to: CQEDVVRSHAWLICF*HRGDIDDQPLISED
Trigger: GTCTTCTGAAATCAGTGGCTGGTCATCAATATCCCCTCTGTGTCAAAAACAGATGAGCCACGCGTGGCTCCTGACAACGTCCTCCTGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS GCA 90 bp GCTCAGCTCCCGGTAGGGCTAACATACTTAAGAGGAACATGGAATTaGACTGCCTGTTCTGTGAGCGTTCTGATCTCCCTGGCTGTACCA +
Preference number: 5 (lower is better)
Translates to: AQLPVGLTYLRGTWN*TACSVSVLISLAVP
Trigger: TGGTACAGCCAGGGAGATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCTACCGGGAGCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp CAATCCATGTGGCCACACGTTCCCATGATCCGTGGGGCCAGATCATaGTATTCCCAGTTCACATTCCATCCCGTCAGGGTACTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: QSMWPHVPMIRGARS*YSQFTFHPVRVLSK
Trigger: TTTTGAGAGTACCCTGACGGGATGGAATGTGAACTGGGAATAGCATGATCTGGCCCCACGGATCATGGGAACGTGTGGCCACATGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS GCA 90 bp AAGTCTTCCAGCTTGGCAGCCAAAGTCATGATGAATGTCCCGATTTaGTCTCAGTCCCCGCTGACAGATCAGATCTGCAAACTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: KSSSLAAKVMMNVPI*SQSPLTDQICKLPS
Trigger: GCTGGGGAGTTTGCAGATCTGATCTGTCAGCGGGGACTGAGAGCAAATCGGGACATTCATCATGACTTTGGCTGCCAAGCTGGAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649947.1
CDS CCA 90 bp CTGGATGGAAACACAGATTCTGGGGCCCATCCCAAAGGGTTAATATaGCGGCACTCAGCTGCTATCCAGGACTTTTTCCTGTTCGTGGAG +
Preference number: 5 (lower is better)
Translates to: LDGNTDSGAHPKGLI*RHSAAIQDFFLFVE
Trigger: CTCCACGAACAGGAAAAAGTCCTGGATAGCAGCTGAGTGCCGCCATATTAACCCTTTGGGATGGGCCCCAGAATCTGTGTTTCCATCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 90 bp CAGAGCATCCAAAAGCACCTGGGAACTGGATGGAAACACAGATTCTaGGGCCCATCCCAAAGGGTTAATATGGCGGCACTCAGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: QSIQKHLGTGWKHRF*GPSQRVNMAALSCY
Trigger: ATAGCAGCTGAGTGCCGCCATATTAACCCTTTGGGATGGGCCCCAGAATCTGTGTTTCCATCCAGTTCCCAGGTGCTTTTGGATGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 90 bp AGTAGAAACCCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATGGTaGCAGAATCCTCATGCCAGTTTCTGTCTCCTGCAAGTTACTCTC +
Preference number: 5 (lower is better)
Translates to: SRNPSSSSETGALPW*QNPHASFCLLQVTL
Trigger: GAGAGTAACTTGCAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGGGTTTCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648761.1
CDS CCA 90 bp GGAAGTAGAAACCCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATaGTGGCAGAATCCTCATGCCAGTTTCTGTCTCCTGCAAGTTACT +
Preference number: 5 (lower is better)
Translates to: GSRNPSSSSETGALP*WQNPHASFCLLQVT
Trigger: AGTAACTTGCAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGGGTTTCTACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648761.1
CDS-3UTR CAA 90 bp ATGGCAGAGGGAAGCCACCAAGGTGCCATTGAGGATTGGTGTCTGGCTCTCTATATAGCCCAGATGGACTaGATCAATGCCGGACATGCA +
Preference number: 5 (lower is better)
Translates to: MAEGSHQGAIEDWCLALYIAQMD*INAGHA
Trigger: TGCATGTCCGGCATTGATCAAGTCCATCTGGGCTAT...ATAGAGAGCCAGACACCAATCCTCAATGGCACCTTGGTGGCTTCCCTCTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGTTTCTTCAGTTTTTaGCTGACGTTGGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSCFFSF*LTLGSL
Trigger: CAGTGACCCCAACGTCAGCAAAAAACTGAAGAAACA...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp TTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCGGAGACAGGGACTCACTCCACATTTaGGGCTTGATGGGTGACTTG +
Preference number: 5 (lower is better)
Translates to: FQNVSSVRFSRGRECGDRDSLHI*GLMGDL
Trigger: CAAGTCACCCATCAAGCCCAAAATGTGGAGTGAGTC...CCTGTCTCCGCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTGCAGCTGACGTGGCCTaGCACATCTGGGGCATCCTG +
Preference number: 5 (lower is better)
Translates to: SELFCHTSANEQKMSHDSAADVA*HIWGIL
Trigger: CAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTGC...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GGAGGGAGGGTGGAGTGTGATGGGCTCTTACTGTCTCCATTCGGTTTTGTCTTAGCTCTGGTCACTGAGTaGGTGAGGGATGGATTCAGA +
Preference number: 5 (lower is better)
Translates to: GGRVECDGLLLSPFGFVLALVTE*VRDGFR
Trigger: TCTGAATCCATCCCTCACCAACTCAGTGACCAGAGC...TAAGACAAAACCGAATGGAGACAGTAAGAGCCCATCACACTCCACCCTCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS TCA 90 bp GGAAGCGCTTGTGGCTGCTGGAATGGCTGTGAGAGGAGCGCTTCTTaGCCTTCTCATAGGGTTCATCTAAAGAGGACTCACTCCACATTT +
Preference number: 5 (lower is better)
Translates to: GSACGCWNGCERSAS*PSHRVHLKRTHSTF
Trigger: AAATGTGGAGTGAGTCCTCTTTAGATGAACCCTATGAGAAGGTCAAGAAGCGCTCCTCTCACAGCCATTCCAGCAGCCACAAGCGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 90 bp GCGGACGACGGAACCAGATCTCTGACTCGCAATTTCAAAAGGCACTaGATGGAGAAATCATGCCCTGCGACACGATGGAGAGAGTATTCC +
Preference number: 5 (lower is better)
Translates to: ADDGTRSLTRNFKRH*MEKSCPATRWREYS
Trigger: GGAATACTCTCTCCATCGTGTCGCAGGGCATGATTTCTCCATTCAGTGCCTTTTGAAATTGCGAGTCAGAGATCTGGTTCCGTCGTCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS GCA 90 bp GCTCCCGGTAGGGCTAACATACTTAAGAGGAACATGGAATTGCACTaGCTGTTCTGTGAGCGTTCTGATCTCCCTGGCTGTACCACATGT +
Preference number: 5 (lower is better)
Translates to: APGRANILKRNMELH*LFCERSDLPGCTTC
Trigger: ACATGTGGTACAGCCAGGGAGATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCTACCGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp AGATTCTGGGGCCCATCCCAAAGGGTTAATATGGCGGCACTCAGCTaGTATCCAGGACTTTTTCCTGTTCGTGGAGTCTTGGAAGAACAC +
Preference number: 5 (lower is better)
Translates to: RFWGPSQRVNMAALS*YPGLFPVRGVLEEH
Trigger: GTGTTCTTCCAAGACTCCACGAACAGGAAAAAGTCCTGGATAGCAGCTGAGTGCCGCCATATTAACCCTTTGGGATGGGCCCCAGAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS GCA 90 bp GAAGCCTCCTCACGGGTTGGTGAACACAGCAGTATCTTCTTTCGCTaGCTGAGATTCTTGCAAAGATGGGAGAGGCAGCTTTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: EASSRVGEHSSIFFR*LRFLQRWERQLFNS
Trigger: GCTGTTGAAAAGCTGCCTCTCCCATCTTTGCAAGAATCTCAGGCAGCGAAAGAAGATACTGCTGTGTTCACCAACCCGTGAGGAGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS GCA 90 bp ATGAATGTCCCGATTTGCTCTCAGTCCCCGCTGACAGATCAGATCTaGAAACTCCCCAGCTCAGGAAACACCGTCGGCGTCAAATTTGAT +
Preference number: 5 (lower is better)
Translates to: MNVPICSQSPLTDQI*KLPSSGNTVGVKFD
Trigger: ATCAAATTTGACGCCGACGGTGTTTCCTGAGCTGGGGAGTTTGCAGATCTGATCTGTCAGCGGGGACTGAGAGCAAATCGGGACATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648761.1
CDS CCA 90 bp GATAACGGCACATCCCTGTTTCTCAGTGGACTGAGGCTGGCTCTTTaGCAGATCAAACAGAACTTAGGGAAGACCTCAGACCCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: DNGTSLFLSGLRLAL*QIKQNLGKTSDPEA
Trigger: TGCTTCTGGGTCTGAGGTCTTCCCTAAGTTCTGTTTGATCTGCCAAAGAGCCAGCCTCAGTCCACTGAGAAACAGGGATGTGCCGTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS CCA 90 bp AAAGTCTTTGGGATCTATTCGGAGCCACTGCAGCCTGAACCACCATaGTGTACAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: KVFGIYSEPLQPEPP*CTAVCVCVCVCVCV
Trigger: CACACACACACACACACACACACACACACACACAGCTGTACACCATGGTGGTTCAGGCTGCAGTGGCTCCGAATAGATCCCAAAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS-3UTR CAA 90 bp ACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGGAATGCCGATTGCTTGACCTCTaGTCTGACCGTTCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TGTFQNVSSVRFSRGRECRLLDL*SDRSVS
Trigger: AGAAACTGAACGGTCAGACAAGAGGTCAAGCAATCG...GCATTCCCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp ATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTGGTTTCTTCCCAGACTaGATGCGGTTCTCATTGATT +
Preference number: 5 (lower is better)
Translates to: IEDWCLALYGQERQGTHSGFFPD*MRFSLI
Trigger: AATCAATGAGAACCGCATCAAGTCTGGGAAGAAACC...ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GGTCAGTCTGTATTCACACCTAAGGGCAAGCTAAGTTGTGAATTTGACAGAGGATCCAAGATGGCACCATaGCCCTCCAGCCTGCACGAC +
Preference number: 5 (lower is better)
Translates to: GQSVFTPKGKLSCEFDRGSKMAP*PSSLHD
Trigger: GTCGTGCAGGCTGGAGGGCAATGGTGCCATCTTGGA...TCCTCTGTCAAATTCACAACTTAGCTTGCCCTTAGGTGTGAATACAGACTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS TCA 90 bp GCTCAGCTTCCTCTCCTTTGGGCAGGATTTTCTGTTCATCCAGTTTaGAGGCTGTTCCTATTCTTCTCCGAACAATGGGTGGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: AQLPLLWAGFSVHPV*RLFLFFSEQWVVPP
Trigger: GGGAGGAACCACCCATTGTTCGGAGAAGAATAGGAACAGCCTTCAAACTGGATGAACAGAAAATCCTGCCCAAAGGAGAGGAAGCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS GCA 90 bp TTCGACAGCTGGCAGTTTCCTTATCAAAACAGAGACCGTAGTCTGTaGCTCCTCCGCCTCTTGCTTGACACACACACACACATACACACA +
Preference number: 5 (lower is better)
Translates to: FDSWQFPYQNRDRSL*LLRLLLDTHTHIHT
Trigger: TGTGTGTATGTGTGTGTGTGTGTCAAGCAAGAGGCGGAGGAGGCACAGACTACGGTCTCTGTTTTGATAAGGAAACTGCCAGCTGTCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CCA 90 bp TGCAGTGTCTCCTGGCACCAGATCCTGAAATTCACAACACACAAGTaGGCACATGAGCGGATTCCACTTTTCACCCTTGGACCTGACATT +
Preference number: 5 (lower is better)
Translates to: CSVSWHQILKFTTHK*AHERIPLFTLGPDI
Trigger: AATGTCAGGTCCAAGGGTGAAAAGTGGAATCCGCTCATGTGCCCACTTGTGTGTTGTGAATTTCAGGATCTGGTGCCAGGAGACACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS-3UTR CAA 90 bp TCTGAGCTCTTTTGTCACACAAGTGCTAACGAACAGAAAATGAGCCACGACAGTAGTGAACCCCGTAGGTaGGGAGAGACTCCACGATGC +
Preference number: 5 (lower is better)
Translates to: SELFCHTSANEQKMSHDSSEPRR*GETPRC
Trigger: GCATCGTGGAGTCTCTCCCAACCTACGGGGTTCACT...ACTGTCGTGGCTCATTTTCTGTTCGTTAGCACTTGTGTGACAAAAGAGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CCTCTTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCGCTTTCCAGTTGTGTTaGAAGCATAGCTCAAAACAT +
Preference number: 5 (lower is better)
Translates to: PLHEVLGWPTYGWQAGHSAFQLC*KHSSKH
Trigger: ATGTTTTGAGCTATGCTTCAAACACAACTGGAAAGC...GCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCACCAGCCTATGGTTATTCTaGGATTCCACATACATGAAA +
Preference number: 5 (lower is better)
Translates to: GLRMGGRLDTAESSFWVTSLWLF*DSTYMK
Trigger: TTTCATGTATGTGGAATCCAAGAATAACCATAGGCT...GGTGACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp TTCATGAAGTGCTTGGTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAAGCTACCTTTTCCCTTTaGACTTTTCCTGTTGCACAC +
Preference number: 5 (lower is better)
Translates to: FMKCLVGLRMGGRLDTAEATFSL*TFPVAH
Trigger: GTGTGCAACAGGAAAAGTCAAAAGGGAAAAGGTAGC...TTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAACCAAGCACTTCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GTCCACCGATGGATGAGGAGATGCTTCCGGCAGATTGCTCTCTTAGCCACAATTGCACCTCAGGTAATTTaGGTGCAAGTGGATCACACT +
Preference number: 5 (lower is better)
Translates to: VHRWMRRCFRQIALLATIAPQVI*VQVDHT
Trigger: AGTGTGATCCACTTGCACCAAAATTACCTGAGGTGC...AATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS CCA 90 bp TATGCCCTGCTTGTCCTTCACTGCATAATAGTGAACCCCGTAGGTTaGGAGAGACTCCACGATGCTCATGTAGTTTACGATTGCTTGACC +
Preference number: 5 (lower is better)
Translates to: YALLVLHCIIVNPVG*ERLHDAHVVYDCLT
Trigger: GGTCAAGCAATCGTAAACTACATGAGCATCGTGGAGTCTCTCCCAACCTACGGGGTTCACTATTATGCAGTGAAGGACAAGCAGGGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
CDS CCA 90 bp TCTTCACTGGCAATGTTTCCATCGTCTATGATCAGCGAAGCCCTCTaGGTGGGTTTCTTCCCAGACTTGATGCGGTTCTCATTGATTGCA +
Preference number: 5 (lower is better)
Translates to: SSLAMFPSSMISEAL*VGFFPDLMRFSLIA
Trigger: TGCAATCAATGAGAACCGCATCAAGTCTGGGAAGAAACCCACCCAGAGGGCTTCGCTGATCATAGACGATGGAAACATTGCCAGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp GAACACAGCAGTATCTTCTTTCGCTGCCTGAGATTCTTGCAAAGATaGGAGAGGCAGCTTTTCAACAGCCTAAAAGGCCATCTCCACCAC +
Preference number: 5 (lower is better)
Translates to: EHSSIFFRCLRFLQR*ERQLFNSLKGHLHH
Trigger: GTGGTGGAGATGGCCTTTTAGGCTGTTGAAAAGCTGCCTCTCCCATCTTTGCAAGAATCTCAGGCAGCGAAAGAAGATACTGCTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CAA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATTACAGCGGGTACTCCTaGATGCGGTACTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNYSGYS*MRYCEL
Trigger: CAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGTA...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp ATCAAGGAATATTTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGTACAGCGGGTACTCCTaGATGCGGTACTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: IKEYFRCKLNMPRGLLFMYSGYS*MRYCEL
Trigger: CAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGTA...CATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAAATATTCCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS-3UTR CAA 90 bp TTGTGGTCCTCCGATGCATTTCTGGTGTCGAGAACTTCCTTTCTCAACCTCCCCAGGGTTGACTTTCACTaGTGTGTAGTAGCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: LWSSDAFLVSRTSFLNLPRVDFH*CVVAVQ
Trigger: CTGAACTGCTACTACACACAAGTGAAAGTCAACCCT...GGGGAGGTTGAGAAAGGAAGTTCTCGACACCAGAAATGCATCGGAGGACCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp ACAGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGATTGATGGCTTTCCAGTaGTGTTTGAAGCATAGCTCA +
Preference number: 5 (lower is better)
Translates to: TVGPEPSRMSPQSGFQGGLMAFQ*CLKHSS
Trigger: TGAGCTATGCTTCAAACACAACTGGAAAGCCATCAA...TCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp ATTGAGGATTGGTGTCTGGCTCTCTATGGGCAAGAGCGCCAGGGGACACACAGTCCTTTTTGTGCCATCTaGAATAACCCAACTAAAGTC +
Preference number: 5 (lower is better)
Translates to: IEDWCLALYGQERQGTHSPFCAI*NNPTKV
Trigger: GACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGG...ACTGTGTGTCCCCTGGCGCTCTTGCCCATAGAGAGCCAGACACCAATCCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GTTGGCCTACGTATGGGTGGCAGGCTGGACACAGCTGAATCGTCTTTCTGGGTCATAGGGATAAAGAGTTaGCAAGTGCTTGTGTACAAT +
Preference number: 5 (lower is better)
Translates to: VGLRMGGRLDTAESSFWVIGIKS*QVLVYN
Trigger: ATTGTACACAAGCACTTGCAAACTCTTTATCCCTAT...GACCCAGAAAGACGATTCAGCTGTGTCCAGCCTGCCACCCATACGTAGGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CCGAAATGGCATCATAACACCCTTGAAGCCCCTTGGTTATTCATCCTTATCCTGCCTGTTCGTGGAGTCTaGGAAGAACACTCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: PKWHHNTLEAPWLFILILPVRGV*EEHSSR
Trigger: CCTAGAGGAGTGTTCTTCCAAGACTCCACGAACAGG...CAGGATAAGGATGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCCATTTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CAA 90 bp GTCCACCGATGGATGAGGAGATGCTTCCGGCAGATTGCTCTCTTAGCCACAATTGAATCTGTAAGATCCTaGTCACAAGCACCTCAGGTA +
Preference number: 5 (lower is better)
Translates to: VHRWMRRCFRQIALLATIESVRS*SQAPQV
Trigger: TACCTGAGGTGCTTGTGACAAGGATCTTACAGATTC...AATTGTGGCTAAGAGAGCAATCTGCCGGAAGCATCTCCTCATCCATCGGTGGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CAA 90 bp TCTTCCCAGACAGCTGCGCTTACAAACAAACTGCTAGGTAGCAGTAGCACTTTGGGTAGCAGTAGCACTTaGACAAATGGAGCACAACCC +
Preference number: 5 (lower is better)
Translates to: SSQTAALTNKLLGSSSTLGSSST*TNGAQP
Trigger: GGGTTGTGCTCCATTTGTCAAAGTGCTACTGCTACC...CAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAGCGCAGCTGTCTGGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS TCA 90 bp TGTGCTGGTAACCTGAGAGTCTTCATCCTCAAGAACAAGGGCATCTaGGAGGGAGCTGTCTTCACTGGCAATGTTTCCATCGTCTATGAT +
Preference number: 5 (lower is better)
Translates to: CAGNLRVFILKNKGI*EGAVFTGNVSIVYD
Trigger: ATCATAGACGATGGAAACATTGCCAGTGAAGACAGCTCCCTCTCAGATGCCCTTGTTCTTGAGGATGAAGACTCTCAGGTTACCAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 90 bp ATTCATCAGTACTTTGGTGAGGTGGAGACTCAGACCCATCCAGAATaGGTGAGTTTTCTGTTGCTTCTCCAGTCTGCCAGGTTAGGATGT +
Preference number: 5 (lower is better)
Translates to: IHQYFGEVETQTHPE*VSFLLLLQSARLGC
Trigger: ACATCCTAACCTGGCAGACTGGAGAAGCAACAGAAAACTCACCCATTCTGGATGGGTCTGAGTCTCCACCTCACCAAAGTACTGATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATATCAGACCAAGGCCACCAAGGTGCCATaGAGGATTGGTGTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: AISFTHPKNPIGALYQTKATKVP*RIGVWL
Trigger: GAGCCAGACACCAATCCTCAATGGCACCTTGGTGGC...CTTGGTCTGATATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp ATAGCCATCCCCACAAGCTGTCCCATCAAGGAATATTTCAGGTGTAAACTGAATGCCTTTACCGTGGCATaGGGGCAGTTTTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: IAIPTSCPIKEYFRCKLNAFTVA*GQFFRL
Trigger: GAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGC...ATTCAGTTTACACCTGAAATATTCCTTGATGGGACAGCTTGTGGGGATGGCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CGCCTTTACCGTGGCATTGGGGCAGTTTTTCAGGCTCTCTACGGAGAGAGAAGTTTCTTTCCTCCTCTTTaGGTATCTGCACACAAATGT +
Preference number: 5 (lower is better)
Translates to: RLYRGIGAVFQALYGERSFFPPL*VSAHKC
Trigger: ACATTTGTGTGCAGATACCAAAAGAGGAGGAAAGAA...ACTTCTCTCTCCGTAGAGAGCCTGAAAAACTGCCCCAATGCCACGGTAAAGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp AGTGGGACCGGAACCTTCCAGAATGTCTCCTCAGTCAGGTTTTCAAGGGGGAGGAGAGTTTGCAAGTGCTaGTGTACAATAACTACATCA +
Preference number: 5 (lower is better)
Translates to: SGTGTFQNVSSVRFSRGRRVCKC*CTITTS
Trigger: TGATGTAGTTATTGTACACAAGCACTTGCAAACTCT...CCTCCCCCTTGAAAACCTGACTGAGGAGACATTCTGGAAGGTTCCGGTCCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp AAAGATAAACTAATCCTCGGCTCTAGCATGTTCCAGCCCTTGCAGCTTTCCCTGGGCATCATAACACCCTaGAAGCCCCTTGGTTATTCA +
Preference number: 5 (lower is better)
Translates to: KDKLILGSSMFQPLQLSLGIITP*KPLGYS
Trigger: TGAATAACCAAGGGGCTTCAAGGGTGTTATGATGCC...CAGGGAAAGCTGCAAGGGCTGGAACATGCTAGAGCCGAGGATTAGTTTATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CAA 90 bp TCCGTGGAGACTGAATCTGTAAGATCCTTGTCACAAGCACCTCAGGTAATTTTGCCCGGGAAGCAGAGATaGGAGATTGCAGTGATCCAA +
Preference number: 5 (lower is better)
Translates to: SVETESVRSLSQAPQVILPGKQR*EIAVIQ
Trigger: TTGGATCACTGCAATCTCCAATCTCTGCTTCCCGGG...CAAAATTACCTGAGGTGCTTGTGACAAGGATCTTACAGATTCAGTCTCCACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CAA 90 bp GGAGGGAGGGTGGAGTGTGATGGGCTCTTACTGTCTCCATTCGGTTTTGTCTTAAATTTGACAGAGGACTaGGACAGTGTCTCTAGTTGT +
Preference number: 5 (lower is better)
Translates to: GGRVECDGLLLSPFGFVLNLTED*DSVSSC
Trigger: ACAACTAGAGACACTGTCCAAGTCCTCTGTCAAATT...TAAGACAAAACCGAATGGAGACAGTAAGAGCCCATCACACTCCACCCTCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS-3UTR CAA 90 bp CTAGTTGTCCCGGTTATAGCTGTGGTTAGTGTCCACCGATGGATGAGGAGATGCGCTAAATGCATTAACTaGTTGCACATCACGCAGATC +
Preference number: 5 (lower is better)
Translates to: LVVPVIAVVSVHRWMRRCAKCIN*LHITQI
Trigger: GATCTGCGTGATGTGCAACAAGTTAATGCATTTAGC...GCATCTCCTCATCCATCGGTGGACACTAACCACAGCTATAACCGGGACAACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS GCA 90 bp AATCTGGTCAGTGTCTTCTTTGCTGCAGATAGGTGTGTCCCTTTTTaGAAAATCAGATATCTGGGAGTGAGACAGCCGAGTCTGACCATG +
Preference number: 5 (lower is better)
Translates to: NLVSVFFAADRCVPF*KIRYLGVRQPSLTM
Trigger: CATGGTCAGACTCGGCTGTCTCACTCCCAGATATCTGATTTTGCAAAAAGGGACACACCTATCTGCAGCAAAGAAGACACTGACCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 90 bp TATTCCGCATTTTTAAAAGCCGGAGAAACCCACCTGGGAGTAGAATaGAGTGTCTCCTGGCACCAGATCCTGAAATTCACAACACACAAG +
Preference number: 5 (lower is better)
Translates to: YSAFLKAGETHLGVE*SVSWHQILKFTTHK
Trigger: CTTGTGTGTTGTGAATTTCAGGATCTGGTGCCAGGAGACACTGCATTCTACTCCCAGGTGGGTTTCTCCGGCTTTTAAAAATGCGGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS-3UTR CAA 90 bp GCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATAAGGTCAAGAAGCTCCTaGGCCAACAGCTTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: AETGNFFYASEESNRGFIRSRSS*ANSLGC
Trigger: ACAGCCCAAGCTGTTGGCCAAGGAGCTTCTTGACCT...TATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GAGAGAAGTGGGCCAGTAAGGGAGAGGGCTAGAGAGAGGACACCAGTTTACATAGTATTTTTGAGGCCTTaGAAGATTGATGGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: ERSGPVRERARERTPVYIVFLRP*KIDGFP
Trigger: TGGAAAGCCATCAATCTTCAAAGGCCTCAAAAATAC...TATGTAAACTGGTGTCCTCTCTCTAGCCCTCTCCCTTACTGGCCCACTTCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp CTCCGGCCCTGGGGTCAGTCTGTATTCACACCTAAGGGCAAGCTAAGTTGTGAAAAAGCAGGCCAACGATaGCAAAAGACAGAAATAAAA +
Preference number: 5 (lower is better)
Translates to: LRPWGQSVFTPKGKLSCEKAGQR*QKTEIK
Trigger: TTTTATTTCTGTCTTTTGCAATCGTTGGCCTGCTTT...TTCACAACTTAGCTTGCCCTTAGGTGTGAATACAGACTGACCCCAGGGCCGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS TCA 90 bp GGGTTTCCAAGGTGTAGATCTCTCAAAGCTTTTCTTGAGAAATCCTaGAGCCAGTTATCGTCCTCAACTCTACATCAATGTCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GFPRCRSLKAFLEKS*SQLSSSTLHQCPTS
Trigger: GGAGGTGGGACATTGATGTAGAGTTGAGGACGATAACTGGCTTCAGGATTTCTCAAGAAAAGCTTTGAGAGATCTACACCTTGGAAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS TCA 90 bp CCAAGTCAGAAAGTCATTTTCGGGGGCATTTGGAAATCTTTGGAGTaGACTTCCCGATGCTATGAACATTGTTTGAGACCCTGGAGACAC +
Preference number: 5 (lower is better)
Translates to: PSQKVIFGGIWKSLE*TSRCYEHCLRPWRH
Trigger: GTGTCTCCAGGGTCTCAAACAATGTTCATAGCATCGGGAAGTTCACTCCAAAGATTTCCAAATGCCCCCGAAAATGACTTTCTGACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS-3UTR CAA 90 bp AATCTAGCTGTCCTGAAGGTGAGCCTTTATAATCTAAGAACCGAAATGGCATCAAAGCCTCCTCACGGGTaGGTGAACACAGCAGTATCT +
Preference number: 5 (lower is better)
Translates to: NLAVLKVSLYNLRTEMASKPPHG*VNTAVS
Trigger: AGATACTGCTGTGTTCACCAACCCGTGAGGAGGCTT...TGATGCCATTTCGGTTCTTAGATTATAAAGGCTCACCTTCAGGACAGCTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS TCA 90 bp AAGGATGTCTGTCCTCTCTCTGGTCCTTTAAATTTCTCCTGGCTATaGTTGGATCACACCAGCCCACAAGCTAACGAGACAATTTTTAGC +
Preference number: 5 (lower is better)
Translates to: KDVCPLSGPLNFSWL*LDHTSPQANETIFS
Trigger: GCTAAAAATTGTCTCGTTAGCTTGTGGGCTGGTGTGATCCAATCATAGCCAGGAGAAATTTAAAGGACCAGAGAGAGGACAGACATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS-3UTR CAA 90 bp ATCAAGGAATATTTCAGGTGTAAACTGAATATGCCACGAGGCCTCCTCTTCATGCAGTGGGCTAGAATCTaGATCCAGTTTTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: IKEYFRCKLNMPRGLLFMQWARI*IQFSPD
Trigger: GTCTGGAGAAAACTGGATCAAGATTCTAGCCCACTG...CATGAAGAGGAGGCCTCGTGGCATATTCAGTTTACACCTGAAATATTCCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp AAATGGAGCACAACCCGGATCCTTTGTTTCTTTGAATTCAGCCAACAAGCTGGCACAACTTCATTGCTTTaGGATAAGGTGTCTGACCTC +
Preference number: 5 (lower is better)
Translates to: KWSTTRILCFFEFSQQAGTTSLL*DKVSDL
Trigger: GAGGTCAGACACCTTATCCAAAAGCAATGAAGTTGT...GCCAGCTTGTTGGCTGAATTCAAAGAAACAAAGGATCCGGGTTGTGCTCCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS-3UTR CAA 90 bp CTTACAAACAAACTGCTAGGTAGCAGTAGCACTTTGACAAATGGAGCACAACCCGGATCCTTTGTTTCTTaGAATTCAGCCAACAAGCTG +
Preference number: 5 (lower is better)
Translates to: LTNKLLGSSSTLTNGAQPGSFVS*NSANKL
Trigger: CAGCTTGTTGGCTGAATTCAAAGAAACAAAGGATCC...GGGTTGTGCTCCATTTGTCAAAGTGCTACTGCTACCTAGCAGTTTGTTTGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650014.1
CDS TCA 90 bp GACATTCCATCCCTTTTCTTAACTCTTTACAACTTGGAGAACCCATaGGTTTCCACAAGGTCAAGCAAAAAGTCCCATTCTGTAGCAGCA +
Preference number: 5 (lower is better)
Translates to: DIPSLFLTLYNLENP*VSTRSSKKSHSVAA
Trigger: TGCTGCTACAGAATGGGACTTTTTGCTTGACCTTGTGGAAACTCATGGGTTCTCCAAGTTGTAAAGAGTTAAGAAAAGGGATGGAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS-3UTR CAA 90 bp ATACCACCTCTGCGGAAACCTTTTTGTGCCATCTTGAATAACCCAACTAAAGTCTCATGTAGTTTACGATaGCTTGACCTCTTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: IPPLRKPFCAILNNPTKVSCSLR*LDLLSD
Trigger: GTCAGACAAGAGGTCAAGCAATCGTAAACTACATGA...GACTTTAGTTGGGTTATTCAAGATGGCACAAAAAGGTTTCCGCAGAGGTGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp GCTGAAACAGGCAATTTCTTTTACGCATCCGAAGAATCCAATAGGGGCTTTATAGAGAGAGAACCACTTTaGGCCATTATCACCTTACGT +
Preference number: 5 (lower is better)
Translates to: AETGNFFYASEESNRGFIEREPL*AIITLR
Trigger: ACGTAAGGTGATAATGGCCAAAAGTGGTTCTCTCTC...TATAAAGCCCCTATTGGATTCTTCGGATGCGTAAAAGAAATTGCCTGTTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp AATCTAGCTGTCCTGAAGGTGAGCCTTTATAATCTAAGAACCGAAATGGCATCACTCTCAAAGCTTTTCTaGAGAAATCCTGAAGCCAGT +
Preference number: 5 (lower is better)
Translates to: NLAVLKVSLYNLRTEMASLSKLF*RNPEAS
Trigger: ACTGGCTTCAGGATTTCTCAAGAAAAGCTTTGAGAG...TGATGCCATTTCGGTTCTTAGATTATAAAGGCTCACCTTCAGGACAGCTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS-3UTR CAA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCCGTGCTGCATGGATTTaGGACTTACTCTGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: TKISPSESLESFNNVTGIRAAWI*DLLCFL
Trigger: CAGAAAGCAGAGTAAGTCCAAAATCCATGCAGCACG...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS-3UTR CAA 90 bp AATCTAGCTGTCCTGAAGGTGAGCCTTTATAATCTAAGAACCGAAATGGCATCACTAGAAGTCAAATTGTaGAGCTTTGATATGCTGTCA +
Preference number: 5 (lower is better)
Translates to: NLAVLKVSLYNLRTEMASLEVKL*SFDMLS
Trigger: TGACAGCATATCAAAGCTCAACAATTTGACTTCTAG...TGATGCCATTTCGGTTCTTAGATTATAAAGGCTCACCTTCAGGACAGCTAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS TCA 90 bp AAAATAAGTTATGGTCTCCTGGAGGGTTCCCAAATATCAAATAACTaGAAGAGTTTTTCTTTCGACCATCTGAGTCAAGATGTGGTTTGT +
Preference number: 5 (lower is better)
Translates to: KISYGLLEGSQISNN*KSFSFDHLSQDVVC
Trigger: ACAAACCACATCTTGACTCAGATGGTCGAAAGAAAAACTCTTTCAGTTATTTGATATTTGGGAACCCTCCAGGAGACCATAACTTATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS-3UTR CAA 90 bp ACAAAAATATCCCCCAGTGAATCCCTAGAATCATTTAATAATGTAACCGGTATCCTCCTCACAACTTCATaGCTAGAAAAATCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: TKISPSESLESFNNVTGILLTTS*LEKSPF
Trigger: AAAGGGAGATTTTTCTAGCAATGAAGTTGTGAGGAG...GATACCGGTTACATTATTAAATGATTCTAGGGATTCACTGGGGGATATTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp CTGGCTGAGCCCAGTGCGCCCGCCGCCCGCTGCCGCTaGCTCTGCCTCTGGCGCGCCTTGGACGGCGAGTCC +
Preference number: 6 (lower is better)
Translates to: LAEPSAPAARCR*LCLWRALDGES
Trigger: GGACTCGCCGTCCAAGGCGCGCCAGAGGCAGAGGCAGCGGCAGCGGGCGGCGGGCGCACTGGGCTCAGCCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp GCGCCCTCGCGGCCCAGCGACGGAGTCCGCAGGATCTaGGATCGCGACGGCGTCAGGCGGCCCGTGTCGCCC +
Preference number: 6 (lower is better)
Translates to: APSRPSDGVRRI*DRDGVRRPVSP
Trigger: GGGCGACACGGGCCGCCTGACGCCGTCGCGATCGCAGATCCTGCGGACTCCGTCGCTGGGCCGCGAGGGCGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 72 bp TCGTCTGAGACGGCGGCACGGCCCGCGCCCTTGTCGTaGGCGCCCTCGCGGCCCAGCGACGGAGTCCGCAGG +
Preference number: 6 (lower is better)
Translates to: SSETAARPAPLS*APSRPSDGVRR
Trigger: CCTGCGGACTCCGTCGCTGGGCCGCGAGGGCGCCCACGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CAA 72 bp CGCAGCTCGTCTGAGACGGCGGCACGGCCCGCGCCCTaGTCGTGGGCGCCCTCGCGGCCCAGCGACGGAGTC +
Preference number: 6 (lower is better)
Translates to: RSSSETAARPAP*SWAPSRPSDGV
Trigger: GACTCCGTCGCTGGGCCGCGAGGGCGCCCACGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CAA 90 bp TACCACTGGCGCAGCTCGTCTGAGACGGCGGCACGGCCCGCGCCCTaGTCGTGGGCGCCCTCGCGGCCCAGCGACGGAGTCCGCAGGATC +
Preference number: 6 (lower is better)
Translates to: YHWRSSSETAARPAP*SWAPSRPSDGVRRI
Trigger: GATCCTGCGGACTCCGTCGCTGGGCCGCGAGGGCGCCCACGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 72 bp GGCGGTGGAACGCTGGTACCACTGGCGCAGCTCGTCTaGGACGGCGGCACGGCCCGCGCCCTTGTCGTGGGC +
Preference number: 6 (lower is better)
Translates to: GGGTLVPLAQLV*DGGTARALVVG
Trigger: GCCCACGACAAGGGCGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS GCA 72 bp GGGGACTCCGGACCCGCAGGTCTGGCGTGGACGGCATaGTGGACTGGGAGTTCCAGTGCGGGAGGCCGCGGA +
Preference number: 6 (lower is better)
Translates to: GDSGPAGLAWTA*WTGSSSAGGRG
Trigger: TCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp CGGACCCGCAGGTCTGGCGTGGACGGCATGCTGGACTaGGAGTTCCAGTGCGGGAGGCCGCGGATGGGGCTG +
Preference number: 6 (lower is better)
Translates to: RTRRSGVDGMLD*EFQCGRPRMGL
Trigger: CAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp GACTCCGGACCCGCAGGTCTGGCGTGGACGGCATGCTaGACTGGGAGTTCCAGTGCGGGAGGCCGCGGATGG +
Preference number: 6 (lower is better)
Translates to: DSGPAGLAWTAC*TGSSSAGGRGW
Trigger: CCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TGCTCCTTGTGCGAGGCGGTGGAACGCTGGTACCACTaGCGCAGCTCGTCTGAGACGGCGGCACGGCCCGCG +
Preference number: 6 (lower is better)
Translates to: CSLCEAVERWYH*RSSSETAARPA
Trigger: CGCGGGCCGTGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CAA 90 bp CTCCCCTCTCCCGGGTGGCGCCTCTGCACCGCCACCCGGTCTAACTaGAATCCCCAGCGCCTGCAAAGCGCCGTTCCTGGAGAAGCCTGC +
Preference number: 6 (lower is better)
Translates to: LPSPGWRLCTATRSN*NPQRLQSAVPGEAC
Trigger: GCAGGCTTCTCCAGGAACGGCGCTTTGCAGGCGCTGGGGATTCAAGTTAGACCGGGTGGCGGTGCAGAGGCGCCACCCGGGAGAGGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS TCA 72 bp CCGGGTGGCGCCTCTGCACCGCCACCCGGTCTAACTTaGATCCCCAGCGCCTGCAAAGCGCCGTTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: PGGASAPPPGLT*IPSACKAPFLE
Trigger: CTCCAGGAACGGCGCTTTGCAGGCGCTGGGGATTCAAGTTAGACCGGGTGGCGGTGCAGAGGCGCCACCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS GCA 72 bp GCGGGAGGCCGCGGATGGGGCTGTTCTGCAAGGAGTTaGTTCCTCCGCCGGCTTCCGCACAGCTTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: AGGRGWGCSARS*FLRRLPHSFLC
Trigger: GCACAGGAAGCTGTGCGGAAGCCGGCGGAGGAAGCAACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp CCCTGCTGTGCGCCACGAAGGTGCTCTGGGAGGAGGTaGTGTACTGCGAGCCGCTGTCCGAGGAGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: PCCAPRRCSGRR*CTASRCPRRWS
Trigger: GCTCCACCTCCTCGGACAGCGGCTCGCAGTACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACAGCAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 72 bp GGACGTAGTGGGGACTCCGGACCCGCAGGTCTGGCGTaGACGGCATGCTGGACTGGGAGTTCCAGTGCGGGA +
Preference number: 6 (lower is better)
Translates to: GRSGDSGPAGLA*TACWTGSSSAG
Trigger: TCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCCACTACGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp AGGCGGCTGTGCTCCTTGTGCGAGGCGGTGGAACGCTaGTACCACTGGCGCAGCTCGTCTGAGACGGCGGCA +
Preference number: 6 (lower is better)
Translates to: RRLCSLCEAVER*YHWRSSSETAA
Trigger: TGCCGCCGTCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 72 bp CCATGTCGGGAGCCGTGGTGGCTCCCCTCTCCCGGGTaGCGCCTCTGCACCGCCACCCGGTCTAACTTGAAT +
Preference number: 6 (lower is better)
Translates to: PCREPWWLPSPG*RLCTATRSNLN
Trigger: ATTCAAGTTAGACCGGGTGGCGGTGCAGAGGCGCCACCCGGGAGAGGGGAGCCACCACGGCTCCCGACATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS CCA 72 bp TCCAAGGGATCCGAGGAACTTCTGGCTGCAAGCGGCTaGTACCCCGGAACGGGCGTCCCATTCGCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: SKGSEELLAASG*YPGTGVPFARA
Trigger: CGCCCGGGCGAATGGGACGCCCGTTCCGGGGTACCAGCCGCTTGCAGCCAGAAGTTCCTCGGATCCCTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649099.1
CDS CAA 72 bp GGCGTGGCGCCGCCCTCGATGTACAGCGGGTACTCCTaGATGCGGTACTGCGAGCTGGGCTGGCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: GVAPPSMYSGYS*MRYCELGWLWL
Trigger: CAGCCAGAGCCAGCCCAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGTACATCGAGGGCGGCGCCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CAA 72 bp GAGGTGGAGCTGGTGTGCGACAGGCGGCTGTGCTCCTaGTGCGAGGCGGTGGAACGCTGGTACCACTGGCGC +
Preference number: 6 (lower is better)
Translates to: EVELVCDRRLCS*CEAVERWYHWR
Trigger: GCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CAA 72 bp CCCGGGTGGCGCCTCTGCACCGCCACCCGGTCTAACTaGAATCCCCAGCGCCTGCAAAGCGCCGTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: PGWRLCTATRSN*NPQRLQSAVPG
Trigger: TCCAGGAACGGCGCTTTGCAGGCGCTGGGGATTCAAGTTAGACCGGGTGGCGGTGCAGAGGCGCCACCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS CAA 90 bp ACCACCACGGGCGTGGCGCCGCCCTCGATGTACAGCGGGTACTCCTaGATGCGGTACTGCGAGCTGGGCTGGCTCTGGCTGTGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: TTTGVAPPSMYSGYS*MRYCELGWLWLCRY
Trigger: GTACCTGCACAGCCAGAGCCAGCCCAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGTACATCGAGGGCGGCGCCACGCCCGTGGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CAA 90 bp CTGTCCGAGGAGGTGGAGCTGGTGTGCGACAGGCGGCTGTGCTCCTaGTGCGAGGCGGTGGAACGCTGGTACCACTGGCGCAGCTCGTCT +
Preference number: 6 (lower is better)
Translates to: LSEEVELVCDRRLCS*CEAVERWYHWRSSS
Trigger: AGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 72 bp CTCAGGGGGCGTCCCTCCAGCTGGCCTCTGCCTACCTaGAGACAGCAGGCTGCCGCTGCTGCCGCTGATGAT +
Preference number: 6 (lower is better)
Translates to: LRGRPSSWPLPT*RQQAAAAAADD
Trigger: ATCATCAGCGGCAGCAGCGGCAGCCTGCTGTCTTCAGGTAGGCAGAGGCCAGCTGGAGGGACGCCCCCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000492155.5
CDS TCA 72 bp GCGTGGCGCCGCCCTCGATGTACAGCGGGTACTCCTTaGTGCGGTACTGCGAGCTGGGCTGGCTCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: AWRRPRCTAGTP*CGTASWAGSGC
Trigger: ACAGCCAGAGCCAGCCCAGCTCGCAGTACCGCATCAAGGAGTACCCGCTGTACATCGAGGGCGGCGCCACGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS GCA 72 bp GAGTTCCAGTGCGGGAGGCCGCGGATGGGGCTGTTCTaGAAGGAGTTGCTTCCTCCGCCGGCTTCCGCACAG +
Preference number: 6 (lower is better)
Translates to: EFQCGRPRMGLF*KELLPPPASAQ
Trigger: CTGTGCGGAAGCCGGCGGAGGAAGCAACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp TCTGGCGTGGACGGCATGCTGGACTGGGAGTTCCAGTaGGGGAGGCCGCGGATGGGGCTGTTCTGCAAGGAG +
Preference number: 6 (lower is better)
Translates to: SGVDGMLDWEFQ*GRPRMGLFCKE
Trigger: CTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp CCCTGGGACTCCAGGCTGGAGCTCCGGTGCCTAAAGTaGAGTGCGAGGCTGTGCAGTCGGGTGGGGCTGATG +
Preference number: 6 (lower is better)
Translates to: PWDSRLELRCLK*SARLCSRVGLM
Trigger: CATCAGCCCCACCCGACTGCACAGCCTCGCACTGCACTTTAGGCACCGGAGCTCCAGCCTGGAGTCCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp GCGCCGGGTAGTAGTGCTCCGAGCTCGAGTGGCTGGTaGACGACGAGCAGTCGTCCATGGGGTCTGAGCCGT +
Preference number: 6 (lower is better)
Translates to: APGSSAPSSSGW*TTSSRPWGLSR
Trigger: ACGGCTCAGACCCCATGGACGACTGCTCGTCGTGCACCAGCCACTCGAGCTCGGAGCACTACTACCCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TGCTGGACTGGGAGTTCCAGTGCGGGAGGCCGCGGATaGGGCTGTTCTGCAAGGAGTTGCTTCCTCCGCCGG +
Preference number: 6 (lower is better)
Translates to: CWTGSSSAGGRG*GCSARSCFLRR
Trigger: CCGGCGGAGGAAGCAACTCCTTGCAGAACAGCCCCATCCGCGGCCTCCCGCACTGGAACTCCCAGTCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp AGCTCGAGTGGCTGGTGCACGACGAGCAGTCGTCCATaGGGTCTGAGCCGTTGCTGCTACGAGTCCGCGGGG +
Preference number: 6 (lower is better)
Translates to: SSSGWCTTSSRP*GLSRCCYESAG
Trigger: CCCCGCGGACTCGTAGCAGCAACGGCTCAGACCCCATGGACGACTGCTCGTCGTGCACCAGCCACTCGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TGCTGTACTGCGAGCCGCTGTCCGAGGAGGTGGAGCTaGTGTGCGACAGGCGGCTGTGCTCCTTGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: CCTASRCPRRWS*CATGGCAPCAR
Trigger: CCTCGCACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCGGCTCGCAGTACAGCA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 72 bp CGCCGTTCCTGGAGAAGCCTGCTCCTCTCCTCGCCCTaGTCCCCTCTCTCTTTCTCCCTCTCCCGCGCTCTC +
Preference number: 6 (lower is better)
Translates to: RRSWRSLLLSSP*SPLSFSLSRAL
Trigger: GAGAGCGCGGGAGAGGGAGAAAGAGAGAGGGGACCAGGGCGAGGAGAGGAGCAGGCTTCTCCAGGAACGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS TCA 72 bp CAGCTGACGTGGCCTTGCACATCTGGGGCATCCTGGTaGCCCTGCTGTGCGCCACGAAGGTGCTCTGGGAGG +
Preference number: 6 (lower is better)
Translates to: QLTWPCTSGASW*PCCAPRRCSGR
Trigger: CCTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGCAAGGCCACGTCAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS GCA 72 bp GCACTGCCATGGTCTCCGATTCCCATGCACGAATCCTaGTGCCGAGTCAGTCCTCCTGGGCCCCGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: ALPWSPIPMHES*CRVSPPGPRVA
Trigger: AGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357447.7
ENST00000475141.2
ENST00000493380.5
CDS GCA 72 bp CTGGAGCTCCGGTGCCTAAAGTGCAGTGCGAGGCTGTaGAGTCGGGTGGGGCTGATGTCCACCGACCTCGTG +
Preference number: 6 (lower is better)
Translates to: LELRCLKCSARL*SRVGLMSTDLV
Trigger: CACGAGGTCGGTGGACATCAGCCCCACCCGACTGCACAGCCTCGCACTGCACTTTAGGCACCGGAGCTCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp GGAATGGACGTAGTGGGGACTCCGGACCCGCAGGTCTaGCGTGGACGGCATGCTGGACTGGGAGTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: GMDVVGTPDPQV*RGRHAGLGVPV
Trigger: CACTGGAACTCCCAGTCCAGCATGCCGTCCACGCCAGACCTGCGGGTCCGGAGTCCCCACTACGTCCATTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp CTCCCGGTGTCGTTTTCCGAGCCCAGGAGCTTGCCCTaGGACTCCAGGCTGGAGCTCCGGTGCCTAAAGTGC +
Preference number: 6 (lower is better)
Translates to: LPVSFSEPRSLP*DSRLELRCLKC
Trigger: GCACTTTAGGCACCGGAGCTCCAGCCTGGAGTCCCAGGGCAAGCTCCTGGGCTCGGAAAACGACACCGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TCTGCGCCGGGTAGTAGTGCTCCGAGCTCGAGTGGCTaGTGCACGACGAGCAGTCGTCCATGGGGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: SAPGSSAPSSSG*CTTSSRPWGLS
Trigger: GCTCAGACCCCATGGACGACTGCTCGTCGTGCACCAGCCACTCGAGCTCGGAGCACTACTACCCGGCGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp CCTTGGACGGCGAGTCCTCGGCCAGCGTGGAGTAGTTaGCGTTCATCTGCGCCGGGTAGTAGTGCTCCGAGC +
Preference number: 6 (lower is better)
Translates to: PWTASPRPAWSS*RSSAPGSSAPS
Trigger: GCTCGGAGCACTACTACCCGGCGCAGATGAACGCCAACTACTCCACGCTGGCCGAGGACTCGCCGTCCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TCTGGCGCGCCTTGGACGGCGAGTCCTCGGCCAGCGTaGAGTAGTTGGCGTTCATCTGCGCCGGGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: SGAPWTASPRPA*SSWRSSAPGSS
Trigger: ACTACTACCCGGCGCAGATGAACGCCAACTACTCCACGCTGGCCGAGGACTCGCCGTCCAAGGCGCGCCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TGTGCGACAGGCGGCTGTGCTCCTTGTGCGAGGCGGTaGAACGCTGGTACCACTGGCGCAGCTCGTCTGAGA +
Preference number: 6 (lower is better)
Translates to: CATGGCAPCARR*NAGTTGAARLR
Trigger: TCTCAGACGAGCTGCGCCAGTGGTACCAGCGTTCCACCGCCTCGCACAAGGAGCACAGCCGCCTGTCGCACA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 72 bp AGGAGGTGCTGTACTGCGAGCCGCTGTCCGAGGAGGTaGAGCTGGTGTGCGACAGGCGGCTGTGCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: RRCCTASRCPRR*SWCATGGCAPC
Trigger: ACAAGGAGCACAGCCGCCTGTCGCACACCAGCTCCACCTCCTCGGACAGCGGCTCGCAGTACAGCACCTCCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS CCA 72 bp ATCCTGGTGACCCTGCTGTGCGCCACGAAGGTGCTCTaGGAGGAGGTGCTGTACTGCGAGCCGCTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: ILVTLLCATKVL*EEVLYCEPLSE
Trigger: CTCGGACAGCGGCTCGCAGTACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS TCA 72 bp GTGGCTGGTGCACGACGAGCAGTCGTCCATGGGGTCTaGGCCGTTGCTGCTACGAGTCCGCGGGGTGTAGAA +
Preference number: 6 (lower is better)
Translates to: VAGARRAVVHGV*AVAATSPRGVE
Trigger: TTCTACACCCCGCGGACTCGTAGCAGCAACGGCTCAGACCCCATGGACGACTGCTCGTCGTGCACCAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp GGGCACCAGCTGCACTGCCATGGTCTCCGATTCCCATaGACGAATCCTGCTGCCGAGTCAGTCCTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: GHQLHCHGLRFP*TNPAAESVLLG
Trigger: GCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357447.7
ENST00000475141.2
ENST00000493380.5
CDS GCA 72 bp GCCTTGCACATCTGGGGCATCCTGGTGACCCTGCTGTaGGCCACGAAGGTGCTCTGGGAGGAGGTGCTGTAC +
Preference number: 6 (lower is better)
Translates to: ALHIWGILVTLL*ATKVLWEEVLY
Trigger: GTACAGCACCTCCTCCCAGAGCACCTTCGTGGCGCACAGCAGGGTCACCAGGATGCCCCAGATGTGCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000495956.2
CDS GCA 72 bp CCTGGGCGACTCAGCACCGGATATGAGCGCACATTCTaGCAGGAGGACGTTGTCAGGAGCCACGCGTGGCTC +
Preference number: 6 (lower is better)
Translates to: PGRLSTGYERTF*QEDVVRSHAWL
Trigger: GAGCCACGCGTGGCTCCTGACAACGTCCTCCTGGCAGAATGTGCGCTCATATCCGGTGCTGAGTCGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CCA 72 bp GGCCGAGAGCTGAGTCGGGCACCAGCTGCACTGCCATaGTCTCCGATTCCCATGCACGAATCCTGCTGCCGA +
Preference number: 6 (lower is better)
Translates to: GRELSRAPAALP*SPIPMHESCCR
Trigger: TCGGCAGCAGGATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357447.7
ENST00000475141.2
ENST00000493380.5
CDS CAA 72 bp CTGCACAGCTGGCTCAGCGAGACTGCCGTGTCCCGCTaGTGGGCAAGTGACGCGTCTGGGGAGAGTGATCCA +
Preference number: 6 (lower is better)
Translates to: LHSWLSETAVSR*WASDASGESDP
Trigger: TGGATCACTCTCCCCAGACGCGTCACTTGCCCACAAGCGGGACACGGCAGTCTCGCTGAGCCAGCTGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS CAA 90 bp AGGCTGCCGCTGCTGCCGCTGATGATCTTCCCCTTGCTACCCATGTaGGCCAGCTTCGAGGTCTTCAGCGTCCCCGTCTCGGTCAGGTCG +
Preference number: 6 (lower is better)
Translates to: RLPLLPLMIFPLLPM*ASFEVFSVPVSVRS
Trigger: CGACCTGACCGAGACGGGGACGCTGAAGACCTCGAAGCTGGCCAACATGGGTAGCAAGGGGAAGATCATCAGCGGCAGCAGCGGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CAA 90 bp CCTGAAGACAGCAGGCTGCCGCTGCTGCCGCTGATGATCTTCCCCTaGCTACCCATGTTGGCCAGCTTCGAGGTCTTCAGCGTCCCCGTC +
Preference number: 6 (lower is better)
Translates to: PEDSRLPLLPLMIFP*LPMLASFEVFSVPV
Trigger: GACGGGGACGCTGAAGACCTCGAAGCTGGCCAACATGGGTAGCAAGGGGAAGATCATCAGCGGCAGCAGCGGCAGCCTGCTGTCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CCA 72 bp CACAGCTGGCTCAGCGAGACTGCCGTGTCCCGCTTGTaGGCAAGTGACGCGTCTGGGGAGAGTGATCCAGAA +
Preference number: 6 (lower is better)
Translates to: HSWLSETAVSRL*ASDASGESDPE
Trigger: TTCTGGATCACTCTCCCCAGACGCGTCACTTGCCCACAAGCGGGACACGGCAGTCTCGCTGAGCCAGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS CCA 72 bp TCCCATGCACGAATCCTGCTGCCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGAGCATCCAAAAGCACC +
Preference number: 6 (lower is better)
Translates to: SHARILLPSQSS*APGGYRASKST
Trigger: GGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000475141.2
CDS CAA 90 bp CGCCTTCGGTCGGCCTTTGTTGGTTTGGTCGTGGCAGTCCCCAGCTaGGCAGACTTTTCCCTTCCAGGAGAGGGAGGAGAGGTGGAGACC +
Preference number: 6 (lower is better)
Translates to: RLRSAFVGLVVAVPS*ADFSLPGEGGEVET
Trigger: GGTCTCCACCTCTCCTCCCTCTCCTGGAAGGGAAAAGTCTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGACCGAAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS GCA 72 bp TCCATCAGCAGGCCGAGAGCTGAGTCGGGCACCAGCTaGACTGCCATGGTCTCCGATTCCCATGCACGAATC +
Preference number: 6 (lower is better)
Translates to: SISRPRAESGTS*TAMVSDSHARI
Trigger: GATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 72 bp GCCTCTGACGCAGGGTTTCCTCCAGAGCTTCCTGCCTaGACTTCAAGGCAGCCAGCATGTCCTTCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: ASDAGFPPELPA*TSRQPACPSWP
Trigger: CGGCCAAGAAGGACATGCTGGCTGCCTTGAAGTCCAGGCAGGAAGCTCTGGAGGAAACCCTGCGTCAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 72 bp AATCCTGCTGCCGAGTCAGTCCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAGCACCGCTCGCAATCT +
Preference number: 6 (lower is better)
Translates to: NPAAESVLLGPG*LQSIQKHRSQS
Trigger: AGATTGCGAGCGGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp AATCCTGCTGCCGAGTCAGTCCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAGCACCTGGGAACTGGA +
Preference number: 6 (lower is better)
Translates to: NPAAESVLLGPG*LQSIQKHLGTG
Trigger: TCCAGTTCCCAGGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 72 bp AATCCTGCTGCCGAGTCAGTCCTCCTGGGCCCCGGGTaGCTACAGAGCATCCAAAAGCACAGCTTCACGTGG +
Preference number: 6 (lower is better)
Translates to: NPAAESVLLGPG*LQSIQKHSFTW
Trigger: CCACGTGAAGCTGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS CCA 72 bp TCCCATGCACGAATCCTGCTGCCGAGTCAGTCCTCCTaGGCCCCGGGTGGCTACAGAGCATCCAAAAGCACA +
Preference number: 6 (lower is better)
Translates to: SHARILLPSQSS*APGGYRASKST
Trigger: TGTGCTTTTGGATGCTCTGTAGCCACCCGGGGCCCAGGAGGACTGACTCGGCAGCAGGATTCGTGCATGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS CCA 72 bp CACAAACAGCAGCTCTCCTCCCGGCCGGCAGACACATaGAAGGACAGCCTCTTTCAGCCTCATTCAGCCGCG +
Preference number: 6 (lower is better)
Translates to: HKQQLSSRPADT*KDSLFQPHSAA
Trigger: CGCGGCTGAATGAGGCTGAAAGAGGCTGTCCTTCCATGTGTCTGCCGGCCGGGAGGAGAGCTGCTGTTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CAA 72 bp CTGCTGCCGCTGATGATCTTCCCCTTGCTACCCATGTaGGCCAGCTTCGAGGTCTTCAGCGTCCCCGTCTCG +
Preference number: 6 (lower is better)
Translates to: LLPLMIFPLLPM*ASFEVFSVPVS
Trigger: CGAGACGGGGACGCTGAAGACCTCGAAGCTGGCCAACATGGGTAGCAAGGGGAAGATCATCAGCGGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CAA 72 bp AGCAGGCTGCCGCTGCTGCCGCTGATGATCTTCCCCTaGCTACCCATGTTGGCCAGCTTCGAGGTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SRLPLLPLMIFP*LPMLASFEVFS
Trigger: GCTGAAGACCTCGAAGCTGGCCAACATGGGTAGCAAGGGGAAGATCATCAGCGGCAGCAGCGGCAGCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CAA 90 bp TCTGTCCCTCTGCACAGCTGGCTCAGCGAGACTGCCGTGTCCCGCTaGTGGGCAAGTGACGCGTCTGGGGAGAGTGATCCAGAAATGTCA +
Preference number: 6 (lower is better)
Translates to: SVPLHSWLSETAVSR*WASDASGESDPEMS
Trigger: TGACATTTCTGGATCACTCTCCCCAGACGCGTCACTTGCCCACAAGCGGGACACGGCAGTCTCGCTGAGCCAGCTGTGCAGAGGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS TCA 72 bp AGATGGCACCATTGCCCTCCAGCCTGCACGACACAGTaGGACTCCATCATCAGCAGGCCGAGAGCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: RWHHCPPACTTQ*DSIISRPRAES
Trigger: CGACTCAGCTCTCGGCCTGCTGATGATGGAGTCTCACTGTGTCGTGCAGGCTGGAGGGCAATGGTGCCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS GCA 72 bp ATCATCAGCAGGCCGAGAGCTGAGTCGGGCACCAGCTaGACTGCCATGGTCTCCGATTCCCATGCACGAATC +
Preference number: 6 (lower is better)
Translates to: IISRPRAESGTS*TAMVSDSHARI
Trigger: GATTCGTGCATGGGAATCGGAGACCATGGCAGTGCAGCTGGTGCCCGACTCAGCTCTCGGCCTGCTGATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357447.7
ENST00000493380.5
CDS GCA 72 bp TTTTTGCGCTTCCAAGGGATCCGAGGAACTTCTGGCTaGAAGCGGCTGGTACCCCGGAACGGGCGTCCCATT +
Preference number: 6 (lower is better)
Translates to: FLRFQGIRGTSG*KRLVPRNGRPI
Trigger: AATGGGACGCCCGTTCCGGGGTACCAGCCGCTTGCAGCCAGAAGTTCCTCGGATCCCTTGGAAGCGCAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649099.1
CDS CCA 72 bp TCGAGGTCTTCAGCGTCCCCGTCTCGGTCAGGTCGATaGCGATCTCACTCAGGCTGCGTGCTGCATGGATTT +
Preference number: 6 (lower is better)
Translates to: SRSSASPSRSGR*RSHSGCVLHGF
Trigger: AAATCCATGCAGCACGCAGCCTGAGTGAGATCGCCATCGACCTGACCGAGACGGGGACGCTGAAGACCTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CAA 90 bp GGCGACTCAGCACCGGATATGAGCGCACATTCTGCCAGGAGGACGTaGTCAGGAGCCACGCGTGGCTCATCTGTTTTTGACACAGAGGGG +
Preference number: 6 (lower is better)
Translates to: GDSAPDMSAHSARRT*SGATRGSSVFDTEG
Trigger: CCCCTCTGTGTCAAAAACAGATGAGCCACGCGTGGCTCCTGACAACGTCCTCCTGGCAGAATGTGCGCTCATATCCGGTGCTGAGTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CAA 90 bp GACTCTGTCTTCACAGTAGGCCAGGGAAGGGTGCTCCTTCAGGGCTaGGGTGGGAAGGGCTGGCAGCTTCTTCAAGTCACTCCTCACAAC +
Preference number: 6 (lower is better)
Translates to: DSVFTVGQGRVLLQG*GGKGWQLLQVTPHN
Trigger: GTTGTGAGGAGTGACTTGAAGAAGCTGCCAGCCCTTCCCACCCAAGCCCTGAAGGAGCACCCTTCCCTGGCCTACTGTGAAGACAGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
CDS GCA 72 bp GGCGGCCCTCCGTCATCTGATAGACGGCCCTGGAGATaGACCATGGTTTTAGCAGCAGCTGCAGAACTCGAA +
Preference number: 6 (lower is better)
Translates to: GGPPSSDRRPWR*TMVLAAAAELE
Trigger: TTCGAGTTCTGCAGCTGCTGCTAAAACCATGGTGCATCTCCAGGGCCGTCTATCAGATGACGGAGGGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS GCA 72 bp GGACATGCATACCACGTGTGCACTGCAATGCCGCTGTaGCCAAACGTCCTCCTTGTCACTGAAGCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: GHAYHVCTAMPL*PNVLLVTEALR
Trigger: ACGCAGGGCTTCAGTGACAAGGAGGACGTTTGGGCACAGCGGCATTGCAGTGCACACGTGGTATGCATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS GCA 72 bp GGCCATAGCCCAGATGGACTTGATCAATGCCGGACATaGATACCACGTGTGCACTGCAATGCCGCTGTGCCC +
Preference number: 6 (lower is better)
Translates to: GHSPDGLDQCRT*IPRVHCNAAVP
Trigger: GGGCACAGCGGCATTGCAGTGCACACGTGGTATGCATGTCCGGCATTGATCAAGTCCATCTGGGCTATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CCA 72 bp GACATCGGCGGCCCTCCGTCATCTGATAGACGGCCCTaGAGATGCACCATGGTTTTAGCAGCAGCTGCAGAA +
Preference number: 6 (lower is better)
Translates to: DIGGPPSSDRRP*RCTMVLAAAAE
Trigger: TTCTGCAGCTGCTGCTAAAACCATGGTGCATCTCCAGGGCCGTCTATCAGATGACGGAGGGCCGCCGATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS CCA 72 bp ACAGCCGAGTCTGACCATGAGGCACCAGGCAGTCACTaGAGATCAGCAAATGCCCTTACCATCCCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: TAESDHEAPGSH*RSANALTIPEE
Trigger: CTCCTCGGGGATGGTAAGGGCATTTGCTGATCTCCAGTGACTGCCTGGTGCCTCATGGTCAGACTCGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TTCTCCGCCTTCGGTCGGCCTTTGTTGGTTTGGTCGTaGCAGTCCCCAGCTTGGCAGACTTTTCCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: FSAFGRPLLVWS*QSPAWQTFPFQ
Trigger: CTGGAAGGGAAAAGTCTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGACCGAAGGCGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS CAA 72 bp TCCTCCCCTGGATCCAGGGGATATTCTACTGGCAGCTaGCCCGTGAGCTCAGCTTCTCGGAGACACAGCTTC +
Preference number: 6 (lower is better)
Translates to: SSPGSRGYSTGS*PVSSASRRHSF
Trigger: GAAGCTGTGTCTCCGAGAAGCTGAGCTCACGGGCAAGCTGCCAGTAGAATATCCCCTGGATCCAGGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CAA 72 bp TCGGCCTTTGTTGGTTTGGTCGTGGCAGTCCCCAGCTaGGCAGACTTTTCCCTTCCAGGAGAGGGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: SAFVGLVVAVPS*ADFSLPGEGGE
Trigger: CTCTCCTCCCTCTCCTGGAAGGGAAAAGTCTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS TCA 72 bp CGCTTGAACCCGGGAAGCAGAGATTGGAGATTGCAGTaGTCCAAGATGGCACCATTGCCCTCCAGCCTGCAC +
Preference number: 6 (lower is better)
Translates to: RLNPGSRDWRLQ*SKMAPLPSSLH
Trigger: GTGCAGGCTGGAGGGCAATGGTGCCATCTTGGATCACTGCAATCTCCAATCTCTGCTTCCCGGGTTCAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493380.5
CDS TCA 72 bp TTGTTCAGAAGACCCTGGGCGACTCAGCACCGGATATaGGCGCACATTCTGCCAGGAGGACGTTGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: LFRRPWATQHRI*AHILPGGRCQE
Trigger: CTCCTGACAACGTCCTCCTGGCAGAATGTGCGCTCATATCCGGTGCTGAGTCGCCCAGGGTCTTCTGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS TCA 72 bp TTACTCTCTCTGTGTGCCGTGCTTAAGCATCCCACATaGAAAGAGCCATGTCGGGAGCCGTGGTGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: LLSLCAVLKHPT*KEPCREPWWLP
Trigger: GGGGAGCCACCACGGCTCCCGACATGGCTCTTTTCATGTGGGATGCTTAAGCACGGCACACAGAGAGAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS TCA 72 bp AGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATCCTGAGAGCCCGG +
Preference number: 6 (lower is better)
Translates to: RSSSFLSSRRCT*HRRPSVILRAR
Trigger: CCGGGCTCTCAGGATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648400.1
CDS GCA 72 bp CGGCGGCCCTCCGTCATAAACACATCCATGAGCAGGTaGTCCAGTGTCAGCTCAAAGTCTTCCAGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: RRPSVINTSMSR*SSVSSKSSSLA
Trigger: TGCCAAGCTGGAAGACTTTGAGCTGACACTGGAGCACCTGCTCATGGATGTGTTTATGACGGAGGGCCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649947.1
CDS CCA 72 bp AGGGAAGACCTCAGACCCAGAAGCACCACCGAGTGTTaGGATCCCCTCCAGGGTGAGAAAGCTAAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: REDLRPRSTTEC*DPLQGEKAKSR
Trigger: TCTGCTCTTAGCTTTCTCACCCTGGAGGGGATCCCAACACTCGGTGGTGCTTCTGGGTCTGAGGTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS CCA 72 bp CCTGCCTGGACTTCAAGGCAGCCAGCATGTCCTTCTTaGCCGACTGCGAGCTATCTGATTCCTGAGAACCTG +
Preference number: 6 (lower is better)
Translates to: PAWTSRQPACPS*PTASYLIPENL
Trigger: CAGGTTCTCAGGAATCAGATAGCTCGCAGTCGGCCAAGAAGGACATGCTGGCTGCCTTGAAGTCCAGGCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 72 bp TTCAAGTTCTCCGCCTTCGGTCGGCCTTTGTTGGTTTaGTCGTGGCAGTCCCCAGCTTGGCAGACTTTTCCC +
Preference number: 6 (lower is better)
Translates to: FKFSAFGRPLLV*SWQSPAWQTFP
Trigger: GGGAAAAGTCTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGACCGAAGGCGGAGAACTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS CAA 72 bp TGTGCACTGCAATGCCGCTGTGCCCAAACGTCCTCCTaGTCACTGAAGCCCTGCGTGGGTCATGAACTTCCA +
Preference number: 6 (lower is better)
Translates to: CALQCRCAQTSS*SLKPCVGHELP
Trigger: TGGAAGTTCATGACCCACGCAGGGCTTCAGTGACAAGGAGGACGTTTGGGCACAGCGGCATTGCAGTGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CAA 72 bp GCACCGGATATGAGCGCACATTCTGCCAGGAGGACGTaGTCAGGAGCCACGCGTGGCTCATCTGTTTTTGAC +
Preference number: 6 (lower is better)
Translates to: APDMSAHSARRT*SGATRGSSVFD
Trigger: GTCAAAAACAGATGAGCCACGCGTGGCTCCTGACAACGTCCTCCTGGCAGAATGTGCGCTCATATCCGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS TCA 72 bp AGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATCATCAGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: RSSSFLSSRRCT*HRRPSVIISRP
Trigger: CGGCCTGCTGATGATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 72 bp AGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATCGCTGACAGCACG +
Preference number: 6 (lower is better)
Translates to: RSSSFLSSRRCT*HRRPSVIADST
Trigger: CGTGCTGTCAGCGATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649155.1
CDS GCA 72 bp ACGGCCCTGGAGATGCACCATGGTTTTAGCAGCAGCTaGAGAACTCGAATGTTCCTCACTTGGCAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: TALEMHHGFSSS*RTRMFLTWQVL
Trigger: GAGGACCTGCCAAGTGAGGAACATTCGAGTTCTGCAGCTGCTGCTAAAACCATGGTGCATCTCCAGGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS GCA 72 bp TCAATGCCGGACATGCATACCACGTGTGCACTGCAATaGCGCTGTGCCCAAACGTCCTCCTTGTCACTGAAG +
Preference number: 6 (lower is better)
Translates to: SMPDMHTTCALQ*RCAQTSSLSLK
Trigger: CTTCAGTGACAAGGAGGACGTTTGGGCACAGCGGCATTGCAGTGCACACGTGGTATGCATGTCCGGCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS GCA 72 bp CTTGATCAATGCCGGACATGCATACCACGTGTGCACTaGAATGCCGCTGTGCCCAAACGTCCTCCTTGTCAC +
Preference number: 6 (lower is better)
Translates to: LDQCRTCIPRVH*NAAVPKRPPCH
Trigger: GTGACAAGGAGGACGTTTGGGCACAGCGGCATTGCAGTGCACACGTGGTATGCATGTCCGGCATTGATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS GCA 72 bp AGCCTCTTTCAGCCTCATTCAGCCGCGAGCCAGAAATaGTCCAATTGTTCAGAAGACCCTGGGCGACTCAGC +
Preference number: 6 (lower is better)
Translates to: SLFQPHSAASQK*SNCSEDPGRLS
Trigger: GCTGAGTCGCCCAGGGTCTTCTGAACAATTGGAGCATTTCTGGCTCGCGGCTGAATGAGGCTGAAAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CCA 72 bp CGGGTGGCTACAGAGCATCCAAAAGCACCTGGGAACTaGATGGAAACACAGATTCTGGGGCCCATCCCAAAG +
Preference number: 6 (lower is better)
Translates to: RVATEHPKAPGN*METQILGPIPK
Trigger: CTTTGGGATGGGCCCCAGAATCTGTGTTTCCATCCAGTTCCCAGGTGCTTTTGGATGCTCTGTAGCCACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 72 bp CCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATGGTaGCAGAATCCTCATGCCAGTTTCTGTCTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: PSSSSETGALPW*QNPHASFCLLQ
Trigger: TTGCAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648761.1
CDS CCA 72 bp AACCCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATaGTGGCAGAATCCTCATGCCAGTTTCTGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: NPSSSSETGALP*WQNPHASFCLL
Trigger: CAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648761.1
CDS CAA 72 bp TTTCAAGTTCTCCGCCTTCGGTCGGCCTTTGTTGGTTaGGTCGTGGCAGTCCCCAGCTTGGCAGACTTTTCC +
Preference number: 6 (lower is better)
Translates to: FQVLRLRSAFVG*VVAVPSLADFS
Trigger: GGAAAAGTCTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGACCGAAGGCGGAGAACTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS CAA 72 bp GTTCTTTTCAAGTTCTCCGCCTTCGGTCGGCCTTTGTaGGTTTGGTCGTGGCAGTCCCCAGCTTGGCAGACT +
Preference number: 6 (lower is better)
Translates to: VLFKFSAFGRPL*VWSWQSPAWQT
Trigger: AGTCTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGACCGAAGGCGGAGAACTTGAAAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS CAA 72 bp CAAGTTCTTTTCAAGTTCTCCGCCTTCGGTCGGCCTTaGTTGGTTTGGTCGTGGCAGTCCCCAGCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: QVLFKFSAFGRP*LVWSWQSPAWQ
Trigger: CTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGACCGAAGGCGGAGAACTTGAAAAGAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS CAA 72 bp ACAGAGACCGTAGTCTGTGCCTCCTCCGCCTCTTGCTaGACACACACACACACATACACACACACACGCAGC +
Preference number: 6 (lower is better)
Translates to: TETVVCASSASC*THTHTYTHTRS
Trigger: GCTGCGTGTGTGTGTGTATGTGTGTGTGTGTGTCAAGCAAGAGGCGGAGGAGGCACAGACTACGGTCTCTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CAA 72 bp TCCTCTGTCCCTCCCAACATCAAAAGACAAAATGACTaGGCCAAGGCTGGCGGAAGCGGACGACGGAACCAG +
Preference number: 6 (lower is better)
Translates to: SSVPPNIKRQND*AKAGGSGRRNQ
Trigger: CTGGTTCCGTCGTCCGCTTCCGCCAGCCTTGGCCAAGTCATTTTGTCTTTTGATGTTGGGAGGGACAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CAA 72 bp TCAGCCTCATTCAGCCGCGAGCCAGAAATGCTCCAATaGTTCAGAAGACCCTGGGCGACTCAGCACCGGATA +
Preference number: 6 (lower is better)
Translates to: SASFSREPEMLQ*FRRPWATQHRI
Trigger: TATCCGGTGCTGAGTCGCCCAGGGTCTTCTGAACAATTGGAGCATTTCTGGCTCGCGGCTGAATGAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CAA 90 bp CCTTGGAACTCCTCTGTCCCTCCCAACATCAAAAGACAAAATGACTaGGCCAAGGCTGGCGGAAGCGGACGACGGAACCAGATCTCTGAC +
Preference number: 6 (lower is better)
Translates to: PWNSSVPPNIKRQND*AKAGGSGRRNQISD
Trigger: GTCAGAGATCTGGTTCCGTCGTCCGCTTCCGCCAGCCTTGGCCAAGTCATTTTGTCTTTTGATGTTGGGAGGGACAGAGGAGTTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS TCA 72 bp AGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATGGATGCAGAGGTG +
Preference number: 6 (lower is better)
Translates to: RSSSFLSSRRCT*HRRPSVMDAEV
Trigger: CACCTCTGCATCCATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649246.1
CDS GCA 72 bp ATCCCCTCCAGGGTGAGAAAGCTAAGAGCAGAGAGCTaGAGCCTTCCCTGCAACATTCCCCAGACATTCCAT +
Preference number: 6 (lower is better)
Translates to: IPSRVRKLRAES*SLPCNIPQTFH
Trigger: ATGGAATGTCTGGGGAATGTTGCAGGGAAGGCTGCAGCTCTCTGCTCTTAGCTTTCTCACCCTGGAGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS GCA 72 bp ATGGACTTGATCAATGCCGGACATGCATACCACGTGTaGACTGCAATGCCGCTGTGCCCAAACGTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: MDLINAGHAYHV*TAMPLCPNVLL
Trigger: AAGGAGGACGTTTGGGCACAGCGGCATTGCAGTGCACACGTGGTATGCATGTCCGGCATTGATCAAGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS GCA 72 bp CTCGGTCAGGTCGATGGCGATCTCACTCAGGCTGCGTaGTGCATGGATTTTGGACTTACTCTGCTTTCTGTC +
Preference number: 6 (lower is better)
Translates to: LGQVDGDLTQAA*CMDFGLTLLSV
Trigger: GACAGAAAGCAGAGTAAGTCCAAAATCCATGCAGCACGCAGCCTGAGTGAGATCGCCATCGACCTGACCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS GCA 72 bp CGATGCTATGAACATTGTTTGAGACCCTGGAGACACTaGCTGTGTCACTGTGGGTTTCCCAGCTTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: RCYEHCLRPWRH*LCHCGFPSFQP
Trigger: CGGCTGGAAGCTGGGAAACCCACAGTGACACAGGCAGTGTCTCCAGGGTCTCAAACAATGTTCATAGCATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CCA 72 bp TTTAGCAGCAGCTGCAGAACTCGAATGTTCCTCACTTaGCAGGTCCTCAGCGCCCGACAAGTCAGGTTCCAA +
Preference number: 6 (lower is better)
Translates to: FSSSCRTRMFLT*QVLSARQVRFQ
Trigger: TTGGAACCTGACTTGTCGGGCGCTGAGGACCTGCCAAGTGAGGAACATTCGAGTTCTGCAGCTGCTGCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS CCA 72 bp TCCTATTCTTCTCCGAACAATGGGTGGTTCCTCCCCTaGATCCAGGGGATATTCTACTGGCAGCTTGCCCGT +
Preference number: 6 (lower is better)
Translates to: SYSSPNNGWFLP*IQGIFYWQLAR
Trigger: ACGGGCAAGCTGCCAGTAGAATATCCCCTGGATCCAGGGGAGGAACCACCCATTGTTCGGAGAAGAATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 72 bp GGGATCTATTCGGAGCCACTGCAGCCTGAACCACCATaGTGTACAGCTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 6 (lower is better)
Translates to: GIYSEPLQPEPP*CTAVCVCVCVC
Trigger: ACACACACACACACACACACACACAGCTGTACACCATGGTGGTTCAGGCTGCAGTGGCTCCGAATAGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS CCA 72 bp CATCAATGTCCCACCTCCATAGATCACAGCTTCACGTaGATGGGGAGACCCCACAATCATGGCAGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: HQCPTSIDHSFT*MGRPHNHGSRQ
Trigger: TTGCCTGCTGCCATGATTGTGGGGTCTCCCCATCCACGTGAAGCTGTGATCTATGGAGGTGGGACATTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 72 bp TTCTTTTCAAGTTCTCCGCCTTCGGTCGGCCTTTGTTaGTTTGGTCGTGGCAGTCCCCAGCTTGGCAGACTT +
Preference number: 6 (lower is better)
Translates to: FFSSSPPSVGLC*FGRGSPQLGRL
Trigger: AAGTCTGCCAAGCTGGGGACTGCCACGACCAAACCAACAAAGGCCGACCGAAGGCGGAGAACTTGAAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477221.2
ENST00000492155.5
ENST00000632570.1
CDS CCA 72 bp CTAATGTGTAAGAGCCTTGCAAAGGGCGGAGGAGGCTaGGACCTTATTTCGGGGGCAGGCAACTCAAGATCA +
Preference number: 6 (lower is better)
Translates to: LMCKSLAKGGGG*DLISGAGNSRS
Trigger: TGATCTTGAGTTGCCTGCCCCCGAAATAAGGTCCCAGCCTCCTCCGCCCTTTGCAAGGCTCTTACACATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CCA 72 bp TCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATGGTaGCAGAATCCTCATGCCAGTTTCTGTCTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: SSSSSETGALPW*QNPHASFCLLQ
Trigger: TTGCAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649423.1
CDS CCA 72 bp TCATCTTCGTCCTCATCGGAGACAGGAGCCCTTCCATaGTGGCAGAATCCTCATGCCAGTTTCTGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: SSSSSSETGALP*WQNPHASFCLL
Trigger: CAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATGGAAGGGCTCCTGTCTCCGATGAGGACGAAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649423.1
CDS CAA 72 bp ACAAGTGGGCACATGAGCGGATTCCACTTTTCACCCTaGGACCTGACATTCCCGACAGCTTGCCATGGGGAT +
Preference number: 6 (lower is better)
Translates to: TSGHMSGFHFSP*DLTFPTACHGD
Trigger: ATCCCCATGGCAAGCTGTCGGGAATGTCAGGTCCAAGGGTGAAAAGTGGAATCCGCTCATGTGCCCACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS TCA 72 bp AGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATCCTTTCAACGCTG +
Preference number: 6 (lower is better)
Translates to: RSSSFLSSRRCT*HRRPSVILSTL
Trigger: CAGCGTTGAAAGGATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS TCA 72 bp AGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATCTTCGTCCTCATC +
Preference number: 6 (lower is better)
Translates to: RSSSFLSSRRCT*HRRPSVIFVLI
Trigger: GATGAGGACGAAGATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649423.1
CDS GCA 72 bp AGATCCCTTTGTAGCTCAGGCCCAGCCACCATGGTATaGCCTGCTTGTCCTTCACTGCATAATAGTGAACCC +
Preference number: 6 (lower is better)
Translates to: RSLCSSGPATMV*PACPSLHNSEP
Trigger: GGGTTCACTATTATGCAGTGAAGGACAAGCAGGGCATACCATGGTGGCTGGGCCTGAGCTACAAAGGGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
CDS GCA 72 bp TTGGCTTATGGCCATAGCCCAGATGGACTTGATCAATaGCGGACATGCATACCACGTGTGCACTGCAATGCC +
Preference number: 6 (lower is better)
Translates to: LAYGHSPDGLDQ*RTCIPRVHCNA
Trigger: GGCATTGCAGTGCACACGTGGTATGCATGTCCGGCATTGATCAAGTCCATCTGGGCTATGGCCATAAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS GCA 72 bp GGCCCATCCCAAAGGGTTAATATGGCGGCACTCAGCTaGTATCCAGGACTTTTTCCTGTTCGTGGAGTCTTG +
Preference number: 6 (lower is better)
Translates to: GPSQRVNMAALS*YPGLFPVRGVL
Trigger: CAAGACTCCACGAACAGGAAAAAGTCCTGGATAGCAGCTGAGTGCCGCCATATTAACCCTTTGGGATGGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS GCA 72 bp TTCAAATTCCCAGCCTCCCATCGGGACTCCACTTCCTaGTCACTAATGTGTAAGAGCCTTGCAAAGGGCGGA +
Preference number: 6 (lower is better)
Translates to: FKFPASHRDSTS*SLMCKSLAKGG
Trigger: TCCGCCCTTTGCAAGGCTCTTACACATTAGTGAGCAGGAAGTGGAGTCCCGATGGGAGGCTGGGAATTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS GCA 72 bp CCTCCCTCTCTCTCCTCCCTCTCTCTTTCCATAATCTaGCTACAGCTCTCTGTGTACCCTGCTCACTTGACA +
Preference number: 6 (lower is better)
Translates to: PPSLSSLSLSII*LQLSVYPAHLT
Trigger: TGTCAAGTGAGCAGGGTACACAGAGAGCTGTAGGCAGATTATGGAAAGAGAGAGGGAGGAGAGAGAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648761.1
CDS CCA 72 bp CTGGAAGATCCCTTTGTAGCTCAGGCCCAGCCACCATaGTATGCCCTGCTTGTCCTTCACTGCATAATAGTG +
Preference number: 6 (lower is better)
Translates to: LEDPFVAQAQPP*YALLVLHCIIV
Trigger: CACTATTATGCAGTGAAGGACAAGCAGGGCATACCATGGTGGCTGGGCCTGAGCTACAAAGGGATCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
CDS CCA 72 bp CAAAAGCACCTGGGAACTGGATGGAAACACAGATTCTaGGGCCCATCCCAAAGGGTTAATATGGCGGCACTC +
Preference number: 6 (lower is better)
Translates to: QKHLGTGWKHRF*GPSQRVNMAAL
Trigger: GAGTGCCGCCATATTAACCCTTTGGGATGGGCCCCAGAATCTGTGTTTCCATCCAGTTCCCAGGTGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CCA 72 bp TGGCTACAGAGCATCCAAAAGCACCTGGGAACTGGATaGAAACACAGATTCTGGGGCCCATCCCAAAGGGTT +
Preference number: 6 (lower is better)
Translates to: WLQSIQKHLGTG*KHRFWGPSQRV
Trigger: AACCCTTTGGGATGGGCCCCAGAATCTGTGTTTCCATCCAGTTCCCAGGTGCTTTTGGATGCTCTGTAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CAA 90 bp AGCTCAGCTCCCGGTAGGGCTAACATACTTAAGAGGAACATGGAATaGCACTGCCTGTTCTGTGAGCGTTCTGATCTCCCTGGCTGTACC +
Preference number: 6 (lower is better)
Translates to: SSAPGRANILKRNME*HCLFCERSDLPGCT
Trigger: GGTACAGCCAGGGAGATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCTACCGGGAGCTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CAA 90 bp TCACAACACACAAGTGGGCACATGAGCGGATTCCACTTTTCACCCTaGGACCTGACATTCCCGACAGCTTGCCATGGGGATTGTGAAACG +
Preference number: 6 (lower is better)
Translates to: SQHTSGHMSGFHFSP*DLTFPTACHGDCET
Trigger: CGTTTCACAATCCCCATGGCAAGCTGTCGGGAATGTCAGGTCCAAGGGTGAAAAGTGGAATCCGCTCATGTGCCCACTTGTGTGTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CAA 90 bp AAAGTCTTCCAGCTTGGCAGCCAAAGTCATGATGAATGTCCCGATTaGCTCTCAGTCCCCGCTGACAGATCAGATCTGCAAACTCCCCAG +
Preference number: 6 (lower is better)
Translates to: KVFQLGSQSHDECPD*LSVPADRSDLQTPQ
Trigger: CTGGGGAGTTTGCAGATCTGATCTGTCAGCGGGGACTGAGAGCAAATCGGGACATTCATCATGACTTTGGCTGCCAAGCTGGAAGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649947.1
CDS CAA 90 bp ACATCCATGAGCAGGTGCTCCAGTGTCAGCTCAAAGTCTTCCAGCTaGGCAGCCAAAGTCATGATGAATGTCCCGATTTGCTCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: TSMSRCSSVSSKSSS*AAKVMMNVPICSQS
Trigger: GGACTGAGAGCAAATCGGGACATTCATCATGACTTTGGCTGCCAAGCTGGAAGACTTTGAGCTGACACTGGAGCACCTGCTCATGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649947.1
CDS TCA 72 bp TGTGGCTGCTGGAATGGCTGTGAGAGGAGCGCTTCTTaGCCTTCTCATAGGGTTCATCTAAAGAGGACTCAC +
Preference number: 6 (lower is better)
Translates to: CGCWNGCERSAS*PSHRVHLKRTH
Trigger: GTGAGTCCTCTTTAGATGAACCCTATGAGAAGGTCAAGAAGCGCTCCTCTCACAGCCATTCCAGCAGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 72 bp CAAGGCTGGCGGAAGCGGACGACGGAACCAGATCTCTaGCTCGCAATTTCAAAAGGCACTGAATGGAGAAAT +
Preference number: 6 (lower is better)
Translates to: QGWRKRTTEPDL*LAISKGTEWRN
Trigger: ATTTCTCCATTCAGTGCCTTTTGAAATTGCGAGTCAGAGATCTGGTTCCGTCGTCCGCTTCCGCCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS TCA 72 bp GACGTTGTCAGGAGCCACGCGTGGCTCATCTGTTTTTaGCACAGAGGGGATATTGATGACCAGCCACTGATT +
Preference number: 6 (lower is better)
Translates to: DVVRSHAWLICF*HRGDIDDQPLI
Trigger: AATCAGTGGCTGGTCATCAATATCCCCTCTGTGTCAAAAACAGATGAGCCACGCGTGGCTCCTGACAACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS GCA 72 bp TGGCAGTTTCCTTATCAAAACAGAGACCGTAGTCTGTaGCTCCTCCGCCTCTTGCTTGACACACACACACAC +
Preference number: 6 (lower is better)
Translates to: WQFPYQNRDRSL*LLRLLLDTHTH
Trigger: GTGTGTGTGTGTGTCAAGCAAGAGGCGGAGGAGGCACAGACTACGGTCTCTGTTTTGATAAGGAAACTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CCA 72 bp ACCTTCCCCAGATCTACTTTTCCTCTCCAAGTAGACTaGCCAGCTCAGCTCCCGGTAGGGCTAACATACTTA +
Preference number: 6 (lower is better)
Translates to: TFPRSTFPLQVD*PAQLPVGLTYL
Trigger: TAAGTATGTTAGCCCTACCGGGAGCTGAGCTGGCCAGTCTACTTGGAGAGGAAAAGTAGATCTGGGGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp GCAATGTTTCCATCGTCTATGATCAGCGAAGCCCTCTaGGTGGGTTTCTTCCCAGACTTGATGCGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: AMFPSSMISEAL*VGFFPDLMRFS
Trigger: TGAGAACCGCATCAAGTCTGGGAAGAAACCCACCCAGAGGGCTTCGCTGATCATAGACGATGGAAACATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TACTTTGGTGAGGTGGAGACTCAGACCCATCCAGAATaGGTGAGTTTTCTGTTGCTTCTCCAGTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: YFGEVETQTHPE*VSFLLLLQSAR
Trigger: CCTGGCAGACTGGAGAAGCAACAGAAAACTCACCCATTCTGGATGGGTCTGAGTCTCCACCTCACCAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp AACACAGATTCTGGGGCCCATCCCAAAGGGTTAATATaGCGGCACTCAGCTGCTATCCAGGACTTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: NTDSGAHPKGLI*RHSAAIQDFFL
Trigger: CAGGAAAAAGTCCTGGATAGCAGCTGAGTGCCGCCATATTAACCCTTTGGGATGGGCCCCAGAATCTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CAA 72 bp AACTGGTGTTGGCTTATGGCCATAGCCCAGATGGACTaGATCAATGCCGGACATGCATACCACGTGTGCACT +
Preference number: 6 (lower is better)
Translates to: NWCWLMAIAQMD*INAGHAYHVCT
Trigger: AGTGCACACGTGGTATGCATGTCCGGCATTGATCAAGTCCATCTGGGCTATGGCCATAAGCCAACACCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000477221.2
ENST00000492155.5
ENST00000632314.1
ENST00000632570.1
CDS CAA 72 bp AGCTGCTATCCAGGACTTTTTCCTGTTCGTGGAGTCTaGGAAGAACACTCCTCTAGGGCTGGGGTTTCCAAG +
Preference number: 6 (lower is better)
Translates to: SCYPGLFPVRGV*EEHSSRAGVSK
Trigger: CTTGGAAACCCCAGCCCTAGAGGAGTGTTCTTCCAAGACTCCACGAACAGGAAAAAGTCCTGGATAGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS CAA 72 bp CAGCTTGGCAGCCAAAGTCATGATGAATGTCCCGATTaGCTCTCAGTCCCCGCTGACAGATCAGATCTGCAA +
Preference number: 6 (lower is better)
Translates to: QLGSQSHDECPD*LSVPADRSDLQ
Trigger: TTGCAGATCTGATCTGTCAGCGGGGACTGAGAGCAAATCGGGACATTCATCATGACTTTGGCTGCCAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649947.1
CDS CAA 72 bp AGCAGGTGCTCCAGTGTCAGCTCAAAGTCTTCCAGCTaGGCAGCCAAAGTCATGATGAATGTCCCGATTTGC +
Preference number: 6 (lower is better)
Translates to: SRCSSVSSKSSS*AAKVMMNVPIC
Trigger: GCAAATCGGGACATTCATCATGACTTTGGCTGCCAAGCTGGAAGACTTTGAGCTGACACTGGAGCACCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649947.1
CDS TCA 72 bp AGGAGTTCCAGCTTCCTGTCATCAAGAAGATGTACTTaGCATCGGCGGCCCTCCGTCATAAACACATCCATG +
Preference number: 6 (lower is better)
Translates to: RSSSFLSSRRCT*HRRPSVINTSM
Trigger: CATGGATGTGTTTATGACGGAGGGCCGCCGATGTCAAGTACATCTTCTTGATGACAGGAAGCTGGAACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649947.1
CDS GCA 72 bp CCGGTAGGGCTAACATACTTAAGAGGAACATGGAATTaGACTGCCTGTTCTGTGAGCGTTCTGATCTCCCTG +
Preference number: 6 (lower is better)
Translates to: PVGLTYLRGTWN*TACSVSVLISL
Trigger: CAGGGAGATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCTACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS GCA 72 bp TCACGGGTTGGTGAACACAGCAGTATCTTCTTTCGCTaGCTGAGATTCTTGCAAAGATGGGAGAGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: SRVGEHSSIFFR*LRFLQRWERQL
Trigger: AAGCTGCCTCTCCCATCTTTGCAAGAATCTCAGGCAGCGAAAGAAGATACTGCTGTGTTCACCAACCCGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS GCA 72 bp CATGGTGGCAGAATCCTCATGCCAGTTTCTGTCTCCTaGAAGTTACTCTCTCTGTGTGCCGTGCTTAAGCAT +
Preference number: 6 (lower is better)
Translates to: HGGRILMPVSVS*KLLSLCAVLKH
Trigger: ATGCTTAAGCACGGCACACAGAGAGAGTAACTTGCAGGAGACAGAAACTGGCATGAGGATTCTGCCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649423.1
CDS GCA 72 bp AGCTTGGCAGCCAAAGTCATGATGAATGTCCCGATTTaGTCTCAGTCCCCGCTGACAGATCAGATCTGCAAA +
Preference number: 6 (lower is better)
Translates to: SLAAKVMMNVPI*SQSPLTDQICK
Trigger: TTTGCAGATCTGATCTGTCAGCGGGGACTGAGAGCAAATCGGGACATTCATCATGACTTTGGCTGCCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648761.1
ENST00000649947.1
CDS CCA 72 bp ACATCCCTGTTTCTCAGTGGACTGAGGCTGGCTCTTTaGCAGATCAAACAGAACTTAGGGAAGACCTCAGAC +
Preference number: 6 (lower is better)
Translates to: TSLFLSGLRLAL*QIKQNLGKTSD
Trigger: GTCTGAGGTCTTCCCTAAGTTCTGTTTGATCTGCCAAAGAGCCAGCCTCAGTCCACTGAGAAACAGGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264546.10
CDS CCA 72 bp TTTGAAGGCTGTTCCTATTCTTCTCCGAACAATGGGTaGTTCCTCCCCTGGATCCAGGGGATATTCTACTGG +
Preference number: 6 (lower is better)
Translates to: FEGCSYSSPNNG*FLPWIQGIFYW
Trigger: CCAGTAGAATATCCCCTGGATCCAGGGGAGGAACCACCCATTGTTCGGAGAAGAATAGGAACAGCCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 72 bp CAGCTCCCGGTAGGGCTAACATACTTAAGAGGAACATaGAATTGCACTGCCTGTTCTGTGAGCGTTCTGATC +
Preference number: 6 (lower is better)
Translates to: QLPVGLTYLRGT*NCTACSVSVLI
Trigger: GATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCTACCGGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CCA 72 bp TCCTGGCACCAGATCCTGAAATTCACAACACACAAGTaGGCACATGAGCGGATTCCACTTTTCACCCTTGGA +
Preference number: 6 (lower is better)
Translates to: SWHQILKFTTHK*AHERIPLFTLG
Trigger: TCCAAGGGTGAAAAGTGGAATCCGCTCATGTGCCCACTTGTGTGTTGTGAATTTCAGGATCTGGTGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CAA 72 bp CCCGGTAGGGCTAACATACTTAAGAGGAACATGGAATaGCACTGCCTGTTCTGTGAGCGTTCTGATCTCCCT +
Preference number: 6 (lower is better)
Translates to: PGRANILKRNME*HCLFCERSDLP
Trigger: AGGGAGATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCTACCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS CAA 90 bp AGCTCAGCTTCCTCTCCTTTGGGCAGGATTTTCTGTTCATCCAGTTaGAAGGCTGTTCCTATTCTTCTCCGAACAATGGGTGGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSASSPLGRIFCSSS*KAVPILLRTMGGSS
Trigger: GGAGGAACCACCCATTGTTCGGAGAAGAATAGGAACAGCCTTCAAACTGGATGAACAGAAAATCCTGCCCAAAGGAGAGGAAGCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS TCA 72 bp AACCTGAGAGTCTTCATCCTCAAGAACAAGGGCATCTaGGAGGGAGCTGTCTTCACTGGCAATGTTTCCATC +
Preference number: 6 (lower is better)
Translates to: NLRVFILKNKGI*EGAVFTGNVSI
Trigger: GATGGAAACATTGCCAGTGAAGACAGCTCCCTCTCAGATGCCCTTGTTCTTGAGGATGAAGACTCTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 72 bp GGGTTGGTGAACACAGCAGTATCTTCTTTCGCTGCCTaGGATTCTTGCAAAGATGGGAGAGGCAGCTTTTCA +
Preference number: 6 (lower is better)
Translates to: GLVNTAVSSFAA*DSCKDGRGSFS
Trigger: TGAAAAGCTGCCTCTCCCATCTTTGCAAGAATCTCAGGCAGCGAAAGAAGATACTGCTGTGTTCACCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS GCA 72 bp AGGGCTAACATACTTAAGAGGAACATGGAATTGCACTaGCTGTTCTGTGAGCGTTCTGATCTCCCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: RANILKRNMELH*LFCERSDLPGC
Trigger: ACAGCCAGGGAGATCAGAACGCTCACAGAACAGGCAGTGCAATTCCATGTTCCTCTTAAGTATGTTAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 72 bp CCTCTCCTTTGGGCAGGATTTTCTGTTCATCCAGTTTaGAGGCTGTTCCTATTCTTCTCCGAACAATGGGTG +
Preference number: 6 (lower is better)
Translates to: PLLWAGFSVHPV*RLFLFFSEQWV
Trigger: CACCCATTGTTCGGAGAAGAATAGGAACAGCCTTCAAACTGGATGAACAGAAAATCCTGCCCAAAGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS TCA 72 bp TGTCCTCTCTCTGGTCCTTTAAATTTCTCCTGGCTATaGTTGGATCACACCAGCCCACAAGCTAACGAGACA +
Preference number: 6 (lower is better)
Translates to: CPLSGPLNFSWL*LDHTSPQANET
Trigger: TGTCTCGTTAGCTTGTGGGCTGGTGTGATCCAATCATAGCCAGGAGAAATTTAAAGGACCAGAGAGAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS CCA 72 bp TTTGATTCCTGGGAGCAGTTTTCTCAGATTCGCATTTaGATCCCAACCTTGGTCTGGAAAGCAAAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: FDSWEQFSQIRI*IPTLVWKAKPA
Trigger: AGCTGGCTTTGCTTTCCAGACCAAGGTTGGGATCCAAATGCGAATCTGAGAAAACTGCTCCCAGGAATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000492155.5
CDS CAA 72 bp ACAGCTATCATTGTAGCTCCTCTATTCATCAGTACTTaGGTGAGGTGGAGACTCAGACCCATCCAGAATGGG +
Preference number: 6 (lower is better)
Translates to: TAIIVAPLFIST*VRWRLRPIQNG
Trigger: CCCATTCTGGATGGGTCTGAGTCTCCACCTCACCAAAGTACTGATGAATAGAGGAGCTACAATGATAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357447.7
CDS TCA 72 bp CATTTGGAAATCTTTGGAGTGAACTTCCCGATGCTATaGACATTGTTTGAGACCCTGGAGACACTGCCTGTG +
Preference number: 6 (lower is better)
Translates to: HLEIFGVNFPML*TLFETLETLPV
Trigger: CACAGGCAGTGTCTCCAGGGTCTCAAACAATGTTCATAGCATCGGGAAGTTCACTCCAAAGATTTCCAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000632314.1
CDS CAA 72 bp TCCTCTCCTTTGGGCAGGATTTTCTGTTCATCCAGTTaGAAGGCTGTTCCTATTCTTCTCCGAACAATGGGT +
Preference number: 6 (lower is better)
Translates to: SSPLGRIFCSSS*KAVPILLRTMG
Trigger: ACCCATTGTTCGGAGAAGAATAGGAACAGCCTTCAAACTGGATGAACAGAAAATCCTGCCCAAAGGAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264546.10
ENST00000357447.7
CDS CCA 72 bp ATAAATTACCAGGGAAGATTTCTTGCCTTCTTTGCGTaGCTCAGAGACAGCTGCATGGTTCCTACATCAATC +
Preference number: 6 (lower is better)
Translates to: INYQGRFLAFFA*LRDSCMVPTSI
Trigger: GATTGATGTAGGAACCATGCAGCTGTCTCTGAGCCACGCAAAGAAGGCAAGAAATCTTCCCTGGTAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS TCA 72 bp TTAGGGAAGTCATGTTCCAATACTCTTCGATCTAGCTaGAGCCAGTTTAAGTGTCCCGTTTCATCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: LGKSCSNTLRSS*SQFKCPVSSVN
Trigger: ATTCACAGATGAAACGGGACACTTAAACTGGCTTCAGCTAGATCGAAGAGTATTGGAACATGACTTCCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264546.10
ENST00000342409.3
ENST00000357447.7
ENST00000640906.1
CDS GCA 72 bp CAATTTCAAAAGGCACTGAATGGAGAAATCATGCCCTaGGACACGATGGAGAGAGTATTCCGCATTTTTAAA +
Preference number: 6 (lower is better)
Translates to: QFQKALNGEIMP*DTMERVFRIFK
Trigger: TTTAAAAATGCGGAATACTCTCTCCATCGTGTCGCAGGGCATGATTTCTCCATTCAGTGCCTTTTGAAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492155.5
CDS TCA 72 bp AGGTGTAGATCTCTCAAAGCTTTTCTTGAGAAATCCTaGAGCCAGTTATCGTCCTCAACTCTACATCAATGT +
Preference number: 6 (lower is better)
Translates to: RCRSLKAFLEKS*SQLSSSTLHQC
Trigger: ACATTGATGTAGAGTTGAGGACGATAACTGGCTTCAGGATTTCTCAAGAAAAGCTTTGAGAGATCTACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475141.2
CDS TCA 72 bp TATGGTCTCCTGGAGGGTTCCCAAATATCAAATAACTaGAAGAGTTTTTCTTTCGACCATCTGAGTCAAGAT +
Preference number: 6 (lower is better)
Translates to: YGLLEGSQISNN*KSFSFDHLSQD
Trigger: ATCTTGACTCAGATGGTCGAAAGAAAAACTCTTTCAGTTATTTGATATTTGGGAACCCTCCAGGAGACCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342409.3
ENST00000640906.1
CDS CAA 72 bp ATCTTTCCTCCCAGTTATCGGGAGGAAATGATCTACTaGAATGATACTAAAGATAGAATCTGTTGTTTTTGG +
Preference number: 6 (lower is better)
Translates to: IFPPSYREEMIY*NDTKDRICCFW
Trigger: CCAAAAACAACAGATTCTATCTTTAGTATCATTCAAGTAGATCATTTCCTCCCGATAACTGGGAGGAAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632314.1