RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FRMD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153303

Ensembl transcript IDs: ENST00000283309.10, ENST00000336070.11, ENST00000358587.5, ENST00000440994.6, ENST00000468647.5, ENST00000506415.1, ENST00000509157.5, ENST00000511714.2, ENST00000644440.1, ENST00000646385.1

Found 1850 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCGCAGCTGTTGCAGAGTGGGCCGCACGCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGCAGCAGGTGCCTGGACCGCCAGGTG +
Preference number: 1 (lower is better)
Translates to: CRSCCRVGRTRRWSW*LARSRCSRCLDRQV
Trigger: CACCTGGCGGTCCAGGCACCTGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGCGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp TCCTCCCGCTGCCGCAGCTGTTGCAGAGTGGGCCGCACGCGGAGGTaGAGCTGGTGGCTGGCGCGCAGCAGGTGCAGCAGGTGCCTGGAC +
Preference number: 1 (lower is better)
Translates to: SSRCRSCCRVGRTRR*SWWLARSRCSRCLD
Trigger: GTCCAGGCACCTGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGGGAGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp CCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGTCC +
Preference number: 1 (lower is better)
Translates to: PWLSAEWRERQWGQC*LLTPLPGKLLLARS
Trigger: GGACCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 90 bp GGAGCAGGGTCTGCCGCCTCCCACACCCCACCCAGCAGGGAGAGCTaGGCCCTCAGACCCAGACCCCCGCAGCAGCAATGCAGGTTCCGG +
Preference number: 1 (lower is better)
Translates to: GAGSAASHTPPSRES*ALRPRPPQQQCRFR
Trigger: CCGGAACCTGCATTGCTGCTGCGGGGGTCTGGGTCTGAGGGCGCAGCTCTCCCTGCTGGGTGGGGTGTGGGAGGCGGCAGACCCTGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp TGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCAGTGCTGGCTGCTaGCCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGTCCAGCTCCA +
Preference number: 1 (lower is better)
Translates to: CRRSGVRGSGGSAGC*PHCPGSSCWPGPAP
Trigger: TGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCACTCCGCCGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp CAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTaGGGTGGGCAGGGGCTGAGCCTGGCGGTGCGGACGGTACTGCTG +
Preference number: 1 (lower is better)
Translates to: QAASGGQEGTRAMWK*GGQGLSLAVRTVLL
Trigger: CAGCAGTACCGTCCGCACCGCCAGGCTCAGCCCCTGCCCACCCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp CCGGGCCACAGGACTGACCACCCCAGCCGGGCTCATGCGAGGCTGTaGTGCTGGAGGTCCTTGGCCTGCTCCTTGGGGGTCCACAGGGAC +
Preference number: 1 (lower is better)
Translates to: PGHRTDHPSRAHARL*CWRSLACSLGVHRD
Trigger: GTCCCTGTGGACCCCCAAGGAGCAGGCCAAGGACCTCCAGCATCACAGCCTCGCATGAGCCCGGCTGGGGTGGTCAGTCCTGTGGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp CCAGTGGGGCCAGAGAAGCTTCTCGGGTCAGCCAGGGGCCATGGCTaGCTCGCCTCTGCCAGGACACAAGGCGCCGGGCCAGCTTCACTG +
Preference number: 1 (lower is better)
Translates to: PVGPEKLLGSARGHG*LASARTQGAGPASL
Trigger: CAGTGAAGCTGGCCCGGCGCCTTGTGTCCTGGCAGAGGCGAGGCAGCCATGGCCCCTGGCTGACCCGAGAAGCTTCTCTGGCCCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp CTCCCCATCACAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTaGAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACTGCCAGC +
Preference number: 1 (lower is better)
Translates to: LPITARRRENGHGPG*RTGIAYHVQPPTAS
Trigger: GCTGGCAGTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTGTGATGGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp GGCTGTCACCACGTGTGCTGGGGTGGCTGCGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCA +
Preference number: 1 (lower is better)
Translates to: GCHHVCWGGCGWSWG*RTAPSHGARGPPRA
Trigger: TGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR TCA 90 bp CGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTaGCCTGGGTGCAGGGCTCCTGACGAGTGGCTTGGCTGTCACCAC +
Preference number: 1 (lower is better)
Translates to: REETGARPRRSGLWS*PGCRAPDEWLGCHH
Trigger: GTGGTGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR GCA 90 bp GAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTaGTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCCTGCCAGCCTGC +
Preference number: 1 (lower is better)
Translates to: EPLRTGPGRDSCWTS*WGEWPWSRRGLPAC
Trigger: GCAGGCTGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp TGGCTTGGCTGTCACCACGTGTGCTGGGGTGGCTGCGGCTGGTCCTaGGGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCA +
Preference number: 1 (lower is better)
Translates to: WLGCHHVCWGGCGWS*GWRTAPSHGARGPP
Trigger: TGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCCAAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp GGGTGGGCAGGGGCTGAGCCTGGCGGTGCGGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGA +
Preference number: 1 (lower is better)
Translates to: GWAGAEPGGADGTAG*VVPTPQTPVVEPLR
Trigger: TCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAGGCTCAGCCCCTGCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp CCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTaGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCAGCGG +
Preference number: 1 (lower is better)
Translates to: PRLGVSELVAHMGFM*PAWPSPLGQVSGQR
Trigger: CCGCTGCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp CTCTCTGGGTCGTTCTTGCGAGTCTGGACCTGCCAGCTTGACCGCTaGCCTGGCCCGGGCCACAGGACTGACCACCCCAGCCGGGCTCAT +
Preference number: 1 (lower is better)
Translates to: LSGSFLRVWTCQLDR*PGPGHRTDHPSRAH
Trigger: ATGAGCCCGGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGGTCCAGACTCGCAAGAACGACCCAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp ACCTTGGCACCTGGAAGGCAGCCTCCCCATCACAGCTCGCCGCCGTaGGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCA +
Preference number: 1 (lower is better)
Translates to: TLAPGRQPPHHSSPP*ERSWARLQDRHCLP
Trigger: TGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTGTGATGGGGAGGCTGCCTTCCAGGTGCCAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp AACCACCTCTCCTGTGAGATCCCAGACACACAGGCAGTTGCTGGCTaGCCCGGGCCTCCCAGATGGGCACCTGAGGACCCCGGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: NHLSCEIPDTQAVAG*PGPPRWAPEDPGLL
Trigger: GAGGAGGCCGGGGTCCTCAGGTGCCCATCTGGGAGGCCCGGGGCAGCCAGCAACTGCCTGTGTGTCTGGGATCTCACAGGAGAGGTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp GGGTGGCTGCGGCTGGTCCTGGGGCTGGAGGACGGCTCCTTCTCATaGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTG +
Preference number: 1 (lower is better)
Translates to: GWLRLVLGLEDGSFS*SPWTSKGTSTDISL
Trigger: CAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCCGCAGCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp CCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCTCGCAGGGGCCTGCCAGCCTGCAGT +
Preference number: 1 (lower is better)
Translates to: PLRTGPGRDSCWTSC*GEWPWSRRGLPACS
Trigger: ACTGCAGGCTGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp CCTGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCCTG +
Preference number: 1 (lower is better)
Translates to: PVVEPLRTGPGRDSC*TSCWGEWPWSRRGL
Trigger: CAGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp GGGCAGGGGCTGAGCCTGGCGGTGCGGACGGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGAACAG +
Preference number: 1 (lower is better)
Translates to: GQGLSLAVRTVLLGG*CLHHKLLWWSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAGGCTCAGCCCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR TCA 90 bp TTTCCTGGATCTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTaGCCTGGGTGCAGGGCTCCTGACGAGTGGCTTGGCTGTCACCAC +
Preference number: 1 (lower is better)
Translates to: FPGSGARPRRSGLWS*PGCRAPDEWLGCHH
Trigger: GTGGTGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGATCCAGGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR GCA 90 bp ACTCCTGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGC +
Preference number: 1 (lower is better)
Translates to: TPVVEPLRTGPGRDS*WTSCWGEWPWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 90 bp CAGGGGCTGAGCCTGGCGGTGCGGACGGTACTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGAACAGGTC +
Preference number: 1 (lower is better)
Translates to: QGLSLAVRTVLLGGW*LHHKLLWWSLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAGGCTCAGCCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 90 bp GCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACTaGCAGCTCTGTTTCTCTTCCAGTCCCCACACCTCCCAGGTTGGG +
Preference number: 1 (lower is better)
Translates to: ARLQDRHCLPRPASH*QLCFSSSPHTSQVG
Trigger: CCCAACCTGGGAGGTGTGGGGACTGGAAGAGAAACAGAGCTGGCAGTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp CCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCC +
Preference number: 1 (lower is better)
Translates to: PGGLPEPTEPRSHYP*SPPDQSRCHAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp CCGCTCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATaGCCTTCTGCTTCCAGCTCCGCTCCTGCCCCTCCAGGTGTGGGT +
Preference number: 1 (lower is better)
Translates to: PLSAAFCLGRSPLPG*PSASSSAPAPPGVG
Trigger: ACCCACACCTGGAGGGGCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp AGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGGCCATGGGGCTCAAGCTCATGCTTG +
Preference number: 1 (lower is better)
Translates to: RRGSPWMDPSKRRPQ*TQPCTRPWGSSSCL
Trigger: CAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp GCACTAGGCGCACCTCCCCTGCCGCACAGGAATTGTGGGCAGTCTTaGCCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGC +
Preference number: 1 (lower is better)
Translates to: ALGAPPLPHRNCGQS*PRQHWGLWPSTERS
Trigger: GCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGGGGAGGTGCGCCTAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp GCAGGTTTGCACGTGTGCAGGAGTGTTGTGCAGGGGGAGGAGCCCTaGGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGA +
Preference number: 1 (lower is better)
Translates to: AGLHVCRSVVQGEEP*GDPTLVAFQSPQNR
Trigger: TCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACACGTGCAAACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp ACCACCCCAGCCGGGCTCATGCGAGGCTGTGATGCTGGAGGTCCTTaGCCTGCTCCTTGGGGGTCCACAGGGACTGGGACAGGTGGTTTT +
Preference number: 1 (lower is better)
Translates to: TTPAGLMRGCDAGGP*PAPWGSTGTGTGGF
Trigger: AAAACCACCTGTCCCAGTCCCTGTGGACCCCCAAGGAGCAGGCCAAGGACCTCCAGCATCACAGCCTCGCATGAGCCCGGCTGGGGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp GAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCC +
Preference number: 1 (lower is better)
Translates to: EVALPVEPTGSEQVP*TASPPLSVCHQSFA
Trigger: GGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp TGCAGGGCCAGCTGGTGCAGCTGCATGTCGTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCGGCTGTCATTTCCTGGATCTCTGCG +
Preference number: 1 (lower is better)
Translates to: CRASWCSCMSSRPWL*CSSLTPAVISWISA
Trigger: CGCAGAGATCCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR GCA 90 bp AGGGCCAGCTGGTGCAGCTGCATGTCGTCCAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCTGTCATTTCCTGGATCTGGTGCACG +
Preference number: 1 (lower is better)
Translates to: RASWCSCMSSRPWLC*SSLTPAVISWIWCT
Trigger: CGTGCACCAGATCCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGACATGCAGCTGCACCAGCTGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR GCA 90 bp TGCAGGGCCAGCTGGTGCAGCTGCATGTCGTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCGGCTGTCATTTCCTGGATCTGGTGC +
Preference number: 1 (lower is better)
Translates to: CRASWCSCMSSRPWL*CSSLTPAVISWIWC
Trigger: GCACCAGATCCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR CCA 90 bp CGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTaGCCGATGCCCCTGAGTGAGTTACAGCCGGCATCTCACCAGCCC +
Preference number: 1 (lower is better)
Translates to: RQHWGLWPSTERSLL*PMPLSELQPASHQP
Trigger: GGGCTGGTGAGATGCCGGCTGTAACTCACTCAGGGGCATCGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp CCCCTGCCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTaGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGATG +
Preference number: 1 (lower is better)
Translates to: PLPHRNCGQSCPRQH*GLWPSTERSLLWPM
Trigger: CATCGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp GGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTaGCAGTGTGGGAAACTGCAGAGCTGTCTCTCCAGGGTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: GALAACAHQDCLLGS*QCGKLQSCLSRVWA
Trigger: GGCCCAGACCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp TGCCCGGGAAGCTCCTGCTGGCCAGGTCCAGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGTGCTGCTTCTCTTCTGCCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: CPGSSCWPGPAPAHR*YRTPGSAASLLPPP
Trigger: GGGAGGAGGCAGAAGAGAAGCAGCACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 90 bp GAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCT +
Preference number: 1 (lower is better)
Translates to: EPRSHYPWSPPDQSR*HAQLVPHSPSVTKA
Trigger: AGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp CCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGCTCATaGTTGTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCAC +
Preference number: 1 (lower is better)
Translates to: PQCTQPCTRPWGSSS*LSPVSWRVVWRGLH
Trigger: GTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp CGGAGAACCCTGAGTGGGACGTGGTCTACAGCGTTCAAGAACATCTaGAAAGGCGGGCTTCGGGCGGGCACACCTGCTTGCAGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: RRTLSGTWSTAFKNI*KGGLRAGTPACSLR
Trigger: CCTGAGGCTGCAAGCAGGTGTGCCCGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGTTCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR GCA 90 bp AGGGCCAGCTGGTGCAGCTGCATGTCGTCCAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCTGTCATTTCCTGGATCTCTGCGAGA +
Preference number: 1 (lower is better)
Translates to: RASWCSCMSSRPWLC*SSLTPAVISWISAR
Trigger: TCTCGCAGAGATCCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGACATGCAGCTGCACCAGCTGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 90 bp AAGCCACCTGTGAGCAGAGTGGGTCCTGAGGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGA +
Preference number: 1 (lower is better)
Translates to: KPPVSRVGPEASWLR*EQSRLQLRGSGVFG
Trigger: TCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTCACAGGTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp CGGACGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGA +
Preference number: 1 (lower is better)
Translates to: RTVLLGGWCLHHKLL*WSLSEQVQGETVAG
Trigger: TCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR TCA 90 bp CCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATGGGAGCAGAGTCGGCTTCAGCTCCG +
Preference number: 1 (lower is better)
Translates to: PGQWLKEATCEQSGS*GLMAEMGAESASAP
Trigger: CGGAGCTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp ACGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCT +
Preference number: 1 (lower is better)
Translates to: TVLLGGWCLHHKLLW*SLSEQVQGETVAGP
Trigger: AGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 90 bp TCTGTCCACAAGGCCCAGAGGAAGGACAGAAATAGGAATCCCCAGTaGGGCCAGAGAAGCTTCTCGGGTCAGCCAGGGGCCATGGCTGCC +
Preference number: 1 (lower is better)
Translates to: SVHKAQRKDRNRNPQ*GQRSFSGQPGAMAA
Trigger: GGCAGCCATGGCCCCTGGCTGACCCGAGAAGCTTCTCTGGCCCCACTGGGGATTCCTATTTCTGTCCTTCCTCTGGGCCTTGTGGACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp TCAGTGGTCAAGAACGGCCTCCTATTTTATACGGGAGGAAACTGGTaGACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTGCAG +
Preference number: 1 (lower is better)
Translates to: SVVKNGLLFYTGGNW*TASALWPLVLTWVQ
Trigger: CTGCACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTCTTGACCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTaGGATGGGCCTGAGACTAGCAGGGATGCACGGGCCATTCCTCTA +
Preference number: 1 (lower is better)
Translates to: GVQGTGLNDCGLSVL*DGPETSRDARAIPL
Trigger: TAGAGGAATGGCCCGTGCATCCCTGCTAGTCTCAGGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp ACCTCAGTGGTCAAGAACGGCCTCCTATTTTATACGGGAGGAAACTaGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTG +
Preference number: 1 (lower is better)
Translates to: TSVVKNGLLFYTGGN*CTASALWPLVLTWV
Trigger: CACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTCTTGACCACTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 90 bp GCCAACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCA +
Preference number: 1 (lower is better)
Translates to: ANTMALWTLDSQTLN*LPETLRERAPGCMA
Trigger: TGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp TGTCTGGAATTCTCCATCTTCCGTGAGGGAGGCTGGGCTGATGGCTaGGGGCCCAGAGGAGTCCATGCTTCAACACAGGCAAGAGGGAAC +
Preference number: 1 (lower is better)
Translates to: CLEFSIFREGGWADG*GPRGVHASTQARGN
Trigger: GTTCCCTCTTGCCTGTGTTGAAGCATGGACTCCTCTGGGCCCTCAGCCATCAGCCCAGCCTCCCTCACGGAAGATGGAGAATTCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp CACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACT +
Preference number: 1 (lower is better)
Translates to: HSDDCELRLGSSGSL*PSGLSLGELTVWET
Trigger: AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp GACCCTGCTTCATGGTGGACACCACCTGCTGTGTCTCCCCAACACTaGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCTCTTGCTT +
Preference number: 1 (lower is better)
Translates to: DPASWWTPPAVSPQH*CVPSLMVHGTGLLL
Trigger: AAGCAAGAGCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAGCAGGTGGTGTCCACCATGAAGCAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 90 bp TGTACTAATGGGAATGGCTTTGGGAAGTGCCCACATGCTCACATCTaGGCCAGCACTAGGCGCACCTCCCCTGCCGCACAGGAATTGTGG +
Preference number: 1 (lower is better)
Translates to: CTNGNGFGKCPHAHI*ASTRRTSPAAQELW
Trigger: CCACAATTCCTGTGCGGCAGGGGAGGTGCGCCTAGTGCTGGCTCAGATGTGAGCATGTGGGCACTTCCCAAAGCCATTCCCATTAGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp GCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTaGTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCA +
Preference number: 1 (lower is better)
Translates to: ACRSWLRPCFMVDTT*CVSPTLVCTFPHGP
Trigger: TGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAGCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp GGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACACGTGCCTaGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCC +
Preference number: 1 (lower is better)
Translates to: GSSRRHLLGFFITRA*GTHTIPFHRKERVP
Trigger: GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp AAGGTGACTGGCAGGGGAAGCCTGGACATGGGGAGTGTGCATGTATaGATGTGTGCATGTGTGTGTGTGCATGCGTGTGCATCTGTGTGC +
Preference number: 1 (lower is better)
Translates to: KVTGRGSLDMGSVHV*MCACVCVHACASVC
Trigger: GCACACAGATGCACACGCATGCACACACACACATGCACACATCCATACATGCACACTCCCCATGTCCAGGCTTCCCCTGCCAGTCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp ACTGCAGATGGAGCAGGCTTTCCTGGAGGAAGGATGAGCTTTGTCTaGAATTCTCCATCTTCCGTGAGGGAGGCTGGGCTGATGGCTGAG +
Preference number: 1 (lower is better)
Translates to: TADGAGFPGGRMSFV*NSPSSVREAGLMAE
Trigger: CTCAGCCATCAGCCCAGCCTCCCTCACGGAAGATGGAGAATTCCAGACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCATCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp TGGCAGGGGAAGCCTGGACATGGGGAGTGTGCATGTATGGATGTGTaGATGTGTGTGTGTGCATGCGTGTGCATCTGTGTGCAGATGTGT +
Preference number: 1 (lower is better)
Translates to: WQGKPGHGECACMDV*MCVCACVCICVQMC
Trigger: ACACATCTGCACACAGATGCACACGCATGCACACACACACATGCACACATCCATACATGCACACTCCCCATGTCCAGGCTTCCCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp ATTCGACTCATGGTATTTTCTACCCGGAGAACCCTGAGTGGGACGTaGTCTACAGCGTTCAAGAACATCTGCAAAGGCGGGCTTCGGGCG +
Preference number: 1 (lower is better)
Translates to: IRLMVFSTRRTLSGT*STAFKNICKGGLRA
Trigger: CGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGTTCTCCGGGTAGAAAATACCATGAGTCGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 90 bp TGTGTGTGCATGCATGTGGATGTGTGCATGTGTGCATGTAGGTCTTaGCTCAGACCCTGCTTCATGGTGGACACCACCTGCTGTGTCTCC +
Preference number: 1 (lower is better)
Translates to: CVCMHVDVCMCACRS*LRPCFMVDTTCCVS
Trigger: GGAGACACAGCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACATGCACACATCCACATGCATGCACACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp TCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACACGTaGCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGT +
Preference number: 1 (lower is better)
Translates to: SWFKQEASARVLYYT*LGHTHDSLSQKGEG
Trigger: ACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp CACCACCTGCTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATaGTCCATGGGACTGGGCTCTTGCTTCCAAGTTTCTTCAAAGGAA +
Preference number: 1 (lower is better)
Translates to: HHLLCLPNTGVYLPS*SMGLGSCFQVSSKE
Trigger: TTCCTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAGCAGGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp GCTGACAATTCGACTCATGGTATTTTCTACCCGGAGAACCCTGAGTaGGACGTGGTCTACAGCGTTCAAGAACATCTGCAAAGGCGGGCT +
Preference number: 1 (lower is better)
Translates to: ADNSTHGIFYPENPE*DVVYSVQEHLQRRA
Trigger: AGCCCGCCTTTGCAGATGTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGTTCTCCGGGTAGAAAATACCATGAGTCGAATTGTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 90 bp GTGTGCAGATGTGTGCGTGTGTGCATGTATGTGTGTGCATGCATGTaGATGTGTGCATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCT +
Preference number: 1 (lower is better)
Translates to: VCRCVRVCMYVCACM*MCACVHVGLGSDPA
Trigger: AGCAGGGTCTGAGCCAAGACCTACATGCACACATGCACACATCCACATGCATGCACACACATACATGCACACACGCACACATCTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp GTTCAGCCCAAGAGCAGAGCTTCTCAGGCCGTCAATTACTGCAGATaGAGCAGGCTTTCCTGGAGGAAGGATGAGCTTTGTCTGGAATTC +
Preference number: 1 (lower is better)
Translates to: VQPKSRASQAVNYCR*SRLSWRKDELCLEF
Trigger: GAATTCCAGACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCATCTGCAGTAATTGACGGCCTGAGAAGCTCTGCTCTTGGGCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp ATGTGTGCGTGTGTGCATGTATGTGTGTGCATGCATGTGGATGTGTaGATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTG +
Preference number: 1 (lower is better)
Translates to: MCACVHVCVCMHVDV*MCACRSWLRPCFMV
Trigger: CACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACATGCACACATCCACATGCATGCACACACATACATGCACACACGCACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 90 bp AACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCTCTTaGTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGA +
Preference number: 1 (lower is better)
Translates to: NTGVYLPSWSMGLGS*FQVSSKEEDSHCPG
Trigger: TCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp TGCTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATaGGACTGGGCTCTTGCTTCCAAGTTTCTTCAAAGGAAGAAGATA +
Preference number: 1 (lower is better)
Translates to: CCVSPTLVCTFPHGP*DWALASKFLQRKKI
Trigger: TATCTTCTTCCTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 90 bp AGCTTCTTTCCTGGGGCTGCTTTCTGCCTTTTAACTCAGTGGACCTaGACTCTTAGCGTTTGGTGTAATTTAGGATCAGGTCTGAGTGTG +
Preference number: 1 (lower is better)
Translates to: SFFPGAAFCLLTQWT*TLSVWCNLGSGLSV
Trigger: CACACTCAGACCTGATCCTAAATTACACCAAACGCTAAGAGTCCAGGTCCACTGAGTTAAAAGGCAGAAAGCAGCCCCAGGAAAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR TCA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: PASLTADLARATGLTTPAGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGTGGCTGCCTCGCCTCTaGCAGGACACAAGGCGCCGG +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKWLPRL*QDTRRR
Trigger: CCGGCGCCTTGTGTCCTGGCAGAGGCGAGGCAGCCA...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACCCGGCTGGGTGTGTCTaGGCTGGTAGCCCACATGGG +
Preference number: 2 (lower is better)
Translates to: RSWARLQDRHCLPRPASHPAGCV*AGSPHG
Trigger: CCCATGTGGGCTACCAGCTCAGACACACCCAGCCGG...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCTCCGCCAGCTGGGCTaGACCAGCCCAACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: LDGPVKEAASMHAALHQALRQLG*TSPTPA
Trigger: GGCTGGGGTTGGGCTGGTGCAGCCCAGCTGGCGGAG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCAGCCTTAGGGGAGTCTaGCCCGGCCCCGGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPSLRGV*PGPGWV
Trigger: CACCCAGCCGGGGCCGGGGCAGACTCCCCTAAGGCT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCCCAGGAGCAGGGTCTaGCGCCTCCCACACCCCACC +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPPRSRV*RLPHPT
Trigger: GGTGGGGTGTGGGAGGCGGCAGACCCTGCTCCTGGG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GCCTCCTTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 2 (lower is better)
Translates to: ASLGLRPWRSRCRVGMCRSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTCTGCCCCTCCAGGTGTaGGTGACGTGGAAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPLPLQV*VTWKGA
Trigger: AGCCCCCTTCCACGTCACCCACACCTGGAGGGGCAG...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp GGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCCTGCCAGCCTG +
Preference number: 2 (lower is better)
Translates to: GASPNRSRARQLLDL*LGRVALVSQGPASL
Trigger: CAGGCTGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR TCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 2 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLRCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp TACGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: YGRKLVHGLGALASGPDLGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...CAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CAA 90 bp GGCTTGGGAACCACCTCTCCTGTGAGATCCCAGACACACAGGCAGTaGCTGGCTGCCCCGGGCCTCCCAGATGGGCACCTGAGGACCCCG +
Preference number: 2 (lower is better)
Translates to: GLGTTSPVRSQTHRQ*LAAPGLPDGHLRTP
Trigger: CGGGGTCCTCAGGTGCCCATCTGGGAGGCCCGGGGCAGCCAGCAACTGCCTGTGTGTCTGGGATCTCACAGGAGAGGTGGTTCCCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGCTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: WGQCWLLTPLPGKLLLARLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...CCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR TCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 2 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGCCACATGCTCACATCTaGGCCAGCACTAGGCGCACC +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKPHAHI*ASTRRT
Trigger: GGTGCGCCTAGTGCTGGCTCAGATGTGAGCATGTGG...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCGGGCTTCATGTGGCCTaGCTGGCCGTCCCCTCTTGG +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPGLHVA*LAVPSW
Trigger: CCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCC...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: MGRLPVLAQVSLQRAGSQLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...CTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPSAPGQ*GLWKPW
Trigger: CCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGA...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GCAGTGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: AVGAVLAADPTAREAPAGASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...GCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGGGCCTCTCAGTGCTCTaGGATGGGCCTGAGACTAGC +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKGLSVL*DGPETS
Trigger: GCTAGTCTCAGGCCCATCCCAGAGCACTGAGAGGCC...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: EQVQGETVAGPLAGESGPRRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAAAGTTAGGGGTGGGCTaGCCCGGCCTTTGCTGCCCC +
Preference number: 2 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPKLGVG*PGLCCP
Trigger: GGGGCAGCAAAGGCCGGGCCAGCCCACCCCTAACTT...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCCTTGGCCTGCTCCTTaGGGGTCCACAGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPPWPAP*GSTGTG
Trigger: CCCAGTCCCTGTGGACCCCCAAGGAGCAGGCCAAGG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGCACATTTCCCCCGCCTaGGGAACCCAGAGTCCATGG +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKHISPA*GTQSPW
Trigger: CCATGGACTCTGGGTTCCCCAGGCGGGGGAAATGTG...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGCCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 2 (lower is better)
Translates to: WGQCWLLTPLPGKLLLARPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...CCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR-3UTR TCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCGCTCATGCGAGGCTGTaGTGCTGGAGGTCCTTGGCC +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPAHARL*CWRSLA
Trigger: GGCCAAGGACCTCCAGCATCACAGCCTCGCATGAGC...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 2 (lower is better)
Translates to: TPASSSCLGFSPRAELLRCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 2 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCCTCCGCCAGCTGGGCTaGACCAGCCCAACCCCAGCC +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPLRQLG*TSPTPA
Trigger: GGCTGGGGTTGGGCTGGTGCAGCCCAGCTGGCGGAG...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTTCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTC +
Preference number: 2 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPSEQVP*TASPPL
Trigger: GAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGA...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: LDGPVKEAASMHAALHQACAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCTGGGAAGTGCCCACATaGTCACATCTGAGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: PASLTADLARATGLTTPAWEVPT*SHLSQH
Trigger: GTGCTGGCTCAGATGTGAGCATGTGGGCACTTCCCA...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCCCAGGATGGCCTTCTaGTTCCAGCTCCGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPPRMAF*FQLRSC
Trigger: GCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 2 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 2 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGASAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 2 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTCCGGCTTGGGAGCTCTaGCAGCCTGTGCCCATCAGG +
Preference number: 2 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRPAWEL*QPVPIR
Trigger: CCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGG...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSRGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGAGCCCCCTCCCAGGATGGCCTTCTGCTTCCAGCTCCGCTCCTGCCCCTCCAGCCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: GAPSQDGLLLPAPLLPLQPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...CTGGAGGGGCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGGAGGGGGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 2 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTGGCGGTGCGGACGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LAVRTVLLGGWCLHHKLLAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCGGCCTTTGCTGCCCCTaGGGTCTATGGCGTGTGGCG +
Preference number: 2 (lower is better)
Translates to: TWASCGLPGRPLLGKSQGGLCCP*GLWRVA
Trigger: CGCCACACGCCATAGACCCCAGGGGCAGCAAAGGCC...GCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp GGTGGAGGAGGGTCTCTGGCTGGATCTCAGGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCA +
Preference number: 2 (lower is better)
Translates to: GGGGSLAGSQVTELG*HHKRGLCLAGPALA
Trigger: TGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCTCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp AACTCCTGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTaGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGG +
Preference number: 2 (lower is better)
Translates to: NSCGGASPNRSRARQ*LDLLLGRVALVSQG
Trigger: CCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR TCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCATGCTTGTCTCCAGTaGGCTGGAGGGTGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAHACLQ*AGGWCG
Trigger: GCCACACCACCCTCCAGCTCACTGGAGACAAGCATG...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TGGGGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 2 (lower is better)
Translates to: WGWRTAPSHGARGPPRARRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...ACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR TCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTGCCAGCTTGACCGCTaGCCTGGCCCGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSCQLDR*PGPGHR
Trigger: CCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 2 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: RSWARLQDRHCLPRPASHSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGCAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLQCTQP*TRPWGS
Trigger: TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTGCCCAGAGGAGTCCATaGTTCAACACAGGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPAQRSP*FNTGKR
Trigger: CCTCTTGCCTGTGTTGAAGCATGGACTCCTCTGGGC...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TACGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 2 (lower is better)
Translates to: YGRKLVHGLGALASGPDLELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...CAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 2 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCCCGGCTTGGGAGCTCTaGCAGCCTGTGCCCATCAGG +
Preference number: 2 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSPAWEL*QPVPIR
Trigger: CCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGG...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCAGAGGGGTTCAGGTCTaGGAGGAACCTGGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPRGVQV*EEPGSC
Trigger: GCAGGACCCAGGTTCCTCCCAGACCTGAACCCCTCT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTGAGCTGGAGGGTGGTGTaGCGTGGTCTTCACCACACA +
Preference number: 2 (lower is better)
Translates to: GGNWCTASALWPLVLTWVSWRVV*RGLHHT
Trigger: TGTGTGGTGAAGACCACGCCACACCACCCTCCAGCT...CACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCCGGAGAACCCTGAGTaGGACGTGGTCTACAGCGTT +
Preference number: 2 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPPENPE*DVVYSV
Trigger: AACGCTGTAGACCACGTCCCACTCAGGGTTCTCCGG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTGAACGCAGCCTTCTGTaGCCGATGCCCCTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPERSLL*PMPLSE
Trigger: CTCACTCAGGGGCATCGGCCACAGAAGGCTGCGTTC...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTGCCGCACAGGAATTGTaGGCAGTCTTGCCCTCGGCA +
Preference number: 2 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPAAQEL*AVLPSA
Trigger: TGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGC...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACTTCCCTCATGGTCCATaGGACTGGGCTCTTGCTTCC +
Preference number: 2 (lower is better)
Translates to: RSWARLQDRHCLPRPASHFPHGP*DWALAS
Trigger: GGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAA...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCACATGGGCTTCATGTaGCCTGCCTGGCCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: CFNTGKREPATPCPGPPCHMGFM*PAWPSP
Trigger: AGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTG...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp CCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTaGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGATGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PHRNCGQSCPRQHWG*WPSTERSLLWPMPL
Trigger: CAGGGGCATCGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp AGCACTAGGCGCACCTCCCCTGCCGCACAGGAATTGTGGGCAGTCTaGCCCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAG +
Preference number: 2 (lower is better)
Translates to: STRRTSPAAQELWAV*PSAALGLVAIYRTQ
Trigger: CTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGGGGAGGTGCGCCTAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: RKERVPLDGPVKEAASMHGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCCTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGALELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCATTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: GWRTAPSHGARGPPRARPLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...TGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR TCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTTTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCCGGCTGGGTGTGTCTaGGCTGGTAGCCCACATGGG +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAPAGCV*AGSPHG
Trigger: CCCATGTGGGCTACCAGCTCAGACACACCCAGCCGG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGACACAGCTCGCCGCCGTaGGAACGGTCATGGGCCCGG +
Preference number: 2 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGHSSPP*ERSWAR
Trigger: CCGGGCCCATGACCGTTCTCACGGCGGCGAGCTGTG...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 2 (lower is better)
Translates to: CGGASPNRSRARQLLDLLCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...CAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR GCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCACCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 2 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 2 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTTCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: SHGARGPPRARPQTSLWISPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...AATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp GGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: GRLLLMEPVDLQGHVHRHTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...ATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 2 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGTTGGAAGCCCTGGCTTaGAAGGGAAAGCACAGCCAT +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKLEALA*KGKHSH
Trigger: ATGGCTGTGCTTTCCCTTCCAAGCCAGGGCTTCCAA...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHSAPGQ*GLWKPW
Trigger: CCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGA...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCCCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPLGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp GTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGAACAGGTCCAGGGGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 2 (lower is better)
Translates to: VVPTPQTPVVEPLRTGPGAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...CCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp TTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGGATGCCACGAAGGGGGCTCTaGGTTTCTCATTTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LGLRPWRSRCRVGMCRRMPRRGL*VSHFPA
Trigger: AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...CATCCTCCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
3UTR-3UTR CCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTTGCCCCTGGGGTCTATaGCGTGTGGCGAAGGTGACT +
Preference number: 2 (lower is better)
Translates to: CFNTGKREPATPCPGPPCCPWGL*RVAKVT
Trigger: AGTCACCTTCGCCACACGCCATAGACCCCAGGGGCA...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCTGCTGCTTTCTGTCTaGGAAGGAGCCCCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: CFNTGKREPATPCPGPPCLLLSV*EGAPSQ
Trigger: CTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAG...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCACAGAAGCAGACGCAGTaGGGGGCTGAGAAACCCAGC +
Preference number: 2 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSQKQTQ*GAEKPS
Trigger: GCTGGGTTTCTCAGCCCCCCACTGCGTCTGCTTCTG...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp CAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGCTCATGCTaGTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCAC +
Preference number: 2 (lower is better)
Translates to: QCTQPCTRPWGSSSC*SPVSWRVVWRGLHH
Trigger: GTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp CTGGGGAACCCAGAGTCCATGGGCCACGACGGGCTGATGCTCGGCTaGGGAACCACCTCTCCTGTGAGATCCCAGACACACAGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: LGNPESMGHDGLMLG*GTTSPVRSQTHRQL
Trigger: CAACTGCCTGTGTGTCTGGGATCTCACAGGAGAGGTGGTTCCCAAGCCGAGCATCAGCCCGTCGTGGCCCATGGACTCTGGGTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 2 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACCTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 2 (lower is better)
Translates to: RKERVPLDGPVKEAASMHLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGTTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCACCACACACAGACAGTaGAGGGGGCAGTGGTGTTCA +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPTTHRQ*RGQWCS
Trigger: TGAACACCACTGCCCCCTTCACTGTCTGTGTGTGGT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGCAAGAAAGAGCAAGTaGGCCGCAGGGAGGTGCCGC +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPARKSK*AAGRCR
Trigger: GCGGCACCTCCCTGCGGCTCACTTGCTCTTTCTTGC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR TCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGGCGGGTGGATCACCTaGGGTCGGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: RKERVPLDGPVKEAASMHGGWIT*GREFET
Trigger: GGTCTCAAACTCCCGACCTCAGGTGATCCACCCGCC...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR TCA 90 bp CGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCGTCTCAGGATCCTCCTaGGGGACGTCTTTGTTACCC +
Preference number: 2 (lower is better)
Translates to: RDSCWTSCWGEWPWSRRGVSGSS*GTSLLP
Trigger: GGGTAACAAAGACGTCCCTCAGGAGGATCCTGAGAC...GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR TCA 90 bp ATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 2 (lower is better)
Translates to: MEPVDLQGHVHRHLSGFPPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...AGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR GCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGCAGGTTTGCACGTGTaGAGGAGTGTTGTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRAGLHV*RSVVQG
Trigger: CCCCTGCACAACACTCCTGCACACGTGCAAACCTGC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCTGGGGCTCAAGCTCATaGTTGTCTCCAGTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: RDSCWTSCWGEWPWSRRGWGSSS*LSPVSW
Trigger: CCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCA...GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCGTAGTACAGGTGCCGTaGCCTGTGGTCGCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSVVQVP*PVVALK
Trigger: CTTCAGGGCGACCACAGGGCACGGCACCTGTACTAC...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp TCGTCCAGGCCATGGCTGTGCTGCTCCTCACTGACCCCGGCTGTCATTTCCTGGTGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: SSRPWLCCSSLTPAVISWCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...CCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR GCA 90 bp CGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 2 (lower is better)
Translates to: RDSCWTSCWGEWPWSRRGVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 2 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 2 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACCGGCTTGGGAGCTCTaGCAGCCTGTGCCCATCAGG +
Preference number: 2 (lower is better)
Translates to: QWCSGHRAERLWPLSALGPAWEL*QPVPIR
Trigger: CCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASRGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVRGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TACGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: YGRKLVHGLGALASGPDLIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...CAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 2 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: TRQRGGLNARSPAPGHGARAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 2 (lower is better)
Translates to: TPASSSCLGFSPRAELLREGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 2 (lower is better)
Translates to: MEPVDLQGHVHRHLSGFPKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...AGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp ACGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 2 (lower is better)
Translates to: TCRNCRGCRRSGVRGSGGGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...GCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAGTTCCTACACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCGTGTACCTTCCCTCATaGTCCATGGGACTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPVYLPS*SMGLGS
Trigger: AGAGCCCAGTCCCATGGACCATGAGGGAAGGTACAC...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGTGTGGCGAAGGTGACTaGCAGGGGAAGCCTGGACAT +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLCGEGD*QGKPGH
Trigger: ATGTCCAGGCTTCCCCTGCCAGTCACCTTCGCCACA...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTCTGCCCCTCCAGGTGTaGGTGACGTGGAAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLLPLQV*VTWKGA
Trigger: AGCCCCCTTCCACGTCACCCACACCTGGAGGGGCAG...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACTGCAAAAAGAAAGGTTaGCTTCCCCGACTTCCCGCA +
Preference number: 2 (lower is better)
Translates to: RSWARLQDRHCLPRPASHCKKKG*LPRLPA
Trigger: TGCGGGAAGTCGGGGAAGCCAACCTTTCTTTTTGCA...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTCGTTCTTGCGAGTCTaGACCTGCCAGCTTGACCGC +
Preference number: 2 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRSFLRV*TCQLDR
Trigger: GCGGTCAAGCTGGCAGGTCCAGACTCGCAAGAACGA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGTGGAGCAGGCTTTCCTaGAGGAAGGATGAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKWSRLS*RKDELC
Trigger: ACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCA...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTTGGAGCAGGCTTTCCTaGAGGAAGGATGAGCTTTGT +
Preference number: 2 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPWSRLS*RKDELC
Trigger: ACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCA...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp TGGGAGGAACCTGGGTCCTGCACAGTGATGACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGG +
Preference number: 2 (lower is better)
Translates to: WEEPGSCTVMTVNSG*GALAACAHQDCLLG
Trigger: CCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: TLRERAPGCMADRHEVRDHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCTATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCATATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCTATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: TWASCGLPGRPLLGKSQGYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...GCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: SQTLNWLPETLRERAPGCEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCATGCTTGTCTCCAGTaGGCTGGAGGGTGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAHACLQ*AGGWCG
Trigger: GCCACACCACCCTCCAGCTCACTGGAGACAAGCATG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCTACCCGGAGAACCCTaGGTGGGACGTGGTCTACAG +
Preference number: 2 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGLPGEP*VGRGLQ
Trigger: CTGTAGACCACGTCCCACTCAGGGTTCTCCGGGTAG...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR TCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTTGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 2 (lower is better)
Translates to: EQVQGETVAGPLAGESGPCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR GCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 2 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 2 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 2 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: QWCSGHRAERLWPLSALGCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCCGAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: PASSSCLGFSPRAELLRPRGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...CGGCCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GCCCACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAATGGTGGACACCACCTaGTGTGTCTCCCCAACACTG +
Preference number: 2 (lower is better)
Translates to: AHMGFMWPAWPSPLGQVSMVDTT*CVSPTL
Trigger: CAGTGTTGGGGAGACACAGCAGGTGGTGTCCACCAT...TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTGGAGGTCCTTGGCCTaGTCCTTGGGGGTCCACAGG +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPWRSLA*SLGVHR
Trigger: CCTGTGGACCCCCAAGGAGCAGGCCAAGGACCTCCA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCCGAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: PASSSCLGFSPRAELLRPNTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...CGGCCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGAGAGGGGTTCAGGTCTaGGAGGAACCTGGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: PETLRERAPGCMADRHEVRGVQV*EEPGSC
Trigger: GCAGGACCCAGGTTCCTCCCAGACCTGAACCCCTCT...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSRGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 2 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTGGCGGTGCGGACGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 2 (lower is better)
Translates to: LAVRTVLLGGWCLHHKLLRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 2 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPSAPGQ*GLWKPW
Trigger: CCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTAAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 2 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGAGACCCTACCCTGGTaGCCTTCCAGAGCCCACAGA +
Preference number: 2 (lower is better)
Translates to: RKERVPLDGPVKEAASMHETLPW*PSRAHR
Trigger: TCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTC...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGAGACCCTACCCTGGTaGCCTTCCAGAGCCCACAGA +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPETLPW*PSRAHR
Trigger: TCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLRAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTCCCTGCACCAGGCCATaGGGCTCAAGCTCATGCTTG +
Preference number: 2 (lower is better)
Translates to: SQTLNWLPETLRERAPGCPCTRP*GSSSCL
Trigger: CAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGG...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCACCCTGAGTGGGACGTaGTCTACAGCGTTCAAGAAC +
Preference number: 2 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGATLSGT*STAFKN
Trigger: GTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGT...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 2 (lower is better)
Translates to: EQVQGETVAGPLAGESGPWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp TCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 2 (lower is better)
Translates to: SHGARGPPRARPQTSLWILGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...AATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCATGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCAGAAGCAGACGCAGTaGGGGGCTGAGAAACCCAGC +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAQKQTQ*GAEKPS
Trigger: GCTGGGTTTCTCAGCCCCCCACTGCGTCTGCTTCTG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: SQTLNWLPETLRERAPGCLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: QWCSGHRAERLWPLSALGEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTACCACACACAGACAGTaGAGGGGGCAGTGGTGTTCA +
Preference number: 2 (lower is better)
Translates to: EQVQGETVAGPLAGESGPTTHRQ*RGQWCS
Trigger: TGAACACCACTGCCCCCTTCACTGTCTGTGTGTGGT...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR TCA 90 bp GGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCAAGTTTGAGACCAGCTTaGCCAACACAGAGAAACCCC +
Preference number: 2 (lower is better)
Translates to: GWRTAPSHGARGPPRARPSLRPA*PTQRNP
Trigger: GGGGTTTCTCTGTGTTGGTCAAGCTGGTCTCAAACT...TGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 2 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLRGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTGCGTTCAAGAACATCTaGAAAGGCGGGCTTCGGGCG +
Preference number: 2 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASAFKNI*KGGLRA
Trigger: CGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGC...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTAATTGTGGGCAGTCTTaGCCTCGGCAGCACTGGGGC +
Preference number: 2 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLNCGQS*PRQHWG
Trigger: GCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATT...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGAAGAAGATAGTCATTaGCCCGGAGCGGGGCAAATC +
Preference number: 2 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLEEDSH*PGAGQI
Trigger: GATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTC...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTCCAGCTTCTTTCCCTGGTAGATGTGCACTCCCCTGAGGGCCAGTCCCAGGATGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LQLLSLVDVHSPEGQSQDELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...ATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGGAAAGAAGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 2 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAAGAGGGGTTCAGGTCTaGGAGGAACCTGGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: QWCSGHRAERLWPLSALGRGVQV*EEPGSC
Trigger: GCAGGACCCAGGTTCCTCCCAGACCTGAACCCCTCT...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCTTGGAAGCCCTGGCTTaGAAGGGAAAGCACAGCCAT +
Preference number: 2 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSLEALA*KGKHSH
Trigger: ATGGCTGTGCTTTCCCTTCCAAGCCAGGGCTTCCAA...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAEGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTCCAGCTTCTTTCCCTGGTAGATGTGCACTCCCCTGAGGGCCAGTCCCAGGATAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 2 (lower is better)
Translates to: LQLLSLVDVHSPEGQSQDRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...ATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGGAAAGAAGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCGAACGCAGCCTTCTGTaGCCGATGCCCCTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPERSLL*PMPLSE
Trigger: CTCACTCAGGGGCATCGGCCACAGAAGGCTGCGTTC...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: LNWLPETLRERAPGCMADHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCACACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: PLSGRPSACKQELQRGVQCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTACCACACACAGACAGTaGAGGGGGCAGTGGTGTTCA +
Preference number: 2 (lower is better)
Translates to: SQTLNWLPETLRERAPGCTTHRQ*RGQWCS
Trigger: TGAACACCACTGCCCCCTTCACTGTCTGTGTGTGGT...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACCTTGCCCAGCTTCTTTCCTGGGGCTGCTTTCTGCCTTTTAACTCAGTGGACCTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 2 (lower is better)
Translates to: TLPSFFPGAAFCLLTQWTCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...GGTCCACTGAGTTAAAAGGCAGAAAGCAGCCCCAGGAAAGAAGCTGGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 2 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTC +
Preference number: 2 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLSEQVP*TASPPL
Trigger: GAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCGCAGGTTTGCACGTGTaGAGGAGTGTTGTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPAGLHV*RSVVQG
Trigger: CCCCTGCACAACACTCCTGCACACGTGCAAACCTGC...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 2 (lower is better)
Translates to: TSTDISLDSLSQELALMPSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...AGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: QWCSGHRAERLWPLSALGSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 2 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGTCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: PETLRERAPGCMADRHEVSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGTCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 2 (lower is better)
Translates to: RKERVPLDGPVKEAASMHIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCTTGGAAGCCCTGGCTTaGAAGGGAAAGCACAGCCAT +
Preference number: 2 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTLEALA*KGKHSH
Trigger: ATGGCTGTGCTTTCCCTTCCAAGCCAGGGCTTCCAA...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 2 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAAGGAGAGGGTCCCCCTaGATGGACCCGTCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGRRGSP*MDPSKR
Trigger: CCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCT...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTGCAGGGAGGTGCCGCTaGCTGTCCTGTCTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: TSTDISLDSLSQELALMPAGRCR*LSCLPS
Trigger: ACTGGGAAGACAGGACAGCCAGCGGCACCTCCCTGC...AGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATGTGGCGAAGGTGACTaGCAGGGGAAGCCTGGACAT +
Preference number: 2 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLCGEGD*QGKPGH
Trigger: ATGTCCAGGCTTCCCCTGCCAGTCACCTTCGCCACA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGCGGTGTCCATTTTTCTaGAAAATAGCCGTATTGCCT +
Preference number: 2 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKRCPFF*KIAVLP
Trigger: AGGCAATACGGCTATTTTCCAGAAAAATGGACACCG...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTAGGGACTGGGACAGGTaGTTTTCTTTTCCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRRDWDR*FSFPLH
Trigger: GTGGAGAGGAAAAGAAAACCACCTGTCCCAGTCCCT...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTCGTTCTTGCGAGTCTaGACCTGCCAGCTTGACCGC +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSSFLRV*TCQLDR
Trigger: GCGGTCAAGCTGGCAGGTCCAGACTCGCAAGAACGA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp GAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTA +
Preference number: 2 (lower is better)
Translates to: ELPGVWQTGMRCGTC*LPPRLMSEPAPHLL
Trigger: TAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTCTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 2 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTCAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 2 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: QWCSGHRAERLWPLSALGDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TGCTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTTCTTTCCCAGAAATGCCAGAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: CCGQPIQLDLQLLSQKCQSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...CTGGCATTTCTGGGAAAGAAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 2 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASRGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGCAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLQCTQP*TRPWGS
Trigger: TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTCAAGCAGGAGGCATCTaGTCGGGTTCTTTATTACAC +
Preference number: 2 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRQAGGI*SGSLLH
Trigger: GTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTG...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAAGCCCCGCTCTCTGCTaGTTTCTGTCTGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGSPALC*FLSGKE
Trigger: CTCCTTCCCAGACAGAAAGCAGCAGAGAGCGGGGCT...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: GSLCPSGLSLGELTVWETLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: LNWLPETLRERAPGCMADLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVNTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 2 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTCCCTGCACCAGGCCATaGGGCTCAAGCTCATGCTTG +
Preference number: 2 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPPCTRP*GSSSCL
Trigger: CAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGG...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCCACGAAGGGGGCTCTaGGTTTCTCATTTCCCTAGT +
Preference number: 2 (lower is better)
Translates to: CSGHRAERLWPLSALGWAPRRGL*VSHFPS
Trigger: ACTAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 2 (lower is better)
Translates to: TLDSQTLNWLPETLRERAFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp CTAGCTCTGGAAGCACCTCAGTGGTCAAGAACGGCCTCCTATTTTATACGGGAGTGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: LALEAPQWSRTASYFIRECHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...CTCCCGTATAAAATAGGAGGCCGTTCTTGACCACTGAGGTGCTTCCAGAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp TCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCCCACGAAGGGGGCTCTaGGTTTCTCATTTCCCTGCT +
Preference number: 2 (lower is better)
Translates to: SKGTSTDISLDSLSQELAPRRGL*VSHFPA
Trigger: AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...GGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509157.5
3UTR-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTGTACCTTCCCTCATaGTCCATGGGACTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSVYLPS*SMGLGS
Trigger: AGAGCCCAGTCCCATGGACCATGAGGGAAGGTACAC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 90 bp TGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGG +
Preference number: 2 (lower is better)
Translates to: WQTGMRCGTCLLPPR*MSEPAPHLLQVNLW
Trigger: CCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 2 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 2 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTTTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: TLDSQTLNWLPETLRERAFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCACAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 2 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 2 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 2 (lower is better)
Translates to: SQTLNWLPETLRERAPGCGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATTCCTTCTTATCCTTGTaGAGCCTGAAGAAGTGCACG +
Preference number: 2 (lower is better)
Translates to: GRLLLMEPVDLQGHVHRHSFLSL*SLKKCT
Trigger: CGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGA...ATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR GCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTATGGGACTGGGCTCTTaGTTCCAAGTTTCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: CFNTGKREPATPCPGPPCMGLGS*FQVSSK
Trigger: CTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCAT...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACAGGCCGTCAATTACTaGAGATGGAGCAGGCTTTCC +
Preference number: 2 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLQAVNY*RWSRLS
Trigger: GGAAAGCCTGCTCCATCTGCAGTAATTGACGGCCTG...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp GTAAACCAGCTTCTGTGCTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTTCTTTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: VNQLLCCGQPIQLDLQLLLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...AAGAAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 2 (lower is better)
Translates to: TLDSQTLNWLPETLRERASQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: SKGTSTDISLDSLSQELANTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...GGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp TCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 2 (lower is better)
Translates to: SHGARGPPRARPQTSLWIQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...AATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 2 (lower is better)
Translates to: TLDSQTLNWLPETLRERAEGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTAGTGTCTCCCCAACACTaGTGTGTACCTTCCCTCATG +
Preference number: 2 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLVSPQH*CVPSLM
Trigger: CATGAGGGAAGGTACACACCAGTGTTGGGGAGACAC...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCGTGTCTCCCCAACACTaGTGTGTACCTTCCCTCATG +
Preference number: 2 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPVSPQH*CVPSLM
Trigger: CATGAGGGAAGGTACACACCAGTGTTGGGGAGACAC...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGTATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: RDARAIPLNAEDSRFARVYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTGTCTGCAGCCATAGCTaGCAATTCGACTCATGGTAT +
Preference number: 2 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPVCSHS*QFDSWY
Trigger: ATACCATGAGTCGAATTGTCAGCTATGGCTGCAGAC...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR GCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCAAGCAGGAGGCATCTaGTCGGGTTCTTTATTACAC +
Preference number: 2 (lower is better)
Translates to: PETLRERAPGCMADRHEVQAGGI*SGSLLH
Trigger: GTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTTGGGAAGTGCCCACATaGTCACATCTGAGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: TLDSQTLNWLPETLRERAWEVPT*SHLSQH
Trigger: GTGCTGGCTCAGATGTGAGCATGTGGGCACTTCCCA...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 2 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 2 (lower is better)
Translates to: NTMALWTLDSQTLNWLPELQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGNTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCATCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 2 (lower is better)
Translates to: TSTDISLDSLSQELALMPGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...AGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTTTATTACACGTGCCTaGGGCACACACACGATTCCC +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSFITRA*GTHTIP
Trigger: GGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCATGGACTCTTAGCGTTTaGTGTAATTTAGGATCAGGT +
Preference number: 2 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPWTLSV*CNLGSG
Trigger: ACCTGATCCTAAATTACACCAAACGCTAAGAGTCCA...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CAA 90 bp CCCGGAGCGGGGCAAATCAATCATCTTGTACTAATGGGAATGGCTTaGGGAAGTGCCCACATGCTCACATCTGAGCCAGCACTAGGCGCA +
Preference number: 2 (lower is better)
Translates to: PGAGQINHLVLMGMA*GSAHMLTSEPALGA
Trigger: TGCGCCTAGTGCTGGCTCAGATGTGAGCATGTGGGCACTTCCCAAAGCCATTCCCATTAGTACAAGATGATTGATTTGCCCCGCTCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGCAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 2 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 2 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCGTTCTTTATTACACGTaGCTGGGGCACACACACGAT +
Preference number: 2 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGVLYYT*LGHTHD
Trigger: ATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAAC...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTGGACATGGGGAGTGTaGATGTATGGATGTGTGCAT +
Preference number: 2 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSWTWGV*MYGCVH
Trigger: ATGCACACATCCATACATGCACACTCCCCATGTCCA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 2 (lower is better)
Translates to: TLDSQTLNWLPETLRERAGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR TCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAACTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 2 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 2 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LQRKKIVIAPERGKSIILAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 2 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQRAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGGTTCTTTATTACACGTaGCTGGGGCACACACACGAT +
Preference number: 2 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLVLYYT*LGHTHD
Trigger: ATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAAC...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp GGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: GSKYLPAWADSR*SPRSACSAQAA
Trigger: GGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
3UTR CCA 72 bp CTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGG +
Preference number: 3 (lower is better)
Translates to: LPWLSAEWRERQ*GQCWLLTPLPG
Trigger: CCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp TGCCGCAGCTGTTGCAGAGTGGGCCGCACGCGGAGGTaGAGCTGGTGGCTGGCGCGCAGCAGGTGCAGCAGG +
Preference number: 3 (lower is better)
Translates to: CRSCCRVGRTRR*SWWLARSRCSR
Trigger: CCTGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGCGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp TGTTGCAGAGTGGGCCGCACGCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGCAGCAGGTGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: CCRVGRTRRWSW*LARSRCSRCLD
Trigger: GTCCAGGCACCTGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCGCGTGCGGCCCACTCTGCAACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp TCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: SAEWRERQWGQC*LLTPLPGKLLL
Trigger: CAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCACTCCGCCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CAA 90 bp GGTCTGCCGCCTCCCACACCCCACCCAGCAGGGAGAGCTGCGCCCTCAGACCCAGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: GLPPPTPHPAGRAAPSDPGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...TGGGTCTGAGGGCGCAGCTCTCCCTGCTGGGTGGGGTGTGGGAGGCGGCAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 3 (lower is better)
Translates to: GWRTAPSHGARGPPRARPHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...TGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CAA 90 bp TGGGGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 3 (lower is better)
Translates to: WGWRTAPSHGARGPPRARHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...ACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR TCA 72 bp CCTGGAAGGCAGCCTCCCCATCACAGCTCGCCGCCGTaGGAACGGTCATGGGCCCGGCTGCAGGACCGGCAT +
Preference number: 3 (lower is better)
Translates to: PGRQPPHHSSPP*ERSWARLQDRH
Trigger: ATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTGTGATGGGGAGGCTGCCTTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp AGGGCTCCTGACGAGTGGCTTGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGGTCCTGGGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: RAPDEWLGCHHV*WGGCGWSWGWR
Trigger: CCTCCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 72 bp CCAGAGAAGCTTCTCGGGTCAGCCAGGGGCCATGGCTaGCTCGCCTCTGCCAGGACACAAGGCGCCGGGCCA +
Preference number: 3 (lower is better)
Translates to: PEKLLGSARGHG*LASARTQGAGP
Trigger: TGGCCCGGCGCCTTGTGTCCTGGCAGAGGCGAGGCAGCCATGGCCCCTGGCTGACCCGAGAAGCTTCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp ACAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTaGAGGACCGGCATTGCCTACCACGTCCAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: TARRRENGHGPG*RTGIAYHVQPP
Trigger: GGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GCTCCTGACGAGTGGCTTGGCTGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCCTGGGGCTGGAGGACG +
Preference number: 3 (lower is better)
Translates to: APDEWLGCHHVC*GGCGWSWGWRT
Trigger: CGTCCTCCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CAA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTCCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 3 (lower is better)
Translates to: EQVQGETVAGPLAGESGPPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CAA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGGAATTGTGGGCAGTCTaGCCCTCGGCAGCACTGGGG +
Preference number: 3 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKELWAV*PSAALG
Trigger: CCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTC...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp CTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTaGTTCCAGCTCCGCTCCTGCCCCTCCAGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: LSGKEPPPRMAF*FQLRSCPSRCG
Trigger: CCCACACCTGGAGGGGCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGCCTGCCAGCCTGCAGT +
Preference number: 3 (lower is better)
Translates to: GRDSCWTSCWGE*PWSRRGLPACS
Trigger: ACTGCAGGCTGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR TCA 72 bp TCGTTCTTGCGAGTCTGGACCTGCCAGCTTGACCGCTaGCCTGGCCCGGGCCACAGGACTGACCACCCCAGC +
Preference number: 3 (lower is better)
Translates to: SFLRVWTCQLDR*PGPGHRTDHPS
Trigger: GCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGGTCCAGACTCGCAAGAACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp TCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGGCCATGGGGCTCAAGC +
Preference number: 3 (lower is better)
Translates to: SPWMDPSKRRPQ*TQPCTRPWGSS
Trigger: GCTTGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp CGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTaGTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: RTGPGRDSCWTS*WGEWPWSRRGL
Trigger: CAGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 72 bp TCCTGTGAGATCCCAGACACACAGGCAGTTGCTGGCTaGCCCGGGCCTCCCAGATGGGCACCTGAGGACCCC +
Preference number: 3 (lower is better)
Translates to: SCEIPDTQAVAG*PGPPRWAPEDP
Trigger: GGGGTCCTCAGGTGCCCATCTGGGAGGCCCGGGGCAGCCAGCAACTGCCTGTGTGTCTGGGATCTCACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GTGGAGCGTGCTGGCTGCGGAAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTG +
Preference number: 3 (lower is better)
Translates to: VERAGCGSAGSI*RAGRDEGHVEV
Trigger: CACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCACGCTCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GGGGCTGAGCCTGGCGGTGCGGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAAACTCCTGTGGTGGAG +
Preference number: 3 (lower is better)
Translates to: GAEPGGADGTAG*VVPTPQTPVVE
Trigger: CTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAGGCTCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp GCCGGGCTCATGCGAGGCTGTGATGCTGGAGGTCCTTaGCCTGCTCCTTGGGGGTCCACAGGGACTGGGACA +
Preference number: 3 (lower is better)
Translates to: AGLMRGCDAGGP*PAPWGSTGTGT
Trigger: TGTCCCAGTCCCTGTGGACCCCCAAGGAGCAGGCCAAGGACCTCCAGCATCACAGCCTCGCATGAGCCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 3 (lower is better)
Translates to: RSWARLQDRHCLPRPASHLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp AGCCTGGCGGTGCGGACGGTACTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTGTGGTGGAGCCTCTCC +
Preference number: 3 (lower is better)
Translates to: SLAVRTVLLGGW*LHHKLLWWSLS
Trigger: GGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp GTGAGCAGAGTGGGTCCTGAGGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: VSRVGPEASWLR*EQSRLQLRGSG
Trigger: CCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGC +
Preference number: 3 (lower is better)
Translates to: EPLRTGPGRDSC*TSCWGEWPWSR
Trigger: GCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp CTGAGCCTGGCGGTGCGGACGGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTCCTGTGGTGGAGCCTC +
Preference number: 3 (lower is better)
Translates to: LSLAVRTVLLGG*CLHHKLLWWSL
Trigger: GAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAGGCTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp AGCACTAGGCGCACCTCCCCTGCCGCACAGGAATTGTaGGCAGTCTTGCCCTCGGCAGCACTGGGGCTTGTG +
Preference number: 3 (lower is better)
Translates to: STRRTSPAAQEL*AVLPSAALGLV
Trigger: CACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGGGGAGGTGCGCCTAGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATaGCCTTCTGCTTCCAGCTCCGCTCCTGCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: AAFCLGRSPLPG*PSASSSAPAPP
Trigger: TGGAGGGGCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 3 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTCAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 3 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CAA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCCTGCCGCACAGGAATaGTGGGCAGTCTTGCCCTCG +
Preference number: 3 (lower is better)
Translates to: TPASSSCLGFSPRAELLRPAAQE*WAVLPS
Trigger: CGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGG...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCCCTGCCGCACAGGAATaGTGGGCAGTCTTGCCCTCG +
Preference number: 3 (lower is better)
Translates to: TWASCGLPGRPLLGKSQGPAAQE*WAVLPS
Trigger: CGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGG...GCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTGTGCAAAAAGAAAGGTaGGCTTCCCCGACTTCCCGC +
Preference number: 3 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPVQKER*ASPTSR
Trigger: GCGGGAAGTCGGGGAAGCCAACCTTTCTTTTTGCAC...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 72 bp GAGCACGGTCCACCTCCTGGTAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCACGGTGGGACGACCTT +
Preference number: 3 (lower is better)
Translates to: EHGPPPGRCALP*GPVPGSRWDDL
Trigger: AAGGTCGTCCCACCGTGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGAGGTGGACCGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR GCA 72 bp TCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCCCACTCTCCGTCTGTC +
Preference number: 3 (lower is better)
Translates to: SHYPWSPPDQSR*HAQLVPHSPSV
Trigger: GACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp GTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCT +
Preference number: 3 (lower is better)
Translates to: VEPLRTGPGRDS*WTSCWGEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 72 bp GCACCTCCCCTGCCGCACAGGAATTGTGGGCAGTCTTaGCCTCGGCAGCACTGGGGCTTGTGGCCATCTACA +
Preference number: 3 (lower is better)
Translates to: APPLPHRNCGQS*PRQHWGLWPST
Trigger: TGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGGGGAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp CTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGCAGGTGCCATGCACAG +
Preference number: 3 (lower is better)
Translates to: LPEPTEPRSHYP*SPPDQSRCHAQ
Trigger: CTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 3 (lower is better)
Translates to: LDGPVKEAASMHAALHQALDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACTGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACCTAATGGGAATGGCTTaGGGAAGTGCCCACATGCTC +
Preference number: 3 (lower is better)
Translates to: RSWARLQDRHCLPRPASHLMGMA*GSAHML
Trigger: GAGCATGTGGGCACTTCCCAAAGCCATTCCCATTAG...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCTCTCTGGGTCGTTCTaGCGAGTCTGGACCTGCCAG +
Preference number: 3 (lower is better)
Translates to: TPASSSCLGFSPRAELLRLSGSF*RVWTCQ
Trigger: CTGGCAGGTCCAGACTCGCAAGAACGACCCAGAGAG...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 3 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGARCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 3 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR TCA 72 bp GGGAATGGCTTTGGGAAGTGCCCACATGCTCACATCTaGGCCAGCACTAGGCGCACCTCCCCTGCCGCACAG +
Preference number: 3 (lower is better)
Translates to: GNGFGKCPHAHI*ASTRRTSPAAQ
Trigger: CTGTGCGGCAGGGGAGGTGCGCCTAGTGCTGGCTCAGATGTGAGCATGTGGGCACTTCCCAAAGCCATTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp CTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTCTCCGTCTGTCACCAA +
Preference number: 3 (lower is better)
Translates to: LPVEPTGSEQVP*TASPPLSVCHQ
Trigger: TTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp GACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCAAGCTCATGCTTGTCT +
Preference number: 3 (lower is better)
Translates to: DPSKRRPQCTQP*TRPWGSSSCLS
Trigger: AGACAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp CCGCCAGGTGCACCCCGTGTAGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: PPGAPRVVNQLL*CGQPIQLDLQL
Trigger: AAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTACTACACGGGGTGCACCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 72 bp AGCTGGTGCAGCTGCATGTCGTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCGGCTGTCATTTCCTGG +
Preference number: 3 (lower is better)
Translates to: SWCSCMSSRPWL*CSSLTPAVISW
Trigger: CCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGACATGCAGCTGCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp CAGAGCTGGGCTTGCACCACAAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: QSWACTTRGASV*QAQRLQTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGGCTTGGAAGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: EMGAESASAPGQ*GLWKPWLGRES
Trigger: GCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp CTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACA +
Preference number: 3 (lower is better)
Translates to: LLGGWCLHHKLL*WSLSEQVQGET
Trigger: TGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp GGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTaGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCA +
Preference number: 3 (lower is better)
Translates to: GVSELVAHMGFM*PAWPSPLGQVS
Trigger: TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVTVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: CSGHRAERLWPLSALGWATVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCAGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 3 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGTGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTTGTGGCCAGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: PHRNCGQSCPRQHWGLWPGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...TGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGAATTGTGGGCAGTCTaGCCCTCGGCAGCACTGGGG +
Preference number: 3 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSELWAV*PSAALG
Trigger: CCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGTGCAAAAAGAAAGGTaGGCTTCCCCGACTTCCCGC +
Preference number: 3 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLVQKER*ASPTSR
Trigger: GCGGGAAGTCGGGGAAGCCAACCTTTCTTTTTGCAC...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 72 bp ACAGTGAAGGGGGCAGTGGTGTTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAGTGCTCTGGGATGGGC +
Preference number: 3 (lower is better)
Translates to: TVKGAVVFRAQG*TIVASQCSGMG
Trigger: GCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTGCCCCCTTCACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR TCA 72 bp TCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTG +
Preference number: 3 (lower is better)
Translates to: SGFPEPGVGLDA*RVGTAVAVGGV
Trigger: CACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR GCA 72 bp GACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTTGGGGAGCTGACAGTG +
Preference number: 3 (lower is better)
Translates to: DCELRLGSSGSL*PSGLSLGELTV
Trigger: CACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp TGGTGCAGCTGCATGTCGTCCAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCTGTCATTTCCTGGATC +
Preference number: 3 (lower is better)
Translates to: WCSCMSSRPWLC*SSLTPAVISWI
Trigger: GATCCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGACATGCAGCTGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CCA 72 bp CCTCTTGGTGATGATCCACTGTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCG +
Preference number: 3 (lower is better)
Translates to: PLGDDPLWEVGV*LEVPPGMGRLP
Trigger: CGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATCACCAAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
3UTR CCA 72 bp TCCAGCTTCTTTCCCAGAAATGCCAGCTTCCCAACGTaGGGCCAGGGGAGGTCGTACAGCAGCTGCGGAGCA +
Preference number: 3 (lower is better)
Translates to: SSFFPRNASFPT*GQGRSYSSCGA
Trigger: TGCTCCGCAGCTGCTGTACGACCTCCCCTGGCCCCACGTTGGGAAGCTGGCATTTCTGGGAAAGAAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 72 bp CTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTT +
Preference number: 3 (lower is better)
Translates to: LGGWCLHHKLLW*SLSEQVQGETV
Trigger: AACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR-3UTR CAA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: QWCSGHRAERLWPLSALGTVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTTGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: GRLLLMEPVDLQGHVHRHGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...ATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CAA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCTAATGGGAATGGCTTaGGGAAGTGCCCACATGCTC +
Preference number: 3 (lower is better)
Translates to: TPASSSCLGFSPRAELLRLMGMA*GSAHML
Trigger: GAGCATGTGGGCACTTCCCAAAGCCATTCCCATTAG...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 72 bp GCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTaGCAGTGTGGGAAACTGCAGAGCTGTCTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: AACAHQDCLLGS*QCGKLQSCLSR
Trigger: CCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp CACGCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTaGCCTGTGGTCGCCCTGAAGCTCTGTTCTGGAAGT +
Preference number: 3 (lower is better)
Translates to: HALLQVAVVQVP*PVVALKLCSGS
Trigger: ACTTCCAGAACAGAGCTTCAGGGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR GCA 72 bp AAGAACGGCCTCCTATTTTATACGGGAGGAAACTGGTaGACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACC +
Preference number: 3 (lower is better)
Translates to: KNGLLFYTGGNW*TASALWPLVLT
Trigger: GGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 72 bp ATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGG +
Preference number: 3 (lower is better)
Translates to: MALWTLDSQTLN*LPETLRERAPG
Trigger: CCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp TGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCTCTCCAGGGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: CPSGLSLGELTV*ETAELSLQGLG
Trigger: GCCCAGACCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GTCAAGAACGGCCTCCTATTTTATACGGGAGGAAACTaGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTG +
Preference number: 3 (lower is better)
Translates to: VKNGLLFYTGGN*CTASALWPLVL
Trigger: CAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 72 bp CACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTaGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTG +
Preference number: 3 (lower is better)
Translates to: HRNCGQSCPRQH*GLWPSTERSLL
Trigger: CAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GCTCTGTTTCTCTTCCAGTCCCCACACCTCCCAGGTTaGGAGTACATGTCCGCCTCACCAGGTGACCTCTGG +
Preference number: 3 (lower is better)
Translates to: ALFLFQSPHLPG*EYMSASPGDLW
Trigger: CCAGAGGTCACCTGGTGAGGCGGACATGTACTCCCAACCTGGGAGGTGTGGGGACTGGAAGAGAAACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 3 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 3 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CAA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGATGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 3 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: SQTLNWLPETLRERAPGCLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GTGCCGTGCCCTGTGGTCGCCCTGAAGCTCTGTTCTGGAAGTAAGTCTCAGGATCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 3 (lower is better)
Translates to: VPCPVVALKLCSGSKSQDLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...ATCCTGAGACTTACTTCCAGAACAGAGCTTCAGGGCGACCACAGGGCACGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR-3UTR CAA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp GTCACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCATGGCTCTCTGGACACT +
Preference number: 3 (lower is better)
Translates to: VTFSPRLGWVTG*LRGQHHGSLDT
Trigger: AGTGTCCAGAGAGCCATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp CACGCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGACCCTTCCGTTTTCCAC +
Preference number: 3 (lower is better)
Translates to: HALLQVAVVQVP*PVVAYDPSVFH
Trigger: GTGGAAAACGGAAGGGTCATAAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
3UTR CCA 72 bp TCATGGTGGACACCACCTGCTGTGTCTCCCCAACACTaGTGTGTACCTTCCCTCATGGTCCATGGGACTGGG +
Preference number: 3 (lower is better)
Translates to: SWWTPPAVSPQH*CVPSLMVHGTG
Trigger: CCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAGCAGGTGGTGTCCACCATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 3 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCCACAGGGCTGAACGATaGTGGCCTCTCAGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCHRAER*WPLSAL
Trigger: CAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTG...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp TCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTaGTGTGTCTCCCCAACACTGGTGTGTACCTTCCCT +
Preference number: 3 (lower is better)
Translates to: SWLRPCFMVDTT*CVSPTLVCTFP
Trigger: AGGGAAGGTACACACCAGTGTTGGGGAGACACAGCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp GGAGCAGGCTTTCCTGGAGGAAGGATGAGCTTTGTCTaGAATTCTCCATCTTCCGTGAGGGAGGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: GAGFPGGRMSFV*NSPSSVREAGL
Trigger: CAGCCCAGCCTCCCTCACGGAAGATGGAGAATTCCAGACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTCACAGGGCTGAACGATaGTGGCCTCTCAGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLHRAER*WPLSAL
Trigger: CAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTG...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTGGAAAATAGCCGTATaGCCTAAAAGACCTCTGATC +
Preference number: 3 (lower is better)
Translates to: TPASSSCLGFSPRAELLRWKIAV*PKRPLI
Trigger: GATCAGAGGTCTTTTAGGCAATACGGCTATTTTCCA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCATTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATaGTCCATGGGACTGGGCTCTTGCTTCCAAGTTTCT +
Preference number: 3 (lower is better)
Translates to: LCLPNTGVYLPS*SMGLGSCFQVS
Trigger: AGAAACTTGGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR TCA 72 bp GGTGGATCACCTGAGGTCGGGAGTTTGAGACCAGCTTaGCCAACACAGAGAAACCCCGTCTCTACTTATGAC +
Preference number: 3 (lower is better)
Translates to: GGSPEVGSLRPA*PTQRNPVSTYD
Trigger: GTCATAAGTAGAGACGGGGTTTCTCTGTGTTGGTCAAGCTGGTCTCAAACTCCCGACCTCAGGTGATCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR GCA 72 bp AAGCCTGGACATGGGGAGTGTGCATGTATGGATGTGTaGATGTGTGTGTGTGCATGCGTGTGCATCTGTGTG +
Preference number: 3 (lower is better)
Translates to: KPGHGECACMDV*MCVCACVCICV
Trigger: CACACAGATGCACACGCATGCACACACACACATGCACACATCCATACATGCACACTCCCCATGTCCAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp AGGAGGCATCTGCTCGGGTTCTTTATTACACGTGCCTaGGGCACACACACGATTCCCTTTCACAGAAAGGAG +
Preference number: 3 (lower is better)
Translates to: RRHLLGFFITRA*GTHTIPFHRKE
Trigger: CTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp ATGGTATTTTCTACCCGGAGAACCCTGAGTGGGACGTaGTCTACAGCGTTCAAGAACATCTGCAAAGGCGGG +
Preference number: 3 (lower is better)
Translates to: MVFSTRRTLSGT*STAFKNICKGG
Trigger: CCCGCCTTTGCAGATGTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGTTCTCCGGGTAGAAAATACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 72 bp TCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATaGGACTGGGCTCTTGCTTCCAAGTTTCTTCAAAGG +
Preference number: 3 (lower is better)
Translates to: SPTLVCTFPHGP*DWALASKFLQR
Trigger: CCTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 3 (lower is better)
Translates to: LQRKKIVIAPERGKSIILRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp AAGCAGGAGGCATCTGCTCGGGTTCTTTATTACACGTaGCTGGGGCACACACACGATTCCCTTTCACAGAAA +
Preference number: 3 (lower is better)
Translates to: KQEASARVLYYT*LGHTHDSLSQK
Trigger: TTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
3UTR GCA 72 bp TGTGTGCATGTATGTGTGTGCATGCATGTGGATGTGTaGATGTGTGCATGTAGGTCTTGGCTCAGACCCTGC +
Preference number: 3 (lower is better)
Translates to: CVHVCVCMHVDV*MCACRSWLRPC
Trigger: GCAGGGTCTGAGCCAAGACCTACATGCACACATGCACACATCCACATGCATGCACACACATACATGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp CAGGCCGTCAATTACTGCAGATGGAGCAGGCTTTCCTaGAGGAAGGATGAGCTTTGTCTGGAATTCTCCATC +
Preference number: 3 (lower is better)
Translates to: QAVNYCRWSRLS*RKDELCLEFSI
Trigger: GATGGAGAATTCCAGACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCATCTGCAGTAATTGACGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp AAGAGCAGAGCTTCTCAGGCCGTCAATTACTGCAGATaGAGCAGGCTTTCCTGGAGGAAGGATGAGCTTTGT +
Preference number: 3 (lower is better)
Translates to: KSRASQAVNYCR*SRLSWRKDELC
Trigger: ACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCATCTGCAGTAATTGACGGCCTGAGAAGCTCTGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR-3UTR CAA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: LQRKKIVIAPERGKSIILLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp TCGACTCATGGTATTTTCTACCCGGAGAACCCTGAGTaGGACGTGGTCTACAGCGTTCAAGAACATCTGCAA +
Preference number: 3 (lower is better)
Translates to: STHGIFYPENPE*DVVYSVQEHLQ
Trigger: TTGCAGATGTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGTTCTCCGGGTAGAAAATACCATGAGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR TCA 72 bp CAATTCGACTCATGGTATTTTCTACCCGGAGAACCCTaGGTGGGACGTGGTCTACAGCGTTCAAGAACATCT +
Preference number: 3 (lower is better)
Translates to: QFDSWYFLPGEP*VGRGLQRSRTS
Trigger: AGATGTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGTTCTCCGGGTAGAAAATACCATGAGTCGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR CCA 72 bp CCTGGGGCTGCTTTCTGCCTTTTAACTCAGTGGACCTaGACTCTTAGCGTTTGGTGTAATTTAGGATCAGGT +
Preference number: 3 (lower is better)
Translates to: PGAAFCLLTQWT*TLSVWCNLGSG
Trigger: ACCTGATCCTAAATTACACCAAACGCTAAGAGTCCAGGTCCACTGAGTTAAAAGGCAGAAAGCAGCCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
3UTR GCA 72 bp GTGTACCTTCCCTCATGGTCCATGGGACTGGGCTCTTaGTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCAT +
Preference number: 3 (lower is better)
Translates to: VYLPSWSMGLGS*FQVSSKEEDSH
Trigger: ATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAAGGTACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CCA 72 bp TGCCTTTTAACTCAGTGGACCTGGACTCTTAGCGTTTaGTGTAATTTAGGATCAGGTCTGAGTGTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: CLLTQWTWTLSV*CNLGSGLSVGL
Trigger: AAGGCCCACACTCAGACCTGATCCTAAATTACACCAAACGCTAAGAGTCCAGGTCCACTGAGTTAAAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp CGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGTCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RHGPTPGARPGQPAARRQSPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...CTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp ATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGACGGCCAGCCGCAGTTaGTCCCGGCTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MGRLPVLAQVSLQRAGSQTASRS*SRLGSS
Trigger: GCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGT...CTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCAT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCATCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGPTPGARPGQPAARRQPSPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...TGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp GGTCTGCCGCCTCCCACACCCCACCCAGCAGGGAGAGCTGCGCCCTCAGACCCACCCAGGAGCAGGGTCTaGCGCCTCCCACACCCCACC +
Preference number: 4 (lower is better)
Translates to: GLPPPTPHPAGRAAPSDPPRSRV*RLPHPT
Trigger: GGTGGGGTGTGGGAGGCGGCAGACCCTGCTCCTGGG...TGGGTCTGAGGGCGCAGCTCTCCCTGCTGGGTGGGGTGTGGGAGGCGGCAGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: RHGPTPGARPGQPAARRQLGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...CTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR TCA 90 bp GCCTCCTTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGGGCCTGCCACGTTCGTaGTGTCAGGGCCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASLGLRPWRSRCRVGMCRGLPRS*CQGRAV
Trigger: CACTGCCCGGCCCTGACATCACGAACGTGGCAGGCC...CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp AAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KYLPAWADSRCSPRSACSWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...GCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp CGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGAGGAGGCCCCCACCTTaGCCAGCTTCTTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RHGPTPGARPGQPAARRQRRPPP*PASFLG
Trigger: CCCCAGGAAAGAAGCTGGGCAAGGTGGGGGCCTCCT...CTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp GCCTCCTTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGTGGGGAGAGTGGCCCTaGTCTCGCAGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASLGLRPWRSRCRVGMCRWGEWP*SRRGLP
Trigger: TGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCA...CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp AGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTGGCAGTGCTGGCTGCTaGCCCCACTGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SVARSTSRHGPTPGARPGGSAGC*PHCPGS
Trigger: GCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCC...ACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCACGACTGGCCTGTTCGTaGTGGAAGAGGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HGPTPGARPGQPAARRQPRLACS*WKRLAC
Trigger: GCAGGCCAGCCTCTTCCATCACGAACAGGCCAGTCG...TGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPRCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: GMGRLPVLAQVSLQRAGSRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...GCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp GCCTCCTTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGTGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASLGLRPWRSRCRVGMCRWRERQ*GQCWLL
Trigger: CAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCA...CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GGTCTGCCGCCTCCCACACCCCACCCAGCAGGGAGAGCTGCGCCCTCAGACCCATGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLPPPTPHPAGRAAPSDPCHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...TGGGTCTGAGGGCGCAGCTCTCCCTGCTGGGTGGGGTGTGGGAGGCGGCAGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGACGGCCTCGGCGCTCTaGCCTCTGGTCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLTASAL*PLVLTW
Trigger: CCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGT...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGACGGCCTCGGCGCTCTaGCCTCTGGTCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKTASAL*PLVLTW
Trigger: CCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGT...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCAGTCCAGGGCGCGGTaGAAGGTATGGCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RHGPTPGARPGQPAARRQQSRAR*KVWLSE
Trigger: CTCACTCAGCCATACCTTCCACCGCGCCCTGGACTG...CTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR TCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGGGCAGTGCTGGCTGCTaGCCCCACTGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLGSAGC*PHCPGS
Trigger: GCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCC...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCGGCAGTGCTGGCTGCTaGCCCCACTGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAGSAGC*PHCPGS
Trigger: GCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCC...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGAGCCCCCTCCCAGGATGGCCTTCTGCTTCCAGCTCCGCTCCTGCCCCTCCAGTGGGCCACGACGGGCTaGTGCTCGGCTTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: GAPSQDGLLLPAPLLPLQWATTG*CSAWEP
Trigger: TGGTTCCCAAGCCGAGCATCAGCCCGTCGTGGCCCA...CTGGAGGGGCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGGAGGGGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCACAGCTCGCCGCCGTaGGAACGGTCATGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAHSSPP*ERSWAR
Trigger: CCGGGCCCATGACCGTTCTCACGGCGGCGAGCTGTG...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCTCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGASPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGARCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCGTGTGCTGGGGTGGCTaGGGCTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAVCWGG*GWSWGW
Trigger: CCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACAC...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TACGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGTGTGCTGGGGTGGCTaGGGCTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YGRKLVHGLGALASGPDLVCWGG*GWSWGW
Trigger: CCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACAC...CAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCGTGTGCTGGGGTGGCTaGGGCTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPVCWGG*GWSWGW
Trigger: CCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACAC...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCT +
Preference number: 4 (lower is better)
Translates to: WGQCWLLTPLPGKLLLARRPWLC*SSLTPA
Trigger: AGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCT...CCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTCGGTGCGGACGGTACTaGTGGGTGGGTGGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPRCGRY*WVGGAY
Trigger: GTAGGCACCACCCACCCAGCAGTACCGTCCGCACCG...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGTGCAGCAGGTGCCTaGACCGCCAGGTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPGAAGA*TARCTP
Trigger: CGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCACC...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSRRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQARRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTAGGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCTGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VGVWLEVPPGMGRLPVLAWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...GGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCCTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GCCTCCTTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ASLGLRPWRSRCRVGMCRGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GGTCTGCCGCCTCCCACACCCCACCCAGCAGGGAGAGCTGCGCCCTCAGACCCAGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GLPPPTPHPAGRAAPSDPGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...TGGGTCTGAGGGCGCAGCTCTCCCTGCTGGGTGGGGTGTGGGAGGCGGCAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RSWARLQDRHCLPRPASHSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCCTCCTTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ASLGLRPWRSRCRVGMCRTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGCAGTGCTGGCTGCTaGCCCCACTGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGSAGC*PHCPGS
Trigger: GCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGGCAGTGCTGGCTGCTaGCCCCACTGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYGSAGC*PHCPGS
Trigger: GCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCATGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: HGPTPGARPGQPAARRQPCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...TGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp GTAGGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VGVWLEVPPGMGRLPVLAGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...GGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGGGCCTGCCACGTTCGTaGTGTCAGGGCCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLGLPRS*CQGRAV
Trigger: CACTGCCCGGCCCTGACATCACGAACGTGGCAGGCC...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR TCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGGCGTGTGGCGAAGGTaGCTGGCAGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSGVWRR*LAGEAW
Trigger: CCAGGCTTCCCCTGCCAGTCACCTTCGCCACACGCC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCCCCTCCAGGTGTGGGTaGCGTGGAAGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAPSRCG*RGRGLW
Trigger: CCACAGCCCCCTTCCACGTCACCCACACCTGGAGGG...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCTGGACCTGCCAGCTTaGCCGCTGACCTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: CFNTGKREPATPCPGPPCLDLPA*PLTWPG
Trigger: CCCGGGCCAGGTCAGCGGTCAAGCTGGCAGGTCCAG...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCTCCCAGATGGGCACCTaGGGACCCCGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQASQMGT*GPRPPP
Trigger: AGGAGGAGGCCGGGGTCCTCAGGTGCCCATCTGGGA...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCTCCCAGATGGGCACCTaGGGACCCCGGCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPSQMGT*GPRPPP
Trigger: AGGAGGAGGCCGGGGTCCTCAGGTGCCCATCTGGGA...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCAACGGCCAGCCGCAGTTaGTCCCGGCTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSTASRS*SRLGSS
Trigger: GCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGT...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCAACCAGCTTCTGTGCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GSKYLPAWADSRCSPRSANQLLC*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTT...GGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTGTGCTGGGGTGGCTaGGGCTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVCWGG*GWSWGW
Trigger: CCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCCGGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PASSSCLGFSPRAELLRPGCHHV*WGGCGW
Trigger: CCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC...CGGCCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGCTCCGCCAGCTGGGCTaGACCAGCCCAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLLRQLG*TSPTPA
Trigger: GGCTGGGGTTGGGCTGGTGCAGCCCAGCTGGCGGAG...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGCGGGCACACCTGCTTaGAGCCTCAGGGCTCACCAC +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPAGTPA*SLRAHH
Trigger: GTGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGC...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp CATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGCGTTCAAGAACATCTaGAAAGGCGGGCTTCGGGCG +
Preference number: 4 (lower is better)
Translates to: HGPTPGARPGQPAARRQPAFKNI*KGGLRA
Trigger: CGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGC...TGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCCCCCGCAGCAGCAATaGAGGTTCCGGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CFNTGKREPATPCPGPPCPPQQQ*RFRGPA
Trigger: CGCTGGGCCCCGGAACCTGCATTGCTGCTGCGGGGG...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGTGCAGCAGGTGCCTaGACCGCCAGGTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGAAGA*TARCTP
Trigger: CGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCACC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCCGGGAAGCTCCTGCTaGCCAGGTCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPPGSSC*PGPAPA
Trigger: AGCTGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTGCCGGGAAGCTCCTGCTaGCCAGGTCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GGNWCTASALWPLVLTWVPGSSC*PGPAPA
Trigger: AGCTGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGG...CACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCACAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSQWGQC*LLTPLP
Trigger: GGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTG...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: PASLTADLARATGLTTPAFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCATGGGGAGAGTGGCCCTaGTCTCGCAGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPWGEWP*SRRGLP
Trigger: TGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCA...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCTGGGGAGAGTGGCCCTaGTCTCGCAGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAWGEWP*SRRGLP
Trigger: TGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCA...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PASLTADLARATGLTTPACWTSC*GEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCA...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: AWADSRCSPRSACSAQAAHKLLW*SLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTG...GGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAA +
Preference number: 4 (lower is better)
Translates to: HGPTPGARPGQPAARRQPDGTAG*VVPTPQ
Trigger: TTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTC...TGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCCGGCTTGGGAGCTCTaGCAGCCTGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPPAWEL*QPVPIR
Trigger: CCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCCCTCCTCCTCCTGCTTaGGGTTCAGCCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PASLTADLARATGLTTPAPPPPA*GSAQEQ
Trigger: CTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGG...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCCCCGGGCCTCCCAGATaGGCACCTGAGGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSPGPPR*APEDPG
Trigger: GCCGGGGTCCTCAGGTGCCCATCTGGGAGGCCCGGG...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGGGGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: WGWRTAPSHGARGPPRARPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...ACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp GCAGTGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGAVLAADPTAREAPAGHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...GCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp GGTCTGCCGCCTCCCACACCCCACCCAGCAGGGAGAGCTGCGCCCTCAGACCCATTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLPPPTPHPAGRAAPSDPFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...TGGGTCTGAGGGCGCAGCTCTCCCTGCTGGGTGGGGTGTGGGAGGCGGCAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGCCTGCCACGTTCGTaGTGTCAGGGCCGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRGLPRS*CQGRAV
Trigger: CACTGCCCGGCCCTGACATCACGAACGTGGCAGGCC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR GCA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RSWARLQDRHCLPRPASHLLLTA*RPLRTG
Trigger: CCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAG...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCGTCCAGGCCATGGCTGTGCTGCTCCTCACTGACCCCGGCTGTCATTTCCTGGACGGCCAGCCGCAGTTaGTCCCGGCTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSRPWLCCSSLTPAVISWTASRS*SRLGSS
Trigger: GCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGT...CCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp TGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: WGQCWLLTPLPGKLLLARATLHT*WKSSRP
Trigger: TGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGC...CCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp TCGTCCAGGCCATGGCTGTGCTGCTCCTCACTGACCCCGGCTGTCATTTCCTGGTCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSRPWLCCSSLTPAVISWSPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...CCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQESPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGGATGTAGTCAATCCCCCTTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LALTVQGRHVPEDVVNPPWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...AGGGGGATTGACTACATCCTCCGGCACATGCCTACCCTGCACCGTGAGCGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGCAGGTGCAGCAGGTaGCTGGACCGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSSRCSR*LDRQVH
Trigger: GTGCACCTGGCGGTCCAGGCACCTGCTGCACCTGCT...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAAGCAGGTGCAGCAGGTaGCTGGACCGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPSRCSR*LDRQVH
Trigger: GTGCACCTGGCGGTCCAGGCACCTGCTGCACCTGCT...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGCHHV*WGGCGW
Trigger: CCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGATTTCCTGGATCTGGTaGACGGCCTCGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GVWLEVPPGMGRLPVLAQISWIW*TASALW
Trigger: CCAGAGCGCCGAGGCCGTGCACCAGATCCAGGAAAT...CTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCGCCAGCTGGTGCAGCTaGATGTCGTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPASWCS*MSSRPW
Trigger: CCATGGCCTGGACGACATGCAGCTGCACCAGCTGGC...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCTGCAGGGCCAGCTGGTaGAGCTGCATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCCRASW*SCMSSR
Trigger: CCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCACGGTGCGGACGGTACTaGTGGGTGGGTGGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPRCGRY*WVGGAY
Trigger: GTAGGCACCACCCACCCAGCAGTACCGTCCGCACCG...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCATGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPQCTQP*TRPWGS
Trigger: TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACACCCAGCGTCTGGTaGGTGTCCCTGTTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCTPSVW*VSLFPA
Trigger: CGCCGGAAACAGGGACACGCACCAGACGCTGGGTGT...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCCAGGGGCCATGGCTaGCTCGCCTCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGARGHG*LASART
Trigger: TGTCCTGGCAGAGGCGAGGCAGCCATGGCCCCTGGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTGGGCTTCATGTGGCCTaGCTGGCCGTCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAGLHVA*LAVPSW
Trigger: CCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCC...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGCCTCCCCCACCGGCCTaGCTCATGCCACCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PRQHWGLWPSTERSLLWPPPPPA*LMPPEG
Trigger: GCCTTCAGGTGGCATGAGGCAGGCCGGTGGGGGAGG...CGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCCCCAGCCGGGCTCATaGGAGGCTGTGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPPQPGS*EAVMLE
Trigger: CTCCAGCATCACAGCCTCGCATGAGCCCGGCTGGGG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCCCCCCGCAGCAGCAATaGAGGTTCCGGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTPPQQQ*RFRGPA
Trigger: CGCTGGGCCCCGGAACCTGCATTGCTGCTGCGGGGG...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTGGTCATGGGCCCGGCTaGAGGACCGGCATTGCCTAC +
Preference number: 4 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPGHGPG*RTGIAY
Trigger: GTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACC...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAGCCATGGGTCGCAGGTaGGTGCTCAGCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSAMGRR*VLSTSQ
Trigger: CTGGGAGGTGCTGAGCACCCACCTGCGACCCATGGC...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283309.10
CDS-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGGCCCTCCCCCGCCATaGGTCGCAGGTGGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHGPPPP*VAGGCS
Trigger: TGAGCACCCACCTGCGACCCATGGCGGGGGAGGGCC...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283309.10
CDS-3UTR CCA 90 bp ACGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCGCAGTTGCTCCCGGCTaGGCAGCAGCACGAGGACAT +
Preference number: 4 (lower is better)
Translates to: TCRNCRGCRRSGVRGSGGAVAPG*AAARGH
Trigger: ATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGC...GCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAGTTCCTACACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: KYLPAWADSRCSPRSACSRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...GCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp CGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTACCACGTCCAGCCTCCCACAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RSWARLQDRHCLPRPASHRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...GTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: AWADSRCSPRSACSAQAAGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...GGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GRLLLMEPVDLQGHVHRHRRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...ATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp TCCTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SLCSLKKCTGTSSSRQASAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...GGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTCCGGGAAGCTCCTGCTaGCCAGGTCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPPGSSC*PGPAPA
Trigger: AGCTGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGG...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGQWGQC*LLTPLP
Trigger: GGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCTGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAWRERQ*GQCWLL
Trigger: CAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCA...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCATGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSWRERQ*GQCWLL
Trigger: CAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCA...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCTGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPWRERQ*GQCWLL
Trigger: CAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCA...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGCGGTGCGGACGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LAVRTVLLGGWCLHHKLLWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGTGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRQHWGLWPSTERSLLWPWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...CGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGACGGCCTCGGCGCTCTaGCCTCTGGTCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGTASAL*PLVLTW
Trigger: CCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGCGGTGCGGACGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGACGGCCTCGGCGCTCTaGCCTCTGGTCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: LAVRTVLLGGWCLHHKLLTASAL*PLVLTW
Trigger: CCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGT...CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCATGTCGTCCAGGCCATaGCTGTGCTGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: GSKYLPAWADSRCSPRSAMSSRP*LCCSSL
Trigger: CAGTGAGGAGCAGCACAGCCATGGCCTGGACGACAT...GGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGGGGAGAGTGGCCCTaGTCTCGCAGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGWGEWP*SRRGLP
Trigger: TGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLGRDSC*TSCWGE
Trigger: CTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCTGCGGACGGTACTGCTaGGTGGGTGGTGCCTACACC +
Preference number: 4 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCCGRYC*VGGAYT
Trigger: GGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCA...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTGAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: GGNWCTASALWPLVLTWVSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...CACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCCGGCTTGGGAGCTCTaGCAGCCTGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLPAWEL*QPVPIR
Trigger: CCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCACCGGCTTGGGAGCTCTaGCAGCCTGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPPAWEL*QPVPIR
Trigger: CCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGG...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCCGGCTTGGGAGCTCTaGCAGCCTGTGCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSPAWEL*QPVPIR
Trigger: CCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGCAGGGAGGTGCCGCTaGCTGTCCTGTCTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPAGRCR*LSCLPS
Trigger: ACTGGGAAGACAGGACAGCCAGCGGCACCTCCCTGC...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGTATACGGGAGGAAACTaGTGCACGGCCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLYTGGN*CTASAL
Trigger: GAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTATA...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGCTGGCAGGGGAAGCCTaGACATGGGGAGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKLAGEA*TWGVCM
Trigger: CATGCACACTCCCCATGTCCAGGCTTCCCCTGCCAG...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCTGCCCCTCCAGGTGTaGGTGACGTGGAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLLPLQV*VTWKGA
Trigger: AGCCCCCTTCCACGTCACCCACACCTGGAGGGGCAG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp CCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PNRSRARQLLDL*LGRVALVSQGP
Trigger: AGGCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
3UTR CAA 72 bp GTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATaGCCTACCACGTCCAGCCTCCCACTGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VRTVMGPAAGPA*PTTSSLPLPAL
Trigger: CAGAGCTGGCAGTGGGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCGGCAGGCCTCCTGGATaGAGCACAGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAGRPPG*STAWPP
Trigger: AGGAGGCCATGCTGTGCTTCATCCAGGAGGCCTGCC...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTATCCTTGTGCAGCCTaGAGAAGTGCACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: GSKYLPAWADSRCSPRSAYPCAA*RSARAR
Trigger: ACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATA...GGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPVGLDA*RVGTAV
Trigger: CACGGCAGTTCCTACACGTCAGGCATCAAGGCCAAC...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCAGGTGGAAGGTATGGCTaGGTGAGGTGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GWRTAPSHGARGPPRARPGGRYG*VRWALG
Trigger: ACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC...TGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCGGTGGAAGGTATGGCTaGGTGAGGTGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAGGRYG*VRWALG
Trigger: ACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCTGCGACTGGCCTGTTCGTaGTGGAAGAGGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LVQPEEVHGHVLQPAGLLRLACS*WKRLAC
Trigger: GCAGGCCAGCCTCTTCCATCACGAACAGGCCAGTCG...CAGGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGCCCTCCAGGTGTGGGTaGCGTGGAAGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEPSRCG*RGRGLW
Trigger: CCACAGCCCCCTTCCACGTCACCCACACCTGGAGGG...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAGCTCATGCGAGGCTGTaGTGCTGGAGGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSAHARL*CWRSLA
Trigger: GGCCAAGGACCTCCAGCATCACAGCCTCGCATGAGC...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGGCTGGGCTGATGGCTaGGGGCCCAGAGGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSGWADG*GPRGVH
Trigger: ATGGACTCCTCTGGGCCCTCAGCCATCAGCCCAGCC...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCGTGACGGATGAACCCTaGGTGGAAGGGGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPVTDEP*VEGAAC
Trigger: ACAGGCGGCCCCTTCCACTCAGGGTTCATCCGTCAC...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGTCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVSPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GVWLEVPPGMGRLPVLAQVNQLL*CGQPIQ
Trigger: CTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC...CTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAGCAGGTGCAGCAGGTaGCTGGACCGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSRCSR*LDRQVH
Trigger: GTGCACCTGGCGGTCCAGGCACCTGCTGCACCTGCT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHRCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCRCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGCCCGGGAAGCTCCTaGTGGCCAGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCPGSS*WPGPAP
Trigger: TGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGGGCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGCCAGCTGGTGCAGCTaGATGTCGTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPASWCS*MSSRPW
Trigger: CCATGGCCTGGACGACATGCAGCTGCACCAGCTGGC...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPPGRDS*WTSCWG
Trigger: TCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTGCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GGNWCTASALWPLVLTWVPGRDS*WTSCWG
Trigger: TCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGG...CACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCGGTGCGGACGGTACTaGTGGGTGGGTGGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRCGRY*WVGGAY
Trigger: GTAGGCACCACCCACCCAGCAGTACCGTCCGCACCG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: WGQCWLLTPLPGKLLLARSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...CCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACACTCCGCCAGCTGGGCTaGACCAGCCCAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTLRQLG*TSPTPA
Trigger: GGCTGGGGTTGGGCTGGTGCAGCCCAGCTGGCGGAG...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TACGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGCAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: YGRKLVHGLGALASGPDLQCTQP*TRPWGS
Trigger: TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG...CAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTGGCCCGGCCTTTGCTaGCCCTGGGGTCTATGGCGT +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRWPGLC*PWGLWR
Trigger: ACGCCATAGACCCCAGGGGCAGCAAAGGCCGGGCCA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGAGCCTTAGGGGAGTCTaGCCCGGCCCCGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVSLRGV*PGPGWV
Trigger: CACCCAGCCGGGGCCGGGGCAGACTCCCCTAAGGCT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCCCCAGGATGGCCTTCTaGTTCCAGCTCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSPRMAF*FQLRSC
Trigger: GCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGG...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGCCCCAGCCGGGCTCATaGGAGGCTGTGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRQHWGLWPSTERSLLWPPQPGS*EAVMLE
Trigger: CTCCAGCATCACAGCCTCGCATGAGCCCGGCTGGGG...CGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GVWLEVPPGMGRLPVLAQWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...CTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLLGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGLGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRLGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGTCCCAGGATCACGGTaGGACGACCTTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: HGPTPGARPGQPAARRQPVPGSR*DDLPSY
Trigger: ATAAGAAGGAAGGTCGTCCCACCGTGATCCTGGGAC...TGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWARRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCGGGAAGCTCCTGCTaGCCAGGTCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPGSSC*PGPAPA
Trigger: AGCTGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGWRERQ*GQCWLL
Trigger: CAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: TCRNCRGCRRSGVRGSGGFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...GCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAGTTCCTACACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGGTGCAGGGCCAGCTaGTGCAGCTGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGCRAS*CSCMSS
Trigger: GGACGACATGCAGCTGCACCAGCTGGCCCTGCACCC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCAGGAAGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTGGGTGCAGGGCCAGCTaGTGCAGCTGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: AGSRLPPGERTVTSARAPGCRAS*CSCMSS
Trigger: GGACGACATGCAGCTGCACCAGCTGGCCCTGCACCC...AGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACTTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTGGGTGCAGGGCCAGCTaGTGCAGCTGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: CFNTGKREPATPCPGPPCGCRAS*CSCMSS
Trigger: GGACGACATGCAGCTGCACCAGCTGGCCCTGCACCC...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCGCGCGGTGGAAGGTATaGCTGAGTGAGGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSARWKV*LSEVGA
Trigger: AGCGCCCACCTCACTCAGCCATACCTTCCACCGCGC...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCGCGCGGTGGAAGGTATaGCTGAGTGAGGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SLCSLKKCTGTSSSRQASARWKV*LSEVGA
Trigger: AGCGCCCACCTCACTCAGCCATACCTTCCACCGCGC...GGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRQHWGLWPSTERSLLWPSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...CGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTGCGGACGGTACTGCTaGGTGGGTGGTGCCTACACC +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSCGRYC*VGGAYT
Trigger: GGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCA...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: RDSCWTSCWGEWPWSRRGSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCCCCTGCACCAGGCCATaGGGCTCAAGCTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPPCTRP*GSSSCL
Trigger: CAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGG...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTGAGGGTCCCCCTGGATaGACCCGTCAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: CFNTGKREPATPCPGPPCEGPPG*TRQRGG
Trigger: GCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTC...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCCAGCTTCCCAACGTaGGGCCAGGGGAGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGASFPT*GQGRSY
Trigger: GTACGACCTCCCCTGGCCCCACGTTGGGAAGCTGGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336070.11
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGCCAGCTTCCCAACGTaGGGCCAGGGGAGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRASFPT*GQGRSY
Trigger: GTACGACCTCCCCTGGCCCCACGTTGGGAAGCTGGC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGGGCGAGGTGTCCTCTaGGGGTGGTCGGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYGRGVL*GWSDGS
Trigger: ACTGCCATCCGACCACCCCCAGAGGACACCTCGCCC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGGGCCTTTGCTGCCCCTaGGGTCTATGGCGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRGLCCP*GLWRVA
Trigger: CGCCACACGCCATAGACCCCAGGGGCAGCAAAGGCC...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCCCACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAAAGTTAGGGGTGGGCTaGCCCGGCCTTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AHMGFMWPAWPSPLGQVSKLGVG*PGLCCP
Trigger: GGGGCAGCAAAGGCCGGGCCAGCCCACCCCTAACTT...TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGCCACACCTCCCAGGTTaGGAGTACATGTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKPHLPG*EYMSAS
Trigger: TGAGGCGGACATGTACTCCCAACCTGGGAGGTGTGG...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp CGCACCTCCCCTGCCGCACAGGAATTGTGGGCAGTCTaGCCCTCGGCAGCACTGGGGCTTGTGGCCATCTAC +
Preference number: 4 (lower is better)
Translates to: RTSPAAQELWAV*PSAALGLVAIY
Trigger: GTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGGGGAGGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp TCTCTGGGTCGTTCTTGCGAGTCTGGACCTGCCAGCTaGACCGCTGACCTGGCCCGGGCCACAGGACTGACC +
Preference number: 4 (lower is better)
Translates to: SLGRSCESGPAS*TADLARATGLT
Trigger: GGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGGTCCAGACTCGCAAGAACGACCCAGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGCAGGCCTCCTGGATaGAGCACAGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGRPPG*STAWPP
Trigger: AGGAGGCCATGCTGTGCTTCATCCAGGAGGCCTGCC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGCAGTGCTGGCTGCTaGCCCCACTGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSGSAGC*PHCPGS
Trigger: GCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGGGTGCAGGGCTCCTaGCGAGTGGCTTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGWVQGS*RVAWLS
Trigger: TGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTGGGTGCAGGGCTCCTaGCGAGTGGCTTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRWVQGS*RVAWLS
Trigger: TGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGTGGAAGGTATGGCTaGGTGAGGTGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGGRYG*VRWALG
Trigger: ACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGGTGGAAGGTATGGCTaGGTGAGGTGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYGGRYG*VRWALG
Trigger: ACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: SVARSTSRHGPTPGARPGLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...ACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TACGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: YGRKLVHGLGALASGPDLEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...CAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp ATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGAGTTTGAGACCAGCTTaGCCAACACAGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: MGRLPVLAQVSLQRAGSQSLRPA*PTQRNP
Trigger: GGGGTTTCTCTGTGTTGGTCAAGCTGGTCTCAAACT...CTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp TGGGGGCAGTGCTGGCTGCTGACCCCACTGCCCGGGAAGCTCCTGCTGGCCAGGTACATCGCGCCCCTCTaGATGTCTTGTCTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: WGQCWLLTPLPGKLLLARYIAPL*MSCLLD
Trigger: GTCGAGAAGACAAGACATTCAGAGGGGCGCGATGTA...CCTGGCCAGCAGGAGCTTCCCGGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCTACCCGGAGAACCCTaGGTGGGACGTGGTCTACAG +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSLPGEP*VGRGLQ
Trigger: CTGTAGACCACGTCCCACTCAGGGTTCTCCGGGTAG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTGTGGCCGATGCCCCTaGGTGAGTTACAGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSCGRCP*VSYSRH
Trigger: ATGCCGGCTGTAACTCACTCAGGGGCATCGGCCACA...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCCCGGCTGGGTGTGTCTaGGCTGGTAGCCCACATGGG +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTPAGCV*AGSPHG
Trigger: CCCATGTGGGCTACCAGCTCAGACACACCCAGCCGG...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTTGTGGCCAGCTCATGCGAGGCTGTaGTGCTGGAGGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PHRNCGQSCPRQHWGLWPAHARL*CWRSLA
Trigger: GGCCAAGGACCTCCAGCATCACAGCCTCGCATGAGC...TGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCCTGGACCTGCCAGCTTaGCCGCTGACCTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGLDLPA*PLTWPG
Trigger: CCCGGGCCAGGTCAGCGGTCAAGCTGGCAGGTCCAG...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACTGGGCCACGACGGGCTaGTGCTCGGCTTGGGAACCA +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDWATTG*CSAWEP
Trigger: TGGTTCCCAAGCCGAGCATCAGCCCGTCGTGGCCCA...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCACTGATAAACCTTTGTaGATGCACTCGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: PASLTADLARATGLTTPATDKPL*MHSQGR
Trigger: GCGGCCCTGCGAGTGCATTCACAAAGGTTTATCAGT...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCTGGCCATCCTGTCCTaGGACTCCCTGCTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPLAILS*DSLLLL
Trigger: TAGGAGCAGCAGGGAGTCTCAGGACAGGATGGCCAG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCTGGCCATCCTGTCCTaGGACTCCCTGCTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLLAILS*DSLLLL
Trigger: TAGGAGCAGCAGGGAGTCTCAGGACAGGATGGCCAG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACACAGCTCGCCGCCGTaGGAACGGTCATGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGHSSPP*ERSWAR
Trigger: CCGGGCCCATGACCGTTCTCACGGCGGCGAGCTGTG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SLCSLKKCTGTSSSRQASLLLTA*RPLRTG
Trigger: CCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAG...GGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAACGGCCAGCCGCAGTTaGTCCCGGCTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGTASRS*SRLGSS
Trigger: GCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGT...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTAACGGCCAGCCGCAGTTaGTCCCGGCTGGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLTASRS*SRLGSS
Trigger: GCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGT...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: TCRNCRGCRRSGVRGSGGATLHT*WKSSRP
Trigger: TGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGC...GCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAGTTCCTACACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp GCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTGCCCTGTGGTCGCTTATGACTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALLQVAVVQVPCPVVAYDWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...GTCATAAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGCCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCAACCAGCTTCTGTGCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSNQLLC*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTT...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCGCCTGGACCGCCAGGTaGACCCCGTGTAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAAWTAR*TPCSKP
Trigger: TGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGC...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACAGCAGGTGCAGCAGGTaGCTGGACCGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDSRCSR*LDRQVH
Trigger: GTGCACCTGGCGGTCCAGGCACCTGCTGCACCTGCT...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: LHSEEGHEGGSGFLISLLRCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...AAGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGTGTGCTGGGGTGGCTaGGGCTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNVCWGG*GWSWGW
Trigger: CCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACAC...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCGTGTGCTGGGGTGGCTaGGGCTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGVCWGG*GWSWGW
Trigger: CCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACAC...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCGCHHV*WGGCGW
Trigger: CCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAGCHHV*WGGCGW
Trigger: CCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAATTTCCTGGATCTGGTaGACGGCCTCGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPISWIW*TASALW
Trigger: CCAGAGCGCCGAGGCCGTGCACCAGATCCAGGAAAT...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCATTTCCTGGATCTGGTaGACGGCCTCGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSISWIW*TASALW
Trigger: CCAGAGCGCCGAGGCCGTGCACCAGATCCAGGAAAT...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRPWLC*SSLTPA
Trigger: AGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PRQHWGLWPSTERSLLWPRPWLC*SSLTPA
Trigger: AGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCT...CGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSRPWL*CSSLTP
Trigger: CGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCCAGCTGGTGCAGCTaGATGTCGTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGASWCS*MSSRPW
Trigger: CCATGGCCTGGACGACATGCAGCTGCACCAGCTGGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGCAGGGCCAGCTGGTaGAGCTGCATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCRASW*SCMSSR
Trigger: CCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTGCAGGGCCAGCTGGTaGAGCTGCATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRCRASW*SCMSSR
Trigger: CCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSPGRDS*WTSCWG
Trigger: TCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPLLGGW*LHHKLL
Trigger: CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCGTCCAGGCCATGGCTGTGCTGCTCCTCACTGACCCCGGCTGTCATTTCCTGGTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SSRPWLCCSSLTPAVISWCWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...CCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp GGTCTGCCGCCTCCCACACCCCACCCAGCAGGGAGAGCTGCGCCCTCAGACCCACAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: GLPPPTPHPAGRAAPSDPQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...TGGGTCTGAGGGCGCAGCTCTCCCTGCTGGGTGGGGTGTGGGAGGCGGCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCTCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: TCRNCRGCRRSGVRGSGGSEQVP*TASPPL
Trigger: GAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGA...GCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAGTTCCTACACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCACCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTTCGGGCGGGCACACCTaGTTGCAGCCTCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EQVQGETVAGPLAGESGPSGGHT*LQPQGS
Trigger: TGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCCCGA...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTTGGCTGCCTCGCCTCTaGCAGGACACAAGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVWLPRL*QDTRRR
Trigger: CCGGCGCCTTGTGTCCTGGCAGAGGCGAGGCAGCCA...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTGTACACAGCGGCTTCTaGTGTTTGCAGGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGAVHSGF*CLQATP
Trigger: GGGGGTGGCCTGCAAACAGCAGAAGCCGCTGTGTAC...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCACACCGGCCTGCCTCATaGCACCTGAAGGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSHRPAS*HLKATS
Trigger: GCTTGTGGCCTTCAGGTGGCATGAGGCAGGCCGGTG...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGGCCTCCTCCTCCTaGTTGGGGTTCAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYPASSS*LGFSPR
Trigger: TCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGG...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGCAGGCAGTTGCTGGCTaGCCCGGGCCTCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQQAVAG*PGPPRW
Trigger: CCATCTGGGAGGCCCGGGGCAGCCAGCAACTGCCTG...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCAGGCCTCTCAGGACTaGGTTCCATACATCGCGCCC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSQASQD*VPYIAP
Trigger: GGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTTCTTTCCCAGAAATGCCAGGGTGCAGCAGGTGCCTaGACCGCCAGGTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: CCGQPIQLDLQLLSQKCQGAAGA*TARCTP
Trigger: CGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCACC...CTGGCATTTCTGGGAAAGAAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGGTGCAGCAGGTGCCTaGACCGCCAGGTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVGAAGA*TARCTP
Trigger: CGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCACC...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTCGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MEPVDLQGHVHRHLSGFPRRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...AGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCCGGGAAGCTCCTGCTaGCCAGGTCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDPGSSC*PGPAPA
Trigger: AGCTGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGG...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVQWGQC*LLTPLP
Trigger: GGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAQWGQC*LLTPLP
Trigger: GGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGTGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCTGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSCHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGACGGCCTCGGCGCTCTaGCCTCTGGTCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWTASAL*PLVLTW
Trigger: CCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGT...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGACGGCCTCGGCGCTCTaGCCTCTGGTCCTGACCTGG +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGTASAL*PLVLTW
Trigger: CCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGT...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCCCGGCTGTCATTTCCTaGATCTGGTGCACGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAPAVIS*IWCTAS
Trigger: CGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGG...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCACCGGCTGTCATTTCCTaGATCTGGTGCACGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPPAVIS*IWCTAS
Trigger: CGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGG...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCCGGCTGTCATTTCCTaGATCTGGTGCACGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAPAVIS*IWCTAS
Trigger: CGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGGGTGCAGGGCCAGCTaGTGCAGCTGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDGCRAS*CSCMSS
Trigger: GGACGACATGCAGCTGCACCAGCTGGCCCTGCACCC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCGCGGTGGAAGGTATaGCTGAGTGAGGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGARWKV*LSEVGA
Trigger: AGCGCCCACCTCACTCAGCCATACCTTCCACCGCGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCCAGTCCAGGGCGCGGTaGAAGGTATGGCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SLCSLKKCTGTSSSRQASQSRAR*KVWLSE
Trigger: CTCACTCAGCCATACCTTCCACCGCGCCCTGGACTG...GGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSGRDSC*TSCWGE
Trigger: CTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTC +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKVLLGG*CLHHKL
Trigger: GAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTAC...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGCGGACGGTACTGCTaGGTGGGTGGTGCCTACACC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCGRYC*VGGAYT
Trigger: GGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTGCGGACGGTACTGCTaGGTGGGTGGTGCCTACACC +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRCGRYC*VGGAYT
Trigger: GGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCTGCGGACGGTACTGCTaGGTGGGTGGTGCCTACACC +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSCGRYC*VGGAYT
Trigger: GGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCA...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGCGGTGCGGACGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LAVRTVLLGGWCLHHKLLTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCACCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCAGAGGGGTTCAGGTCTaGGAGGAACCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSRGVQV*EEPGSC
Trigger: GCAGGACCCAGGTTCCTCCCAGACCTGAACCCCTCT...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGAGGGGTTCAGGTCTaGGAGGAACCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSRGVQV*EEPGSC
Trigger: GCAGGACCCAGGTTCCTCCCAGACCTGAACCCCTCT...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYRGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCTGGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LVQPEEVHGHVLQPAGLLGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...CAGGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRSAPGQ*GLWKPW
Trigger: CCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGAGACCCTACCCTGGTaGCCTTCCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPETLPW*PSRAHR
Trigger: TCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTC...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCGAGACCCTACCCTGGTaGCCTTCCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSETLPW*PSRAHR
Trigger: TCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTC...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPRAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGAGGAAACTGGTGCACGGCCTCGGCGCTCTGGCCTCTGGTCCTGACCTGGGTGCGTGATGGAAGAGGCTaGCCTGCCACGTTCGTGATG +
Preference number: 4 (lower is better)
Translates to: GGNWCTASALWPLVLTWVRDGRG*PATFVM
Trigger: CATCACGAACGTGGCAGGCCAGCCTCTTCCATCACG...CACCCAGGTCAGGACCAGAGGCCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCATGCCCCTGGGGTCTATaGCGTGTGGCGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPCPWGL*RVAKVT
Trigger: AGTCACCTTCGCCACACGCCATAGACCCCAGGGGCA...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATAAGTTAGGGGTGGGCTaGCCCGGCCTTTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHKLGVG*PGLCCP
Trigger: GGGGCAGCAAAGGCCGGGCCAGCCCACCCCTAACTT...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCCCACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCACACATGGGCTTCATGTaGCCTGCCTGGCCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AHMGFMWPAWPSPLGQVSHMGFM*PAWPSP
Trigger: AGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTG...TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCCAGAAGCAGACGCAGTaGGGGGCTGAGAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSQKQTQ*GAEKPS
Trigger: GCTGGGTTTCTCAGCCCCCCACTGCGTCTGCTTCTG...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCCAGAAGCAGACGCAGTaGGGGGCTGAGAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPQKQTQ*GAEKPS
Trigger: GCTGGGTTTCTCAGCCCCCCACTGCGTCTGCTTCTG...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTTCACCAGGTGACCTCTaGCCCTGGCCATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPSPGDL*PWPSCP
Trigger: AGGACAGGATGGCCAGGGCCAGAGGTCACCTGGTGA...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp GGGTCTCTGGCTGGATCTCAGGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSLAGSQVTELG*HHKRGLCLAGP
Trigger: TGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCACCTGAGATCCAGCCAGAGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: SVARSTSRHGPTPGARPGPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...ACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR TCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGGATGTAGTCAATCCCCCTTGGGTGCAGGGCTCCTaGCGAGTGGCTTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LALTVQGRHVPEDVVNPPWVQGS*RVAWLS
Trigger: TGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCA...AGGGGGATTGACTACATCCTCCGGCACATGCCTACCCTGCACCGTGAGCGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: GWRTAPSHGARGPPRARPLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...TGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATCTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCATTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGACCACACACAGACAGTaGAGGGGGCAGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPTTHRQ*RGQWCS
Trigger: TGAACACCACTGCCCCCTTCACTGTCTGTGTGTGGT...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCATGCTTGTCTCCAGTaGGCTGGAGGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYHACLQ*AGGWCG
Trigger: GCCACACCACCCTCCAGCTCACTGGAGACAAGCATG...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGCATGCTTGTCTCCAGTaGGCTGGAGGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLHACLQ*AGGWCG
Trigger: GCCACACCACCCTCCAGCTCACTGGAGACAAGCATG...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGCAAGAAAGAGCAAGTaGGCCGCAGGGAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDARKSK*AAGRCR
Trigger: GCGGCACCTCCCTGCGGCTCACTTGCTCTTTCTTGC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCACCACATGCTCACATCTaGGCCAGCACTAGGCGCACC +
Preference number: 4 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSPHAHI*ASTRRT
Trigger: GGTGCGCCTAGTGCTGGCTCAGATGTGAGCATGTGG...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCCCACATGCTCACATCTaGGCCAGCACTAGGCGCACC +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSPHAHI*ASTRRT
Trigger: GGTGCGCCTAGTGCTGGCTCAGATGTGAGCATGTGG...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTAGGCGTGTGGCGAAGGTaGCTGGCAGGGGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLGVWRR*LAGEAW
Trigger: CCAGGCTTCCCCTGCCAGTCACCTTCGCCACACGCC...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSAPAD*MQASQD
Trigger: GTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSATLHT*WKSSRP
Trigger: TGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: GWRTAPSHGARGPPRARPQRPKN*ASLMLA
Trigger: GGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTG...TGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCACAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPQRPKN*ASLMLA
Trigger: GGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTG...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 4 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCCCACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCATGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AHMGFMWPAWPSPLGQVSCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAACCAGCTTCTGTGCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGNQLLC*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACAACCAGCTTCTGTGCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYNQLLC*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTT...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPVNQLL*CGQPIQ
Trigger: CTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCCTGGACCGCCAGGTaGACCCCGTGTAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGAWTAR*TPCSKP
Trigger: TGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACTGCCCGGGAAGCTCCTaGTGGCCAGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHCPGSS*WPGPAP
Trigger: TGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGGGCA...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCTGCCCGGGAAGCTCCTaGTGGCCAGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPCPGSS*WPGPAP
Trigger: TGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGGGCA...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCTGACGTGTAGGAACTaGCGTGGCTGTCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGLTCRN*RGCRRS
Trigger: ACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTCCTCACTGACCCCGGCTGTCATTTCCTGGATCTGGTGCACGGCCTCGGCGCTCTGACGTGTAGGAACTaGCGTGGCTGTCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LLTDPGCHFLDLVHGLGALTCRN*RGCRRS
Trigger: ACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAG...AGCGCCGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGGGGTCAGTGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp TCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SKGTSTDISLDSLSQELAGCHHV*WGGCGW
Trigger: CCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC...GGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGATTTCCTGGATCTGGTaGACGGCCTCGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGISWIW*TASALW
Trigger: CCAGAGCGCCGAGGCCGTGCACCAGATCCAGGAAAT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGCCAGCTGGTGCAGCTaGATGTCGTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDASWCS*MSSRPW
Trigger: CCATGGCCTGGACGACATGCAGCTGCACCAGCTGGC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTGCAGGGCCAGCTGGTaGAGCTGCATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQECRASW*SCMSSR
Trigger: CCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPGRDS*WTSCWG
Trigger: TCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRPGRDS*WTSCWG
Trigger: TCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGG...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGTGCGGACGGTACTaGTGGGTGGGTGGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVRCGRY*WVGGAY
Trigger: GTAGGCACCACCCACCCAGCAGTACCGTCCGCACCG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: AALGGRPRRGLWVSHFPACWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCTGCTGGCTGCGGAAGTaGAGGCAGCATCTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWACWLRK*RQHLAG
Trigger: GCCCGCCAGATGCTGCCTGCACTTCCGCAGCCAGCA...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTCTTCTTTCCCAGAAATaGCAGCTTCCCAACGTGGGG +
Preference number: 4 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPLLSQK*QLPNVG
Trigger: CCCCACGTTGGGAAGCTGGCATTTCTGGGAAAGAAG...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGTGGCCCGGCCTTTGCTaGCCCTGGGGTCTATGGCGT +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGWPGLC*PWGLWR
Trigger: ACGCCATAGACCCCAGGGGCAGCAAAGGCCGGGCCA...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATTGGCTGCCTCGCCTCTaGCAGGACACAAGGCGCCGG +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNWLPRL*QDTRRR
Trigger: CCGGCGCCTTGTGTCCTGGCAGAGGCGAGGCAGCCA...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCAGTACACAGCGGCTTCTaGTGTTTGCAGGCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSVHSGF*CLQATP
Trigger: GGGGGTGGCCTGCAAACAGCAGAAGCCGCTGTGTAC...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACAGGCAGTTGCTGGCTaGCCCGGGCCTCCCAGATGG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGQAVAG*PGPPRW
Trigger: CCATCTGGGAGGCCCGGGGCAGCCAGCAACTGCCTG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGAGACACACAGGCAGTTaGTGGCTGCCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVRHTGS*WLPRAS
Trigger: GGAGGCCCGGGGCAGCCAGCAACTGCCTGTGTGTCT...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GACGTGGTCTACAGCGTTCAAGAACATCTGCAAAGGCGGGCTTCGGGCGGGCACAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: DVVYSVQEHLQRRASGGHKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...GTGCCCGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGCTGTAGACCACGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCATTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPLGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWALGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGGTGATGATCCACTGTGGGAAGTAGGAGTGTGGCTCGAAGTACCTCCCGGCGGTGCAGCAGGTGCCTaGACCGCCAGGTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: LGDDPLWEVGVWLEVPPGGAAGA*TARCTP
Trigger: CGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCACC...GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATCACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHSEEGHEGGSGFLISLLGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...AAGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGQWGQC*LLTPLP
Trigger: GGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GATGATCCACTGTGGGAAGTAGGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: DDPLWEVGVWLEVPPGMGQWGQC*LLTPLP
Trigger: GGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTG...GCCCATGCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CTCCAGCTTCTTTCCCTGGTAGATGTGCACTCCCCTGAGGGCCAGTCCCAGGATCAGTGGGGGCAGTGCTaGCTGCTGACCCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LQLLSLVDVHSPEGQSQDQWGQC*LLTPLP
Trigger: GGGCAGTGGGGTCAGCAGCCAGCACTGCCCCCACTG...ATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGGAAAGAAGCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp GCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AALGGRPRRGLWVSHFPAWRERQ*GQCWLL
Trigger: CAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCA...AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGACGGCTCCTTCTCATaGAGCCCGTGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSDGSFS*SPWTSK
Trigger: CTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTC...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGACGGCTCCTTCTCATaGAGCCCGTGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGDGSFS*SPWTSK
Trigger: CTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGACGGCTCCTTCTCATaGAGCCCGTGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRDGSFS*SPWTSK
Trigger: CTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGGACGGCTCCTTCTCATaGAGCCCGTGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRDGSFS*SPWTSK
Trigger: CTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTC...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCTGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPCHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACTGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHCHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTGCAGCTGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LGGRPRRGLWVSHFPACSCHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...GCTGCAAGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGAGGGCTCCTGACGAGTaGCTTGGCTGTCACCACGTG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRAPDE*LGCHHV
Trigger: CACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCAAGGGCTCCTGACGAGTaGCTTGGCTGTCACCACGTG +
Preference number: 4 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSRAPDE*LGCHHV
Trigger: CACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTCATTTCCTGGATCTaGTGCACGGCCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVISWI*CTASAL
Trigger: GAGCGCCGAGGCCGTGCACCAGATCCAGGAAATGAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGTCATTTCCTGGATCTaGTGCACGGCCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYVISWI*CTASAL
Trigger: GAGCGCCGAGGCCGTGCACCAGATCCAGGAAATGAC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCGGCTGTCATTTCCTaGATCTGGTGCACGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPAVIS*IWCTAS
Trigger: CGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCGCGCGGTGGAAGGTATaGCTGAGTGAGGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSARWKV*LSEVGA
Trigger: AGCGCCCACCTCACTCAGCCATACCTTCCACCGCGC...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCAGTCCAGGGCGCGGTaGAAGGTATGGCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGQSRAR*KVWLSE
Trigger: CTCACTCAGCCATACCTTCCACCGCGCCCTGGACTG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTGGGGAGAGTGGCCCTaGTCTCGCAGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVWGEWP*SRRGLP
Trigger: TGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGAGAGTGGCCCTaGTCTCGCAGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGWGEWP*SRRGLP
Trigger: TGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTTCAAGTTCTTGCTGGGGAGAGTaGCCCTGGTCTCGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SRLPPGERTVTSARAPSSSCWGE*PWSRRG
Trigger: GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGA...ACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYCWTSC*GEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCA...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCWTSC*GEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGRDSC*TSCWGE
Trigger: CTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSGRDSC*TSCWGE
Trigger: CTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCCCACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AHMGFMWPAWPSPLGQVSELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKNTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 4 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQERGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSSAPGQ*GLWKPW
Trigger: CCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGA...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQESAPGQ*GLWKPW
Trigger: CCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGA...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPRAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSEGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCAGCTGGAGGGTGGTGTaGCGTGGTCTTCACCACACA +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSSWRVV*RGLHHT
Trigger: TGTGTGGTGAAGACCACGCCACACCACCCTCCAGCT...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTAGGAGAGGGTCCCCCTaGATGGACCCGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRRRGSP*MDPSKR
Trigger: CCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCT...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCAGGCAGGCTGGTCCTaGTTCAAGCAGGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLQAGWS*FKQEAS
Trigger: AGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCTG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGACCCTGAGTGGGACGTaGTCTACAGCGTTCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLTLSGT*STAFKN
Trigger: GTTCTTGAACGCTGTAGACCACGTCCCACTCAGGGT...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTGCCCTCGGCAGCACTaGGGCTTGTGGCCATCTACA +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRCPRQH*GLWPST
Trigger: TGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGGCCTTTGCTGCCCCTaGGGTCTATGGCGTGTGGCG +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVGLCCP*GLWRVA
Trigger: CGCCACACGCCATAGACCCCAGGGGCAGCAAAGGCC...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGCCTTGGCCTGCTCCTTaGGGGTCCACAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWPWPAP*GSTGTG
Trigger: CCCAGTCCCTGTGGACCCCCAAGGAGCAGGCCAAGG...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTCACCAGGTGACCTCTaGCCCTGGCCATCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSPGDL*PWPSCP
Trigger: AGGACAGGATGGCCAGGGCCAGAGGTCACCTGGTGA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTAGAACTGCGCGTCTCTaGTGCTCGCCACGTTGCACA +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRRTARL*CSPRCT
Trigger: TGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCT...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTCCTCACTGACCCCGGCTGTCATTTCCTGGATCTGGTGCACGGCCTCGGCGCTAGAACTGCGCGTCTCTaGTGCTCGCCACGTTGCACA +
Preference number: 4 (lower is better)
Translates to: LLTDPGCHFLDLVHGLGARTARL*CSPRCT
Trigger: TGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCT...AGCGCCGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGGGGTCAGTGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR TCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVGLDA*RVGTAV
Trigger: CACGGCAGTTCCTACACGTCAGGCATCAAGGCCAAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCCAGGAGTTGGCCTTaGTGCCTGACGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGARSWP*CLTCRN
Trigger: GTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGTGGGTGCAGGGCTCCTaGCGAGTGGCTTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGWVQGS*RVAWLS
Trigger: TGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCA...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCATGGGTGCAGGGCTCCTaGCGAGTGGCTTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPWVQGS*RVAWLS
Trigger: TGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCA...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCTGGGTGCAGGGCTCCTaGCGAGTGGCTTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAWVQGS*RVAWLS
Trigger: TGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCA...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGGTGGAAGGTATGGCTaGGTGAGGTGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVGGRYG*VRWALG
Trigger: ACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGGGGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: WGWRTAPSHGARGPPRARCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...ACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGACYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACACTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTACCACACACAGACAGTaGAGGGGGCAGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGATTHRQ*RGQWCS
Trigger: TGAACACCACTGCCCCCTTCACTGTCTGTGTGTGGT...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGAACAGGTCCAGGGGGCGGGTGGATCACCTaGGGTCGGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VVPTPQTPVVEPLRTGPGGGWIT*GREFET
Trigger: GGTCTCAAACTCCCGACCTCAGGTGATCCACCCGCC...CCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCATGCCAGCTTGACCGCTaGCCTGGCCCGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPCQLDR*PGPGHR
Trigger: CCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCA...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCGGCTGGGCTGATGGCTaGGGGCCCAGAGGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGGWADG*GPRGVH
Trigger: ATGGACTCCTCTGGGCCCTCAGCCATCAGCCCAGCC...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: EQVQGETVAGPLAGESGPLLLTA*RPLRTG
Trigger: CCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAG...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRATLHT*WKSSRP
Trigger: TGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCATCGCCCAGGTCAGCCTaGAGCGCGCAGGCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPSPRSA*SAQAAS
Trigger: GCTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGA...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTTGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERAWADSR*SPRSAC
Trigger: GCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCA...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTAAACCAGCTTCTGTGCTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTTCTTCCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: VNQLLCCGQPIQLDLQLLPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...AAGAAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACAACCAGCTTCTGTGCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDNQLLC*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTT...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVNQLL*CGQPIQ
Trigger: CTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGCCTGGACCGCCAGGTaGACCCCGTGTAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: EQVQGETVAGPLAGESGPAWTAR*TPCSKP
Trigger: TGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGC...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCCTGGACCGCCAGGTaGACCCCGTGTAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHAWTAR*TPCSKP
Trigger: TGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGC...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGCGCTGCCGCAGCTGTTaGAGAGTGGGCCGCACGCGG +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVRCRSC*RVGRTR
Trigger: CCGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCG...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GAACGGCCTCCTATTTTATACGGGAGGAAACTGGTGCACGGCCTCGGCGCTCTGTGCCCGGGAAGCTCCTaGTGGCCAGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: ERPPILYGRKLVHGLGALCPGSS*WPGPAP
Trigger: TGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGGGCA...CAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATCTGACGTGTAGGAACTaGCGTGGCTGTCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHLTCRN*RGCRRS
Trigger: ACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAG...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTGTGTGCTGGGGTGGCTaGGGCTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSTDISLDSLSQELALMPVCWGG*GWSWGW
Trigger: CCAGCCCCAGGACCAGCCGCAGCCACCCCAGCACAC...AGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCT +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGRPWLC*SSLTPA
Trigger: AGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCT...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCT +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPRPWLC*SSLTPA
Trigger: AGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCT...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTTCAAGTTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCG +
Preference number: 4 (lower is better)
Translates to: SRLPPGERTVTSARAPSSSRPWL*CSSLTP
Trigger: CGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGA...ACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTGCAGCGCCAGCTGGTGCAGCTaGATGTCGTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LGGRPRRGLWVSHFPACSASWCS*MSSRPW
Trigger: CCATGGCCTGGACGACATGCAGCTGCACCAGCTGGC...GCTGCAAGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGCCAGCTGGTGCAGCTaGATGTCGTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAASWCS*MSSRPW
Trigger: CCATGGCCTGGACGACATGCAGCTGCACCAGCTGGC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDPGRDS*WTSCWG
Trigger: TCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGG...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGLLGGW*LHHKLL
Trigger: CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGCTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLLLGGW*LHHKLL
Trigger: CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCCCACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCACTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: AHMGFMWPAWPSPLGQVSLLGGW*LHHKLL
Trigger: CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG...TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACGGTGCGGACGGTACTaGTGGGTGGGTGGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGRCGRY*WVGGAY
Trigger: GTAGGCACCACCCACCCAGCAGTACCGTCCGCACCG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTCGGTGCGGACGGTACTaGTGGGTGGGTGGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: MEPVDLQGHVHRHLSGFPRCGRY*WVGGAY
Trigger: GTAGGCACCACCCACCCAGCAGTACCGTCCGCACCG...AGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGADSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACTCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYSEQVP*TASPPL
Trigger: GAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGA...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATCCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPQCTQP*TRPWGS
Trigger: TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCCAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPQCTQP*TRPWGS
Trigger: TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATACGGGAGGAAACTGGTaGACGGCCTCGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNTGGNW*TASALW
Trigger: CCAGAGCGCCGAGGCCGTGCACCAGTTTCCTCCCGT...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp TTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGGATGGGTTTCTCATTTCCCTaGTTGCAGCCTCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LGLRPWRSRCRVGMCRRMGFSFP*LQPQGS
Trigger: TGAGCCCTGAGGCTGCAAGCAGGGAAATGAGAAACC...CATCCTCCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGCCCAGGATGGCCTTCTaGTTCCAGCTCCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQPRMAF*FQLRSC
Trigger: GCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGG...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAAGACACACAGGCAGTTaGTGGCTGCCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPRHTGS*WLPRAS
Trigger: GGAGGCCCGGGGCAGCCAGCAACTGCCTGTGTGTCT...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGGTCATGGGCCCGGCTaGAGGACCGGCATTGCCTAC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGGHGPG*RTGIAY
Trigger: GTAGGCAATGCCGGTCCTGCAGCCGGGCCCATGACC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGTTGCTCCCGGCTaGGCAGCAGCACGAGGACAT +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVAVAPG*AAARGH
Trigger: ATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGC...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTGCAGTTGCTCCCGGCTaGGCAGCAGCACGAGGACAT +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPAVAPG*AAARGH
Trigger: ATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGC...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: TCRNCRGCRRSGVRGSGGTLHTC*KSSRPV
Trigger: TACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGT...GCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAGTTCCTACACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTGCCCTGTGGTCGCTTATGACAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: ALLQVAVVQVPCPVVAYDKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...GTCATAAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTTTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLLGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGGTGCAGCAGGTGCCTaGACCGCCAGGTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEGAAGA*TARCTP
Trigger: CGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCACC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACGGAGGTGGAGCTGGTaGCTGGCGCGCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPRRWSW*LARSRC
Trigger: GCACCTGCTGCGCGCCAGCCACCAGCTCCACCTCCG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTCCAGCTTCTTTCCCTGGTAGATGTGCACTCCCCTGAGGGCCAGTCCCAGGATGCAGCTGTTGCAGAGTaGGCCGCACGCGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LQLLSLVDVHSPEGQSQDAAVAE*AARGGG
Trigger: TCCACCTCCGCGTGCGGCCCACTCTGCAACAGCTGC...ATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGGAAAGAAGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCCGGGAAGCTCCTGCTaGCCAGGTCCAGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNPGSSC*PGPAPA
Trigger: AGCTGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATGGCGTGAGAGGCAGTaGGGGCAGTGCTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLWRERQ*GQCWLL
Trigger: CAGCAGCCAGCACTGCCCCCACTGCCTCTCACGCCA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATGTCACCACGTGTGCTaGGGTGGCTGCGGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLCHHVC*GGCGWS
Trigger: GGACCAGCCGCAGCCACCCCAGCACACGTGGTGACA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTCCGGCTGTCATTTCCTaGATCTGGTGCACGGCCTCG +
Preference number: 4 (lower is better)
Translates to: EQVQGETVAGPLAGESGPPAVIS*IWCTAS
Trigger: CGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGG...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGATGTCGTCCAGGCCATaGCTGTGCTGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGMSSRP*LCCSSL
Trigger: CAGTGAGGAGCAGCACAGCCATGGCCTGGACGACAT...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAGGGTGCAGGGCCAGCTaGTGCAGCTGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPGCRAS*CSCMSS
Trigger: GGACGACATGCAGCTGCACCAGCTGGCCCTGCACCC...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGGTGCAGGGCCAGCTaGTGCAGCTGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSGCRAS*CSCMSS
Trigger: GGACGACATGCAGCTGCACCAGCTGGCCCTGCACCC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTTCAAGTGCGCGGTGGAAGGTATaGCTGAGTGAGGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SRLPPGERTVTSARAPSSARWKV*LSEVGA
Trigger: AGCGCCCACCTCACTCAGCCATACCTTCCACCGCGC...ACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGCGCGGTGGAAGGTATaGCTGAGTGAGGTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPARWKV*LSEVGA
Trigger: AGCGCCCACCTCACTCAGCCATACCTTCCACCGCGC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTTGGGGAGAGTGGCCCTaGTCTCGCAGGGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVWGEWP*SRRGLP
Trigger: TGGCAGGCCCCTGCGAGACCAGGGCCACTCTCCCCA...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCTGCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: LVQPEEVHGHVLQPAGLLHKLLW*SLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTG...CAGGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGDGTAG*VVPTPQ
Trigger: TTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACTGCGGACGGTACTGCTaGGTGGGTGGTGCCTACACC +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHCGRYC*VGGAYT
Trigger: GGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCA...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCACAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCTCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGASPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCRGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVRGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTTGTGGCCAGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PHRNCGQSCPRQHWGLWPAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...TGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCGGCCTCTCAGTGCTCTaGGATGGGCCTGAGACTAGC +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSGLSVL*DGPETS
Trigger: GCTAGTCTCAGGCCCATCCCAGAGCACTGAGAGGCC...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSRAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYEGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTTGTGGCCAAGCTGGAGGGTGGTGTaGCGTGGTCTTCACCACACA +
Preference number: 4 (lower is better)
Translates to: PHRNCGQSCPRQHWGLWPSWRVV*RGLHHT
Trigger: TGTGTGGTGAAGACCACGCCACACCACCCTCCAGCT...TGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGCCCTGCACCAGGCCATaGGGCTCAAGCTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEPCTRP*GSSSCL
Trigger: CAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGG...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGAGGGTCCCCCTGGATaGACCCGTCAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNEGPPG*TRQRGG
Trigger: GCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTC...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGCCAGCTTCCCAACGTaGGGCCAGGGGAGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSASFPT*GQGRSY
Trigger: GTACGACCTCCCCTGGCCCCACGTTGGGAAGCTGGC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCGTGTACCTTCCCTCATaGTCCATGGGACTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQAVYLPS*SMGLGS
Trigger: AGAGCCCAGTCCCATGGACCATGAGGGAAGGTACAC...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCATGTGGCGAAGGTGACTaGCAGGGGAAGCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSCGEGD*QGKPGH
Trigger: ATGTCCAGGCTTCCCCTGCCAGTCACCTTCGCCACA...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGCACATGGGCTTCATGTaGCCTGCCTGGCCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQHMGFM*PAWPSP
Trigger: AGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTG...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGGGGTCCACAGGGACTaGGACAGGTGGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPGVHRD*DRWFSF
Trigger: AAAAGAAAACCACCTGTCCCAGTCCCTGTGGACCCC...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTCCTTGGCCTGCTCCTTaGGGGTCCACAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSPWPAP*GSTGTG
Trigger: CCCAGTCCCTGTGGACCCCCAAGGAGCAGGCCAAGG...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGATGCTGGAGGTCCTTaGCCTGCTCCTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCDAGGP*PAPWGS
Trigger: GGACCCCCAAGGAGCAGGCCAAGGACCTCCAGCATC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTaGGGCAAGTCTCAGGGCAGCGGGCCTCTAATTGTC +
Preference number: 4 (lower is better)
Translates to: TWASCGLPGRPL*GKSQGSGPLIV
Trigger: GACAATTAGAGGCCCGCTGCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp CCAGAGTCCATGGGCCACGACGGGCTGATGCTCGGCTaGGGAACCACCTCTCCTGTGAGATCCCAGACACAC +
Preference number: 4 (lower is better)
Translates to: PESMGHDGLMLG*GTTSPVRSQTH
Trigger: GTGTGTCTGGGATCTCACAGGAGAGGTGGTTCCCAAGCCGAGCATCAGCCCGTCGTGGCCCATGGACTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGTATACTCATTGTTTCTaGCCACACAGAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: MGRLPVLAQVSLQRAGSQYTHCF*PHRGQR
Trigger: TCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTATA...CTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGCAGGCCTCCTGGATaGAGCACAGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSGRPPG*STAWPP
Trigger: AGGAGGCCATGCTGTGCTTCATCCAGGAGGCCTGCC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGGCAGGCCTCCTGGATaGAGCACAGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNGRPPG*STAWPP
Trigger: AGGAGGCCATGCTGTGCTTCATCCAGGAGGCCTGCC...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCGGCAGGCCTCCTGGATaGAGCACAGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGGRPPG*STAWPP
Trigger: AGGAGGCCATGCTGTGCTTCATCCAGGAGGCCTGCC...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTATCCTTGTGCAGCCTaGAGAAGTGCACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGYPCAA*RSARAR
Trigger: ACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTTGTGGCCATATCCTTGTGCAGCCTaGAGAAGTGCACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: PHRNCGQSCPRQHWGLWPYPCAA*RSARAR
Trigger: ACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATA...TGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTTCAAGTAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SRLPPGERTVTSARAPSSRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...ACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLAPAHR*YRTPGS
Trigger: ACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGC...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGAPAHR*YRTPGS
Trigger: ACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGGCCAGGAGTTGGCCTTaGTGCCTGACGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEARSWP*CLTCRN
Trigger: GTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGC...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCGCCAGGAGTTGGCCTTaGTGCCTGACGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSARSWP*CLTCRN
Trigger: GTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGC...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGCCAGGAGTTGGCCTTaGTGCCTGACGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDARSWP*CLTCRN
Trigger: GTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTGGTGGAAGGTATGGCTaGGTGAGGTGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETGGRYG*VRWALG
Trigger: ACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACCTGAGGCCTCATGGCTaGGATGGGAGCAGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADLRPHG*DGSRVG
Trigger: GCCGACTCTGCTCCCATCTCAGCCATGAGGCCTCAG...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACTTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCTTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCATGCTTGTCTCCAGTaGGCTGGAGGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPHACLQ*AGGWCG
Trigger: GCCACACCACCCTCCAGCTCACTGGAGACAAGCATG...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCACAGTGTTCCTACAGCTaGGCCTCTCACGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPQCSYS*ASHGSL
Trigger: GAGGCTGCCGTGAGAGGCTCAGCTGTAGGAACACTG...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS-3UTR TCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGCCGATGCCCCTGAGTaGGTTACAGCCGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAADAPE*VTAGIS
Trigger: TGAGATGCCGGCTGTAACTCACTCAGGGGCATCGGC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGCCGATGCCCCTGAGTaGGTTACAGCCGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVADAPE*VTAGIS
Trigger: TGAGATGCCGGCTGTAACTCACTCAGGGGCATCGGC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTTGCCAGCTTGACCGCTaGCCTGGCCCGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLCQLDR*PGPGHR
Trigger: CCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCA...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCGTCCGCCTCACCAGGTaGCCTCTGGCCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCVRLTR*PLALAI
Trigger: GATGGCCAGGGCCAGAGGTCACCTGGTGAGGCGGAC...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCSAPAD*MQASQD
Trigger: GTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGA...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACATCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTSAPAD*MQASQD
Trigger: GTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGA...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCATGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTTGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GACGTGGTCTACAGCGTTCAAGAACATCTGCAAAGGCGGGCTTCGGGCGGGCACTGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: DVVYSVQEHLQRRASGGHCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...GTGCCCGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGCTGTAGACCACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGTCCTTCTTATCCTTGTaGAGCCTGAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKSFLSL*SLKKCT
Trigger: CGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGA...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAAACCAGCTTCTGTGCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPNQLLC*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTT...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGCCTGGACCGCCAGGTaGACCCCGTGTAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGAWTAR*TPCSKP
Trigger: TGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGC...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGCCTGGACCGCCAGGTaGACCCCGTGTAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVAWTAR*TPCSKP
Trigger: TGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCAGCAGGTGCAGCAGGTaGCTGGACCGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VVAYDPSVFHVVLHSEEGSRCSR*LDRQVH
Trigger: GTGCACCTGGCGGTCCAGGCACCTGCTGCACCTGCT...GCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCACTGACGTGTAGGAACTaGCGTGGCTGTCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPLTCRN*RGCRRS
Trigger: ACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAG...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCGCCCTGAAGCTCTGTTCTGGAAGTAAGTCTCAGGATCCTCCTGAGGGACGTGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VALKLCSGSKSQDPPEGRGCHHV*WGGCGW
Trigger: CCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC...ACGTCCCTCAGGAGGATCCTGAGACTTACTTCCAGAACAGAGCTTCAGGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTAAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLRPWLC*SSLTPA
Trigger: AGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCT...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCG +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPSRPWL*CSSLTP
Trigger: CGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGSRPWL*CSSLTP
Trigger: CGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCG +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVSRPWL*CSSLTP
Trigger: CGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTTGCAGGGCCAGCTGGTaGAGCTGCATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETCRASW*SCMSSR
Trigger: CCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGCCAGGGCGAGACAGTTaGTGGACCTCTTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVPGRDS*WTSCWG
Trigger: TCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGG...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGACGGTGCGGACGGTACTaGTGGGTGGGTGGTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGRCGRY*WVGGAY
Trigger: GTAGGCACCACCCACCCAGCAGTACCGTCCGCACCG...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGCTCCGCCAGCTGGGCTaGACCAGCCCAACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLLRQLG*TSPTPA
Trigger: GGCTGGGGTTGGGCTGGTGCAGCCCAGCTGGCGGAG...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTGTGCAGGAGTGTTGTaGAGGGGGAGGAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPCAGVL*RGRSPG
Trigger: CCCAGGGCTCCTCCCCCTGCACAACACTCCTGCACA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCTTCTTTCCCAGAAATaGCAGCTTCCCAACGTGGGG +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLLLSQK*QLPNVG
Trigger: CCCCACGTTGGGAAGCTGGCATTTCTGGGAAAGAAG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAGCTGGCAGCAGGGACTaGAGAGGGGCGAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGAGSRD*RGARCP
Trigger: AGGACACCTCGCCCCTCTGCAGTCCCTGCTGCCAGC...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR GCA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCAAAGGGAGAAGCTGGATaGAAAAGGCCGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSKGEAG*KRPGSI
Trigger: AATGGAGCCCGGCCTTTTGCATCCAGCTTCTCCCTT...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTCGGCAGCACTGGGGCTTGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCGTGGGAAGTGCCCACATaGTCACATCTGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PRQHWGLWPSTERSLLWPWEVPT*SHLSQH
Trigger: GTGCTGGCTCAGATGTGAGCATGTGGGCACTTCCCA...CGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCATGGTGGACACCACCTaGTGTGTCTCCCCAACACTG +
Preference number: 4 (lower is better)
Translates to: TWASCGLPGRPLLGKSQGMVDTT*CVSPTL
Trigger: CAGTGTTGGGGAGACACAGCAGGTGGTGTCCACCAT...GCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACACCGGCCTGCCTCATaGCACCTGAAGGCCACAAGC +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLHRPAS*HLKATS
Trigger: GCTTGTGGCCTTCAGGTGGCATGAGGCAGGCCGGTG...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCTCCCCCACCGGCCTaGCTCATGCCACCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERAPPPPA*LMPPEG
Trigger: GCCTTCAGGTGGCATGAGGCAGGCCGGTGGGGGAGG...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTGGAGGTCCTTGGCCTaGTCCTTGGGGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSWRSLA*SLGVHR
Trigger: CCTGTGGACCCCCAAGGAGCAGGCCAAGGACCTCCA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCAGGCCGTCAATTACTaGAGATGGAGCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSQAVNY*RWSRLS
Trigger: GGAAAGCCTGCTCCATCTGCAGTAATTGACGGCCTG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGCCGGCCTCCTCCTCCTaGTTGGGGTTCAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVPASSS*LGFSPR
Trigger: TCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGG...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCACTGCAGGACCGGCATTaGCTACCACGTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPLQDRH*LPRPAS
Trigger: GGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAG...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCTGCAGGACCGGCATTaGCTACCACGTCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNLQDRH*LPRPAS
Trigger: GGAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCAGGCCTCTCAGGACTaGGTTCCATACATCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGQASQD*VPYIAP
Trigger: GGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTG...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TATGACCCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGAAGTACCTCCCGGCATaGGCCGACTCCCGGTGCTCG +
Preference number: 4 (lower is better)
Translates to: YDPSVFHVVLHSEEGHEGKYLPA*ADSRCS
Trigger: CGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT...CCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCTGGCTGTCGGCGGAGTaGCGTGAGAGGCAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCWLSAE*RERQWG
Trigger: CCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCA...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACAGGGCTCCTGACGAGTaGCTTGGCTGTCACCACGTG +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHRAPDE*LGCHHV
Trigger: CACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGAGGGCTCCTGACGAGTaGCTTGGCTGTCACCACGTG +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQRAPDE*LGCHHV
Trigger: CACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTAGGGCTCCTGACGAGTaGCTTGGCTGTCACCACGTG +
Preference number: 4 (lower is better)
Translates to: AALGGRPRRGLWVSHFPARAPDE*LGCHHV
Trigger: CACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT...AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAAGGGCTCCTGACGAGTaGCTTGGCTGTCACCACGTG +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTRAPDE*LGCHHV
Trigger: CACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGGTCATTTCCTGGATCTaGTGCACGGCCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQVISWI*CTASAL
Trigger: GAGCGCCGAGGCCGTGCACCAGATCCAGGAAATGAC...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGTCATTTCCTGGATCTaGTGCACGGCCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCVISWI*CTASAL
Trigger: GAGCGCCGAGGCCGTGCACCAGATCCAGGAAATGAC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGCCGGCTGTCATTTCCTaGATCTGGTGCACGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWPAVIS*IWCTAS
Trigger: CGAGGCCGTGCACCAGATCCAGGAAATGACAGCCGG...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACACAGTCCAGGGCGCGGTaGAAGGTATGGCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTQSRAR*KVWLSE
Trigger: CTCACTCAGCCATACCTTCCACCGCGCCCTGGACTG...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCAGTCCAGGGCGCGGTaGAAGGTATGGCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAQSRAR*KVWLSE
Trigger: CTCACTCAGCCATACCTTCCACCGCGCCCTGGACTG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWCWTSC*GEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCA...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPCWTSC*GEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCA...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGHKLLW*SLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGHHKLL*WSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRHHKLL*WSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTG...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVLLGG*CLHHKL
Trigger: GAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAA +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSDGTAG*VVPTPQ
Trigger: TTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTC...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGAGTGCAGGCAGCATCTaGCGGGCAGGAAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVSAGSI*RAGRDE
Trigger: CTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACT...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: TRQRGGLNARSPAPGHGANTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCTCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EQVQGETVAGPLAGESGPAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCTTGGAAGCCCTGGCTTaGAAGGGAAAGCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSLEALA*KGKHSH
Trigger: ATGGCTGTGCTTTCCCTTCCAAGCCAGGGCTTCCAA...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTGAGACCCTACCCTGGTaGCCTTCCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPETLPW*PSRAHR
Trigger: TCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTC...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGAGACCCTACCCTGGTaGCCTTCCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVETLPW*PSRAHR
Trigger: TCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGGCCTCTCAGTGCTCTaGGATGGGCCTGAGACTAGC +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPGLSVL*DGPETS
Trigger: GCTAGTCTCAGGCCCATCCCAGAGCACTGAGAGGCC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGAGGAGAGGGTCCCCCTaGATGGACCCGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQRRGSP*MDPSKR
Trigger: CCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCT...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCAGGCAGGCTGGTCCTaGTTCAAGCAGGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDQAGWS*FKQEAS
Trigger: AGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCTG...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCTCTTGTCTTCTCGACTaGCCTGTTCGTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: KYLPAWADSRCSPRSACSSCLLD*PVRDGR
Trigger: TCTTCCATCACGAACAGGCCAGTCGAGAAGACAAGA...GCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCCGGAGAACCCTGAGTaGGACGTGGTCTACAGCGTT +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDPENPE*DVVYSV
Trigger: AACGCTGTAGACCACGTCCCACTCAGGGTTCTCCGG...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGAACTCTCTCTTCTTCTaGACGGCTGGTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKNSLFF*TAGFHP
Trigger: AGGATGGAAACCAGCCGTCCAGAAGAAGAGAGAGTT...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTTGCCCTCGGCAGCACTaGGGCTTGTGGCCATCTACA +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCCPRQH*GLWPST
Trigger: TGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCA...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGTTCCCTCATGGTCCATaGGACTGGGCTCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLFPHGP*DWALAS
Trigger: GGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAA...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTCAGACCCTGCTTCATaGTGGACACCACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRSDPAS*WTPPAV
Trigger: CACAGCAGGTGGTGTCCACCATGAAGCAGGGTCTGA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAAATAGGAATCCCCAGTaGGGCCAGAGAAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPNRNPQ*GQRSFS
Trigger: CGAGAAGCTTCTCTGGCCCCACTGGGGATTCCTATT...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCTGCTGCTTTCTGTCTaGGAAGGAGCCCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVLLLSV*EGAPSQ
Trigger: CTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTAGATGCTGGAGGTCCTTaGCCTGCTCCTTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLDAGGP*PAPWGS
Trigger: GGACCCCCAAGGAGCAGGCCAAGGACCTCCAGCATC...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCAGGATGAGCTTTGTCTaGAATTCTCCATCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: PASLTADLARATGLTTPARMSFV*NSPSSV
Trigger: CACGGAAGATGGAGAATTCCAGACAAAGCTCATCCT...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCCCTCCTCCTCCTGCTTaGGGTTCAGCCCAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPPPPPA*GSAQEQ
Trigger: CTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGG...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACACACAGGCAGTTGCTaGCTGCCCCGGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPHTGSC*LPRASQ
Trigger: CTGGGAGGCCCGGGGCAGCCAGCAACTGCCTGTGTG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGCACACAGGCAGTTGCTaGCTGCCCCGGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVHTGSC*LPRASQ
Trigger: CTGGGAGGCCCGGGGCAGCCAGCAACTGCCTGTGTG...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTCTTTCCCCGTGGCTCTaGCACATTTCCCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLLSPWL*HISPAW
Trigger: CCAGGCGGGGGAAATGTGCCAGAGCCACGGGGAAAG...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCCTTTCCCCGTGGCTCTaGCACATTTCCCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGLSPWL*HISPAW
Trigger: CCAGGCGGGGGAAATGTGCCAGAGCCACGGGGAAAG...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp CCTGGGTCCTGCACAGTGATGACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PGSCTVMTVNSG*GALAACAHQDC
Trigger: ACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAGGACCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp AATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTaGTGGCCATCTACAGAACGCAGCCTTCTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: NCGQSCPRQHWG*WPSTERSLLWP
Trigger: CGGCCACAGAAGGCTGCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGAGAACTGCGCGTCTCTaGTGCTCGCCACGTTGCACA +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWRTARL*CSPRCT
Trigger: TGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCT...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCCCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERAPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTGGCAGGCCTCCTGGATaGAGCACAGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SHGARGPPRARPQTSLWIGRPPG*STAWPP
Trigger: AGGAGGCCATGCTGTGCTTCATCCAGGAGGCCTGCC...AATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDAPAHR*YRTPGS
Trigger: ACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAVGLDA*RVGTAV
Trigger: CACGGCAGTTCCTACACGTCAGGCATCAAGGCCAAC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHVGLDA*RVGTAV
Trigger: CACGGCAGTTCCTACACGTCAGGCATCAAGGCCAAC...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTTCAAGTGCCAGGAGTTGGCCTTaGTGCCTGACGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SRLPPGERTVTSARAPSSARSWP*CLTCRN
Trigger: GTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGC...ACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGCCAGGAGTTGGCCTTaGTGCCTGACGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPARSWP*CLTCRN
Trigger: GTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGTGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGTGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACTATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTCTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGCTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGTTGACAGCCAGACCTTaGACTGGCTCCCTGAGACCC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVLTARP*TGSLRP
Trigger: GGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAA...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTAGATCTCCTCATGGCTaGGCCCTGGAGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETRSPHG*ALESSS
Trigger: CGAGGAGGACTCCAGGGCTCAGCCATGAGGAGATCT...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGTGGCCGATGCCCCTaGGTGAGTTACAGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGCGRCP*VSYSRH
Trigger: ATGCCGGCTGTAACTCACTCAGGGGCATCGGCCACA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCCCGGGCCAGCTTCACTaGTGCTTCCACAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPPGQLH*CFHKLG
Trigger: CCCTAACTTGTGGAAGCATCAGTGAAGCTGGCCCGG...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGGAACCACCTCTCCTGTaGGATCCCAGACACACAGGC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVEPPLL*DPRHTG
Trigger: GCCTGTGTGTCTGGGATCTCACAGGAGAGGTGGTTC...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGGTCCGCCTCACCAGGTaGCCTCTGGCCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLVRLTR*PLALAI
Trigger: GATGGCCAGGGCCAGAGGTCACCTGGTGAGGCGGAC...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTATLHT*WKSSRP
Trigger: TGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGC...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVQRPKN*ASLMLA
Trigger: GGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTCAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVQRPKN*ASLMLA
Trigger: GGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTG...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACACCCTGGCGCTCACGGTaGAGGGTAGGCATGTGCCGG +
Preference number: 4 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITPWRSR*RVGMCR
Trigger: CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGG...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTTGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCTCCTTCTTATCCTTGTaGAGCCTGAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPSFLSL*SLKKCT
Trigger: CGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGA...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCVNQLL*CGQPIQ
Trigger: CTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGCCTGGACCGCCAGGTaGACCCCGTGTAGTAAACCA +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSAWTAR*TPCSKP
Trigger: TGGTTTACTACACGGGGTGCACCTGGCGGTCCAGGC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGTGCCCGGGAAGCTCCTaGTGGCCAGGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVECPGSS*WPGPAP
Trigger: TGGAGCTGGACCTGGCCAGCAGGAGCTTCCCGGGCA...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTCTGACGTGTAGGAACTaGCGTGGCTGTCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSLTCRN*RGCRRS
Trigger: ACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAG...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACAGGCTGTCACCACGTGTaGTGGGGTGGCTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITGCHHV*WGGCGW
Trigger: CCAGCCGCAGCCACCCCAGCACACGTGGTGACAGCC...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTATTTCCTGGATCTGGTaGACGGCCTCGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETISWIW*TASALW
Trigger: CCAGAGCGCCGAGGCCGTGCACCAGATCCAGGAAAT...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTGGTGATGATCCACTGTGGGAAGTAGGAGTGTGGCTCGAAGTACCTCCCGGCTGCAGGGCCAGCTGGTaGAGCTGCATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGDDPLWEVGVWLEVPPGCRASW*SCMSSR
Trigger: CCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA...GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATCACCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTCAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGGATGGGTGACAGGCTaGCTCAGGGGCCAACACCAT +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNGWVTG*LRGQHH
Trigger: ATGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCC...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCAGGAAGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: AGSRLPPGERTVTSARAPEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...AGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACTTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTTCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPSEQVP*TASPPL
Trigger: GAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGA...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCTCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPSEQVP*TASPPL
Trigger: GAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGA...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACCCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACCGGATCAGAGCAGGTaGCATGCACAGCTAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGPDQSR*HAQLVP
Trigger: GGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGCAGGTTTGCACGTGTaGAGGAGTGTTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVAGLHV*RSVVQG
Trigger: CCCCTGCACAACACTCCTGCACACGTGCAAACCTGC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTGCAGGTTTGCACGTGTaGAGGAGTGTTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPAGLHV*RSVVQG
Trigger: CCCCTGCACAACACTCCTGCACACGTGCAAACCTGC...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGCAGGTTTGCACGTGTaGAGGAGTGTTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWAGLHV*RSVVQG
Trigger: CCCCTGCACAACACTCCTGCACACGTGCAAACCTGC...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGCAGGTTTGCACGTGTaGAGGAGTGTTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPAGLHV*RSVVQG
Trigger: CCCCTGCACAACACTCCTGCACACGTGCAAACCTGC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSRGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCTTCTTTCCCAGAAATaGCAGCTTCCCAACGTGGGG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGLLSQK*QLPNVG
Trigger: CCCCACGTTGGGAAGCTGGCATTTCTGGGAAAGAAG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336070.11
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCATTTCCTGGATCTCTaGGAGAGAGGCTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLHFLDL*ERGLAS
Trigger: AGATGCCAAGCCTCTCTCGCAGAGATCCAGGAAATG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAATTGTGGGCAGTCTTaGCCTCGGCAGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADNCGQS*PRQHWG
Trigger: GCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATT...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACTCTTGGCTCAGACCCTaGTTCATGGTGGACACCACC +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDSWLRP*FMVDTT
Trigger: GGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGA...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCTCTTGGCTCAGACCCTaGTTCATGGTGGACACCACC +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSSWLRP*FMVDTT
Trigger: GGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGA...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGCCAGGGGCCATGGCTaGCTCGCCTCTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLARGHG*LASART
Trigger: TGTCCTGGCAGAGGCGAGGCAGCCATGGCCCCTGGC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGGGCTTCATGTGGCCTaGCTGGCCGTCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEGLHVA*LAVPSW
Trigger: CCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCAGCCCCGCTCTCTGCTaGTTTCTGTCTGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPSPALC*FLSGKE
Trigger: CTCCTTCCCAGACAGAAAGCAGCAGAGAGCGGGGCT...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGCCGTGCCCTGTGGTCGCCCTGAAGCTCTGTTCTGGAAGTAAGTCTCAGGATGCAGTTGCTCCCGGCTaGGCAGCAGCACGAGGACAT +
Preference number: 4 (lower is better)
Translates to: VPCPVVALKLCSGSKSQDAVAPG*AAARGH
Trigger: ATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGC...ATCCTGAGACTTACTTCCAGAACAGAGCTTCAGGGCGACCACAGGGCACGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCCCACGAAGGGGGCTCTaGGTTTCTCATTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSPRRGL*VSHFLH
Trigger: ATGAAGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAAGGTGCCGTGCCCTGTaGTCGCTTATGACCCTTCCG +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPRCRAL*SLMTLP
Trigger: CGGAAGGGTCATAAGCGACCACAGGGCACGGCACCT...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACATGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTCCCAGGATCACGGTaGGACGACCTTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVPGSR*DDLPSY
Trigger: ATAAGAAGGAAGGTCGTCCCACCGTGATCCTGGGAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACGTCCCAGGATCACGGTaGGACGACCTTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYVPGSR*DDLPSY
Trigger: ATAAGAAGGAAGGTCGTCCCACCGTGATCCTGGGAC...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGGTGGAGCTGGTGGCTaGCGCGCAGCAGGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLGGAGG*RAAGAA
Trigger: TGCTGCACCTGCTGCGCGCCAGCCACCAGCTCCACC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCGACGGCTCCTTCTCATaGAGCCCGTGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPDGSFS*SPWTSK
Trigger: CTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTC...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGGTGCCGTGCCCTGTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGGACGGCTCCTTCTCATaGAGCCCGTGGACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: QVPCPVVAYDPSVFHVVLDGSFS*SPWTSK
Trigger: CTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTC...CAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGGCACGGCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCATGTCGTCCAGGCCATaGCTGTGCTGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAMSSRP*LCCSSL
Trigger: CAGTGAGGAGCAGCACAGCCATGGCCTGGACGACAT...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGATGTCGTCCAGGCCATaGCTGTGCTGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVMSSRP*LCCSSL
Trigger: CAGTGAGGAGCAGCACAGCCATGGCCTGGACGACAT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAATGTCGTCCAGGCCATaGCTGTGCTGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPMSSRP*LCCSSL
Trigger: CAGTGAGGAGCAGCACAGCCATGGCCTGGACGACAT...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCAGTCCAGGGCGCGGTaGAAGGTATGGCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNQSRAR*KVWLSE
Trigger: CTCACTCAGCCATACCTTCCACCGCGCCCTGGACTG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETCWTSC*GEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCA...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGTGCCCTGTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGCACTCGTGCTGGACCTCTTGCTaGGGAGAGTGGCCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PCPVVAYDPSVFHVVLHSCWTSC*GEWPWS
Trigger: AGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCA...CGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp CTCCAGCTTCTTTCCCTGGTAGATGTGCACTCCCCTGAGGGCCAGTCCCAGGATGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LQLLSLVDVHSPEGQSQDGRDSC*TSCWGE
Trigger: CTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC...ATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGGAAAGAAGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPGRDSC*TSCWGE
Trigger: CTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTAGAGGGGTTCAGGTCTaGGAGGAACCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSRGVQV*EEPGSC
Trigger: GCAGGACCCAGGTTCCTCCCAGACCTGAACCCCTCT...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQVQGETVAGPLAGESGPIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGGCCATTGACTGTGGATaGTGGAGGAGGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVAIDCG*WRRVSG
Trigger: GCCAGAGACCCTCCTCCACCATCCACAGTCAATGGC...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCAGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACACCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: VVPTPQTPVVEPLRTGPGPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...CCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGGCCTCTCAGTGCTCTaGGATGGGCCTGAGACTAGC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGGLSVL*DGPETS
Trigger: GCTAGTCTCAGGCCCATCCCAGAGCACTGAGAGGCC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPEGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTCCCTGCACCAGGCCATaGGGCTCAAGCTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLPCTRP*GSSSCL
Trigger: CAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGG...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAGAGGGTCCCCCTGGATaGACCCGTCAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPEGPPG*TRQRGG
Trigger: GCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTC...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTGAGGGTCCCCCTGGATaGACCCGTCAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TSTDISLDSLSQELALMPEGPPG*TRQRGG
Trigger: GCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTC...AGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGAGGAGAGGGTCCCCCTaGATGGACCCGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVRRGSP*MDPSKR
Trigger: CCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCT...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCTTTATTACACGTGCCTaGGGCACACACACGATTCCC +
Preference number: 4 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAFITRA*GTHTIP
Trigger: GGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAA...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGGCCAGCTTCCCAACGTaGGGCCAGGGGAGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVASFPT*GQGRSY
Trigger: GTACGACCTCCCCTGGCCCCACGTTGGGAAGCTGGC...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGCCGCACAGGAATTGTaGGCAGTCTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGAAQEL*AVLPSA
Trigger: TGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAGCCGCACAGGAATTGTaGGCAGTCTTGCCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPAAQEL*AVLPSA
Trigger: TGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGGC...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTTGTGGCGAAGGTGACTaGCAGGGGAAGCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPCGEGD*QGKPGH
Trigger: ATGTCCAGGCTTCCCCTGCCAGTCACCTTCGCCACA...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGCTGCCCCTCCAGGTGTaGGTGACGTGGAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPELPLQV*VTWKGA
Trigger: AGCCCCCTTCCACGTCACCCACACCTGGAGGGGCAG...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCTGCTGCTTTCTGTCTaGGAAGGAGCCCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNLLLSV*EGAPSQ
Trigger: CTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGGGGGTCCACAGGGACTaGGACAGGTGGTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRGVHRD*DRWFSF
Trigger: AAAAGAAAACCACCTGTCCCAGTCCCTGTGGACCCC...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTAGGATGAGCTTTGTCTaGAATTCTCCATCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPRMSFV*NSPSSV
Trigger: CACGGAAGATGGAGAATTCCAGACAAAGCTCATCCT...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACACATTTCCCCCGCCTaGGGAACCCAGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGHISPA*GTQSPW
Trigger: CCATGGACTCTGGGTTCCCCAGGCGGGGGAAATGTG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGCCACACCTCCCAGGTTaGGAGTACATGTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVPHLPG*EYMSAS
Trigger: TGAGGCGGACATGTACTCCCAACCTGGGAGGTGTGG...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGGGCAGGCCTCCTGGATaGAGCACAGCATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEGRPPG*STAWPP
Trigger: AGGAGGCCATGCTGTGCTTCATCCAGGAGGCCTGCC...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTATCCTTGTGCAGCCTaGAGAAGTGCACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: AALGGRPRRGLWVSHFPAYPCAA*RSARAR
Trigger: ACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATA...AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR TCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGTATCCTTGTGCAGCCTaGAGAAGTGCACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWYPCAA*RSARAR
Trigger: ACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATA...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAAGATGTGCACTCCCCTaGGGGCCAGTCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGRCALP*GPVPGS
Trigger: TGATCCTGGGACTGGCCCTCAGGGGAGTGCACATCT...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTTCAAGTGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: SRLPPGERTVTSARAPSSAPAHR*YRTPGS
Trigger: ACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGC...ACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCAPAHR*YRTPGS
Trigger: ACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTTGGGTGCAGGGCTCCTaGCGAGTGGCTTGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TSTDISLDSLSQELALMPWVQGS*RVAWLS
Trigger: TGACAGCCAAGCCACTCGTCAGGAGCCCTGCACCCA...AGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTGGTGGAAGGTATGGCTaGGTGAGGTGGGCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPGGRYG*VRWALG
Trigger: ACCCAGCGCCCACCTCACTCAGCCATACCTTCCACC...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACTATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCTTGCCCAGCTTCTTTCCTGGGGCTGCTTTCTGCCTTTTAACTCAGTGGACCGGCTCCCTGAGACCCTaGGGGAAAGAGCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: TLPSFFPGAAFCLLTQWTGSLRP*GKELPG
Trigger: ACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCC...GGTCCACTGAGTTAAAAGGCAGAAAGCAGCCCCAGGAAAGAAGCTGGGCAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTCATGCTTGTCTCCAGTaGGCTGGAGGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVHACLQ*AGGWCG
Trigger: GCCACACCACCCTCCAGCTCACTGGAGACAAGCATG...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGCCCTGTGGTCGCCCTaGAGCTCTGTTCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVALWSP*SSVLEV
Trigger: TACTTCCAGAACAGAGCTTCAGGGCGACCACAGGGC...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp TATGACCCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGAGATCTCCTCATGGCTaGGCCCTGGAGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: YDPSVFHVVLHSEEGHEGRSPHG*ALESSS
Trigger: CGAGGAGGACTCCAGGGCTCAGCCATGAGGAGATCT...CCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACGACTGGCCTGTTCGTaGTGGAAGAGGCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPRLACS*WKRLAC
Trigger: GCAGGCCAGCCTCTTCCATCACGAACAGGCCAGTCG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000646385.1
CDS-3UTR TCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACCCGGGCCAGCTTCACTaGTGCTTCCACAAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADPGQLH*CFHKLG
Trigger: CCCTAACTTGTGGAAGCATCAGTGAAGCTGGCCCGG...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCTCTTTTCCTCTCCACTaGCAGGGTAAGACAGGGATT +
Preference number: 4 (lower is better)
Translates to: LDGPVKEAASMHAALHQASFPLH*QGKTGI
Trigger: AATCCCTGTCTTACCCTGTCAGTGGAGAGGAAAAGA...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGCTGAGAAACCCAGCCTaGACAAGCTCTCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQLRNPA*TSSLGR
Trigger: ACGACCCAGAGAGCTTGTTCAGGCTGGGTTTCTCAG...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTGTGACGGATGAACCCTaGGTGGAAGGGGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPVTDEP*VEGAAC
Trigger: ACAGGCGGCCCCTTCCACTCAGGGTTCATCCGTCAC...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTCGGGGGCACCGCCATaGTGTCGTTACTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLSGAPP*CRYSAL
Trigger: GAGGGCCGAGTAACGACAGCATGGCGGTGCCCCCGA...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000283309.10
CDS-3UTR GCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCA +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSATLHT*WKSSRP
Trigger: TGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGGTGCCGTGCCCTGTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGCAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: QVPCPVVAYDPSVFHVVLQRPKN*ASLMLA
Trigger: GGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTG...CAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGGCACGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCC +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPQRPKN*ASLMLA
Trigger: GGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTG...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTGCAGCGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 4 (lower is better)
Translates to: LGGRPRRGLWVSHFPACSVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...GCTGCAAGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp CCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 4 (lower is better)
Translates to: PSVFHVVLHSEEGHEGGSVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...AGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp GTAAACCAGCTTCTGTGCTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTTCTTTGCAGCCTGAAGAAGTaGACGGGCACGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VNQLLCCGQPIQLDLQLLCSLKK*TGTSSS
Trigger: GCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCA...AAGAAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCATCCTTCTTATCCTTGTaGAGCCTGAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPSFLSL*SLKKCT
Trigger: CGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGA...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCTCCTTCTTATCCTTGTaGAGCCTGAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: SLCSLKKCTGTSSSRQASSFLSL*SLKKCT
Trigger: CGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGA...GGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CAGGTGCCGTGCCCTGTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: QVPCPVVAYDPSVFHVVLVNQLL*CGQPIQ
Trigger: CTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC...CAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGGCACGGCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNVNQLL*CGQPIQ
Trigger: CTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTATTTCCTGGATCTGGTaGACGGCCTCGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVISWIW*TASALW
Trigger: CCAGAGCGCCGAGGCCGTGCACCAGATCCAGGAAAT...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGGCCAGCTGGTGCAGCTaGATGTCGTCCAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEASWCS*MSSRPW
Trigger: CCATGGCCTGGACGACATGCAGCTGCACCAGCTGGC...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNLLGGW*LHHKLL
Trigger: CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: RSAALGGRPRRGLWVSHFLLGGW*LHHKLL
Trigger: CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG...GAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR GCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGCAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGACAGTGTGGGAAACTaGAGAGCTGTCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPDSVGN*RAVSPG
Trigger: CCCTGGAGAGACAGCTCTGCAGTTTCCCACACTGTC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTCAGAGCAGGTGCCATaGACAGCTAGTCCCCCACTC +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVSEQVP*TASPPL
Trigger: GAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQERGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGTGGGGCTCAAGCTCATaGTTGTCTCCAGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWWGSSS*LSPVSW
Trigger: CCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCA...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTTGGGGCTCAAGCTCATaGTTGTCTCCAGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCWGSSS*LSPVSW
Trigger: CCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCA...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGGCCCCGGCTGGGTGTGTCTGAGCTGGTAGCCCACATGGGCTTCATGTGGCCTCAAGCAGGAGGCATCTaGTCGGGTTCTTTATTACAC +
Preference number: 4 (lower is better)
Translates to: RPRLGVSELVAHMGFMWPQAGGI*SGSLLH
Trigger: GTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTG...AGGCCACATGAAGCCCATGTGGGCTACCAGCTCAGACACACCCAGCCGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TATGACCCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGGTAGTACAGGTGCCGTaGCCTGTGGTCGCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: YDPSVFHVVLHSEEGHEGVVQVP*PVVALK
Trigger: CTTCAGGGCGACCACAGGGCACGGCACCTGTACTAC...CCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGTGGAGGTCCTTGGCCTaGTCCTTGGGGGTCCACAGG +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEWRSLA*SLGVHR
Trigger: CCTGTGGACCCCCAAGGAGCAGGCCAAGGACCTCCA...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCCAGGAGCAGGGTCTaGCGCCTCCCACACCCCACC +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEPRSRV*RLPHPT
Trigger: GGTGGGGTGTGGGAGGCGGCAGACCCTGCTCCTGGG...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTCAGGCCTCTCAGGACTaGGTTCCATACATCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVQASQD*VPYIAP
Trigger: GGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTG...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGCAGTTGCTCCCGGCTaGGCAGCAGCACGAGGACAT +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEAVAPG*AAARGH
Trigger: ATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDTLHTC*KSSRPV
Trigger: TACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGT...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCACGAAGGGGGCTCTaGGTTTCTCATTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPRRGL*VSHFLH
Trigger: ATGAAGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAAGGTGCAGCAGGTGCCTaGACCGCCAGGTGCACCCCG +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEGAAGA*TARCTP
Trigger: CGGGGTGCACCTGGCGGTCCAGGCACCTGCTGCACC...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTTTCTCATGGAGCCCGTaGACCTCCAAGGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVFSWSP*TSKGTS
Trigger: GGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAA...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTGGCTGGTCCTGGGGCTaGAGGACGGCTCCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERAGWSWG*RTAPSH
Trigger: ATGAGAAGGAGCCGTCCTCCAGCCCCAGGACCAGCC...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGGGCGAGACAGTTGCTaGACCTCTTGCTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVGRDSC*TSCWGE
Trigger: CTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCC...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAHKLLW*SLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTC +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPVLLGG*CLHHKL
Trigger: GAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTAC...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTC +
Preference number: 4 (lower is better)
Translates to: SQTLNWLPETLRERAPGCVLLGG*CLHHKL
Trigger: GAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTAC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAA +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGDGTAG*VVPTPQ
Trigger: TTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAA +
Preference number: 4 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLDGTAG*VVPTPQ
Trigger: TTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTC...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCACCTGTGGAGCGTGCTaGCTGCGGAAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCTCGAC*LRKCRQ
Trigger: CTGCCTGCACTTCCGCAGCCAGCACGCTCCACAGGT...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: CGGASPNRSRARQLLDLLLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...CAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCATTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAAGCCAGACCTTGAACTaGCTCCCTGAGACCCTGAGG +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPSQTLN*LPETLR
Trigger: CCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSNTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTNTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACCAGGGGCCAACACCATaGCTCTCTGGACACTTGACA +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHQGPTP*LSGHLT
Trigger: TGTCAAGTGTCCAGAGAGCCATGGTGTTGGCCCCTG...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGTCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATTTGGAAGCCCTGGCTTaGAAGGGAAAGCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHLEALA*KGKHSH
Trigger: ATGGCTGTGCTTTCCCTTCCAAGCCAGGGCTTCCAA...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCACCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCCCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERARSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCAGGTCGCACTACCCGTaGAGCCCACCGGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCRSHYP*SPPDQS
Trigger: GCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCT...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGEGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATAGCTGGAGGGTGGTGTaGCGTGGTCTTCACCACACA +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNSWRVV*RGLHHT
Trigger: TGTGTGGTGAAGACCACGCCACACCACCCTCCAGCT...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACGCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTGCCCTGTGGTCGCTTATCGTGATGGAAGAGGCTaGCCTGCCACGTTCGTGATG +
Preference number: 4 (lower is better)
Translates to: HALLQVAVVQVPCPVVAYRDGRG*PATFVM
Trigger: CATCACGAACGTGGCAGGCCAGCCTCTTCCATCACG...ATAAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGTGATGGAAGAGGCTaGCCTGCCACGTTCGTGATG +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPRDGRG*PATFVM
Trigger: CATCACGAACGTGGCAGGCCAGCCTCTTCCATCACG...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCTTGTGCAGCCTGAAGAAGTGCACGGGCACGTCCTCCAGCCGGCAGGCCTCCTCTTGTCTTCTCGACTaGCCTGTTCGTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: SLCSLKKCTGTSSSRQASSCLLD*PVRDGR
Trigger: TCTTCCATCACGAACAGGCCAGTCGAGAAGACAAGA...GGAGGCCTGCCGGCTGGAGGACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGTGCGGACAGCCCCTCTaGACGGAGCAGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWCGQPL*TEQFIS
Trigger: AGAAATGAACTGCTCCGTCCAGAGGGGCTGTCCGCA...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp GCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTGCGGACAGCCCCTCTaGACGGAGCAGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: AALGGRPRRGLWVSHFPACGQPL*TEQFIS
Trigger: AGAAATGAACTGCTCCGTCCAGAGGGGCTGTCCGCA...AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATCCACGAAGGGGGCTCTaGGTTTCTCATTTCCCTAGT +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHPRRGL*VSHFPS
Trigger: ACTAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp TCGTCCAGGCCATGGCTGTGCTGCTCCTCACTGACCCCGGCTGTCATTTCCTGGGCCCAGCTTCTTTCCTaGGGCTGCTTTCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SSRPWLCCSSLTPAVISWAQLLS*GCFLPF
Trigger: AAAAGGCAGAAAGCAGCCCCAGGAAAGAAGCTGGGC...CCAGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCCGAATGCTAGTTCCACATaGCTGGGGAAGCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: PASSSCLGFSPRAELLRPNASST*LGKPHN
Trigger: ATTGTGAGGCTTCCCCAGCCATGTGGAACTAGCATT...CGGCCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGAACGCAGCCTTCTGTaGCCGATGCCCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVERSLL*PMPLSE
Trigger: CTCACTCAGGGGCATCGGCCACAGAAGGCTGCGTTC...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACTTCCCTCATGGTCCATaGGACTGGGCTCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHFPHGP*DWALAS
Trigger: GGAAGCAAGAGCCCAGTCCCATGGACCATGAGGGAA...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGGTGTACCTTCCCTCATaGTCCATGGGACTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVVYLPS*SMGLGS
Trigger: AGAGCCCAGTCCCATGGACCATGAGGGAAGGTACAC...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCCCACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCATGCAAAAAGAAAGGTTaGCTTCCCCGACTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: AHMGFMWPAWPSPLGQVSCKKKG*LPRLPA
Trigger: TGCGGGAAGTCGGGGAAGCCAACCTTTCTTTTTGCA...TGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATCGTTCTTGCGAGTCTaGACCTGCCAGCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLSFLRV*TCQLDR
Trigger: GCGGTCAAGCTGGCAGGTCCAGACTCGCAAGAACGA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTCGTTCTTGCGAGTCTaGACCTGCCAGCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPSFLRV*TCQLDR
Trigger: GCGGTCAAGCTGGCAGGTCCAGACTCGCAAGAACGA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCGCACAGGAATTGTGGGCAGTCTTGCCCTCGGCAGCACTGGGGCTTGTGGCCAGTCAATTACTGCAGATaGAGCAGGCTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PHRNCGQSCPRQHWGLWPVNYCR*SRLSWR
Trigger: CCTCCAGGAAAGCCTGCTCCATCTGCAGTAATTGAC...TGGCCACAAGCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTCCTGTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGCCCGGGCCTCCCAGATaGGCACCTGAGGACCCCGGC +
Preference number: 4 (lower is better)
Translates to: LQRKKIVIAPERGKSIILPGPPR*APEDPG
Trigger: GCCGGGGTCCTCAGGTGCCCATCTGGGAGGCCCGGG...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGCATACATCGCGCCCCTaGAGGAGGGAACGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEHTSRP*RRERVR
Trigger: CCTGACACGTTCCCTCCTTCAGGGGCGCGATGTATG...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283309.10
CDS-3UTR TCA 90 bp TTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGGATGTTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: LGLRPWRSRCRVGMCRRMLRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...CATCCTCCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR TCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CACCTCAGTGGTCAAGAACGGCCTCCTATTTTATACGGGAGGAAACTGGTGCACCCGGTGAGCGCACTGTaGCCTCAGCACGCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HLSGQERPPILYGRKLVHPVSAL*PQHALL
Trigger: AAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGG...GTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTCTTGACCACTGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCATATCCTTGTGCAGCCTaGAGAAGTGCACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPYPCAA*RSARAR
Trigger: ACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATA...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTATCCTTGTGCAGCCTaGAGAAGTGCACGGGCACGT +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPYPCAA*RSARAR
Trigger: ACGTGCCCGTGCACTTCTTCAGGCTGCACAAGGATA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGAPAHR*YRTPGS
Trigger: ACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTGCTCCAGCTCATCGCTaGTATAGGACTCCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLAPAHR*YRTPGS
Trigger: ACTACCGGGAGTCCTATATCAGCGATGAGCTGGAGC...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVVGLDA*RVGTAV
Trigger: CACGGCAGTTCCTACACGTCAGGCATCAAGGCCAAC...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGCYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTGTTACCTCCCAGGTTaGTGTCAGAGCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SKGTSTDISLDSLSQELACYLPG*CQSQLH
Trigger: GTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACA...GGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCTATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RSAALGGRPRRGLWVSHFYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...GAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTTTCAGGGCACAGGGCTaGACGATTGTGGCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVFRAQG*TIVASQ
Trigger: CTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAA...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAACCACACACAGACAGTaGAGGGGGCAGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGTTHRQ*RGQWCS
Trigger: TGAACACCACTGCCCCCTTCACTGTCTGTGTGTGGT...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCACCACACACAGACAGTaGAGGGGGCAGTGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPTTHRQ*RGQWCS
Trigger: TGAACACCACTGCCCCCTTCACTGTCTGTGTGTGGT...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGCTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTTCTTTCCCAGAAATGCCAGGTCTCAGGATCCTCCTaGGGGACGTCTTTGTTACCC +
Preference number: 4 (lower is better)
Translates to: CCGQPIQLDLQLLSQKCQVSGSS*GTSLLP
Trigger: GGGTAACAAAGACGTCCCTCAGGAGGATCCTGAGAC...CTGGCATTTCTGGGAAAGAAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAAGATCTCCTCATGGCTaGGCCCTGGAGTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPRSPHG*ALESSS
Trigger: CGAGGAGGACTCCAGGGCTCAGCCATGAGGAGATCT...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000646385.1
CDS-3UTR TCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGTACATCGCGCCCCTCTaGATGTCTTGTCTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGYIAPL*MSCLLD
Trigger: GTCGAGAAGACAAGACATTCAGAGGGGCGCGATGTA...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR TCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCGAAGGAAGGCAGAACTaGCACAGGCACAGGACTAAA +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSEGRQN*HRHRTK
Trigger: TTTAGTCCTGTGCCTGTGTCAGTTCTGCCTTCCTTC...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR TCA 90 bp GGAGCCCCCTCCCAGGATGGCCTTCTGCTTCCAGCTCCGCTCCTGCCCCTCCAGTGCCTAAAAGACCTCTaGTCTCAATCTGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GAPSQDGLLLPAPLLPLQCLKDL*SQSVQK
Trigger: TTTTTGCACAGATTGAGATCAGAGGTCTTTTAGGCA...CTGGAGGGGCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGGAGGGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGTCTTTTCCTCTCCACTaGCAGGGTAAGACAGGGATT +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRSFPLH*QGKTGI
Trigger: AATCCCTGTCTTACCCTGTCAGTGGAGAGGAAAAGA...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGAACCACCTCTCCTGTaGGATCCCAGACACACAGGC +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVEPPLL*DPRHTG
Trigger: GCCTGTGTGTCTGGGATCTCACAGGAGAGGTGGTTC...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGAAGGAGCGTGACGGATaGACCCTGAGTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEKERDG*TLSGRG
Trigger: GCCCCTTCCACTCAGGGTTCATCCGTCACGCTCCTT...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGAAGGAGCGTGACGGATaGACCCTGAGTGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEKERDG*TLSGRG
Trigger: GCCCCTTCCACTCAGGGTTCATCCGTCACGCTCCTT...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPELLLTA*RPLRTG
Trigger: CCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAG...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVESAPAD*MQASQD
Trigger: GTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGA...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPSAPAD*MQASQD
Trigger: GTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGA...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTCCTTCTTATCCTTGTaGAGCCTGAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSFLSL*SLKKCT
Trigger: CGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAAACCAGCTTCTGTGCTaGGGGCAGCCCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPNQLLC*GQPIQL
Trigger: CAGCTGGATGGGCTGCCCGCAGCACAGAAGCTGGTT...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGCTGACGTGTAGGAACTaGCGTGGCTGTCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVLTCRN*RGCRRS
Trigger: ACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAG...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGAGGCCATGGCTGTGCTaGTCCTCACTGACCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLRPWLC*SSLTPA
Trigger: AGCCGGGGTCAGTGAGGAGCAGCACAGCCATGGCCT...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCG +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLSRPWL*CSSLTP
Trigger: CGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGA...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGCAGGGCCAGCTGGTaGAGCTGCATGTCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLCRASW*SCMSSR
Trigger: CCTGGACGACATGCAGCTGCACCAGCTGGCCCTGCA...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPRGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWRGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATGGGGCTCAAGCTCATaGTTGTCTCCAGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLWGSSS*LSPVSW
Trigger: CCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTAAGAGGCGGCCTCAATaGACGCAGCCCTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLKRRPQ*TQPCTR
Trigger: CCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTT...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTTCTTTATTACACGTaGCTGGGGCACACACACGAT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVLYYT*LGHTHD
Trigger: ATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGTTCTTTATTACACGTaGCTGGGGCACACACACGAT +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRVLYYT*LGHTHD
Trigger: ATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAAC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCTTCTTTCCCAGAAATaGCAGCTTCCCAACGTGGGG +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGLLSQK*QLPNVG
Trigger: CCCCACGTTGGGAAGCTGGCATTTCTGGGAAAGAAG...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGAATTGTGGGCAGTCTTaGCCTCGGCAGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPENCGQS*PRQHWG
Trigger: GCCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATT...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGAAGAAGATAGTCATTaGCCCGGAGCGGGGCAAATC +
Preference number: 4 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVEEDSH*PGAGQI
Trigger: GATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGCCGATGGGACTGGGCTCTTaGTTCCAAGTTTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: PASSSCLGFSPRAELLRPMGLGS*FQVSSK
Trigger: CTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCAT...CGGCCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAATGGTGGACACCACCTaGTGTGTCTCCCCAACACTG +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGMVDTT*CVSPTL
Trigger: CAGTGTTGGGGAGACACAGCAGGTGGTGTCCACCAT...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTTGGACATGGGGAGTGTaGATGTATGGATGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRWTWGV*MYGCVH
Trigger: ATGCACACATCCATACATGCACACTCCCCATGTCCA...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCAGGCCGTCAATTACTaGAGATGGAGCAGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPQAVNY*RWSRLS
Trigger: GGAAAGCCTGCTCCATCTGCAGTAATTGACGGCCTG...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTTLHTC*KSSRPV
Trigger: TACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGT...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPTLHTC*KSSRPV
Trigger: TACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGT...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACCCACGAAGGGGGCTCTaGGTTTCTCATTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: TLRERAPGCMADRHEVRDPRRGL*VSHFLH
Trigger: ATGAAGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGGTGATGATCCACTGTGGGAAGTAGGAGTGTGGCTCGAAGTACCTCCCGGCTGGGAAGTAGGAGTGTaGCTCGAAGTACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LGDDPLWEVGVWLEVPPGWEVGV*LEVPPG
Trigger: GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCA...GCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATCACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTGGTGATGATCCACTGTaGGAAGTAGGAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASGDDPL*EVGVWL
Trigger: GAGCCACACTCCTACTTCCCACAGTGGATCATCACC...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGAGGGCTCCTGACGAGTaGCTTGGCTGTCACCACGTG +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPERAPDE*LGCHHV
Trigger: CACGTGGTGACAGCCAAGCCACTCGTCAGGAGCCCT...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAGTCATTTCCTGGATCTaGTGCACGGCCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPVISWI*CTASAL
Trigger: GAGCGCCGAGGCCGTGCACCAGATCCAGGAAATGAC...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCGTCATTTCCTGGATCTaGTGCACGGCCTCGGCGCTC +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCVISWI*CTASAL
Trigger: GAGCGCCGAGGCCGTGCACCAGATCCAGGAAATGAC...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTCAGTGGTCAAGAACGGCCTCCTATTTTATACGGGAGGAAACTGGTGCACGGGTGCAGGGCCAGCTaGTGCAGCTGCATGTCGTCC +
Preference number: 4 (lower is better)
Translates to: HLSGQERPPILYGRKLVHGCRAS*CSCMSS
Trigger: GGACGACATGCAGCTGCACCAGCTGGCCCTGCACCC...GTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTCTTGACCACTGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNHKLLW*SLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGCACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVHKLLW*SLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTG...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCACACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPHHKLL*WSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTG...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCTGCGGGCAGCCCATCCAGCTGGATCTCCAGCTTCTTTCCCAGAAATGCCAGCACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: CCGQPIQLDLQLLSQKCQHHKLL*WSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTG...CTGGCATTTCTGGGAAAGAAGCTGGAGATCCAGCTGGATGGGCTGCCCGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATTTACAGGTGAACCTGTaGAGCGTGCTGGCTGCGGAA +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNLQVNL*SVLAAE
Trigger: TTCCGCAGCCAGCACGCTCCACAGGTTCACCTGTAA...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAGAGCTCCCGGGTGTATaGCAGACAGGCATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPELPGV*QTGMRC
Trigger: GCACCTCATGCCTGTCTGCCATACACCCGGGAGCTC...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGAGAGGGGTTCAGGTCTaGGAGGAACCTGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVERGVQV*EEPGSC
Trigger: GCAGGACCCAGGTTCCTCCCAGACCTGAACCCCTCT...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGAGGAGGGTCTCTGGCTaGATCTCAGGTGACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVRRVSG*ISGDRA
Trigger: AGCTCTGTCACCTGAGATCCAGCCAGAGACCCTCCT...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACTTGGAAGCCCTGGCTTaGAAGGGAAAGCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHLEALA*KGKHSH
Trigger: ATGGCTGTGCTTTCCCTTCCAAGCCAGGGCTTCCAA...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCTTGGAAGCCCTGGCTTaGAAGGGAAAGCACAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWALEALA*KGKHSH
Trigger: ATGGCTGTGCTTTCCCTTCCAAGCCAGGGCTTCCAA...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: CGGASPNRSRARQLLDLLGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...CAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTCGGAGAGGCTCCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTTCAGCTCCGGGGCAGTaGGGTCTTTGGAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLSAPGQ*GLWKPW
Trigger: CCAGGGCTTCCAAAGACCCCACTGCCCCGGAGCTGA...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGAGACCCTACCCTGGTaGCCTTCCAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEETLPW*PSRAHR
Trigger: TCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGCCCTGCACCAGGCCATaGGGCTCAAGCTCATGCTTG +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVPCTRP*GSSSCL
Trigger: CAAGCATGAGCTTGAGCCCCATGGCCTGGTGCAGGG...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTCAGGCAGGCTGGTCCTaGTTCAAGCAGGAGGCATCT +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVQAGWS*FKQEAS
Trigger: AGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCTG...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACCCACGAAGGGGGCTCTaGGTTTCTCATTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADPRRGL*VSHFPA
Trigger: AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CCA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGTGTCTCCCCAACACTaGTGTGTACCTTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: CSGHRAERLWPLSALGWAVSPQH*CVPSLM
Trigger: CATGAGGGAAGGTACACACCAGTGTTGGGGAGACAC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTCAGACCCTGCTTCATaGTGGACACCACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSSDPAS*WTPPAV
Trigger: CACAGCAGGTGGTGTCCACCATGAAGCAGGGTCTGA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACTGGCAGGGGAAGCCTaGACATGGGGAGTGTGCATG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPLAGEA*TWGVCM
Trigger: CATGCACACTCCCCATGTCCAGGCTTCCCCTGCCAG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGTGCCCCTGGGGTCTATaGCGTGTGGCGAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVCPWGL*RVAKVT
Trigger: AGTCACCTTCGCCACACGCCATAGACCCCAGGGGCA...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGAATAGGAATCCCCAGTaGGGCCAGAGAAGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQNRNPQ*GQRSFS
Trigger: CGAGAAGCTTCTCTGGCCCCACTGGGGATTCCTATT...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCGGTGTCCATTTTTCTaGAAAATAGCCGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPRCPFF*KIAVLP
Trigger: AGGCAATACGGCTATTTTCCAGAAAAATGGACACCG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCTGGAGCAGGCTTTCCTaGAGGAAGGATGAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSWSRLS*RKDELC
Trigger: ACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCA...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGTCAATTACTGCAGATaGAGCAGGCTTTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHVNYCR*SRLSWR
Trigger: CCTCCAGGAAAGCCTGCTCCATCTGCAGTAATTGAC...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp GAATACCAGCTTTCTCCCGGCAGGGCTGCCCCGGATTaGTTTTCTAACCTTGGCACCTGGAAGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EYQLSPGRAAPD*FSNLGTWKAAS
Trigger: GGAGGCTGCCTTCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCTGGTATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGAGAACTGCGCGTCTCTaGTGCTCGCCACGTTGCACA +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVERTARL*CSPRCT
Trigger: TGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCT...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCTATACTCATTGTTTCTaGCCACACAGAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSYTHCF*PHRGQR
Trigger: TCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTATA...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTGGTCTCGCAGGGGCTATACTCATTGTTTCTaGCCACACAGAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RDSCWTSCWGEWPWSRRGYTHCF*PHRGQR
Trigger: TCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTATA...GCCCCTGCGAGACCAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSLRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGTTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR TCA 90 bp GTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCCCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: VVAYDPSVFHVVLHSEEGPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...GCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR TCA 90 bp ACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGATGCCTGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: TSTDISLDSLSQELALMPVGLDA*RVGTAV
Trigger: CACGGCAGTTCCTACACGTCAGGCATCAAGGCCAAC...AGGCATCAAGGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCTGTGCTGCTCCTCACTaGCCCCGGCTGTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCCAAPH*PRLSFP
Trigger: AGGAAATGACAGCCGGGGTCAGTGAGGAGCAGCACA...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGCTTGAACTGGCTCCCTaGGACCCTGAGGGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVLELAP*DPEGKS
Trigger: GCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAG...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTACATCGCGCCCCTCTaGATGTCTTGTCTTCTCGAC +
Preference number: 4 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSYIAPL*MSCLLD
Trigger: GTCGAGAAGACAAGACATTCAGAGGGGCGCGATGTA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR TCA 90 bp GATGATCCACTGTGGGAAGTAGGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCCCCGTCTCTACTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: DDPLWEVGVWLEVPPGMGPRLYL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGTAGAGACGGGG...GCCCATGCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTACTGATAAACCTTTGTaGATGCACTCGCAGGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETTDKPL*MHSQGR
Trigger: GCGGCCCTGCGAGTGCATTCACAAAGGTTTATCAGT...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAAGCAGGTGCAGCAGGTaGCTGGACCGCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQSRCSR*LDRQVH
Trigger: GTGCACCTGGCGGTCCAGGCACCTGCTGCACCTGCT...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACACTGACGTGTAGGAACTaGCGTGGCTGTCGGCGGAGT +
Preference number: 4 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITLTCRN*RGCRRS
Trigger: ACTCCGCCGACAGCCACGGCAGTTCCTACACGTCAG...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCTGCTGGGTGGGTGGTaGCTACACCACAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERALLGGW*LHHKLL
Trigger: CAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAG...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCACAGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATCAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: SQKGEGPPGWTRQRGGLNQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...ATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAAGCTCTGGCAGCCTGTaGCCATCAGGACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGSSGSL*PSGLSL
Trigger: AAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACGAGGAACCTGGGTCCTaGACAGTGATGACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADEEPGS*TVMTVN
Trigger: GTTCACAGTCATCACTGTGCAGGACCCAGGTTCCTC...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCAGGTTTGCACGTGTaGAGGAGTGTTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPAGLHV*RSVVQG
Trigger: CCCCTGCACAACACTCCTGCACACGTGCAAACCTGC...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTAGAGGACAGCAGGTTTaGACGTGTGCAGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: MEPVDLQGHVHRHLSGFPRGQQV*TCAGVL
Trigger: CAACACTCCTGCACACGTGCAAACCTGCTGTCCTCT...AGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTGCCCTGTGGTCGCTTATGACGGTTTCTCATTTCCCTaGTTGCAGCCTCAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ALLQVAVVQVPCPVVAYDGFSFP*LQPQGS
Trigger: TGAGCCCTGAGGCTGCAAGCAGGGAAATGAGAAACC...GTCATAAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR GCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACGAAGAAGATAGTCATTaGCCCGGAGCGGGGCAAATC +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADEEDSH*PGAGQI
Trigger: GATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTC...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACCCCGGCCTCCTCCTCCTGCTTGGGGTTCAGCCCAAGAGCAGAGCTTCTCAGGATGGGACTGGGCTCTTaGTTCCAAGTTTCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TPASSSCLGFSPRAELLRMGLGS*FQVSSK
Trigger: CTTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCAT...CCTGAGAAGCTCTGCTCTTGGGCTGAACCCCAAGCAGGAGGAGGAGGCCGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCAGCCCCGCTCTCTGCTaGTTTCTGTCTGGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCSPALC*FLSGKE
Trigger: CTCCTTCCCAGACAGAAAGCAGCAGAGAGCGGGGCT...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVTLHTC*KSSRPV
Trigger: TACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGT...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACCCACGAAGGGGGCTCTaGGTTTCTCATTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHPRRGL*VSHFLH
Trigger: ATGAAGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCCACGAAGGGGGCTCTaGGTTTCTCATTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PETLRERAPGCMADRHEVPRRGL*VSHFLH
Trigger: ATGAAGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAATTGGGGCTCAGGCCCTaGCGCTCACGGTGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGELGLRP*RSRCRV
Trigger: TACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAGTCCCAGGATCACGGTaGGACGACCTTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGVPGSR*DDLPSY
Trigger: ATAAGAAGGAAGGTCGTCCCACCGTGATCCTGGGAC...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTGTCCCAGGATCACGGTaGGACGACCTTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLVPGSR*DDLPSY
Trigger: ATAAGAAGGAAGGTCGTCCCACCGTGATCCTGGGAC...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAATGTCGTCCAGGCCATaGCTGTGCTGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPMSSRP*LCCSSL
Trigger: CAGTGAGGAGCAGCACAGCCATGGCCTGGACGACAT...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGATGTCGTCCAGGCCATaGCTGTGCTGCTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEMSSRP*LCCSSL
Trigger: CAGTGAGGAGCAGCACAGCCATGGCCTGGACGACAT...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGACACAAACTCCTGTGGTaGAGCCTCTCCGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGHKLLW*SLSEQV
Trigger: GACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTG...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAA +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERADGTAG*VVPTPQ
Trigger: TTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTC...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGACGGTACTGCTGGGTaGGTGGTGCCTACACCACAA +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEDGTAG*VVPTPQ
Trigger: TTGTGGTGTAGGCACCACCCACCCAGCAGTACCGTC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGATCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCGGTCTTTGGAAGCCCTaGCTTGGAAGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPGLWKP*LGREST
Trigger: TGTGCTTTCCCTTCCAAGCCAGGGCTTCCAAAGACC...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGGGGCAGTGGGGTCTTTaGAAGCCCTGGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLGQWGL*KPWLGR
Trigger: CCTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCC...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCGCCTCATGGCTGAGATaGGAGCAGAGTCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCASWLR*EQSRLQ
Trigger: CTGAAGCCGACTCTGCTCCCATCTCAGCCATGAGGC...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGCCCCAGCCAGGGCAATaGCTTAAGGAAGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEPQPGQ*LKEATC
Trigger: ACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGG...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVRAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGAGGGTGGTGTGGCGTaGTCTTCACCACACACAGAC +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEEGGVA*SSPHTD
Trigger: GTCTGTGTGTGGTGAAGACCACGCCACACCACCCTC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTAGCTGGAGGGTGGTGTaGCGTGGTCTTCACCACACA +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERASWRVV*RGLHHT
Trigger: TGTGTGGTGAAGACCACGCCACACCACCCTCCAGCT...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTAGGAGAGGGTCCCCCTaGATGGACCCGTCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLRRGSP*MDPSKR
Trigger: CCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCT...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTCTTGTCTTCTCGACTaGCCTGTTCGTGATGGAAGA +
Preference number: 4 (lower is better)
Translates to: LAPQEGPLSGRPSACKQESCLLD*PVRDGR
Trigger: TCTTCCATCACGAACAGGCCAGTCGAGAAGACAAGA...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR CCA 90 bp GTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCCCACGAAGGGGGCTCTaGGTTTCTCATTTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VVAYDPSVFHVVLHSEEGPRRGL*VSHFPA
Trigger: AGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGG...GCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTAGGGACTGGGACAGGTaGTTTTCTTTTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPRDWDR*FSFPLH
Trigger: GTGGAGAGGAAAAGAAAACCACCTGTCCCAGTCCCT...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTTGGAGCAGGCTTTCCTaGAGGAAGGATGAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVWSRLS*RKDELC
Trigger: ACAAAGCTCATCCTTCCTCCAGGAAAGCCTGCTCCA...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp GGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCACACCTCTTACAGGTG +
Preference number: 4 (lower is better)
Translates to: GMRCGTCLLPPR*MSEPAPHLLQV
Trigger: CACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
3UTR CAA 72 bp GGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GVWQTGMRCGTC*LPPRLMSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGLRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGCCCTGTGGTCGCTTATaGCCCTTCCGTTTTCCACGT +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVPCGRL*PFRFPR
Trigger: ACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGG...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGGTTGGCCTTGATGCCTaGCGTGTAGGAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLVGLDA*RVGTAV
Trigger: CACGGCAGTTCCTACACGTCAGGCATCAAGGCCAAC...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACCTTGCCCAGCTTCTTTCCTGGGGCTGCTTTCTGCCTTTTAACTCAGTGGACCCACACCTCTTACAGGTaGACCTGTGGAGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLPSFFPGAAFCLLTQWTHTSYR*TCGACW
Trigger: CCAGCACGCTCCACAGGTTCACCTGTAAGAGGTGTG...GGTCCACTGAGTTAAAAGGCAGAAAGCAGCCCCAGGAAAGAAGCTGGGCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCATATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTCTGAGAAACCCAGCCTaGACAAGCTCTCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPLRNPA*TSSLGR
Trigger: ACGACCCAGAGAGCTTGTTCAGGCTGGGTTTCTCAG...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGGTAGTACAGGTGCCGTaGCCTGTGGTCGCTTATGAC +
Preference number: 4 (lower is better)
Translates to: SQVDVRASSTPLTGEPVEVVQVP*PVVAYD
Trigger: GTCATAAGCGACCACAGGGCACGGCACCTGTACTAC...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACTCCTTCTTATCCTTGTaGAGCCTGAAGAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: RKERVPLDGPVKEAASMHSFLSL*SLKKCT
Trigger: CGTGCACTTCTTCAGGCTGCACAAGGATAAGAAGGA...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGTAAACCAGCTTCTGTaGTGCGGGCAGCCCATCCAG +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLVNQLL*CGQPIQ
Trigger: CTGGATGGGCTGCCCGCAGCACAGAAGCTGGTTTAC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAATCCAGGCCATGGCTGTaGTGCTCCTCACTGACCCCG +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGESRPWL*CSSLTP
Trigger: CGGGGTCAGTGAGGAGCAGCACAGCCATGGCCTGGA...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGTGGGGCTCAAGCTCATaGTTGTCTCCAGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEWGSSS*LSPVSW
Trigger: CCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCA...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACAATGCACGCAGCCCTaGACCAGGCCATGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEQCTQP*TRPWGS
Trigger: TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTG...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCAGTTCTTTATTACACGTaGCTGGGGCACACACACGAT +
Preference number: 4 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPVLYYT*LGHTHD
Trigger: ATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAAC...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAACAATGTGGGAATaGTGTTCCGTGGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTKTMWE*CSVVRR
Trigger: CCTTCTCACCACGGAACAGCATTCCCACATTGTTTT...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR GCA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTTGGACATGGGGAGTGTaGATGTATGGATGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPWTWGV*MYGCVH
Trigger: ATGCACACATCCATACATGCACACTCCCCATGTCCA...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGTCCCAGGATCACGGTaGGACGACCTTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVVPGSR*DDLPSY
Trigger: ATAAGAAGGAAGGTCGTCCCACCGTGATCCTGGGAC...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPHHKLL*WSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTCACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPHHKLL*WSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTG...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTC +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPVLLGG*CLHHKL
Trigger: GAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTAC...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAATGCGGACGGTACTGCTaGGTGGGTGGTGCCTACACC +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGECGRYC*VGGAYT
Trigger: GGTGTAGGCACCACCCACCCAGCAGTACCGTCCGCA...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGGGGGAGCTGACAGTGTaGGAAACTGCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEGELTV*ETAELS
Trigger: AGACAGCTCTGCAGTTTCCCACACTGTCAGCTCCCC...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAAAGAGGGGCCTCTGTCTaGCAGGCCCAGCGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGERGASV*QAQRLQ
Trigger: TTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCT...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAATTGACTGTGGATGGTaGAGGAGGGTCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPIDCGW*RRVSGW
Trigger: CCAGCCAGAGACCCTCCTCCACCATCCACAGTCAAT...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CACCTCAGTGGTCAAGAACGGCCTCCTATTTTATACGGGAGGAAACTGGTGCACGGCCTCTCAGTGCTCTaGGATGGGCCTGAGACTAGC +
Preference number: 4 (lower is better)
Translates to: HLSGQERPPILYGRKLVHGLSVL*DGPETS
Trigger: GCTAGTCTCAGGCCCATCCCAGAGCACTGAGAGGCC...GTGCACCAGTTTCCTCCCGTATAAAATAGGAGGCCGTTCTTGACCACTGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAAGGGCTGAACGATTGTaGCCTCTCAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPRAERL*PLSALG
Trigger: TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCT...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACCTTGCCCAGCTTCTTTCCTGGGGCTGCTTTCTGCCTTTTAACTCAGTGGACCAGCTGGAGGGTGGTGTaGCGTGGTCTTCACCACACA +
Preference number: 4 (lower is better)
Translates to: TLPSFFPGAAFCLLTQWTSWRVV*RGLHHT
Trigger: TGTGTGGTGAAGACCACGCCACACCACCCTCCAGCT...GGTCCACTGAGTTAAAAGGCAGAAAGCAGCCCCAGGAAAGAAGCTGGGCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACTTTATTACACGTGCCTaGGGCACACACACGATTCCC +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADFITRA*GTHTIP
Trigger: GGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAA...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTTTATTACACGTGCCTaGGGCACACACACGATTCCC +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVFITRA*GTHTIP
Trigger: GGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCTTTATTACACGTGCCTaGGGCACACACACGATTCCC +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGFITRA*GTHTIP
Trigger: GGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAA...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCGGCTGTCATTTCCTaGATCTCTGCGAGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERAPAVIS*ISAREA
Trigger: AGCCTCTCTCGCAGAGATCCAGGAAATGACAGCCGG...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGCTGCAAGGGAGAAGCTaGATGCAAAAGGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLLQGRS*MQKAGL
Trigger: GAGCCCGGCCTTTTGCATCCAGCTTCTCCCTTGCAG...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR CCA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGACAAAGCACAGGTTTTaGAAAACAATGTGGGAATGC +
Preference number: 4 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLTKHRF*KTMWEC
Trigger: GCATTCCCACATTGTTTTCCAAAACCTGTGCTTTGT...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR CCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGAGTGTCTCCCCAACACTaGTGTGTACCTTCCCTCATG +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGVSPQH*CVPSLM
Trigger: CATGAGGGAAGGTACACACCAGTGTTGGGGAGACAC...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATGTGCATGTAGGTCTTaGCTCAGACCCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLCACRS*LRPCFM
Trigger: CATGAAGCAGGGTCTGAGCCAAGACCTACATGCACA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGCTGGCCGTCCCCTCTTaGGCAAGTCTCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LQRKKIVIAPERGKSIILLAVPS*ASLRAA
Trigger: CGCTGCCCTGAGACTTGCCCAAGAGGGGACGGCCAG...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACTGCAAAAAGAAAGGTTaGCTTCCCCGACTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LNWLPETLRERAPGCMADCKKKG*LPRLPA
Trigger: TGCGGGAAGTCGGGGAAGCCAACCTTTCTTTTTGCA...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCTTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTLRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAAGAGCAGAGTGGGTCCTaGGGCCTCATGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEEQSGS*GLMAEM
Trigger: CATCTCAGCCATGAGGCCTCAGGACCCACTCTGCTC...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATTCCTGGAGGAAGGATaGGCTTTGTCTGGAATTCTC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGFLEEG*ALSGIL
Trigger: GAGAATTCCAGACAAAGCTCATCCTTCCTCCAGGAA...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACAGACAGGCATGAGGTaGGGGACCTGTTTGTTACCT +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPQTGMR*GTCLLP
Trigger: AGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACATGGGGCTCAAGCTCATaGTTGTCTCCAGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITWGSSS*LSPVSW
Trigger: CCAGCTCACTGGAGACAAGCATGAGCTTGAGCCCCA...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGACAAGCAGGAGGCATCTaGTCGGGTTCTTTATTACAC +
Preference number: 4 (lower is better)
Translates to: QWCSGHRAERLWPLSALGQAGGI*SGSLLH
Trigger: GTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTG...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACATGGGAAGTGCCCACATaGTCACATCTGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITWEVPT*SHLSQH
Trigger: GTGCTGGCTCAGATGTGAGCATGTGGGCACTTCCCA...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGCCCAGAGGAGTCCATaGTTCAACACAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLAQRSP*FNTGKR
Trigger: CCTCTTGCCTGTGTTGAAGCATGGACTCCTCTGGGC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPETLHTC*KSSRPV
Trigger: TACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGT...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAACAGTCCAGGGCGCGGTaGAAGGTATGGCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQQSRAR*KVWLSE
Trigger: CTCACTCAGCCATACCTTCCACCGCGCCCTGGACTG...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACACACCACAAACTCCTGTaGTGGAGCCTCTCCGAACAG +
Preference number: 4 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITHHKLL*WSLSEQ
Trigger: CTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTG...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGAACACCATGGCTCTCTaGACACTTGACAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVNTMAL*TLDSQT
Trigger: GGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACATCTCCCAGATTAGGATaGGTGACAGGCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITSPRLG*VTGCLR
Trigger: CCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGA...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGCGGACAGCCCCTCTaGACGGAGCAGTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLCGQPL*TEQFIS
Trigger: AGAAATGAACTGCTCCGTCCAGAGGGGCTGTCCGCA...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CCA 90 bp CGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCTCTGCGAGAGAGGCTTaGCATCTTCCTTTGATGCAT +
Preference number: 4 (lower is better)
Translates to: RSAALGGRPRRGLWVSHFSAREA*HLPLMH
Trigger: ATGCATCAAAGGAAGATGCCAAGCCTCTCTCGCAGA...GAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCACTTCTTCTGGACGGCTaGTTTCCATCCTCTATCATG +
Preference number: 4 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPLLLDG*FPSSIM
Trigger: CATGATAGAGGATGGAAACCAGCCGTCCAGAAGAAG...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR CCA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTAGGGACTGGGACAGGTaGTTTTCTTTTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVRDWDR*FSFPLH
Trigger: GTGGAGAGGAAAAGAAAACCACCTGTCCCAGTCCCT...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTTTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: CTTRGASVWQAQRLQTGVLRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...AACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTTTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASLRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR TCA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAAGCCAGGAGTTGGCCTTaGTGCCTGACGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEARSWP*CLTCRN
Trigger: GTTCCTACACGTCAGGCATCAAGGCCAACTCCTGGC...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGGGCCATTCCTCTAAATaGAGAGGACAGCAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEGHSSK*RGQQVC
Trigger: GCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCC...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACACGGACGGCTTTTTCTaGAAGTTTTACAAACTGATA +
Preference number: 4 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYTDGFF*KFYKLI
Trigger: TATCAGTTTGTAAAACTTGCAGAAAAAGCCGTCCGT...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTGTCCCAGGATCACGGTaGGACGACCTTCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLVPGSR*DDLPSY
Trigger: ATAAGAAGGAAGGTCGTCCCACCGTGATCCTGGGAC...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CGTAGTGCTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCTTAACTCAGTGGACCTaGACTCTTAGCGTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: RSAALGGRPRRGLWVSHFLTQWT*TLSVWC
Trigger: ACACCAAACGCTAAGAGTCCAGGTCCACTGAGTTAA...GAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAGCACTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CCA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGGAACGCAGCCTTCTGTaGCCGATGCCCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LQRKKIVIAPERGKSIILERSLL*PMPLSE
Trigger: CTCACTCAGGGGCATCGGCCACAGAAGGCTGCGTTC...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGCACATTTCCCCCGCCTaGGGAACCCAGAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: LQRKKIVIAPERGKSIILHISPA*GTQSPW
Trigger: CCATGGACTCTGGGTTCCCCAGGCGGGGGAAATGTG...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTATACTCATTGTTTCTaGCCACACAGAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVYTHCF*PHRGQR
Trigger: TCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTATA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATTTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAATATGGCAGACAGGCATaGGGTGCGGGACCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEYGRQA*GAGPVC
Trigger: ACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATA...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp AGGGATGCACGGGCCATTCCTCTAAATGCAGAGGACAGCAGGTTTGCACGTGTGGTTCTTTATTACACGTaGCTGGGGCACACACACGAT +
Preference number: 4 (lower is better)
Translates to: RDARAIPLNAEDSRFARVVLYYT*LGHTHD
Trigger: ATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAAC...CACACGTGCAAACCTGCTGTCCTCTGCATTTAGAGGAATGGCCCGTGCATCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCAAGCAGGAGGCATCTaGTCGGGTTCTTTATTACAC +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERAQAGGI*SGSLLH
Trigger: GTGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTG...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAGTACTGCTGGGTGGGTaGTGCCTACACCACAAACTC +
Preference number: 4 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQVLLGG*CLHHKL
Trigger: GAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTAC...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGTGCATGTAGGTCTTaGCTCAGACCCTGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLCACRS*LRPCFM
Trigger: CATGAAGCAGGGTCTGAGCCAAGACCTACATGCACA...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp AGCTTTCTCCCGGCAGGGCTGCCCCGGATTTGTTTTCTAACCTTGGCACCTGGATATACTCATTGTTTCTaGCCACACAGAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SFLPAGLPRICFLTLAPGYTHCF*PHRGQR
Trigger: TCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTATA...TCCAGGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCTGCCGGGAGAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGTTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGTTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PLSGRPSACKQELQRGVQFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTTGCCTAAAAGACCTCTaGTCTCAATCTGTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETCLKDL*SQSVQK
Trigger: TTTTTGCACAGATTGAGATCAGAGGTCTTTTAGGCA...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTTTCCTGGAGGAAGGATaGGCTTTGTCTGGAATTCTC +
Preference number: 4 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLFLEEG*ALSGIL
Trigger: GAGAATTCCAGACAAAGCTCATCCTTCCTCCAGGAA...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAATCAATCATCTTGGCCCAGAGGAGTCCATaGTTCAACACAGGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: LQRKKIVIAPERGKSIILAQRSP*FNTGKR
Trigger: CCTCTTGCCTGTGTTGAAGCATGGACTCCTCTGGGC...CAAGATGATTGATTTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGTGGACTCTTAGCGTTTaGTGTAATTTAGGATCAGGT +
Preference number: 4 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVWTLSV*CNLGSG
Trigger: ACCTGATCCTAAATTACACCAAACGCTAAGAGTCCA...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR TCA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCATTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPLRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTTTGAGAAGTACTTGCTaGGCTTTTGCTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERALRSTC*AFAPNP
Trigger: TGGATTTGGAGCAAAAGCTCAGCAAGTACTTCTCAA...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTTTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSLCPSGLSLGELTVWETFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR GCA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCACGGACGGCTTTTTCTaGAAGTTTTACAAACTGATA +
Preference number: 4 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGTDGFF*KFYKLI
Trigger: TATCAGTTTGTAAAACTTGCAGAAAAAGCCGTCCGT...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CCA 90 bp ACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCGGTGTCCATTTTTCTaGAAAATAGCCGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: TLDSQTLNWLPETLRERARCPFF*KIAVLP
Trigger: AGGCAATACGGCTATTTTCCAGAAAAATGGACACCG...AGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAAGTCTGCAGCCATAGCTaGCAATTCGACTCATGGTAT +
Preference number: 4 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEVCSHS*QFDSWY
Trigger: ATACCATGAGTCGAATTGTCAGCTATGGCTGCAGAC...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR GCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAAGTTCTTTATTACACGTaGCTGGGGCACACACACGAT +
Preference number: 4 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQVLYYT*LGHTHD
Trigger: ATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAAC...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAATATACTCATTGTTTCTaGCCACACAGAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQYTHCF*PHRGQR
Trigger: TCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTATA...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR TCA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAATTTCTTCCAATCTTTTaGGAAGTACTTGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQFLPIF*EVLAEL
Trigger: AAGCTCAGCAAGTACTTCTCAAAAGATTGGAAGAAA...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCAGCACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: MGRLPVLAQVSLQRAGSQHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...CTGGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp CCCTACGCGGGCCCCACACACCCACAGGGCCCTCAGTGCCCCTCAAGGCGAAAGCACGGCCAGCCGCAGTaGCTCCCGGCTGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PYAGPTHPQGPQCPSRRKHGQPQ*LPAGQQ
Trigger: CTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTG...CTTTCGCCTTGAGGGGCACTGAGGGCCCTGTGGGTGTGTGGGGCCCGCGTAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 5 (lower is better)
Translates to: LDGPVKEAASMHAALHQAPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCACACGGCCAGCCGCAGTaGCTCCCGGCTGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSHGQPQ*LPAGQQ
Trigger: CTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTG...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: PASLTADLARATGLTTPARHVAH*LEKLAA
Trigger: GGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCG...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS CCA 90 bp TGGAAGAGGCTGGCCTGCCACGTTCGTGATGTCAGGGCCGGGCAGTaGACGGGCAGAGGCCGCGAGGAAGAGGAGACCACCGCCCAGATC +
Preference number: 5 (lower is better)
Translates to: WKRLACHVRDVRAGQ*TGRGREEEETTAQI
Trigger: GATCTGGGCGGTGGTCTCCTCTTCCTCGCGGCCTCTGCCCGTCCACTGCCCGGCCCTGACATCACGAACGTGGCAGGCCAGCCTCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS-3UTR CAA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCCACGGCCAGCCGCAGTaGCTCCCGGCTGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSHGQPQ*LPAGQQ
Trigger: CTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTG...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283309.10
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: RHGPTPGARPGQPAARRQLMLAT*HTCWKS
Trigger: GCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAG...CTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCCCTGGCCGTCCCCTCTaGGGCAAGTCTCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAPGRPL*GKSQGS
Trigger: GCTGCCCTGAGACTTGCCCAAGAGGGGACGGCCAGG...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCAGCGGCTTCTGCTGTTaGCAGGCCACCCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: PWWPSRAHRTEVALPVEPSGFCC*QATPSP
Trigger: AGGGCTGGGGGTGGCCTGCAAACAGCAGAAGCCGCT...GGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTGCCAGCTTGACCGCTGACCTGGCCCGGGCCACAGGACTGACCACCCCAGCCCTCTCTGGGTCGTTCTaGCGAGTCTGGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: PASLTADLARATGLTTPALSGSF*RVWTCQ
Trigger: CTGGCAGGTCCAGACTCGCAAGAACGACCCAGAGAG...GGCTGGGGTGGTCAGTCCTGTGGCCCGGGCCAGGTCAGCGGTCAAGCTGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS GCA 90 bp CGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: RGHRVHSQGRLLLTA*RPLRTGFHTSRPRP
Trigger: GGGCCGAGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS-3UTR CAA 90 bp ACGTGTAGGAACTGCCGTGGCTGTCGGCGGAGTGGCGTGAGAGGCAGTGGGGGCCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: TCRNCRGCRRSGVRGSGGRHVAH*LEKLAA
Trigger: GGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCG...GCCCCCACTGCCTCTCACGCCACTCCGCCGACAGCCACGGCAGTTCCTACACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCCACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTCCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 5 (lower is better)
Translates to: SQTLNWLPETLRERAPGCPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GCCTCCTTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: ASLGLRPWRSRCRVGMCRLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...CCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGCCTGCCGCACAGGAATaGTGGGCAGTCTTGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GGLPEPTEPRSHYPWSPPPAAQE*WAVLPS
Trigger: CGAGGGCAAGACTGCCCACAATTCCTGTGCGGCAGG...CGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCTCTGGACCTGCCAGCTaGACCGCTGACCTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: TWASCGLPGRPLLGKSQGSGPAS*TADLAR
Trigger: CCGGGCCAGGTCAGCGGTCAAGCTGGCAGGTCCAGA...GCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS TCA 90 bp GCCAGCACGGCACAGGCCCACACTCTTCCTGGAGCGGGGCACAGGTaGCTTGCTGCCACCAAGGAGCCACTAGATGAGGCTCCACCTGCC +
Preference number: 5 (lower is better)
Translates to: ASTAQAHTLPGAGHR*LAATKEPLDEAPPA
Trigger: GGCAGGTGGAGCCTCATCTAGTGGCTCCTTGGTGGCAGCAAGTCACCTGTGCCCCGCTCCAGGAAGAGTGTGGGCCTGTGCCGTGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS TCA 90 bp TCGACTGGCCTGTTCGTGATGGAAGAGGCTGGCCTGCCACGTTCGTaGTGTCAGGGCCGGGCAGTGGACGGGCAGAGGCCGCGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: STGLFVMEEAGLPRS*CQGRAVDGQRPRGR
Trigger: TCTTCCTCGCGGCCTCTGCCCGTCCACTGCCCGGCCCTGACATCACGAACGTGGCAGGCCAGCCTCTTCCATCACGAACAGGCCAGTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS GCA 90 bp AGCGTTCAAGAACATCTGCAAAGGCGGGCTTCGGGCGGGCACACCTaGTTGCAGCCTCAGGGCTCACCACAGTCCCCCTGCGGACAGCCC +
Preference number: 5 (lower is better)
Translates to: SVQEHLQRRASGGHT*LQPQGSPQSPCGQP
Trigger: GGGCTGTCCGCAGGGGGACTGTGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS GCA 90 bp CGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCCTTCCGG +
Preference number: 5 (lower is better)
Translates to: RGHRVHSQGRLLLTA*RPLRTGFHTSRPFR
Trigger: CCGGAAGGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644440.1
CDS CCA 90 bp GCTGTGTCCCTGCAGGGCCAGCACGGCACAGGCCCACACTCTTCCTaGAGCGGGGCACAGGTGACTTGCTGCCACCAAGGAGCCACTAGA +
Preference number: 5 (lower is better)
Translates to: AVSLQGQHGTGPHSS*SGAQVTCCHQGATR
Trigger: TCTAGTGGCTCCTTGGTGGCAGCAAGTCACCTGTGCCCCGCTCCAGGAAGAGTGTGGGCCTGTGCCGTGCTGGCCCTGCAGGGACACAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS-3UTR CAA 90 bp CACGCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTGCCCTGTGGTCGCTTATCACGGCCAGCCGCAGTaGCTCCCGGCTGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: HALLQVAVVQVPCPVVAYHGQPQ*LPAGQQ
Trigger: CTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTG...ATAAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CAA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSRHVAH*LEKLAA
Trigger: GGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCCTTCCTTCTTATCCTaGTGCAGCCTGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: GMGRLPVLAQVSLQRAGSPSFLS*CSLKKC
Trigger: GCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGG...GCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp CTCCAGCTTCTTTCCCTGGTAGATGTGCACTCCCCTGAGGGCCAGTCCCAGGATCCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 5 (lower is better)
Translates to: LQLLSLVDVHSPEGQSQDPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...ATCCTGGGACTGGCCCTCAGGGGAGTGCACATCTACCAGGGAAAGAAGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CAA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCCTCCTGACGAGTGGCTaGGCTGTCACCACGTGTGCT +
Preference number: 5 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCLLTSG*AVTTCA
Trigger: AGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAG...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGGGGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: WGWRTAPSHGARGPPRARQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...ACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCCAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LDGPVKEAASMHAALHQAQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCACAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCACCCACACCTCCCAGGTaGGGAGTACATGTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSPTPPR*GVHVRL
Trigger: GAGGCGGACATGTACTCCCAACCTGGGAGGTGTGGG...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGCTGCAGGACCGGCATaGCCTACCACGTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLAAGPA*PTTSSL
Trigger: GAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGC...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS GCA 90 bp GTTCCGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCCTG +
Preference number: 5 (lower is better)
Translates to: VPRPSRPFPGSAPAD*MQASQDWVPYIAPL
Trigger: CAGGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283309.10
CDS GCA 90 bp GTTCCGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: VPRPSRPFPGSAPAD*MQASQDWVPYIAPS
Trigger: CGAGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 90 bp GTTCCGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: VPRPSRPFPGSAPAD*MQASQDWVPYIAPL
Trigger: GAGGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCGGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS CCA 90 bp CAAGTGGCAGTAGTACAGGTGCCGTGCCCTGTGGTCGCTGGAAGGTaGCAGGGAGTGAGTTCCAGGACGACCGGTGTGGGGACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: QVAVVQVPCPVVAGR*QGVSSRTTGVGTAG
Trigger: GCCAGCAGTCCCCACACCGGTCGTCCTGGAACTCACTCCCTGCCACCTTCCAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGRHVAH*LEKLAA
Trigger: GGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACACAGCATGGCCTCCTaGGGGCTCAGGCCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLHSMAS*GLRPWR
Trigger: GCGCCAGGGCCTGAGCCCCAAGGAGGCCATGCTGTG...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCTCCTGACGAGTGGCTaGGCTGTCACCACGTGTGCT +
Preference number: 5 (lower is better)
Translates to: TRQRGGLNARSPAPGHGALLTSG*AVTTCA
Trigger: AGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAG...AGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGCAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGTCCAGGGCGAGACAGTaGCTGGACCTCTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGSRARQ*LDLLLG
Trigger: CCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGA...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGTCCAGGGCGAGACAGTaGCTGGACCTCTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLSRARQ*LDLLLG
Trigger: CCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGA...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: GVWLEVPPGMGRLPVLAQRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...CTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSTVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSTVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: LEVPPGMGRLPVLAQVSLACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...CAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp CTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCTGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LDGPVKEAASMHAALHQAWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...GGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGGCCATGGGGCTCATGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: PSKRRPQCTQPCTRPWGSWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...TGAGCCCCATGGCCTGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: TWASCGLPGRPLLGKSQGVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...GCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGGCGGGCACACCTGCTaGCAGCCTCAGGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGGGHTC*QPQGSP
Trigger: TGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCC...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp CAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGAATTGTGGGCAGTCTaGCCCTCGGCAGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: QLVPHSPSVTKASPLRQLELWAV*PSAALG
Trigger: CCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTC...CAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACATGGGCTTCATGTGGCCTGCCTGGCCGTCCCCTCTTGGGCAAGTCTCAGGGCGGGCTGATGCTCGGCTaGGGAACCACCTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: TWASCGLPGRPLLGKSQGGLMLG*GTTSPV
Trigger: CACAGGAGAGGTGGTTCCCAAGCCGAGCATCAGCCC...GCCCTGAGACTTGCCCAAGAGGGGACGGCCAGGCAGGCCACATGAAGCCCATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS TCA 90 bp CTGTGTTCCGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTaGCTGCATGCAGGCCTCTCAGGACTGGGTTCCATACATCGCGCC +
Preference number: 5 (lower is better)
Translates to: LCSEAIASIPRVGSC*LHAGLSGLGSIHRA
Trigger: GGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCGGAACACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS TCA 90 bp TGGAGCGGGGCACAGGTGACTTGCTGCCACCAAGGAGCCACTAGATaGGGCTCCACCTGCCGAGGTCCCACTCCTTCCCCAGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: WSGAQVTCCHQGATR*GSTCRGPTPSPVSL
Trigger: CAAGCTCACTGGGGAAGGAGTGGGACCTCGGCAGGTGGAGCCTCATCTAGTGGCTCCTTGGTGGCAGCAAGTCACCTGTGCCCCGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS TCA 90 bp GAGGCCGCGAGGAAGAGGAGACCACCGCCCAGATCTCCTCATGGCTaGGCCCTGGAGTCCTCCTCGGCCCAACTCTCTCTTCTTCTGGAC +
Preference number: 5 (lower is better)
Translates to: EAARKRRPPPRSPHG*ALESSSAQLSLLLD
Trigger: GTCCAGAAGAAGAGAGAGTTGGGCCGAGGAGGACTCCAGGGCTCAGCCATGAGGAGATCTGGGCGGTGGTCTCCTCTTCCTCGCGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS GCA 90 bp CACTCCTTCCCCAGTGAGCTTGGCCTTCACCAAACCAAGCCCCAGTaGAGGAGAGGTGCACAGAGCCCGGGCGACTCGAATCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: HSFPSELGLHQTKPQ*RRGAQSPGDSNPWR
Trigger: CCTCCAGGGATTCGAGTCGCCCGGGCTCTGTGCACCTCTCCTGCACTGGGGCTTGGTTTGGTGAAGGCCAAGCTCACTGGGGAAGGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 90 bp CGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: RGHRVHSQGRLLLTA*RPLRTGFHTSRPSE
Trigger: TTCAGAGGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS GCA 90 bp GTTCCGAGGCCATCGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTaGATGCAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCCTT +
Preference number: 5 (lower is better)
Translates to: VPRPSRPFPGSAPAD*MQASQDWVPYIAPL
Trigger: AAGGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCGATGGCCTCGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644440.1
CDS CCA 90 bp CCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTAGCCTTCACCCCCACGGCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PKNCASLMLATLHTC*KSSRPVAFTPTASR
Trigger: GCGGCTGGCCGTGGGGGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CCA 90 bp CCTGGCTCCCAGAGCTCACCGCCCAGCACGGGGCTTGGCCATGGCTaGTATTCATTAATCACAGGCCAGGTGGAGGCTCGCCCAAGATGC +
Preference number: 5 (lower is better)
Translates to: PGSQSSPPSTGLGHG*YSLITGQVEARPRC
Trigger: GCATCTTGGGCGAGCCTCCACCTGGCCTGTGATTAATGAATACCAGCCATGGCCAAGCCCCGTGCTGGGCGGTGAGCTCTGGGAGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 90 bp GGCAGAGGCCGCGAGGAAGAGGAGACCACCGCCCAGATCTCCTCATaGCTGAGCCCTGGAGTCCTCCTCGGCCCAACTCTCTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GRGREEEETTAQISS*LSPGVLLGPTLSSS
Trigger: AGAAGAAGAGAGAGTTGGGCCGAGGAGGACTCCAGGGCTCAGCCATGAGGAGATCTGGGCGGTGGTCTCCTCTTCCTCGCGGCCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS-3UTR CAA 90 bp GTCGCCCTGAAGCTCTGTTCTGGAAGTAAGTCTCAGGATCCTCCTGAGGGACGTCACGGCCAGCCGCAGTaGCTCCCGGCTGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: VALKLCSGSKSQDPPEGRHGQPQ*LPAGQQ
Trigger: CTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTG...ACGTCCCTCAGGAGGATCCTGAGACTTACTTCCAGAACAGAGCTTCAGGGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCACCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 5 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TTCCTCTCCACTGACAGGGTAAGACAGGGATTGGGGACTTTACCCTGTGCCCCTCCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 5 (lower is better)
Translates to: FLSTDRVRQGLGTLPCAPPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...AGGGGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCTGTCAGTGGAGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCTCCTGACGAGTGGCTaGGCTGTCACCACGTGTGCT +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGLLTSG*AVTTCA
Trigger: AGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACCAGCCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: HSPSVTKASPLRQLGCTSLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...GCTGGTGCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: VEPTGSEQVPCTASPPLSTVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...GGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTCATGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: LQHRQEGTGHTLPRATLSWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...TGACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGGGGCTGGAGGACGGCTCCTTCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCACAGGGCTGAACGATaGTGGCCTCTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: WGWRTAPSHGARGPPRARHRAER*WPLSAL
Trigger: CAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTG...ACGTGCCCTTGGAGGTCCACGGGCTCCATGAGAAGGAGCCGTCCTCCAGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp AGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCACAGGGCTGAACGATaGTGGCCTCTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SPPLSVCHQSFAPPPAGLHRAER*WPLSAL
Trigger: CAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTG...CAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GTAGGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCTTCTCATTTCCCTGCTaGCAGCCTCAGGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: VGVWLEVPPGMGRLPVLAFSFPC*QPQGSP
Trigger: TGGTGAGCCCTGAGGCTGCAAGCAGGGAAATGAGAA...GGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTTCGAGCCACACTCCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CAA 90 bp CTGAGATGGGAGCAGAGTCGGCTTCAGCTCCGGGGCAGTGGGGTCTTTGGAAGCCGGCAGCACTGGGGCTaGTGGCCATCTACAGAACGC +
Preference number: 5 (lower is better)
Translates to: LRWEQSRLQLRGSGVFGSRQHWG*WPSTER
Trigger: GCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCG...GCTTCCAAAGACCCCACTGCCCCGGAGCTGAAGCCGACTCTGCTCCCATCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCACCTGGCCGTCCCCTCTaGGGCAAGTCTCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPPGRPL*GKSQGS
Trigger: GCTGCCCTGAGACTTGCCCAAGAGGGGACGGCCAGG...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTAGCGGCTTCTGCTGTTaGCAGGCCACCCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: SQTLNWLPETLRERAPGCSGFCC*QATPSP
Trigger: AGGGCTGGGGGTGGCCTGCAAACAGCAGAAGCCGCT...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS TCA 90 bp ACTGCATGCAGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCCTaGAGGAGGGAACGTGTCAGGGTTTGTCCGGGCGGGGTCTATGCC +
Preference number: 5 (lower is better)
Translates to: TACRPLRTGFHTSRP*RRERVRVCPGGVYA
Trigger: GGCATAGACCCCGCCCGGACAAACCCTGACACGTTCCCTCCTTCAGGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000283309.10
CDS GCA 90 bp AGGCCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCAGTAGCCTTCACCCCCACGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RPKNCASLMLATLHT*WKSSRPVAFTPTAS
Trigger: GCTGGCCGTGGGGGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS GCA 90 bp CCCTGGTACCTAGTTCCTGTCTTGTTATACCCACAGCTGTGTCCCTaGAGGGCCAGCACGGCACAGGCCCACACTCTTCCTGGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: PWYLVPVLLYPQLCP*RASTAQAHTLPGAG
Trigger: CCCCGCTCCAGGAAGAGTGTGGGCCTGTGCCGTGCTGGCCCTGCAGGGACACAGCTGTGGGTATAACAAGACAGGAACTAGGTACCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 90 bp TGTGGACAGACCTGGCTCCCAGAGCTCACCGCCCAGCACGGGGCTTaGCCATGGCTGGTATTCATTAATCACAGGCCAGGTGGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: CGQTWLPELTAQHGA*PWLVFINHRPGGGS
Trigger: CGAGCCTCCACCTGGCCTGTGATTAATGAATACCAGCCATGGCCAAGCCCCGTGCTGGGCGGTGAGCTCTGGGAGCCAGGTCTGTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 90 bp CGAGGAAGAGGAGACCACCGCCCAGATCTCCTCATGGCTGAGCCCTaGAGTCCTCCTCGGCCCAACTCTCTCTTCTTCTGGACGGCTGGT +
Preference number: 5 (lower is better)
Translates to: RGRGDHRPDLLMAEP*SPPRPNSLFFWTAG
Trigger: ACCAGCCGTCCAGAAGAAGAGAGAGTTGGGCCGAGGAGGACTCCAGGGCTCAGCCATGAGGAGATCTGGGCGGTGGTCTCCTCTTCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511714.2
ENST00000646385.1
CDS-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: CSGHRAERLWPLSALGWARHVAH*LEKLAA
Trigger: GGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTCCGCTGCCGCAGCTGTaGCAGAGTGGGCCGCACGCG +
Preference number: 5 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLPLPQL*QSGPHA
Trigger: CGCGTGCGGCCCACTCTGCAACAGCTGCGGCAGCGG...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGCTCCTGACGAGTGGCTaGGCTGTCACCACGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LAPQEGPLSGRPSACKQELLTSG*AVTTCA
Trigger: AGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAG...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GAACAGGTCCAGGGCGAGACAGTTGCTGGACCTCTTGCTGGGGAGAGTGGCCCTCTCCTGACGAGTGGCTaGGCTGTCACCACGTGTGCT +
Preference number: 5 (lower is better)
Translates to: EQVQGETVAGPLAGESGPLLTSG*AVTTCA
Trigger: AGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAG...AGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGACCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCCAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGTCCAGGGCGAGACAGTaGCTGGACCTCTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PETLRERAPGCMADRHEVSRARQ*LDLLLG
Trigger: CCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGA...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCTCCAGGGCGAGACAGTaGCTGGACCTCTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: CSGHRAERLWPLSALGWASRARQ*LDLLLG
Trigger: CCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGA...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGCAGCCCTGCACCAGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: PPGWTRQRGGLNARSPAPACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...TGGTGCAGGGCTGCGTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SQTLNWLPETLRERAPGCVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCGTGACAGAGCTGGGCTaGCACCACAAGAGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: CSGHRAERLWPLSALGWAVTELG*HHKRGL
Trigger: GAGGCCCCTCTTGTGGTGCAAGCCCAGCTCTGTCAC...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATGCACAGCGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: RGRTTRGAHRIRAGAMHSGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...GCTGTGCATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: RKERVPLDGPVKEAASMHGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCGGCAGCACTGGGGCTaGTGGCCATCTACAGAACGC +
Preference number: 5 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGRQHWG*WPSTER
Trigger: GCGTTCTGTAGATGGCCACAAGCCCCAGTGCTGCCG...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGGAATTGTGGGCAGTCTaGCCCTCGGCAGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: PLSGRPSACKQELQRGVQELWAV*PSAALG
Trigger: CCCCAGTGCTGCCGAGGGCAAGACTGCCCACAATTC...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTACGCGGGCCCAGGGTAAGACAGGGATaGGGGACTTTACCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: SQQTEPSVCPVQPPLRGPRVRQG*GTLPCA
Trigger: GGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCT...GGGCCCGCGTAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS TCA 90 bp CATCGCGCCCCTCTGAATGTCTTGTCTTCTCGACTGGCCTGTTCGTaGTGGAAGAGGCTGGCCTGCCACGTTCGTGATGTCAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: HRAPLNVLSSRLACS*WKRLACHVRDVRAG
Trigger: CCCGGCCCTGACATCACGAACGTGGCAGGCCAGCCTCTTCCATCACGAACAGGCCAGTCGAGAAGACAAGACATTCAGAGGGGCGCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS GCA 90 bp GGCGGGCACACCTGCTTGCAGCCTCAGGGCTCACCACAGTCCCCCTaGGGACAGCCCCTCTGGACGGAGCAGTTCATTTCTTTCTTTCTT +
Preference number: 5 (lower is better)
Translates to: GGHTCLQPQGSPQSP*GQPLWTEQFISFFL
Trigger: AAGAAAGAAAGAAATGAACTGCTCCGTCCAGAGGGGCTGTCCGCAGGGGGACTGTGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS CCA 90 bp CAGCCCTTAGCCCAGCGACCTCCAGAAGCCTCGCCCACCCCCGGATaGTATACCCACCCTAGAGAGTACGAGTCCTGGCATTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QPLAQRPPEASPTPG*YTHPREYESWHLRK
Trigger: CTTCCTCAAATGCCAGGACTCGTACTCTCTAGGGTGGGTATACCATCCGGGGGTGGGCGAGGCTTCTGGAGGTCGCTGGGCTAAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS-3UTR CAA 90 bp GACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACCCGTCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: DPTLVAFQSPQNRGRTTRLMLAT*HTCWKS
Trigger: GCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAG...ACGGGTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TTGGGGCTCAGGCCCTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGGATGCCTTCCTTCTTATCCTaGTGCAGCCTGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LGLRPWRSRCRVGMCRRMPSFLS*CSLKKC
Trigger: GCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGG...CATCCTCCGGCACATGCCTACCCTGCACCGTGAGCGCCAGGGCCTGAGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp GTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTCCGAACAGGTCCAGGGCTCCTGACGAGTGGCTaGGCTGTCACCACGTGTGCT +
Preference number: 5 (lower is better)
Translates to: VVPTPQTPVVEPLRTGPGLLTSG*AVTTCA
Trigger: AGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAG...CCCTGGACCTGTTCGGAGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp GATGATCCACTGTGGGAAGTAGGAGTGTGGCTCGAAGTACCTCCCGGCATGGGCTCCAGGGCGAGACAGTaGCTGGACCTCTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: DDPLWEVGVWLEVPPGMGSRARQ*LDLLLG
Trigger: CCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGA...GCCCATGCCGGGAGGTACTTCGAGCCACACTCCTACTTCCCACAGTGGATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp CTGCACTCGGAGGAAGGCCACGAAGGGGGCTCTGGGTTTCTCATTTCCCTGCTTTCCAGGGCGAGACAGTaGCTGGACCTCTTGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LHSEEGHEGGSGFLISLLSRARQ*LDLLLG
Trigger: CCCCAGCAAGAGGTCCAGCAACTGTCTCGCCCTGGA...AAGCAGGGAAATGAGAAACCCAGAGCCCCCTTCGTGGCCTTCCTCCGAGTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509157.5
CDS-3UTR CAA 90 bp GGGAGACCCTACCCTGGTGGCCTTCCAGAGCCCACAGAACCGAGGTCGCACTACAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: GRPYPGGLPEPTEPRSHYRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...GTAGTGCGACCTCGGTTCTGTGGGCTCTGGAAGGCCACCAGGGTAGGGTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGCTTCAACACAGGCAAGAGGGAACCGGCCACACCCTGCCCAGGGCCACCCTGTAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: CFNTGKREPATPCPGPPCRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...ACAGGGTGGCCCTGGGCAGGGTGTGGCCGGTTCCCTCTTGCCTGTGTTGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CGGTACTGCTGGGTGGGTGGTGCCTACACCACAAACTCCTGTGGTGGAGCCTCTACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RYCWVGGAYTTNSCGGASTVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...AGAGGCTCCACCACAGGAGTTTGTGGTGTAGGCACCACCCACCCAGCAGTACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp AGAAAGGAGAGGGTCCCCCTGGATGGACCCGTCAAAGAGGCGGCCTCAATGCACACTGTGAACTCCGGCTaGGGAGCTCTGGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RKERVPLDGPVKEAASMHTVNSG*GALAAC
Trigger: ACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGT...GTGCATTGAGGCCGCCTCTTTGACGGGTCCATCCAGGGGGACCCTCTCCTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCTGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: CSGHRAERLWPLSALGWAWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGTGGCAGGCCCAGCGCTaGCAAACAGGAGTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: PETLRERAPGCMADRHEVWQAQR*QTGVAE
Trigger: CTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCA...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: SPVSWRVVWRGLHHTQTVGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...CACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCGCTTGGCATCTTCCTTaGATGCATTTCAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAAWHLP*MHFRRP
Trigger: GGGCCTCCTGAAATGCATCAAAGGAAGATGCCAAGC...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp GGAGCCCCCTCCCAGGATGGCCTTCTGCTTCCAGCTCCGCTCCTGCCCCTCCAGCATGGGACTGGGCTCTaGCTTCCAAGTTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: GAPSQDGLLLPAPLLPLQHGTGL*LPSFFK
Trigger: TTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCATG...CTGGAGGGGCAGGAGCGGAGCTGGAAGCAGAAGGCCATCCTGGGAGGGGGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCCGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: AWADSRCSPRSACSAQAAVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...GGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CAA 90 bp CTGTGTCTCCCCAACACTGGTGTGTACCTTCCCTCATGGTCCATGGGACTGGGCCTCCTGACGAGTGGCTaGGCTGTCACCACGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LCLPNTGVYLPSWSMGLGLLTSG*AVTTCA
Trigger: AGCACACGTGGTGACAGCCAAGCCACTCGTCAGGAG...GCCCAGTCCCATGGACCATGAGGGAAGGTACACACCAGTGTTGGGGAGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: VPCTASPPLSVCHQSFAPLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...AGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTTGCACCACAAGAGGGGCCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: LAPQEGPLSGRPSACKQEACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...CTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGGCCCCTCTTGTGGTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGCACAGGGCTGAACGATaGTGGCCTCTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWHRAER*WPLSAL
Trigger: CAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTG...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCGGGACGTGCAAAAAGAAAGGTaGGCTTCCCCGACTTCCCGC +
Preference number: 5 (lower is better)
Translates to: TLRERAPGCMADRHEVRDVQKER*ASPTSR
Trigger: GCGGGAAGTCGGGGAAGCCAACCTTTCTTTTTGCAC...GTCCCGCACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: PETLRERAPGCMADRHEVLMLAT*HTCWKS
Trigger: GCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAG...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGCCTTCCTTCTTATCCTaGTGCAGCCTGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGPSFLS*CSLKKC
Trigger: GCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGG...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GACGTGGTCTACAGCGTTCAAGAACATCTGCAAAGGCGGGCTTCGGGCGGGCACAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: DVVYSVQEHLQRRASGGHRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...GTGCCCGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAACGCTGTAGACCACGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp AGCCAGACCTTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: SQTLNWLPETLRERAPGCACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...ACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAAGGTCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACAGGCATGAGGTGGCTTGCAAACAGGAGTaGCAGAGAGGGGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: PETLRERAPGCMADRHEVACKQE*QRGVQV
Trigger: GACCTGAACCCCTCTCTGCAACTCCTGTTTGCAAGC...CACCTCATGCCTGTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGTAGGCTTCCTCCCGGTGAGCGCACTGTGACCTCAGCACGCGCTCCTTCAAGTGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SRLPPGERTVTSARAPSSGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...ACTTGAAGGAGCGCGTGCTGAGGTCACAGTGCGCTCACCGGGAGGAAGCCTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp AGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SSGSLCPSGLSLGELTVWGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...CCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTGATGTCAGAGCCAGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: TGMRCGTCLLPPRLMSEPGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...TGGCTCTGACATCAACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACCACAGGGCTGAACGATaGTGGCCTCTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: LNWLPETLRERAPGCMADHRAER*WPLSAL
Trigger: CAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTG...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CAGCCCAACCCCAGCCAGGGCAATGGCTTAAGGAAGCCACCTGTGAGCAGAGTGGCCCCTCTGAATGTCTaGTCTTCTCGACTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: QPNPSQGNGLRKPPVSRVAPLNV*SSRLAC
Trigger: ACAGGCCAGTCGAGAAGACAAGACATTCAGAGGGGC...CACTCTGCTCACAGGTGGCTTCCTTAAGCCATTGCCCTGGCTGGGGTTGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000646385.1
CDS-3UTR CAA 90 bp CACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCCGTGCAAAAAGAAAGGTaGGCTTCCCCGACTTCCCGC +
Preference number: 5 (lower is better)
Translates to: HVPGAHTRFPFTERRGSPVQKER*ASPTSR
Trigger: GCGGGAAGTCGGGGAAGCCAACCTTTCTTTTTGCAC...GGGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CAGCTCGCCGCCGTGAGAACGGTCATGGGCCCGGCTGCAGGACCGGCATTGCCTTGGAAAATAGCCGTATaGCCTAAAAGACCTCTGATC +
Preference number: 5 (lower is better)
Translates to: QLAAVRTVMGPAAGPALPWKIAV*PKRPLI
Trigger: GATCAGAGGTCTTTTAGGCAATACGGCTATTTTCCA...AGGCAATGCCGGTCCTGCAGCCGGGCCCATGACCGTTCTCACGGCGGCGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTCTCTCTGGGTCGTTCTaGCGAGTCTGGACCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVLSGSF*RVWTCQ
Trigger: CTGGCAGGTCCAGACTCGCAAGAACGACCCAGAGAG...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AACACCATGGCTCTCTGGACACTTGACAGCCAGACCTTGAACTGGCTCCCTGAGCCCACACCTCCCAGGTaGGGAGTACATGTCCGCCTC +
Preference number: 5 (lower is better)
Translates to: NTMALWTLDSQTLNWLPEPTPPR*GVHVRL
Trigger: GAGGCGGACATGTACTCCCAACCTGGGAGGTGTGGG...CTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAGTGTCCAGAGAGCCATGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGGCTGCAGGACCGGCATaGCCTACCACGTCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLAAGPA*PTTSSL
Trigger: GAGGCTGGACGTGGTAGGCAATGCCGGTCCTGCAGC...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCAGGGCTGCCCCGGATTaGTTTTCTAACCTTGGCACC +
Preference number: 5 (lower is better)
Translates to: CSGHRAERLWPLSALGWARAAPD*FSNLGT
Trigger: GGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCT...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS GCA 90 bp AGGCCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCAGTAGCCTTCACATCATCCATCGCC +
Preference number: 5 (lower is better)
Translates to: RPKNCASLMLATLHT*WKSSRPVAFTSSIA
Trigger: GGCGATGGATGATGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS-3UTR CAA 90 bp TCTCTGCTGCTTTCTGTCTGGGAAGGAGCCCCCTCCCAGGATGGCCTTCTGCTTCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SLLLSVWEGAPSQDGLLLLMLAT*HTCWKS
Trigger: GCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAG...AAGCAGAAGGCCATCCTGGGAGGGGGCTCCTTCCCAGACAGAAAGCAGCAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCATCCTTCCTTCTTATCCTaGTGCAGCCTGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TEPRSHYPWSPPDQSRCHPSFLS*CSLKKC
Trigger: GCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGG...ATGGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: CSGHRAERLWPLSALGWALLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTGGGAAAGCACAGCCATaGACTGTGGATGGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSGKAQP*TVDGGG
Trigger: TCCTCCACCATCCACAGTCAATGGCTGTGCTTTCCC...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CAGGTGCCGTGCCCTGTGGTCGCTTATGACCCTTCCGTTTTCCACGTAGTGCTGTTCTCATTTCCCTGCTaGCAGCCTCAGGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: QVPCPVVAYDPSVFHVVLFSFPC*QPQGSP
Trigger: TGGTGAGCCCTGAGGCTGCAAGCAGGGAAATGAGAA...CAGCACTACGTGGAAAACGGAAGGGTCATAAGCGACCACAGGGCACGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CAA 90 bp CAGTGGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGAAGGGTAAGACAGGGATaGGGGACTTTACCCTGTGCC +
Preference number: 5 (lower is better)
Translates to: QWCSGHRAERLWPLSALGRVRQG*GTLPCA
Trigger: GGCACAGGGTAAAGTCCCCAATCCCTGTCTTACCCT...TCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGCTTCCAAGTTTCTTCAAAGGAAGAAGATAGTCATTGCCCCGGAGCGGGGCAATCTGGACCTGCCAGCTaGACCGCTGACCTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: CFQVSSKEEDSHCPGAGQSGPAS*TADLAR
Trigger: CCGGGCCAGGTCAGCGGTCAAGCTGGCAGGTCCAGA...TTGCCCCGCTCCGGGGCAATGACTATCTTCTTCCTTTGAAGAAACTTGGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CACCTTCTCTCCCAGATTAGGATGGGTGACAGGCTGCCTCAGGGGCCAACACCAAGGGCTGCCCCGGATTaGTTTTCTAACCTTGGCACC +
Preference number: 5 (lower is better)
Translates to: HLLSQIRMGDRLPQGPTPRAAPD*FSNLGT
Trigger: GGTGCCAAGGTTAGAAAACAAATCCGGGGCAGCCCT...TGGTGTTGGCCCCTGAGGCAGCCTGTCACCCATCCTAATCTGGGAGAGAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS GCA 90 bp TACAACTTACCCACTCCTGTCGGGGAAAGCTTCCCACTAGACACCTaGAGAGTGGGCAGTGAACAGCGAGAACCGCCACGCAGCAAGCAT +
Preference number: 5 (lower is better)
Translates to: YNLPTPVGESFPLDT*RVGSEQREPPRSKH
Trigger: ATGCTTGCTGCGTGGCGGTTCTCGCTGTTCACTGCCCACTCTGCAGGTGTCTAGTGGGAAGCTTTCCCCGACAGGAGTGGGTAAGTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 90 bp CCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTAGCCTTCACATCATCCATCGCCCAA +
Preference number: 5 (lower is better)
Translates to: PKNCASLMLATLHTC*KSSRPVAFTSSIAQ
Trigger: TTGGGCGATGGATGATGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS-3UTR CAA 90 bp AAGTACCTCCCGGCATGGGCCGACTCCCGGTGCTCGCCCAGGTCAGCCTGCAGCGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: KYLPAWADSRCSPRSACSVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...GCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CAA 90 bp CTGCACAGTGATGACTGTGAACTCCGGCTTGGGAGCTCTGGCAGCCTGTGCCCACCTTCCTTCTTATCCTaGTGCAGCCTGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LHSDDCELRLGSSGSLCPPSFLS*CSLKKC
Trigger: GCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGG...TGGGCACAGGCTGCCAGAGCTCCCAAGCCGGAGTTCACAGTCATCACTGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCTCTGTCTGGCAGGCCCAGCGCTTGCAAACAGGAGTTGCAGAGAGGGGTTCAGCCTTCCTTCTTATCCTaGTGCAGCCTGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PLSGRPSACKQELQRGVQPSFLS*CSLKKC
Trigger: GCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGG...CTGAACCCCTCTCTGCAACTCCTGTTTGCAAGCGCTGGGCCTGCCAGACAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTTGGGAGCTCTGGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACACCTTCCTTCTTATCCTaGTGCAGCCTGAAGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LGSSGSLCPSGLSLGELTPSFLS*CSLKKC
Trigger: GCACTTCTTCAGGCTGCACAAGGATAAGAAGGAAGG...TGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCCAGAGCTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTAGCTCTGGAAGCACCTCAGTGGTCAAGAACGGCCTCCTATTTTATACGGGAGCAGTTGCTGGACCTCTaGCTGGGGAGAGTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LALEAPQWSRTASYFIREQLLDL*LGRVAL
Trigger: CAGGGCCACTCTCCCCAGCAAGAGGTCCAGCAACTG...CTCCCGTATAAAATAGGAGGCCGTTCTTGACCACTGAGGTGCTTCCAGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS-3UTR CAA 90 bp GTCTCCAGTGAGCTGGAGGGTGGTGTGGCGTGGTCTTCACCACACACAGACAGTTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: VSSELEGGVAWSSPHTDSLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...ACTGTCTGTGTGTGGTGAAGACCACGCCACACCACCCTCCAGCTCACTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ACACGTGCCTGGGGCACACACACGATTCCCTTTCACAGAAAGGAGAGGGTCCCCTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: TRAWGTHTIPFHRKERVPLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...GGGGACCCTCTCCTTTCTGTGAAAGGGAATCGTGTGTGTGCCCCAGGCACGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TCCAAGGGCACGTCCACAGACATCTCTCTGGATTCCCTGAGCCAGGAGTTGGCCTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SKGTSTDISLDSLSQELALLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...GGCCAACTCCTGGCTCAGGGAATCCAGAGAGATGTCTGTGGACGTGCCCTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp GGCAGCCTGTGCCCATCAGGACTGTCTCTTGGGGAGCTGACAGTGTGGGAAACTTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GSLCPSGLSLGELTVWETLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...AGTTTCCCACACTGTCAGCTCCCCAAGAGACAGTCCTGATGGGCACAGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGGTGTATGGCAGACAGGCATGAGGTGCGGGACCTGTTTGTTACCTCCCAGGTTAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: GCMADRHEVRDLFVTSQVRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...AACCTGGGAGGTAACAAACAGGTCCCGCACCTCATGCCTGTCTGCCATACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCLDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TCTCATGGAGCCCGTGGACCTCCAAGGGCACGTCCACAGACATCTCTCTGGATTGCCCCTCTGAATGTCTaGTCTTCTCGACTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SHGARGPPRARPQTSLWIAPLNV*SSRLAC
Trigger: ACAGGCCAGTCGAGAAGACAAGACATTCAGAGGGGC...AATCCAGAGAGATGTCTGTGGACGTGCCCTTGGAGGTCCACGGGCTCCATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468647.5
ENST00000509157.5
CDS-3UTR CAA 90 bp TTGAACTGGCTCCCTGAGACCCTGAGGGAAAGAGCTCCCGGGTGTATGGCAGACCTAATGGGAATGGCTTaGGGAAGTGCCCACATGCTC +
Preference number: 5 (lower is better)
Translates to: LNWLPETLRERAPGCMADLMGMA*GSAHML
Trigger: GAGCATGTGGGCACTTCCCAAAGCCATTCCCATTAG...GTCTGCCATACACCCGGGAGCTCTTTCCCTCAGGGTCTCAGGGAGCCAGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS GCA 90 bp AGCTCTAAGGCAGCTCTGGAAGAAGCAGCCCCCGTTGGTTTAGAGTaGAGCCCACCAGATGTACAACTTACCCACTCCTGTCGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: SSKAALEEAAPVGLE*SPPDVQLTHSCRGK
Trigger: CTTTCCCCGACAGGAGTGGGTAAGTTGTACATCTGGTGGGCTGCACTCTAAACCAACGGGGGCTGCTTCTTCCAGAGCTGCCTTAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 90 bp ACTGACACAGGCACAGGACTAAACATCCCACTGCAAGGGAGAAGCTaGATGCAAAAGGCCGGGCTCCATTCCGAGACATCCAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: TDTGTGLNIPLQGRS*MQKAGLHSETSSKG
Trigger: GCCTTTGCTGGATGTCTCGGAATGGAGCCCGGCCTTTTGCATCCAGCTTCTCCCTTGCAGTGGGATGTTTAGTCCTGTGCCTGTGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS-3UTR CAA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCC +
Preference number: 5 (lower is better)
Translates to: FVTSQVDVRASSTPLTGERHVAH*LEKLAA
Trigger: GGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCG...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGTGGAGCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SQVDVRASSTPLTGEPVELMLAT*HTCWKS
Trigger: GCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAG...CTCCACAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GTCCCCCACTCTCCGTCTGTCACCAAAGCTTCGCCCCTCCGCCAGCTGGGCTGCGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: VPHSPSVTKASPLRQLGCVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...GCAGCCCAGCTGGCGGAGGGGCGAAGCTTTGGTGACAGACGGAGAGTGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAAGGGGCAGTGGGGTCTTaGGAAGCCCTGGCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEGAVGS*EALAWK
Trigger: CTTCCAAGCCAGGGCTTCCAAAGACCCCACTGCCCC...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACACACAGGGCTGAACGATaGTGGCCTCTCAGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITHRAER*WPLSAL
Trigger: CAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTG...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGCCCATGGGACTGGGCTCTaGCTTCCAAGTTTCTTCAAA +
Preference number: 5 (lower is better)
Translates to: CSGHRAERLWPLSALGWAHGTGL*LPSFFK
Trigger: TTTGAAGAAACTTGGAAGCAAGAGCCCAGTCCCATG...GGCCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TTTGTTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAAGGGCTGATGCTCGGCTaGGGAACCACCTCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: FVTSQVDVRASSTPLTGEGLMLG*GTTSPV
Trigger: CACAGGAGAGGTGGTTCCCAAGCCGAGCATCAGCCC...TTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CCACAGAACCGAGGTCGCACTACCCGTGGAGCCCACCGGATCAGAGCAGGTGCCGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: PQNRGRTTRGAHRIRAGAVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...GGCACCTGCTCTGATCCGGTGGGCTCCACGGGTAGTGCGACCTCGGTTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp ATGTGTGCATGTAGGTCTTGGCTCAGACCCTGCTTCATGGTGGACACCACCTGCTTGTTACCTCCCAGGTaGATGTCAGAGCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: MCACRSWLRPCFMVDTTCLLPPR*MSEPAP
Trigger: TGGAGCTGGCTCTGACATCAACCTGGGAGGTAACAA...GCAGGTGGTGTCCACCATGAAGCAGGGTCTGAGCCAAGACCTACATGCACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp AGGCAGGCTGGTCCTGGTTCAAGCAGGAGGCATCTGCTCGGGTTCTTTATTACAAGGTGCGGGACCTGTTaGTTACCTCCCAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: RQAGPGSSRRHLLGFFITRCGTC*LPPRLM
Trigger: CATCAACCTGGGAGGTAACAAACAGGTCCCGCACCT...TGTAATAAAGAACCCGAGCAGATGCCTCCTGCTTGAACCAGGACCAGCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000283309.10
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp TTACCTCCCAGGTTGATGTCAGAGCCAGCTCCACACCTCTTACAGGTGAACCTGGCCCCTCTGAATGTCTaGTCTTCTCGACTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: LPPRLMSEPAPHLLQVNLAPLNV*SSRLAC
Trigger: ACAGGCCAGTCGAGAAGACAAGACATTCAGAGGGGC...CAGGTTCACCTGTAAGAGGTGTGGAGCTGGCTCTGACATCAACCTGGGAGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000646385.1
CDS TCA 90 bp AGTATTCCAGGAAACACCCCTTACAGTCCGCATGCCGTTACCTTATaGCCCTTCCGTTTTCCACGTAGTGCTGCACTCGGAGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SIPGNTPYSPHAVTL*PFRFPRSAALGGRP
Trigger: TGGCCTTCCTCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATAAGGTAACGGCATGCGGACTGTAAGGGGTGTTTCCTGGAATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 90 bp GGCTGGTATTCATTAATCACAGGCCAGGTGGAGGCTCGCCCAAGATaGAGGTGCAAGATCTTCTCATATAATTCCCCCGAACTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GWYSLITGQVEARPR*RCKIFSYNSPELAP
Trigger: TGGGGCCAGTTCGGGGGAATTATATGAGAAGATCTTGCACCTGCATCTTGGGCGAGCCTCCACCTGGCCTGTGATTAATGAATACCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS-3UTR CAA 90 bp AAGTGCAGGCAGCATCTGGCGGGCAGGAAGGGACGAGGGCCATGTGGAAGTGGGGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: KCRQHLAGRKGRGPCGSGVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...CCCACTTCCACATGGCCCTCGTCCCTTCCTGCCCGCCAGATGCTGCCTGCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000336070.11
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GCATCTGCTCGGGTTCTTTATTACACGTGCCTGGGGCACACACACGATTCCCTTCTAATGGGAATGGCTTaGGGAAGTGCCCACATGCTC +
Preference number: 5 (lower is better)
Translates to: ASARVLYYTCLGHTHDSLLMGMA*GSAHML
Trigger: GAGCATGTGGGCACTTCCCAAAGCCATTCCCATTAG...AAGGGAATCGTGTGTGTGCCCCAGGCACGTGTAATAAAGAACCCGAGCAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CTGGCGCTCACGGTGCAGGGTAGGCATGTGCCGGAGGATGTAGTCAATCCCCCTGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: LALTVQGRHVPEDVVNPPVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...AGGGGGATTGACTACATCCTCCGGCACATGCCTACCCTGCACCGTGAGCGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000468647.5
ENST00000506415.1
ENST00000509157.5
CDS-3UTR CAA 90 bp CCGGATCAGAGCAGGTGCCATGCACAGCTAGTCCCCCACTCTCCGTCTGTCACCGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: PDQSRCHAQLVPHSPSVTVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...GGTGACAGACGGAGAGTGGGGGACTAGCTGTGCATGGCACCTGCTCTGATCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp CGAAACGTCTCCCAGCAGACCGAGCCAAGTGTGTGTCCAGTTCAGCCTCCCCTATGGAAAATAGCCGTATaGCCTAAAAGACCTCTGATC +
Preference number: 5 (lower is better)
Translates to: RNVSQQTEPSVCPVQPPLWKIAV*PKRPLI
Trigger: GATCAGAGGTCTTTTAGGCAATACGGCTATTTTCCA...TAGGGGAGGCTGAACTGGACACACACTTGGCTCGGTCTGCTGGGAGACGTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GGTGTTCAGGGCACAGGGCTGAACGATTGTGGCCTCTCAGTGCTCTGGGATGGGGTACTTGCTGAGCTTTaGCTCCAAATCCATAAATAT +
Preference number: 5 (lower is better)
Translates to: GVQGTGLNDCGLSVLWDGVLAEL*LQIHKY
Trigger: ATATTTATGGATTTGGAGCAAAAGCTCAGCAAGTAC...CCCATCCCAGAGCACTGAGAGGCCACAATCGTTCAGCCCTGTGCCCTGAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283309.10
ENST00000440994.6
ENST00000468647.5
ENST00000644440.1
ENST00000646385.1
CDS-3UTR CAA 90 bp GCAAATCAATCATCTTGTACTAATGGGAATGGCTTTGGGAAGTGCCCACATGCTCTTGACAGCCAGACCTaGAACTGGCTCCCTGAGACC +
Preference number: 5 (lower is better)
Translates to: ANQSSCTNGNGFGKCPHALDSQT*NWLPET
Trigger: GGTCTCAGGGAGCCAGTTCAAGGTCTGGCTGTCAAG...AGCATGTGGGCACTTCCCAAAGCCATTCCCATTAGTACAAGATGATTGATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644440.1
ENST00000646385.1
CDS GCA 90 bp ATAAATATATACTCATTGTTTCTGACCACACAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCCACGTTGCACACTTGCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: INIYSLFLTTQRPKN*ASLMLATLHTCWKS
Trigger: GCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTATATATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CCA 72 bp GGTCCGGCTCGTCGTCCGGCTCAAGGCTCCGGGCCGTaGTCCCGCCGGCGGTGTAGAAGCGGCCGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: GPARRPAQGSGP*SRRRCRSGRRS
Trigger: AGAGCGGCGGCCGCTTCTACACCGCCGGCGGGACCACGGCCCGGAGCCTTGAGCCGGACGACGAGCCGGACC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644440.1
CDS GCA 72 bp CGGCCAGTAGCCTTCACCCCCACGGCCAGCCGCAGTTaGTCCCGGCTGGGCAGCAGCACGAGGACATCCCTG +
Preference number: 6 (lower is better)
Translates to: RPVAFTPTASRS*SRLGSSTRTSL
Trigger: CAGGGATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTGGGGGTGAAGGCTACTGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS GCA 72 bp CTTGGTGATGATCTCCCGGCATGGGCCGACTCCCGGTaGTCGCCCAGGTCAGCCTGCAGCGCGCAGGCAGCC +
Preference number: 6 (lower is better)
Translates to: LGDDLPAWADSR*SPRSACSAQAA
Trigger: GGCTGCCTGCGCGCTGCAGGCTGACCTGGGCGAGCACCGGGAGTCGGCCCATGCCGGGAGATCATCACCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CAA 72 bp GCGGCCAGTAGCCTTCACCCCCACGGCCAGCCGCAGTaGCTCCCGGCTGGGCAGCAGCACGAGGACATCCCT +
Preference number: 6 (lower is better)
Translates to: AASSLHPHGQPQ*LPAGQQHEDIP
Trigger: AGGGATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTGGGGGTGAAGGCTACTGGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CCA 72 bp CCTTCACCCCCACGGCCAGCCGCAGTTGCTCCCGGCTaGGCAGCAGCACGAGGACATCCCTGTGTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: PSPPRPAAVAPG*AAARGHPCVPR
Trigger: CCTCGGAACACAGGGATGTCCTCGTGCTGCTGCCCAGCCGGGAGCAACTGCGGCTGGCCGTGGGGGTGAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS GCA 72 bp ATCTGCAAAGGCGGGCTTCGGGCGGGCACACCTGCTTaGAGCCTCAGGGCTCACCACAGTCCCCCTGCGGAC +
Preference number: 6 (lower is better)
Translates to: ICKGGLRAGTPA*SLRAHHSPPAD
Trigger: GTCCGCAGGGGGACTGTGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCCCGAAGCCCGCCTTTGCAGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS CAA 72 bp CATCTGCAAAGGCGGGCTTCGGGCGGGCACACCTGCTaGCAGCCTCAGGGCTCACCACAGTCCCCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: HLQRRASGGHTC*QPQGSPQSPCG
Trigger: TCCGCAGGGGGACTGTGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCCCGAAGCCCGCCTTTGCAGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS GCA 72 bp GAACATCTGCAAAGGCGGGCTTCGGGCGGGCACACCTaGTTGCAGCCTCAGGGCTCACCACAGTCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: EHLQRRASGGHT*LQPQGSPQSPC
Trigger: GCAGGGGGACTGTGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCCCGAAGCCCGCCTTTGCAGATGTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS CCA 72 bp CTGCAGGGCCAGCACGGCACAGGCCCACACTCTTCCTaGAGCGGGGCACAGGTGACTTGCTGCCACCAAGGA +
Preference number: 6 (lower is better)
Translates to: LQGQHGTGPHSS*SGAQVTCCHQG
Trigger: TCCTTGGTGGCAGCAAGTCACCTGTGCCCCGCTCCAGGAAGAGTGTGGGCCTGTGCCGTGCTGGCCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CAA 90 bp GTTCAAGAACATCTGCAAAGGCGGGCTTCGGGCGGGCACACCTGCTaGCAGCCTCAGGGCTCACCACAGTCCCCCTGCGGACAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: VQEHLQRRASGGHTC*QPQGSPQSPCGQPL
Trigger: GAGGGGCTGTCCGCAGGGGGACTGTGGTGAGCCCTGAGGCTGCAAGCAGGTGTGCCCGCCCGAAGCCCGCCTTTGCAGATGTTCTTGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468647.5
CDS CCA 72 bp GTAGTACAGGTGCCGTGCCCTGTGGTCGCTGGAAGGTaGCAGGGAGTGAGTTCCAGGACGACCGGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: VVQVPCPVVAGR*QGVSSRTTGVG
Trigger: CCCCACACCGGTCGTCCTGGAACTCACTCCCTGCCACCTTCCAGCGACCACAGGGCACGGCACCTGTACTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 72 bp CTGGCAGCAGGGACTGCAGAGGGGCGAGGTGTCCTCTaGGGGTGGTCGGATGGCAGTGATGGCTGCACAGTT +
Preference number: 6 (lower is better)
Translates to: LAAGTAEGRGVL*GWSDGSDGCTV
Trigger: AACTGTGCAGCCATCACTGCCATCCGACCACCCCCAGAGGACACCTCGCCCCTCTGCAGTCCCTGCTGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS TCA 72 bp AGGCCTCTCAGGACTGGGTTCCATACATCGCGCCCCTaGAGGAGGGAACGTGTCAGGGTTTGTCCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: RPLRTGFHTSRP*RRERVRVCPGG
Trigger: CCCGCCCGGACAAACCCTGACACGTTCCCTCCTTCAGGGGCGCGATGTATGGAACCCAGTCCTGAGAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000283309.10
CDS GCA 72 bp CGCGTCCATTCCCAGGGTCGGCTCCTGCTGACTGCATaGAGGCCTCTCAGGACTGGGTTCCATACATCGCGC +
Preference number: 6 (lower is better)
Translates to: RVHSQGRLLLTA*RPLRTGFHTSR
Trigger: GCGCGATGTATGGAACCCAGTCCTGAGAGGCCTGCATGCAGTCAGCAGGAGCCGACCCTGGGAATGGACGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS GCA 72 bp TGGCCTTCACCAAACCAAGCCCCAGTGCAGGAGAGGTaGACAGAGCCCGGGCGACTCGAATCCCTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: WPSPNQAPVQER*TEPGRLESLEV
Trigger: CACCTCCAGGGATTCGAGTCGCCCGGGCTCTGTGCACCTCTCCTGCACTGGGGCTTGGTTTGGTGAAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 72 bp GCCCAGCGACCTCCAGAAGCCTCGCCCACCCCCGGATaGTATACCCACCCTAGAGAGTACGAGTCCTGGCAT +
Preference number: 6 (lower is better)
Translates to: AQRPPEASPTPG*YTHPREYESWH
Trigger: ATGCCAGGACTCGTACTCTCTAGGGTGGGTATACCATCCGGGGGTGGGCGAGGCTTCTGGAGGTCGCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CAA 90 bp GAGGCCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCCAGTAGCCTTCACCCCCACGGCCAG +
Preference number: 6 (lower is better)
Translates to: EAKELRVSDARHVAH*LEKLAASSLHPHGQ
Trigger: CTGGCCGTGGGGGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CAA 90 bp CCAGCTCCCAGGGCTGTCCTGAGCCCCTGGTACCTAGTTCCTGTCTaGTTATACCCACAGCTGTGTCCCTGCAGGGCCAGCACGGCACAG +
Preference number: 6 (lower is better)
Translates to: PAPRAVLSPWYLVPV*LYPQLCPCRASTAQ
Trigger: CTGTGCCGTGCTGGCCCTGCAGGGACACAGCTGTGGGTATAACAAGACAGGAACTAGGTACCAGGGGCTCAGGACAGCCCTGGGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 72 bp CCCACTCCTGTCGGGGAAAGCTTCCCACTAGACACCTaGAGAGTGGGCAGTGAACAGCGAGAACCGCCACGC +
Preference number: 6 (lower is better)
Translates to: PTPVGESFPLDT*RVGSEQREPPR
Trigger: GCGTGGCGGTTCTCGCTGTTCACTGCCCACTCTGCAGGTGTCTAGTGGGAAGCTTTCCCCGACAGGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 72 bp CACGCGCTCCTTCAAGTGGCAGTAGTACAGGTGCCGTaGCCTGTGGTCGCTGGAAGGTGGCAGGGAGTGAGT +
Preference number: 6 (lower is better)
Translates to: HALLQVAVVQVP*PVVAGRWQGVS
Trigger: ACTCACTCCCTGCCACCTTCCAGCGACCACAGGGCACGGCACCTGTACTACTGCCACTTGAAGGAGCGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 72 bp TGCGCGTCTCTGATGCTCGCCACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTAGCCTTCACCCCCACG +
Preference number: 6 (lower is better)
Translates to: CASLMLATLHTC*KSSRPVAFTPT
Trigger: CGTGGGGGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CCA 72 bp CAGAGCTCACCGCCCAGCACGGGGCTTGGCCATGGCTaGTATTCATTAATCACAGGCCAGGTGGAGGCTCGC +
Preference number: 6 (lower is better)
Translates to: QSSPPSTGLGHG*YSLITGQVEAR
Trigger: GCGAGCCTCCACCTGGCCTGTGATTAATGAATACCAGCCATGGCCAAGCCCCGTGCTGGGCGGTGAGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS TCA 72 bp AGGAAGAGGAGACCACCGCCCAGATCTCCTCATGGCTaGGCCCTGGAGTCCTCCTCGGCCCAACTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: RKRRPPPRSPHG*ALESSSAQLSL
Trigger: AAGAGAGAGTTGGGCCGAGGAGGACTCCAGGGCTCAGCCATGAGGAGATCTGGGCGGTGGTCTCCTCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS GCA 72 bp AACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCAGTAGCCTTCACCCCC +
Preference number: 6 (lower is better)
Translates to: NCASLMLATLHT*WKSSRPVAFTP
Trigger: GGGGGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CCA 72 bp ACCTGGCTCCCAGAGCTCACCGCCCAGCACGGGGCTTaGCCATGGCTGGTATTCATTAATCACAGGCCAGGT +
Preference number: 6 (lower is better)
Translates to: TWLPELTAQHGA*PWLVFINHRPG
Trigger: ACCTGGCCTGTGATTAATGAATACCAGCCATGGCCAAGCCCCGTGCTGGGCGGTGAGCTCTGGGAGCCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 72 bp TGTCTTCTCGACTGGCCTGTTCGTGATGGAAGAGGCTaGCCTGCCACGTTCGTGATGTCAGGGCCGGGCAGT +
Preference number: 6 (lower is better)
Translates to: CLLDWPVRDGRG*PATFVMSGPGS
Trigger: ACTGCCCGGCCCTGACATCACGAACGTGGCAGGCCAGCCTCTTCCATCACGAACAGGCCAGTCGAGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS CAA 72 bp GAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCCAGTAGCCTTCACCCC +
Preference number: 6 (lower is better)
Translates to: ELRVSDARHVAH*LEKLAASSLHP
Trigger: GGGGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CAA 90 bp ACCACACAGAGGCCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGCTCGCGGCCAGTAGCCTTCACCCCC +
Preference number: 6 (lower is better)
Translates to: TTQRPKNCASLMLAT*HTCWKSSRPVAFTP
Trigger: GGGGGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTGTGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CAA 72 bp AGGCCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGCTCGCGGCCAGTAGCC +
Preference number: 6 (lower is better)
Translates to: RPKNCASLMLAT*HTCWKSSRPVA
Trigger: GGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CAA 72 bp AGGGCTGTCCTGAGCCCCTGGTACCTAGTTCCTGTCTaGTTATACCCACAGCTGTGTCCCTGCAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: RAVLSPWYLVPV*LYPQLCPCRAS
Trigger: GCTGGCCCTGCAGGGACACAGCTGTGGGTATAACAAGACAGGAACTAGGTACCAGGGGCTCAGGACAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CAA 90 bp GAGGCCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCCAGTAGCCTTCACATCATCCATCGC +
Preference number: 6 (lower is better)
Translates to: EAKELRVSDARHVAH*LEKLAASSLHIIHR
Trigger: GCGATGGATGATGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS GCA 72 bp CTAGTTCCTGTCTTGTTATACCCACAGCTGTGTCCCTaGAGGGCCAGCACGGCACAGGCCCACACTCTTCCT +
Preference number: 6 (lower is better)
Translates to: LVPVLLYPQLCP*RASTAQAHTLP
Trigger: AGGAAGAGTGTGGGCCTGTGCCGTGCTGGCCCTGCAGGGACACAGCTGTGGGTATAACAAGACAGGAACTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 72 bp TGCGCGTCTCTGATGCTCGCCACGTTGCACACTTGCTaGAAAAGCTCGCGGCCAGTAGCCTTCACATCATCC +
Preference number: 6 (lower is better)
Translates to: CASLMLATLHTC*KSSRPVAFTSS
Trigger: GGATGATGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS CAA 72 bp GAACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTaGCTGGAAAAGCTCGCGGCCAGTAGCCTTCACATC +
Preference number: 6 (lower is better)
Translates to: ELRVSDARHVAH*LEKLAASSLHI
Trigger: GATGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS CAA 90 bp ACCACACAGAGGCCAAAGAACTGCGCGTCTCTGATGCTCGCCACGTaGCACACTTGCTGGAAAAGCTCGCGGCCAGTAGCCTTCACATCA +
Preference number: 6 (lower is better)
Translates to: TTQRPKNCASLMLAT*HTCWKSSRPVAFTS
Trigger: TGATGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTGTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS GCA 72 bp AACTGCGCGTCTCTGATGCTCGCCACGTTGCACACTTaGTGGAAAAGCTCGCGGCCAGTAGCCTTCACATCA +
Preference number: 6 (lower is better)
Translates to: NCASLMLATLHT*WKSSRPVAFTS
Trigger: TGATGTGAAGGCTACTGGCCGCGAGCTTTTCCAGCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440994.6
CDS CCA 72 bp CCCGGATGGTATACCCACCCTAGAGAGTACGAGTCCTaGCATTTGAGGAAGTACCACTTTAGGCCGGGCACG +
Preference number: 6 (lower is better)
Translates to: PGWYTHPREYES*HLRKYHFRPGT
Trigger: CGTGCCCGGCCTAAAGTGGTACTTCCTCAAATGCCAGGACTCGTACTCTCTAGGGTGGGTATACCATCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CCA 72 bp GGCACAGGACTAAACATCCCACTGCAAGGGAGAAGCTaGATGCAAAAGGCCGGGCTCCATTCCGAGACATCC +
Preference number: 6 (lower is better)
Translates to: GTGLNIPLQGRS*MQKAGLHSETS
Trigger: GGATGTCTCGGAATGGAGCCCGGCCTTTTGCATCCAGCTTCTCCCTTGCAGTGGGATGTTTAGTCCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646385.1
CDS TCA 72 bp CCTCTGAATGTCTTGTCTTCTCGACTGGCCTGTTCGTaGTGGAAGAGGCTGGCCTGCCACGTTCGTGATGTC +
Preference number: 6 (lower is better)
Translates to: PLNVLSSRLACS*WKRLACHVRDV
Trigger: GACATCACGAACGTGGCAGGCCAGCCTCTTCCATCACGAACAGGCCAGTCGAGAAGACAAGACATTCAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000646385.1
CDS GCA 72 bp GCAGCTCTGGAAGAAGCAGCCCCCGTTGGTTTAGAGTaGAGCCCACCAGATGTACAACTTACCCACTCCTGT +
Preference number: 6 (lower is better)
Translates to: AALEEAAPVGLE*SPPDVQLTHSC
Trigger: ACAGGAGTGGGTAAGTTGTACATCTGGTGGGCTGCACTCTAAACCAACGGGGGCTGCTTCTTCCAGAGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 72 bp ATCACAGGCCAGGTGGAGGCTCGCCCAAGATGCAGGTaGAAGATCTTCTCATATAATTCCCCCGAACTGGCC +
Preference number: 6 (lower is better)
Translates to: ITGQVEARPRCR*KIFSYNSPELA
Trigger: GGCCAGTTCGGGGGAATTATATGAGAAGATCTTGCACCTGCATCTTGGGCGAGCCTCCACCTGGCCTGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CAA 72 bp TGGTATACCCACCCTAGAGAGTACGAGTCCTGGCATTaGAGGAAGTACCACTTTAGGCCGGGCACGGTGGCT +
Preference number: 6 (lower is better)
Translates to: WYTHPREYESWH*RKYHFRPGTVA
Trigger: AGCCACCGTGCCCGGCCTAAAGTGGTACTTCCTCAAATGCCAGGACTCGTACTCTCTAGGGTGGGTATACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS TCA 72 bp GGAAACACCCCTTACAGTCCGCATGCCGTTACCTTATaGCCCTTCCGTTTTCCACGTAGTGCTGCACTCGGA +
Preference number: 6 (lower is better)
Translates to: GNTPYSPHAVTL*PFRFPRSAALG
Trigger: TCCGAGTGCAGCACTACGTGGAAAACGGAAGGGTCATAAGGTAACGGCATGCGGACTGTAAGGGGTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 72 bp AACCGCACACATGCCTTTTGGAACTGGCAGGGATTGTaGCTGCTTAGGGAATTCCTGGGAAACCCCCTTAGG +
Preference number: 6 (lower is better)
Translates to: NRTHAFWNWQGL*LLREFLGNPLR
Trigger: CCTAAGGGGGTTTCCCAGGAATTCCCTAAGCAGGCACAATCCCTGCCAGTTCCAAAAGGCATGTGTGCGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS CAA 72 bp CACAACCGCACACATGCCTTTTGGAACTGGCAGGGATaGTGCCTGCTTAGGGAATTCCTGGGAAACCCCCTT +
Preference number: 6 (lower is better)
Translates to: HNRTHAFWNWQG*CLLREFLGNPL
Trigger: AAGGGGGTTTCCCAGGAATTCCCTAAGCAGGCACAATCCCTGCCAGTTCCAAAAGGCATGTGTGCGGTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 72 bp TACTCATTGTTTCTGACCACACAGAGGCCAAAGAACTaGGCGTCTCTGATGCTCGCCACGTTGCACACTTGC +
Preference number: 6 (lower is better)
Translates to: YSLFLTTQRPKN*ASLMLATLHTC
Trigger: GCAAGTGTGCAACGTGGCGAGCATCAGAGACGCGCAGTTCTTTGGCCTCTGTGTGGTCAGAAACAATGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000283309.10
ENST00000358587.5
ENST00000440994.6
ENST00000468647.5
ENST00000509157.5
ENST00000511714.2
ENST00000644440.1
ENST00000646385.1
CDS CCA 72 bp AACCTTCCACACAACCGCACACATGCCTTTTGGAACTaGCAGGGATTGTGCCTGCTTAGGGAATTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: NLPHNRTHAFWN*QGLCLLREFLG
Trigger: TCCCAGGAATTCCCTAAGCAGGCACAATCCCTGCCAGTTCCAAAAGGCATGTGTGCGGTTGTGTGGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358587.5
CDS GCA 72 bp GCACACATGCCTTTTGGAACTGGCAGGGATTGTGCCTaGTTAGGGAATTCCTGGGAAACCCCCTTAGGTTTT +
Preference number: 6 (lower is better)
Translates to: AHMPFGTGRDCA*LGNSWETPLGF
Trigger: AAAACCTAAGGGGGTTTCCCAGGAATTCCCTAAGCAGGCACAATCCCTGCCAGTTCCAAAAGGCATGTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358587.5