Pregenerated sensors for FRGCA (Homo sapiens)
Ensembl gene IDs: ENSG00000236663Ensembl transcript IDs: ENST00000424933.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGTGGCAGGTGACCAGGGCCCATCCTGGAGGCTCAGTGCCAAGGTaGGCACCCGCCCTGGATAGGACAGGCCTCCATGGGACACCCACA | + |
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Preference number: 5 (lower is better) Translates to: EWQVTRAHPGGSVPR*APALDRTGLHGTPT Trigger: TGTGGGTGTCCCATGGAGGCCTGTCCTATCCAGGGCGGGTGCCCACCTTGGCACTGAGCCTCCAGGATGGGCCCTGGTCACCTGCCACTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS CCA 90 bp | CCAGGGCCCATCCTGGAGGCTCAGTGCCAAGGTGGGCACCCGCCCTaGATAGGACAGGCCTCCATGGGACACCCACACTCACTCGGACTA | + |
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Preference number: 5 (lower is better) Translates to: PGPILEAQCQGGHPP*IGQASMGHPHSLGL Trigger: TAGTCCGAGTGAGTGTGGGTGTCCCATGGAGGCCTGTCCTATCCAGGGCGGGTGCCCACCTTGGCACTGAGCCTCCAGGATGGGCCCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS CCA 90 bp | ACATGCCGTGAGGCTGAGGTGTATACTTGGGATGTGGGAGGAAACTaGAGGACCTGGAGAAAACCCGCGCGGACCTGGGGAGACCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: TCREAEVYTWDVGGN*RTWRKPARTWGDLL Trigger: GAGGAGGTCTCCCCAGGTCCGCGCGGGTTTTCTCCAGGTCCTCCAGTTTCCTCCCACATCCCAAGTATACACCTCAGCCTCACGGCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS TCA 90 bp | ATTCATTCATTTTCCAACTTGCTTTCTCCAGTTCAGAGTGGCAGGTaGCCAGGGCCCATCCTGGAGGCTCAGTGCCAAGGTGGGCACCCG | + |
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Preference number: 5 (lower is better) Translates to: IHSFSNLLSPVQSGR*PGPILEAQCQGGHP Trigger: CGGGTGCCCACCTTGGCACTGAGCCTCCAGGATGGGCCCTGGTCACCTGCCACTCTGAACTGGAGAAAGCAAGTTGGAAAATGAATGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS CCA 72 bp | GTGACCAGGGCCCATCCTGGAGGCTCAGTGCCAAGGTaGGCACCCGCCCTGGATAGGACAGGCCTCCATGGG | + |
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Preference number: 6 (lower is better) Translates to: VTRAHPGGSVPR*APALDRTGLHG Trigger: CCCATGGAGGCCTGTCCTATCCAGGGCGGGTGCCCACCTTGGCACTGAGCCTCCAGGATGGGCCCTGGTCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS GCA 72 bp | GAGAAAACCCGCGCGGACCTGGGGAGACCTCCTCAATaGTCCCTAGCTGCGGGCAGTGGCTTCTGCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: EKTRADLGRPPQ*SLAAGSGFCPG Trigger: CCCAGGGCAGAAGCCACTGCCCGCAGCTAGGGAGCATTGAGGAGGTCTCCCCAGGTCCGCGCGGGTTTTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS CCA 72 bp | ATCCTGGAGGCTCAGTGCCAAGGTGGGCACCCGCCCTaGATAGGACAGGCCTCCATGGGACACCCACACTCA | + |
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Preference number: 6 (lower is better) Translates to: ILEAQCQGGHPP*IGQASMGHPHS Trigger: TGAGTGTGGGTGTCCCATGGAGGCCTGTCCTATCCAGGGCGGGTGCCCACCTTGGCACTGAGCCTCCAGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS CCA 72 bp | GTGTATACTTGGGATGTGGGAGGAAACTGGAGGACCTaGAGAAAACCCGCGCGGACCTGGGGAGACCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VYTWDVGGNWRT*RKPARTWGDLL Trigger: GAGGAGGTCTCCCCAGGTCCGCGCGGGTTTTCTCCAGGTCCTCCAGTTTCCTCCCACATCCCAAGTATACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS CCA 72 bp | AGACATGCCGTGAGGCTGAGGTGTATACTTGGGATGTaGGAGGAAACTGGAGGACCTGGAGAAAACCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: RHAVRLRCILGM*EETGGPGENPR Trigger: GCGCGGGTTTTCTCCAGGTCCTCCAGTTTCCTCCCACATCCCAAGTATACACCTCAGCCTCACGGCATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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| CDS TCA 72 bp | TTTTCCAACTTGCTTTCTCCAGTTCAGAGTGGCAGGTaGCCAGGGCCCATCCTGGAGGCTCAGTGCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FSNLLSPVQSGR*PGPILEAQCQG Trigger: ACCTTGGCACTGAGCCTCCAGGATGGGCCCTGGTCACCTGCCACTCTGAACTGGAGAAAGCAAGTTGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424933.1 |
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