Pregenerated sensors for FRG1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000245685, ENSG00000283668Ensembl transcript IDs: ENST00000501825.2, ENST00000506276.5, ENST00000508156.5, ENST00000511785.2, ENST00000625597.2, ENST00000625604.1, ENST00000626099.1, ENST00000626186.1, ENST00000627361.1, ENST00000627544.2, ENST00000627734.1, ENST00000628363.1, ENST00000629800.1, ENST00000630346.1, ENST00000635836.1, ENST00000636352.1, ENST00000636608.1, ENST00000636693.2, ENST00000637146.1, ENST00000637210.1, ENST00000638033.2, ENST00000638105.1, ENST00000656003.1, ENST00000656083.1, ENST00000657714.1, ENST00000658563.1, ENST00000659297.1, ENST00000660244.1, ENST00000661293.1, ENST00000661788.1, ENST00000663567.1, ENST00000665991.1, ENST00000666678.1, ENST00000669980.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGCAAGGGAGGCAGGGGTCTGCACCTGCCCCTGGTACAACCTGCTaGCCCACAAGCACCCAAAGCCTGCTGCCGGCATCGTCTTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: RQGRQGSAPAPGTTC*PTSTQSLLPASSSF Trigger: AAAGGAAGACGATGCCGGCAGCAGGCTTTGGGTGCTTGTGGGGCAGCAGGTTGTACCAGGGGCAGGTGCAGACCCCTGCCTCCCTTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 90 bp | ATGAGGCACTGTGCGCAGAAGCAGAACCCGCTGCATCCAATGGTATaGTGCTATGCTGACCTCGAAGTCACTCGCCTTGGACACAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: MRHCAQKQNPLHPMV*CYADLEVTRLGHRP Trigger: CGGCCTGTGTCCAAGGCGAGTGACTTCGAGGTCAGCATAGCAGCATACCATTGGATGCAGCGGGTTCTGCTTCTGCGCACAGTGCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 90 bp | AGGCACTGTGCGCAGAAGCAGAACCCGCTGCATCCAATGGTATGCTaGTATGCTGACCTCGAAGTCACTCGCCTTGGACACAGGCCGTTA | + |
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Preference number: 5 (lower is better) Translates to: RHCAQKQNPLHPMVC*YADLEVTRLGHRPL Trigger: TAACGGCCTGTGTCCAAGGCGAGTGACTTCGAGGTCAGCATAGCAGCATACCATTGGATGCAGCGGGTTCTGCTTCTGCGCACAGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 90 bp | ATCATGAGTAAAAGCTCCCTGGGGCCTCCACAGGCGCCATGCAGATaGCATCACCATGCTTCCTGTACAGCCTTCTCTATCCTGGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: IMSKSSLGPPQAPCR*HHHASCTAFSILVP Trigger: GGGAACCAGGATAGAGAAGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTTACTCATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000636608.1 ENST00000637146.1 ENST00000656003.1 ENST00000658563.1 ENST00000659297.1 ENST00000661788.1 ENST00000665991.1 ENST00000666678.1 |
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| CDS GCA 90 bp | CCTTCCATCATGAGTAAAAGCTCCCTGGGGCCTCCACAGGCGCCATaGAGATGCCATCACCATGCTTCCTGTACAGCCTTCTCTATCCTG | + |
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Preference number: 5 (lower is better) Translates to: PSIMSKSSLGPPQAP*RCHHHASCTAFSIL Trigger: CAGGATAGAGAAGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTTACTCATGATGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000636608.1 ENST00000637146.1 ENST00000656003.1 ENST00000658563.1 ENST00000659297.1 ENST00000661788.1 ENST00000665991.1 ENST00000666678.1 |
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| CDS TCA 90 bp | TGCGCAGAAGCAGAACCCGCTGCATCCAATGGTATGCTGCTATGCTaGCCTCGAAGTCACTCGCCTTGGACACAGGCCGTTAACTTGACA | + |
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Preference number: 5 (lower is better) Translates to: CAEAEPAASNGMLLC*PRSHSPWTQAVNLT Trigger: TGTCAAGTTAACGGCCTGTGTCCAAGGCGAGTGACTTCGAGGTCAGCATAGCAGCATACCATTGGATGCAGCGGGTTCTGCTTCTGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 90 bp | CAGCAAACTCTTCCCAGGACAAAGAGCCCCACTCCCATTTTCTCTTaGTCCTCCTCGGACCATGTGATGTGCCTACTCCCTCTGTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: QQTLPRTKSPTPIFS*SSSDHVMCLLPLCL Trigger: AAGGCACAGAGGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGGGGCTCTTTGTCCTGGGAAGAGTTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS CCA 90 bp | GTCCCTGGGAATGGCCCCTCTGCTGATTGGCATTTGTCTGCAGGATaGATGCAGCCACCCCAAGACCTTCTGAATTCTCAAGGTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VPGNGPSADWHLSAG*MQPPQDLLNSQGSL Trigger: CAAGGAACCTTGAGAATTCAGAAGGTCTTGGGGTGGCTGCATCCATCCTGCAGACAAATGCCAATCAGCAGAGGGGCCATTCCCAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000501825.2 ENST00000511785.2 ENST00000625604.1 ENST00000626099.1 ENST00000626186.1 ENST00000627734.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000637210.1 ENST00000638033.2 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS CCA 90 bp | TCTATGGCATTCAGAAATGCAGGCATGCATGCTGTGTGTCTTACCTaGCCAAGGCCCAAGTCAGCCAGACATGTGTCCCTGGGAATGGCC | + |
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Preference number: 5 (lower is better) Translates to: SMAFRNAGMHAVCLT*PRPKSARHVSLGMA Trigger: GGCCATTCCCAGGGACACATGTCTGGCTGACTTGGGCCTTGGCCAGGTAAGACACACAGCATGCATGCCTGCATTTCTGAATGCCATAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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| CDS CCA 90 bp | CTGTCCTCCTCTCCTTCCTCCCACGTGTCGGGATCAGTGATGAAGTaGAGGCACCTTTCAGAGAATGTATCCAGGATCTCCTTCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LSSSPSSHVSGSVMK*RHLSENVSRISFSS Trigger: AGAGGAGAAGGAGATCCTGGATACATTCTCTGAAAGGTGCCTCCACTTCATCACTGATCCCGACACGTGGGAGGAAGGAGAGGAGGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS TCA 90 bp | TGGACAGAGTTCCTCAGCCTGGTCAGTTGCTCCTGGGATGGTGGGTaGGTCAGAACATGTGTCTTTATTTGTCAAGTGGGGGTTAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: WTEFLSLVSCSWDGG*VRTCVFICQVGVKP Trigger: TGGCTTAACCCCCACTTGACAAATAAAGACACATGTTCTGACTCACCCACCATCCCAGGAGCAACTGACCAGGCTGAGGAACTCTGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 90 bp | TTTATGACTTGTCAGGTCTATGGCATTCAGAAATGCAGGCATGCATaGTGTGTGTCTTACCTGGCCAAGGCCCAAGTCAGCCAGACATGT | + |
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Preference number: 5 (lower is better) Translates to: FMTCQVYGIQKCRHA*CVSYLAKAQVSQTC Trigger: ACATGTCTGGCTGACTTGGGCCTTGGCCAGGTAAGACACACAGCATGCATGCCTGCATTTCTGAATGCCATAGACCTGACAAGTCATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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| CDS GCA 90 bp | CTATTTTATGACTTGTCAGGTCTATGGCATTCAGAAATGCAGGCATaGATGCTGTGTGTCTTACCTGGCCAAGGCCCAAGTCAGCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: LFYDLSGLWHSEMQA*MLCVLPGQGPSQPD Trigger: GTCTGGCTGACTTGGGCCTTGGCCAGGTAAGACACACAGCATGCATGCCTGCATTTCTGAATGCCATAGACCTGACAAGTCATAAAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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| CDS CCA 90 bp | TTCCTCCCCTCAGCAACGCACAGTCAATGTTTCCACTTTCCACAGTaGCTTTCAACAGCAAAGTTCAGCCTTTACTCCAAACTGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: FLPSATHSQCFHFPQ*LSTAKFSLYSKLAS Trigger: TGATGCCAGTTTGGAGTAAAGGCTGAACTTTGCTGTTGAAAGCCACTGTGGAAAGTGGAAACATTGACTGTGCGTTGCTGAGGGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS CCA 90 bp | AGCCATCAGCCAACCTCCATGGAAATCAAACACTGGTTTGAGTGGTaGCTTGGGAGAAATACACACCAACAATCAACATGTCCTGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: SHQPTSMEIKHWFEW*LGRNTHQQSTCPVS Trigger: CGAGACAGGACATGTTGATTGTTGGTGTGTATTTCTCCCAAGCCACCACTCAAACCAGTGTTTGATTTCCATGGAGGTTGGCTGATGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000511785.2 ENST00000626186.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000638033.2 |
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| CDS CCA 90 bp | CCTGGGATGGTGGGTGAGTCAGAACATGTGTCTTTATTTGTCAAGTaGGGGTTAAGCCAGGCATTGTCTAAGGTGCCTCACAGAGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: PGMVGESEHVSLFVK*GLSQALSKVPHRVN Trigger: ATTAACTCTGTGAGGCACCTTAGACAATGCCTGGCTTAACCCCCACTTGACAAATAAAGACACATGTTCTGACTCACCCACCATCCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS TCA 90 bp | CAAGGTTCCTTGAAGAACTGCAGGGAACTTTGCTTCTTTGATTACTaGAACTGGAAGATGCAGCAAACTCTTCCCAGGACAAAGAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: QGSLKNCRELCFFDY*NWKMQQTLPRTKSP Trigger: GGGGCTCTTTGTCCTGGGAAGAGTTTGCTGCATCTTCCAGTTTCAGTAATCAAAGAAGCAAAGTTCCCTGCAGTTCTTCAAGGAACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS TCA 90 bp | TATGCTGACCTCGAAGTCACTCGCCTTGGACACAGGCCGTTAACTTaGCATGGTGATTTATTCGCCAATAAGCACATCTCCCATATCACA | + |
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Preference number: 5 (lower is better) Translates to: YADLEVTRLGHRPLT*HGDLFANKHISHIT Trigger: TGTGATATGGGAGATGTGCTTATTGGCGAATAAATCACCATGTCAAGTTAACGGCCTGTGTCCAAGGCGAGTGACTTCGAGGTCAGCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS CCA 90 bp | TTGATACTATCTCCCAGCCCACTGAGACAAGGATGCGTCTATTTCTaGGTAAGTAAATACATTCCTCCCCTCAGCAACGCACAGTCAATG | + |
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Preference number: 5 (lower is better) Translates to: LILSPSPLRQGCVYF*VSKYIPPLSNAQSM Trigger: CATTGACTGTGCGTTGCTGAGGGGAGGAATGTATTTACTTACCCAGAAATAGACGCATCCTTGTCTCAGTGGGCTGGGAGATAGTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS GCA 90 bp | CAACAGAAAGGATTGATACTATCTCCCAGCCCACTGAGACAAGGATaGGTCTATTTCTGGGTAAGTAAATACATTCCTCCCCTCAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: QQKGLILSPSPLRQG*VYFWVSKYIPPLSN Trigger: GTTGCTGAGGGGAGGAATGTATTTACTTACCCAGAAATAGACGCATCCTTGTCTCAGTGGGCTGGGAGATAGTATCAATCCTTTCTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS GCA 90 bp | TTCACCATCTGCCATGATTATAAGTTTCCTGAAGCCTCCCAGCCATaGTTCCTGTACAGCCTGTGGAATTGTGAGTCAGTTAAACCTCTT | + |
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Preference number: 5 (lower is better) Translates to: FTICHDYKFPEASQP*FLYSLWNCESVKPL Trigger: AAGAGGTTTAACTGACTCACAATTCCACAGGCTGTACAGGAAGCATGGCTGGGAGGCTTCAGGAAACTTATAATCATGGCAGATGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CCA 90 bp | GCTCAAGCTAAAAGCCATCAGCCAACCTCCATGGAAATCAAACACTaGTTTGAGTGGTGGCTTGGGAGAAATACACACCAACAATCAACA | + |
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Preference number: 5 (lower is better) Translates to: AQAKSHQPTSMEIKH*FEWWLGRNTHQQST Trigger: TGTTGATTGTTGGTGTGTATTTCTCCCAAGCCACCACTCAAACCAGTGTTTGATTTCCATGGAGGTTGGCTGATGGCTTTTAGCTTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000511785.2 ENST00000626186.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000638033.2 |
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| CDS TCA 90 bp | CAAGGTTCCTTGAAGAACTGCAGGGAACTTTGCTTCTTTGATTACTaGAACTGGAAGATGCAGCAAACTCTTCCCAGGACAAAGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: QGSLKNCRELCFFDY*NWKMQQTLPRTKSF Trigger: AAAGCTCTTTGTCCTGGGAAGAGTTTGCTGCATCTTCCAGTTTCAGTAATCAAAGAAGCAAAGTTCCCTGCAGTTCTTCAAGGAACCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000511785.2 ENST00000630346.1 ENST00000636693.2 ENST00000638033.2 |
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| CDS TCA 90 bp | GAATTCTCAAGGTTCCTTGAAGAACTGCAGGGAACTTTGCTTCTTTaGTTACTGAAACTGGAAGATGCAGCAAACTCTTCCCAGGACAAA | + |
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Preference number: 5 (lower is better) Translates to: EFSRFLEELQGTLLL*LLKLEDAANSSQDK Trigger: TTTGTCCTGGGAAGAGTTTGCTGCATCTTCCAGTTTCAGTAATCAAAGAAGCAAAGTTCCCTGCAGTTCTTCAAGGAACCTTGAGAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000501825.2 ENST00000511785.2 ENST00000625604.1 ENST00000626099.1 ENST00000626186.1 ENST00000627734.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000637210.1 ENST00000638033.2 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS TCA 90 bp | TACTCCAAACTGGCATCAGAGCAGGACATAACCAAGCATAACATATaGCTCTCATTGCCTTCAATTTTTCAATCACTGCAGCTGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: YSKLASEQDITKHNI*LSLPSIFQSLQLSK Trigger: TTTGCTCAGCTGCAGTGATTGAAAAATTGAAGGCAATGAGAGTCATATGTTATGCTTGGTTATGTCCTGCTCTGATGCCAGTTTGGAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS TCA 90 bp | ATAACATATGACTCTCATTGCCTTCAATTTTTCAATCACTGCAGCTaGGCAAACACGTTTTCCCTGAAGGCTTTGAATCATGGAATTATC | + |
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Preference number: 5 (lower is better) Translates to: ITYDSHCLQFFNHCS*ANTFSLKALNHGII Trigger: GATAATTCCATGATTCAAAGCCTTCAGGGAAAACGTGTTTGCTCAGCTGCAGTGATTGAAAAATTGAAGGCAATGAGAGTCATATGTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS GCA 72 bp | GGGGCCTCCACAGGCGCCATGCAGATGCCATCACCATaGTTCCTGTACAGCCGCTGCAGAGGAATCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: GASTGAMQMPSP*FLYSRCRGITV Trigger: CACGGTGATTCCTCTGCAGCGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657714.1 ENST00000661293.1 ENST00000663567.1 |
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| CDS GCA 72 bp | AAAAGCTCCCTGGGGCCTCCACAGGCGCCATGCAGATaGCATCACCATGCTTCCTGTACAGCCGCTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: KSSLGPPQAPCR*HHHASCTAAAE Trigger: CTCTGCAGCGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657714.1 ENST00000661293.1 ENST00000663567.1 |
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| CDS GCA 72 bp | GGGGCCTCCACAGGCGCCATGCAGATGCCATCACCATaGTTCCTGTACAGCCTTCTCTATCCTGGTTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GASTGAMQMPSP*FLYSLLYPGSL Trigger: GAGGGAACCAGGATAGAGAAGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000636608.1 ENST00000637146.1 ENST00000656003.1 ENST00000658563.1 ENST00000659297.1 ENST00000661788.1 ENST00000665991.1 ENST00000666678.1 |
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| CDS GCA 72 bp | ATGAGTAAAAGCTCCCTGGGGCCTCCACAGGCGCCATaGAGATGCCATCACCATGCTTCCTGTACAGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: MSKSSLGPPQAP*RCHHHASCTAA Trigger: AGCGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTTACTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657714.1 ENST00000661293.1 ENST00000663567.1 |
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| CDS CCA 72 bp | GGCACTGTGCGCAGAAGCAGAACCCGCTGCATCCAATaGTATGCTGCTATGCTGACCTCGAAGTCACTCGCC | + |
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Preference number: 6 (lower is better) Translates to: GTVRRSRTRCIQ*YAAMLTSKSLA Trigger: GGCGAGTGACTTCGAGGTCAGCATAGCAGCATACCATTGGATGCAGCGGGTTCTGCTTCTGCGCACAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS TCA 72 bp | CATGTGATGTGCCTACTCCCTCTGTGCCTTCCATCATaGGTAAAAGCTCCCTGGGGCCTCCACAGGCGCCAT | + |
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Preference number: 6 (lower is better) Translates to: HVMCLLPLCLPS*VKAPWGLHRRH Trigger: ATGGCGCCTGTGGAGGCCCCAGGGAGCTTTTACTCATGATGGAAGGCACAGAGGGAGTAGGCACATCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 24 transcripts: ENST00000501825.2 ENST00000506276.5 ENST00000508156.5 ENST00000625597.2 ENST00000625604.1 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 ENST00000636608.1 ENST00000637146.1 ENST00000637210.1 ENST00000638105.1 ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000658563.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000661788.1 ENST00000663567.1 ENST00000665991.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS TCA 72 bp | GCAGAACCCGCTGCATCCAATGGTATGCTGCTATGCTaGCCTCGAAGTCACTCGCCTTGGACACAGGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: AEPAASNGMLLC*PRSHSPWTQAV Trigger: AACGGCCTGTGTCCAAGGCGAGTGACTTCGAGGTCAGCATAGCAGCATACCATTGGATGCAGCGGGTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 72 bp | ATGAGTAAAAGCTCCCTGGGGCCTCCACAGGCGCCATaGAGATGCCATCACCATGCTTCCTGTACAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: MSKSSLGPPQAP*RCHHHASCTAT Trigger: TGTGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTTACTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000501825.2 ENST00000508156.5 ENST00000625604.1 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS GCA 72 bp | AAAAGCTCCCTGGGGCCTCCACAGGCGCCATGCAGATaGCATCACCATGCTTCCTGTACAGCCTTCTCTATC | + |
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Preference number: 6 (lower is better) Translates to: KSSLGPPQAPCR*HHHASCTAFSI Trigger: GATAGAGAAGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000636608.1 ENST00000637146.1 ENST00000656003.1 ENST00000658563.1 ENST00000659297.1 ENST00000661788.1 ENST00000665991.1 ENST00000666678.1 |
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| CDS GCA 72 bp | ATGAGTAAAAGCTCCCTGGGGCCTCCACAGGCGCCATaGAGATGCCATCACCATGCTTCCTGTACAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MSKSSLGPPQAP*RCHHHASCTAF Trigger: GAAGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTTACTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000636608.1 ENST00000637146.1 ENST00000656003.1 ENST00000658563.1 ENST00000659297.1 ENST00000661788.1 ENST00000665991.1 ENST00000666678.1 |
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| CDS GCA 72 bp | GCGCAGAAGCAGAACCCGCTGCATCCAATGGTATGCTaGTATGCTGACCTCGAAGTCACTCGCCTTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: AQKQNPLHPMVC*YADLEVTRLGH Trigger: GTGTCCAAGGCGAGTGACTTCGAGGTCAGCATAGCAGCATACCATTGGATGCAGCGGGTTCTGCTTCTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS CAA 90 bp | GCAGCAAACTCTTCCCAGGACAAAGAGCCCCACTCCCATTTTCTCTaGCTCCTCCTCGGACCATGTGATGTGCCTACTCCCTCTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AANSSQDKEPHSHFL*LLLGPCDVPTPSVP Trigger: AGGCACAGAGGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGGGGCTCTTTGTCCTGGGAAGAGTTTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS GCA 72 bp | AAAAGCTCCCTGGGGCCTCCACAGGCGCCATGCAGATaGCATCACCATGCTTCCTGTACAGCCACATTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: KSSLGPPQAPCR*HHHASCTATLY Trigger: ATACAATGTGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTGTGGAGGCCCCAGGGAGCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000501825.2 ENST00000508156.5 ENST00000625604.1 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS GCA 72 bp | CTTCCCAGGACAAAGAGCCCCACTCCCATTTTCTCTTaGTCCTCCTCGGACCATGTGATGTGCCTACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPRTKSPTPIFS*SSSDHVMCLLP Trigger: AGGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGGGGCTCTTTGTCCTGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS GCA 72 bp | AACAGGAGAGTTGCAGCCCCCACTCCCATTTTCTCTTaGTCCTCCTCGGACCATGTGATGTGCCTACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NRRVAAPTPIFS*SSSDHVMCLLP Trigger: AGGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGGGGGCTGCAACTCTCCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000656003.1 ENST00000657714.1 ENST00000659297.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 |
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| CDS GCA 72 bp | TGTGCGCAGAAGCAGAACCCGCTGCATCCAATGGTATaGTGCTATGCTGACCTCGAAGTCACTCGCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CAQKQNPLHPMV*CYADLEVTRLG Trigger: TCCAAGGCGAGTGACTTCGAGGTCAGCATAGCAGCATACCATTGGATGCAGCGGGTTCTGCTTCTGCGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS CAA 72 bp | TCTTCCCAGGACAAAGAGCCCCACTCCCATTTTCTCTaGCTCCTCCTCGGACCATGTGATGTGCCTACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSQDKEPHSHFL*LLLGPCDVPTP Trigger: GGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGGGGCTCTTTGTCCTGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS TCA 72 bp | CCACTCCCATTTTCTCTTGCTCCTCCTCGGACCATGTaGTGTGCCTACTCCCTCTGTGCCTTCCATCATGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLPFSLAPPRTM*CAYSLCAFHHE Trigger: CTCATGATGGAAGGCACAGAGGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 24 transcripts: ENST00000501825.2 ENST00000506276.5 ENST00000508156.5 ENST00000625597.2 ENST00000625604.1 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 ENST00000636608.1 ENST00000637146.1 ENST00000637210.1 ENST00000638105.1 ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000658563.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000661788.1 ENST00000663567.1 ENST00000665991.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 72 bp | GCACATCTCCCATATCACAGATCAGCGAGTGGAGTGTaGTGCAAATGGTGTGGTGGCCTTGAACCCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: AHLPYHRSASGV*CKWCGGLEPLR Trigger: TCTCAGGGGTTCAAGGCCACCACACCATTTGCAGCACACTCCACTCGCTGATCTGTGATATGGGAGATGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 72 bp | CTGGCTCACTTGCTCTCCTTCCGCCATGGTAGAACGTaGCTTGCTTCCCCCTTCACCATCTGCCATGATTAT | + |
|
Preference number: 6 (lower is better) Translates to: LAHLLSFRHGRT*LASPFTICHDY Trigger: ATAATCATGGCAGATGGTGAAGGGGGAAGCAAGGCACGTTCTACCATGGCGGAAGGAGAGCAAGTGAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CCA 72 bp | TTCAGAAATGCAGGCATGCATGCTGTGTGTCTTACCTaGCCAAGGCCCAAGTCAGCCAGACATGTGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FRNAGMHAVCLT*PRPKSARHVSL Trigger: CAGGGACACATGTCTGGCTGACTTGGGCCTTGGCCAGGTAAGACACACAGCATGCATGCCTGCATTTCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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| CDS CCA 72 bp | GTGGGGCCTGGTAGGGTCATGGGGATGGATCTCTCATaGCCTGATGCCGTCCTTGTGATAGTGAATTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGPGRVMGMDLS*PDAVLVIVNSF Trigger: GAAAGAATTCACTATCACAAGGACGGCATCAGGCCATGAGAGATCCATCCCCATGACCCTACCAGGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CAA 72 bp | CCATCCACTATGCAGTATCCCCACTCCCATTTTCTCTaGCTCCTCCTCGGACCATGTGATGTGCCTACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSTMQYPHSHFL*LLLGPCDVPTP Trigger: GGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGGGGATACTGCATAGTGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508156.5 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 |
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| CDS GCA 72 bp | CATCCACTATGCAGTATCCCCACTCCCATTTTCTCTTaGTCCTCCTCGGACCATGTGATGTGCCTACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HPLCSIPTPIFS*SSSDHVMCLLP Trigger: AGGGAGTAGGCACATCACATGGTCCGAGGAGGAGCAAGAGAAAATGGGAGTGGGGATACTGCATAGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000508156.5 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 |
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| CDS CCA 72 bp | TCTCCTTCCTCCCACGTGTCGGGATCAGTGATGAAGTaGAGGCACCTTTCAGAGAATGTATCCAGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPSSHVSGSVMK*RHLSENVSRIS Trigger: GGAGATCCTGGATACATTCTCTGAAAGGTGCCTCCACTTCATCACTGATCCCGACACGTGGGAGGAAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 72 bp | GACTTGTCAGGTCTATGGCATTCAGAAATGCAGGCATaGATGCTGTGTGTCTTACCTGGCCAAGGCCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLSGLWHSEMQA*MLCVLPGQGPS Trigger: ACTTGGGCCTTGGCCAGGTAAGACACACAGCATGCATGCCTGCATTTCTGAATGCCATAGACCTGACAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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| CDS GCA 72 bp | CATGGTAGAACGTGCCTTGCTTCCCCCTTCACCATCTaGCATGATTATAAGTTTCCTGAAGCCTCCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HGRTCLASPFTI*HDYKFPEASQP Trigger: TGGCTGGGAGGCTTCAGGAAACTTATAATCATGGCAGATGGTGAAGGGGGAAGCAAGGCACGTTCTACCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CCA 72 bp | AATGGCCCCTCTGCTGATTGGCATTTGTCTGCAGGATaGATGCAGCCACCCCAAGACCTTCTGAATTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: NGPSADWHLSAG*MQPPQDLLNSQ Trigger: TTGAGAATTCAGAAGGTCTTGGGGTGGCTGCATCCATCCTGCAGACAAATGCCAATCAGCAGAGGGGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000501825.2 ENST00000511785.2 ENST00000625604.1 ENST00000626099.1 ENST00000626186.1 ENST00000627734.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000637210.1 ENST00000638033.2 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS CAA 72 bp | CTCACTTGCTCTCCTTCCGCCATGGTAGAACGTGCCTaGCTTCCCCCTTCACCATCTGCCATGATTATAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LTCSPSAMVERA*LPPSPSAMIIS Trigger: ACTTATAATCATGGCAGATGGTGAAGGGGGAAGCAAGGCACGTTCTACCATGGCGGAAGGAGAGCAAGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CCA 72 bp | TCTCCCAGCCCACTGAGACAAGGATGCGTCTATTTCTaGGTAAGTAAATACATTCCTCCCCTCAGCAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPSPLRQGCVYF*VSKYIPPLSNA Trigger: TGCGTTGCTGAGGGGAGGAATGTATTTACTTACCCAGAAATAGACGCATCCTTGTCTCAGTGGGCTGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS CAA 90 bp | CAGGCGCCATGCAGATGCCATCACCATGCTTCCTGTACAGCCACATaGTATGAGACGAGGAAACAGATTTTCATCAAAACCCTGGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QAPCRCHHHASCTAT*YETRKQIFIKTLES Trigger: GCTTTCCAGGGTTTTGATGAAAATCTGTTTCCTCGTCTCATACAATGTGGCTGTACAGGAAGCATGGTGATGGCATCTGCATGGCGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000501825.2 ENST00000508156.5 ENST00000625604.1 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS CCA 72 bp | GTGGGTGAGTCAGAACATGTGTCTTTATTTGTCAAGTaGGGGTTAAGCCAGGCATTGTCTAAGGTGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VGESEHVSLFVK*GLSQALSKVPH Trigger: GTGAGGCACCTTAGACAATGCCTGGCTTAACCCCCACTTGACAAATAAAGACACATGTTCTGACTCACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS CCA 72 bp | AGAGTTCCTCAGCCTGGTCAGTTGCTCCTGGGATGGTaGGTGAGTCAGAACATGTGTCTTTATTTGTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RVPQPGQLLLGW*VSQNMCLYLSS Trigger: ACTTGACAAATAAAGACACATGTTCTGACTCACCCACCATCCCAGGAGCAACTGACCAGGCTGAGGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS CCA 72 bp | CCTATAAATCTCATGATGAAATGTAATCCTCAGTGTTaGAGGTGGGGCCTGGTAGGGTCATGGGGATGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PINLMMKCNPQC*RWGLVGSWGWI Trigger: GATCCATCCCCATGACCCTACCAGGCCCCACCTCCAACACTGAGGATTACATTTCATCATGAGATTTATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CAA 72 bp | GCCGTCCTTGTGATAGTGAATTCTTTCAAGATCTGGTaGTGTAAGGGTGTGTGGTACTTACCCCCACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AVLVIVNSFKIW*CKGVWYLPPLP Trigger: TGGGAGTGGGGGTAAGTACCACACACCCTTACACAACCAGATCTTGAAAGAATTCACTATCACAAGGACGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CAA 90 bp | ATCAGCCAACCTCCATGGAAATCAAACACTGGTTTGAGTGGTGGCTaGGGAGAAATACACACCAACAATCAACATGTCCTGTCTCGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISQPPWKSNTGLSGG*GEIHTNNQHVLSRC Trigger: ACACCGAGACAGGACATGTTGATTGTTGGTGTGTATTTCTCCCAAGCCACCACTCAAACCAGTGTTTGATTTCCATGGAGGTTGGCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000511785.2 ENST00000626186.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000638033.2 |
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| CDS TCA 72 bp | CCATCAGCCAACCTCCATGGAAATCAAACACTGGTTTaGGTGGTGGCTTGGGAGAAATACACACCAACAATC | + |
|
Preference number: 6 (lower is better) Translates to: PSANLHGNQTLV*VVAWEKYTPTI Trigger: GATTGTTGGTGTGTATTTCTCCCAAGCCACCACTCAAACCAGTGTTTGATTTCCATGGAGGTTGGCTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000511785.2 ENST00000626186.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000638033.2 |
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| CDS GCA 72 bp | TGTCAGCATTCCATCCTACGGGCTGTAATTCAGAGCTaGTGTACAAGTCACACGCTGTTCTTATCAGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: CQHSILRAVIQS*CTSHTLFLSEI Trigger: GATTTCTGATAAGAACAGCGTGTGACTTGTACAGCAGCTCTGAATTACAGCCCGTAGGATGGAATGCTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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| CDS GCA 72 bp | GGATTGATACTATCTCCCAGCCCACTGAGACAAGGATaGGTCTATTTCTGGGTAAGTAAATACATTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GLILSPSPLRQG*VYFWVSKYIPP Trigger: GGGAGGAATGTATTTACTTACCCAGAAATAGACGCATCCTTGTCTCAGTGGGCTGGGAGATAGTATCAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS CCA 72 bp | AAAAGCCATCAGCCAACCTCCATGGAAATCAAACACTaGTTTGAGTGGTGGCTTGGGAGAAATACACACCAA | + |
|
Preference number: 6 (lower is better) Translates to: KSHQPTSMEIKH*FEWWLGRNTHQ Trigger: TTGGTGTGTATTTCTCCCAAGCCACCACTCAAACCAGTGTTTGATTTCCATGGAGGTTGGCTGATGGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000511785.2 ENST00000626186.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000638033.2 |
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| CDS CAA 90 bp | AAGCTAAAAGCCATCAGCCAACCTCCATGGAAATCAAACACTGGTTaGAGTGGTGGCTTGGGAGAAATACACACCAACAATCAACATGTC | + |
|
Preference number: 6 (lower is better) Translates to: KLKAISQPPWKSNTG*SGGLGEIHTNNQHV Trigger: GACATGTTGATTGTTGGTGTGTATTTCTCCCAAGCCACCACTCAAACCAGTGTTTGATTTCCATGGAGGTTGGCTGATGGCTTTTAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000511785.2 ENST00000626186.1 ENST00000629800.1 ENST00000630346.1 ENST00000636693.2 ENST00000638033.2 |
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| CDS TCA 72 bp | ATGCCATCACCATGCTTCCTGTACAGCCACATTGTATaGGACGAGGAAACAGATTTTCATCAAAACCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: MPSPCFLYSHIV*DEETDFHQNPG Trigger: TCCAGGGTTTTGATGAAAATCTGTTTCCTCGTCTCATACAATGTGGCTGTACAGGAAGCATGGTGATGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000501825.2 ENST00000508156.5 ENST00000625604.1 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS CCA 72 bp | TCAGCAACGCACAGTCAATGTTTCCACTTTCCACAGTaGCTTTCAACAGCAAAGTTCAGCCTTTACTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SATHSQCFHFPQ*LSTAKFSLYSK Trigger: TTTGGAGTAAAGGCTGAACTTTGCTGTTGAAAGCCACTGTGGAAAGTGGAAACATTGACTGTGCGTTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS CAA 72 bp | TGCAGATGCCATCACCATGCTTCCTGTACAGCCACATaGTATGAGACGAGGAAACAGATTTTCATCAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: CRCHHHASCTAT*YETRKQIFIKT Trigger: GGTTTTGATGAAAATCTGTTTCCTCGTCTCATACAATGTGGCTGTACAGGAAGCATGGTGATGGCATCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000501825.2 ENST00000508156.5 ENST00000625604.1 ENST00000627544.2 ENST00000635836.1 ENST00000636352.1 ENST00000637210.1 ENST00000638105.1 ENST00000656083.1 ENST00000660244.1 ENST00000669980.1 |
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| CDS CAA 72 bp | GTGTCTTTATTTGTCAAGTGGGGGTTAAGCCAGGCATaGTCTAAGGTGCCTCACAGAGTTAATATTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSLFVKWGLSQA*SKVPHRVNILC Trigger: GCAAAGAATATTAACTCTGTGAGGCACCTTAGACAATGCCTGGCTTAACCCCCACTTGACAAATAAAGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS TCA 72 bp | GACTCTCATTGCCTTCAATTTTTCAATCACTGCAGCTaGGCAAACACGTTTTCCCTGAAGGCTTTGAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: DSHCLQFFNHCS*ANTFSLKALNH Trigger: ATGATTCAAAGCCTTCAGGGAAAACGTGTTTGCTCAGCTGCAGTGATTGAAAAATTGAAGGCAATGAGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000506276.5 ENST00000625597.2 ENST00000627361.1 ENST00000628363.1 ENST00000636608.1 ENST00000637146.1 |
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| CDS TCA 72 bp | GGGCAGATTTCCCCCTTGTTGTTCTTAGATGGTAAGTaGGTTCTCATGACATCTGATGGTTTAAACATATGG | + |
|
Preference number: 6 (lower is better) Translates to: GQISPLLFLDGK*VLMTSDGLNIW Trigger: CCATATGTTTAAACCATCAGATGTCATGAGAACTCACTTACCATCTAAGAACAACAAGGGGGAAATCTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CAA 90 bp | TCAGAACATGTGTCTTTATTTGTCAAGTGGGGGTTAAGCCAGGCATaGTCTAAGGTGCCTCACAGAGTTAATATTCTTTGCTGTGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SEHVSLFVKWGLSQA*SKVPHRVNILCCEL Trigger: AAGTTCACAGCAAAGAATATTAACTCTGTGAGGCACCTTAGACAATGCCTGGCTTAACCCCCACTTGACAAATAAAGACACATGTTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000656003.1 ENST00000656083.1 ENST00000657714.1 ENST00000659297.1 ENST00000660244.1 ENST00000661293.1 ENST00000663567.1 ENST00000666678.1 ENST00000669980.1 |
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| CDS GCA 72 bp | TCCTGCATTAATTCACTTAGGATAATGGCCTCCGGCTaGATCCATGTTGTTTCAAAGGACATGATTTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SCINSLRIMASG*IHVVSKDMILL Trigger: TAACAAAATCATGTCCTTTGAAACAACATGGATGCAGCCGGAGGCCATTATCCTAAGTGAATTAATGCAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS CCA 72 bp | AATTATTGGTTGCTATTTTATGACTTGTCAGGTCTATaGCATTCAGAAATGCAGGCATGCATGCTGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: NYWLLFYDLSGL*HSEMQACMLCV Trigger: GACACACAGCATGCATGCCTGCATTTCTGAATGCCATAGACCTGACAAGTCATAAAATAGCAACCAATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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| CDS CCA 72 bp | TCCATGAGTACCCAGTGTTTAGCTCCCACTTATAAGTaGGATCATGTGGTATTTTGTTTTATGTTCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SMSTQCLAPTYK*DHVVFCFMFLH Trigger: ATGCAGGAACATAAAACAAAATACCACATGATCCCACTTATAAGTGGGAGCTAAACACTGGGTACTCATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658563.1 ENST00000661788.1 ENST00000665991.1 |
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| CDS TCA 72 bp | GAGCACTCTAACATAAAATTATTGGTTGCTATTTTATaGCTTGTCAGGTCTATGGCATTCAGAAATGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: EHSNIKLLVAIL*LVRSMAFRNAG Trigger: GCCTGCATTTCTGAATGCCATAGACCTGACAAGTCATAAAATAGCAACCAATAATTTTATGTTAGAGTGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000501825.2 ENST00000625604.1 ENST00000626099.1 ENST00000627734.1 ENST00000637210.1 ENST00000638105.1 |
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