RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FREM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164946

Ensembl transcript IDs: ENST00000380875.7, ENST00000380880.4, ENST00000380894.5, ENST00000427623.5, ENST00000466679.1, ENST00000485068.5, ENST00000486223.1, ENST00000497634.2

Found 804 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTaGTCAAGATGTGACAGTAGCCTGAGTGCTGGTGCCACCCGGCTG +
Preference number: 1 (lower is better)
Translates to: PCKLGQPHSRCLSAL*SRCDSSLSAGATRL
Trigger: CAGCCGGGTGGCACCAGCACTCAGGCTACTGTCACATCTTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR TCA 90 bp TCTTTCCAAGCTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTaGAGGCAACAGGTTCACCACCGATCCACTCCCAGTGGCCAGCAT +
Preference number: 1 (lower is better)
Translates to: SFQAWSVERALFSHW*RQQVHHRSTPSGQH
Trigger: ATGCTGGCCACTGGGAGTGGATCGGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAGCTTGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 90 bp GACCCTGGGGGCAGCAGATGCCAAATGCCCTTCTCCCATGTGCTGTaGTTGCTTTGGTTGGAGGAATATGAAGGATGGCATTGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: DPGGSRCQMPFSHVL*LLWLEEYEGWHCPP
Trigger: AGGAGGACAATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGCCCCCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR GCA 90 bp CAGAAGTGGTGGATGAGGAAGACCCTGGGGGCAGCAGATGCCAAATaGCCTTCTCCCATGTGCTGTGCTTGCTTTGGTTGGAGGAATATG +
Preference number: 1 (lower is better)
Translates to: QKWWMRKTLGAADAK*PSPMCCACFGWRNM
Trigger: CATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGCCCCCAGGGTCTTCCTCATCCACCACTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR TCA 90 bp TGGAAGAGGTCTTCTTTCCAGATGAAAGGAACCAGAAGTGGTGGATaGGGAAGACCCTGGGGGCAGCAGATGCCAAATGCCCTTCTCCCA +
Preference number: 1 (lower is better)
Translates to: WKRSSFQMKGTRSGG*GRPWGQQMPNALLP
Trigger: TGGGAGAAGGGCATTTGGCATCTGCTGCCCCCAGGGTCTTCCTCATCCACCACTTCTGGTTCCTTTCATCTGGAAAGAAGACCTCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR TCA 90 bp ATTCCAGGTGCCTTTCTGCTCTGTGATCAAGATGTGACAGTAGCCTaGGTGCTGGTGCCACCCGGCTGGACAGGATTTGTCTTCCACATC +
Preference number: 1 (lower is better)
Translates to: IPGAFLLCDQDVTVA*VLVPPGWTGFVFHI
Trigger: GATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAGCACTCAGGCTACTGTCACATCTTGATCACAGAGCAGAAAGGCACCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 90 bp AGGAAGACCCTGGGGGCAGCAGATGCCAAATGCCCTTCTCCCATGTaGTGTGCTTGCTTTGGTTGGAGGAATATGAAGGATGGCATTGTC +
Preference number: 1 (lower is better)
Translates to: RKTLGAADAKCPSPM*CACFGWRNMKDGIV
Trigger: GACAATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGCCCCCAGGGTCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR CCA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTaGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAG +
Preference number: 1 (lower is better)
Translates to: RTFSHQCPRATACAA*RIQLQGCPGIVPCK
Trigger: CTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 90 bp CTGGGGGCAGCAGATGCCAAATGCCCTTCTCCCATGTGCTGTGCTTaGTTTGGTTGGAGGAATATGAAGGATGGCATTGTCCTCCTTTTG +
Preference number: 1 (lower is better)
Translates to: LGAADAKCPSPMCCA*FGWRNMKDGIVLLL
Trigger: CAAAAGGAGGACAATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGCCCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR GCA 90 bp CAAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTaGCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTG +
Preference number: 1 (lower is better)
Translates to: QKDFLPPMSQSHRMC*LENTVTRLPRYCSL
Trigger: CAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 90 bp CTCCCATTGGTGAAGGCAACAGGTTCACCACCGATCCACTCCCAGTaGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTT +
Preference number: 1 (lower is better)
Translates to: LPLVKATGSPPIHSQ*PACTWSFKPIQKDF
Trigger: AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTGGTGAACCTGTTGCCTTCACCAATGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 90 bp CCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTaGACTGATACAGCTTCTGGATGCCTTCTTCAAAATGGAAGAGTC +
Preference number: 1 (lower is better)
Translates to: PHPWFGDSRLSRRSH*TDTASGCLLQNGRV
Trigger: GACTCTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 90 bp ATCCAAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTaGTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCC +
Preference number: 1 (lower is better)
Translates to: IQKDFLPPMSQSHRM*CLENTVTRLPRYCS
Trigger: GGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 90 bp GGCAGCAGATGCCAAATGCCCTTCTCCCATGTGCTGTGCTTGCTTTaGTTGGAGGAATATGAAGGATGGCATTGTCCTCCTTTTGAGTCC +
Preference number: 1 (lower is better)
Translates to: GSRCQMPFSHVLCLL*LEEYEGWHCPPFES
Trigger: GGACTCAAAAGGAGGACAATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR GCA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATaGCTTCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGT +
Preference number: 1 (lower is better)
Translates to: SRLSRRSHCTDTASG*LLQNGRVPLIPECS
Trigger: ACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 90 bp TCTGGATGCCTTCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTaGAGTTCTTTGGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGT +
Preference number: 1 (lower is better)
Translates to: SGCLLQNGRVPLIPE*SSLEMRATGPVWGS
Trigger: ACTTCCCCAGACAGGACCAGTTGCCCTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCATCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 90 bp TTGTGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTaGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATA +
Preference number: 1 (lower is better)
Translates to: LWLTNDGYFGLPFVS*ETVILQFQGNYPMI
Trigger: TATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR TCA 90 bp CCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTACCAGAAGTGGTGGATaGGGAAGACCCTGGGGGCAG +
Preference number: 2 (lower is better)
Translates to: PGIVPCKLGQPHSRCLSATRSGG*GRPWGQ
Trigger: CTGCCCCCAGGGTCTTCCTCATCCACCACTTCTGGT...AGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR GCA 90 bp GCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGGCAGCAGATGCCAAATaGCCTTCTCCCATGTGCTGT +
Preference number: 2 (lower is better)
Translates to: AQVLFPASLGSRIPGAFLAADAK*PSPMCC
Trigger: ACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGC...CAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR CCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCGGAAATGAGGGCAACTaGTCCTGTCTGGGGAAGTGT +
Preference number: 2 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCGNEGN*SCLGKC
Trigger: ACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGCTGGTGCCACCCGGCTaGACAGGATTTGTCTTCCAC +
Preference number: 2 (lower is better)
Translates to: TFSHQCPRATACAAWRIQLVPPG*TGFVFH
Trigger: GTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAG...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR TCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTTGGTTGGAGGAATATaGAGGATGGCATTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCLVGGI*RMALSS
Trigger: GGAGGACAATGCCATCCTTCATATTCCTCCAACCAA...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR TCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGGCGATCCCATTGCACTaGTACAGCTTCTGGATGCCT +
Preference number: 2 (lower is better)
Translates to: TFSHQCPRATACAAWRIQAIPLH*YSFWMP
Trigger: AGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGC...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTCCACATCCTTGGTTTaGGGACTCCAGGCTTTCCAG +
Preference number: 2 (lower is better)
Translates to: TFSHQCPRATACAAWRIQSTSLV*GLQAFQ
Trigger: CTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGA...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CAA 90 bp CCTGGGGGCAGCAGATGCCAAATGCCCTTCTCCCATGTGCTGTGCTaGCTTTGGTTGGAGGAATATGAAGGATGGCATTGTCCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: PGGSRCQMPFSHVLC*LWLEEYEGWHCPPF
Trigger: AAAAGGAGGACAATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGCCCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR GCA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGACTGATGACTGCTAGCTaGATGGAAGATGGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: KRTFSHQCPRATACAAWRLMTAS*MEDGRG
Trigger: ACCTCTTCCATCTTCCATGCAGCTAGCAGTCATCAG...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR CCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCGCAACTGGTCCTGTCTaGGGAAGTGTGAGTCAGTTG +
Preference number: 2 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFATGPV*GSVSQL
Trigger: CAACTGACTCACACTTCCCCAGACAGGACCAGTTGC...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR TCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCTCCACCTTATCTGCTTaGGGCAGTTCTGCCACTTTG +
Preference number: 2 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFSTLSA*GSSATL
Trigger: CAAAGTGGCAGAACTGCCTCAAGCAGATAAGGTGGA...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR GCA 90 bp GTGTCTCCCCTGATGACTGCTAGCTGCATGGAAGATGGAAGAGGTCTTCTTTCCTTCTCCCATGTGCTGTaGTTGCTTTGGTTGGAGGAA +
Preference number: 2 (lower is better)
Translates to: VSPLMTASCMEDGRGLLSFSHVL*LLWLEE
Trigger: TTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAA...GGAAAGAAGACCTCTTCCATCTTCCATGCAGCTAGCAGTCATCAGGGGAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR GCA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTGGATTCCACCTTATCTaGTTGAGGCAGTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: CCLENTVTRLPRYCSLQAGFHLI*LRQFCH
Trigger: GTGGCAGAACTGCCTCAAGCAGATAAGGTGGAATCC...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR GCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGGATACAGCTTCTGGATaGCTTCTTCAAAATGGAAGA +
Preference number: 2 (lower is better)
Translates to: TFSHQCPRATACAAWRIQDTASG*LLQNGR
Trigger: TCTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATC...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCTTCCTTTTGTGAGTTaGGAAACTGTCATCCTCCAG +
Preference number: 2 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFLPFVS*ETVILQ
Trigger: CTGGAGGATGACAGTTTCCCAACTCACAAAAGGAAG...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CAA 90 bp AGCAGATGCCAAATGCCCTTCTCCCATGTGCTGTGCTTGCTTTGGTaGGAGGAATATGAAGGATGGCATTGTCCTCCTTTTGAGTCCAAA +
Preference number: 2 (lower is better)
Translates to: SRCQMPFSHVLCLLW*EEYEGWHCPPFESK
Trigger: TTTGGACTCAAAAGGAGGACAATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR GCA 90 bp CCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTCAAAATGGAACTTTGTGCCAAGAACTaGATTCACAGGGGAGTTCAG +
Preference number: 2 (lower is better)
Translates to: PGDPIALIQLLDAFFKMELCAKN*IHRGVQ
Trigger: CTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAG...TTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR CAA 90 bp CTTCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTaGGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LLQNGRVPLIPECSS*EMRATGPVWGSVSQ
Trigger: CTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CAA 90 bp AGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTTaGAACCAAAACACAGCTCTTTCCAAGCTTGGAGCGTTGAGAGGG +
Preference number: 2 (lower is better)
Translates to: RFGSPTVFCLPFPLS*NQNTALSKLGALRG
Trigger: CCCTCTCAACGCTCCAAGCTTGGAAAGAGCTGTGTTTTGGTTCAAAGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR GCA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGCTTGAGGCAGTTCTaGCACTTTGATTGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: CCLENTVTRLPRYCSLQACLRQF*HFDCLL
Trigger: CAAAAGACAATCAAAGTGGCAGAACTGCCTCAAGCA...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CCA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAATTTGATTGTCTTTTGTaGCTGACTAATGATGGATAC +
Preference number: 2 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKFDCLL*LTNDGY
Trigger: GTATCCATCATTAGTCAGCCACAAAAGACAATCAAA...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CAA 90 bp GGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTaGCCATTTCCCTTGTCTTTGAACCAAAACACAGCTCTTTCCAAG +
Preference number: 2 (lower is better)
Translates to: GTHIIMRFGSPTVFC*PFPLSLNQNTALSK
Trigger: CTTGGAAAGAGCTGTGTTTTGGTTCAAAGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR TCA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTGTCCTAAGCTTCCTTTaGGAAAGATCTGTAGAATCA +
Preference number: 2 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSVLSFL*ERSVES
Trigger: TGATTCTACAGATCTTTCTCAAAGGAAGCTTAGGAC...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR TCA 90 bp TTTTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGATTGTCTTTTGTGGCTaGCTAATGATGGATACTTTG +
Preference number: 2 (lower is better)
Translates to: FSGTHIIMRFGSPTVFCLIVFCG*LMMDTL
Trigger: CAAAGTATCCATCATTAGTCAGCCACAAAAGACAAT...CAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR TCA 72 bp GCTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTaGAGGCAACAGGTTCACCACCGATCCACTCCCAGT +
Preference number: 3 (lower is better)
Translates to: AWSVERALFSHW*RQQVHHRSTPS
Trigger: ACTGGGAGTGGATCGGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CAA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAATTGTTCCCTGCAAGCTaGGGCAGCCGCATTCCAGGT +
Preference number: 3 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKLFPAS*GSRIPG
Trigger: ACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAA...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR TCA 72 bp GCCTTTCTGCTCTGTGATCAAGATGTGACAGTAGCCTaGGTGCTGGTGCCACCCGGCTGGACAGGATTTGTC +
Preference number: 3 (lower is better)
Translates to: AFLLCDQDVTVA*VLVPPGWTGFV
Trigger: GACAAATCCTGTCCAGCCGGGTGGCACCAGCACTCAGGCTACTGTCACATCTTGATCACAGAGCAGAAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 72 bp GACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTaGTGCCTGGAGAATACAGTTACAAGGTTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: DFLPPMSQSHRM*CLENTVTRLPR
Trigger: CCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 72 bp GTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTaGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: VTRLPRYCSLQA*AAAFQVPFCSV
Trigger: CACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CAA 90 bp CTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTGATGGACGAACTGTTTaGCCATTCCCACGGGTCCTA +
Preference number: 3 (lower is better)
Translates to: LSPTNVPEPPHVLPGEYSDGRTV*PFPRVL
Trigger: TAGGACCCGTGGGAATGGCAAAACAGTTCGTCCATC...ACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR CCA 72 bp GAAGAGGTCTTCTTTCCAGATGAAAGGAACCAGAAGTaGTGGATGAGGAAGACCCTGGGGGCAGCAGATGCC +
Preference number: 3 (lower is better)
Translates to: EEVFFPDERNQK*WMRKTLGAADA
Trigger: GGCATCTGCTGCCCCCAGGGTCTTCCTCATCCACCACTTCTGGTTCCTTTCATCTGGAAAGAAGACCTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR CCA 72 bp GTGAAGGCAACAGGTTCACCACCGATCCACTCCCAGTaGCCAGCATGCACTTGGTCGTTCAAACCTATCCAA +
Preference number: 3 (lower is better)
Translates to: VKATGSPPIHSQ*PACTWSFKPIQ
Trigger: TTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTGGTGAACCTGTTGCCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CAA 90 bp GTGCCACCCGGCTGGACAGGATTTGTCTTCCACATCCTTGGTTTGGGGACTCCAGGAAGTGTGAGTCAGTaGTGGATTCCACCTTATCTG +
Preference number: 3 (lower is better)
Translates to: VPPGWTGFVFHILGLGTPGSVSQ*WIPPYL
Trigger: CAGATAAGGTGGAATCCACAACTGACTCACACTTCC...TGGAGTCCCCAAACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 72 bp TTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTaGCTGGAGAATACAGTTACAAGGTTGCCCAGGTAT +
Preference number: 3 (lower is better)
Translates to: FLPPMSQSHRMC*LENTVTRLPRY
Trigger: ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 72 bp GCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTaGATTCCACCTTATCTGCTTGAGGCAGTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: ATGPVWGSVSQL*IPPYLLEAVLP
Trigger: TGGCAGAACTGCCTCAAGCAGATAAGGTGGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 72 bp TCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTaGAGAATACAGTTACAAGGTTGCCCAGGTATTGTT +
Preference number: 3 (lower is better)
Translates to: SHQCPRATACAA*RIQLQGCPGIV
Trigger: AACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 72 bp TCACCACCGATCCACTCCCAGTGGCCAGCATGCACTTaGTCGTTCAAACCTATCCAAAAGGACTTTCTCCCA +
Preference number: 3 (lower is better)
Translates to: SPPIHSQWPACT*SFKPIQKDFLP
Trigger: TGGGAGAAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR-3UTR CAA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCTTTTCACTGCAGCTTTaGTCTTTGTGCCAAGAACTG +
Preference number: 3 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTFSLQL*SLCQEL
Trigger: CAGTTCTTGGCACAAAGACAAAAGCTGCAGTGAAAA...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR CAA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCAGAGTGCAGTTCTTaGGAAATGAGGGCAACTGGT +
Preference number: 3 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFPECSS*EMRATG
Trigger: ACCAGTTGCCCTCATTTCCAAAGAACTGCACTCTGG...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR TCA 72 bp TGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTaGTACAGCTTCTGGATGCCTTCTTCAAAATGGAAG +
Preference number: 3 (lower is better)
Translates to: WGLQAFQAIPLH*YSFWMPSSKWK
Trigger: CTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 72 bp GGCAGCAGATGCCAAATGCCCTTCTCCCATGTGCTGTaGTTGCTTTGGTTGGAGGAATATGAAGGATGGCAT +
Preference number: 3 (lower is better)
Translates to: GSRCQMPFSHVL*LLWLEEYEGWH
Trigger: ATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR GCA 72 bp ACAGGTTCACCACCGATCCACTCCCAGTGGCCAGCATaGACTTGGTCGTTCAAACCTATCCAAAAGGACTTT +
Preference number: 3 (lower is better)
Translates to: TGSPPIHSQWPA*TWSFKPIQKDF
Trigger: AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTGGTGAACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 72 bp TGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTaGACTGATACAGCTTCTGGATGCCTTCTTCAAAAT +
Preference number: 3 (lower is better)
Translates to: WFGDSRLSRRSH*TDTASGCLLQN
Trigger: ATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 72 bp TGCCAAATGCCCTTCTCCCATGTGCTGTGCTTGCTTTaGTTGGAGGAATATGAAGGATGGCATTGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: CQMPFSHVLCLL*LEEYEGWHCPP
Trigger: AGGAGGACAATGCCATCCTTCATATTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCATTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR-3UTR CAA 90 bp TTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCTTCCACATCCTTGGTTaGGGGACTCCAGGCTTTCCA +
Preference number: 3 (lower is better)
Translates to: FWNTHNYEVWLSYSLLFAFHILG*GTPGFP
Trigger: TGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAA...GGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 72 bp TCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATaGCTTCTTCAAAATGGAAGAGTCCCTTTAATTCCA +
Preference number: 3 (lower is better)
Translates to: SRRSHCTDTASG*LLQNGRVPLIP
Trigger: TGGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR GCA 72 bp AGTTGTGGATTCCACCTTATCTGCTTGAGGCAGTTCTaGCACTTTGATTGTCTTTTGTGGCTGACTAATGAT +
Preference number: 3 (lower is better)
Translates to: SCGFHLICLRQF*HFDCLLWLTND
Trigger: ATCATTAGTCAGCCACAAAAGACAATCAAAGTGGCAGAACTGCCTCAAGCAGATAAGGTGGAATCCACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CCA 72 bp ACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTaGGAAACTGTCATCCTCCAGTTTCAAGGAAACTAT +
Preference number: 3 (lower is better)
Translates to: TNDGYFGLPFVS*ETVILQFQGNY
Trigger: ATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCGATGTGACAGTAGCCTaGGTGCTGGTGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCDVTVA*VLVPPG
Trigger: GCCGGGTGGCACCAGCACTCAGGCTACTGTCACATC...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp CCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTGATGTGACAGTAGCCTaGGTGCTGGTGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: PGIVPCKLGQPHSRCLSADVTVA*VLVPPG
Trigger: GCCGGGTGGCACCAGCACTCAGGCTACTGTCACATC...AGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCCTGGTGCCACCCGGCTaGACAGGATTTGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTLVPPG*TGFVFH
Trigger: GTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAG...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCCCGATCCACTCCCAGTaGCCAGCATGCACTTGGTCG +
Preference number: 4 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTPIHSQ*PACTWS
Trigger: CGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGG...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTTCCCCGAGAACCATCTaGCCATGGGCTGGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: VLFPASLGSRIPGAFLLCSPRTI*PWAGSR
Trigger: TCGGCTGCCAGCCCATGGCCAGATGGTTCTCGGGGA...ACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TCTTCCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACACCAGAAGTGGTGGATaGGGAAGACCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSTSLVWGLQAFQAIPLHTRSGG*GRPWGQ
Trigger: CTGCCCCCAGGGTCTTCCTCATCCACCACTTCTGGT...GTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp GTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTCCAAGCTTGGAGCGTTaGGAGGGCCCTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VLFPASLGSRIPGAFLLCPSLER*EGPLLP
Trigger: TGGGAGAAGAGGGCCCTCTCAACGCTCCAAGCTTGG...ACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp TTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAAGCTCCACCCTTCCGTaGAGAGGCAATTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: FPASLGSRIPGAFLLCDQSSTLP*RGNSRR
Trigger: CCTGCGGGAATTGCCTCTGCACGGAAGGGTGGAGCT...TTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCGTGACAAACTCCAGGTaGCCCCCTGTAGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCVTNSR*PPVGSV
Trigger: AACAGACCCTACAGGGGGCCACCTGGAGTTTGTCAC...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCCCAAGCTTGGAGCGTTaGGAGGGCCCTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSPSLER*EGPLLP
Trigger: TGGGAGAAGAGGGCCCTCTCAACGCTCCAAGCTTGG...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCGCAGCAGATGCCAAATaGCCTTCTCCCATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCAADAK*PSPMCC
Trigger: ACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGC...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCCCAGGTATTGTTCCCTaGAAGCTTGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTPGIVP*KLGQPH
Trigger: ATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCCCAGTGGCCAGCATaGACTTGGTCGTTCAAACCT +
Preference number: 4 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCSQWPA*TWSFKP
Trigger: AGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGA...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCTGGATCAGGATGGTCTaGCCCTCCTCCAGTTCAATC +
Preference number: 4 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTWIRMV*PSSSSI
Trigger: GATTGAACTGGAGGAGGGGCAGACCATCCTGATCCA...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGCATCTGGCCATGGGCTaGCAGCCGAGTTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PIHSQWPACTWSFKPIQKHLAMG*QPSSRS
Trigger: ACTGCGAGAACTCGGCTGCCAGCCCATGGCCAGATG...CTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TCTTCCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACAGAACCATCTGGCCATaGGCTGGCAGCCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SSTSLVWGLQAFQAIPLHRTIWP*AGSRVL
Trigger: GAGAACTCGGCTGCCAGCCCATGGCCAGATGGTTCT...GTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATAGCTTTGCAAACTTCCTaGGCGCCAAGCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: RTFSHQCPRATACAAWRIALQTS*APSLRT
Trigger: AGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGC...TATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAACTGGCGTCCACATCTaGAGCTCGCAGCATGGATCC +
Preference number: 4 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKTGVHI*SSQHGS
Trigger: GGATCCATGCTGCGAGCTTCAGATGTGGACGCCAGT...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCCCTGGCTTCTTCATaGTCTCCCCAGCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PHVLPGEYSYKVAQVLFPALASS*SPQPVE
Trigger: CTCCACAGGCTGGGGAGATCATGAAGAAGCCAGGGC...AGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATAGGTGCATGTTTCTGGTaGGGGTTGGCTGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: RTFSHQCPRATACAAWRIGACFW*GLAGCL
Trigger: TAAGCAGCCAGCCAACCCTCACCAGAAACATGCACC...TATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCGGATTCCACCTTATCTaGTTGAGGCAGTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCGFHLI*LRQFCH
Trigger: GTGGCAGAACTGCCTCAAGCAGATAAGGTGGAATCC...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp AGTGCTGGTGCCACCCGGCTGGACAGGATTTGTCTTCCACATCCTTGGTTTGGGCAGAGCCACCGCATGTaGTGCCTGGAGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: SAGATRLDRICLPHPWFGQSHRM*CLENTV
Trigger: AACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG...CCCAAACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCCAGCTGCTGCAGCTTTaGAAACTTCCTGAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTQLLQL*KLPERQ
Trigger: TTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTG...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TATCCAAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTCTGGTGCCACCCGGCTaGACAGGATTTGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: YPKGLSPTNVPEPPHVLPLVPPG*TGFVFH
Trigger: GTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAG...AGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACGCAGCATGGATCCCTaGATCAGGATGGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DPLPVASMHLVVQTYPKGRSMDP*IRMVCP
Trigger: GGGGCAGACCATCCTGATCCAGGGATCCATGCTGCG...TCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp GTGCCACCCGGCTGGACAGGATTTGTCTTCCACATCCTTGGTTTGGGGACTCCATCCAGGAGCCTCTTTTaGAAGCTGGTCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: VPPGWTGFVFHILGLGTPSRSLF*KLVIHW
Trigger: CCAGTGGATGACCAGCTTCCAAAAGAGGCTCCTGGA...TGGAGTCCCCAAACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCGAACTGGTCGGCAGTTaGTTCTATCCTCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCELVGS*FYPQMP
Trigger: AGGCATCTGAGGATAGAACCAACTGCCGACCAGTTC...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGTCAACACGCGGGAAGTaGTGTAAATCCCGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: YCSLQAWAAAFQVPFCSVSTRGK*CKSRSS
Trigger: GCTGCTACGGGATTTACATCACTTCCCGCGTGTTGA...CACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCTCAGTGTCAGGGTCTaGTGCCTTCAACACGCGGGA +
Preference number: 4 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFLSVRV*CLQHAG
Trigger: TCCCGCGTGTTGAAGGCATCAGACCCTGACACTGAG...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp GTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTCTGTCTGGGGAAGTGTaGGTCAGTTGTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: VLFPASLGSRIPGAFLLCLSGEV*VSCGFH
Trigger: GTGGAATCCACAACTGACTCACACTTCCCCAGACAG...ACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp TATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGCTCTTCTCCCATTGGTaGAGGCAACAGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: YCSLQAWAAAFQVPFCSVLFSHW*RQQVHH
Trigger: GTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAG...CACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp TCTTCCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTCAGAGAGTTCATGCTaGCAGGGCCCAACTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSTSLVWGLQAFQAIPLHSESSC*QGPTLL
Trigger: GAGAAGAGTTGGGCCCTGTCAGCATGAACTCTCTGA...GTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp GCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGACTGGAAAGGACGCATaGAGTGGAACAGATGGATTG +
Preference number: 4 (lower is better)
Translates to: AQVLFPASLGSRIPGAFLTGKDA*SGTDGL
Trigger: CAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGT...CAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATTGCCCTTCTCCCATGTaGTGTGCTTGCTTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KDFLPPMSQSHRMCCLENCPSPM*CACFGW
Trigger: CCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCA...ATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCTCCAGGCGATCCCATTaGACTGATACAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTSRRSH*TDTASG
Trigger: TCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGA...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp GTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGGGGTCCTGACAATGTaGCCCGAGATCTTAACATGC +
Preference number: 4 (lower is better)
Translates to: VLFPASLGSRIPGAFLLCGVLTM*PEILTC
Trigger: GCATGTTAAGATCTCGGGGCACATTGTCAGGACCCC...ACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp TCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAGTTTGGACCTCCTGACTaGCAAGGACTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLQAWAAAFQVPFCSVIKFGPPD*QGLIQH
Trigger: ATGCTGGATGAGTCCTTGGCAGTCAGGAGGTCCAAA...CTTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR CCA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATAGCAACTGGTCCTGTCTaGGGAAGTGTGAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: RTFSHQCPRATACAAWRIATGPV*GSVSQL
Trigger: CAACTGACTCACACTTCCCCAGACAGGACCAGTTGC...TATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp AGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTTCCACATCCTTGGTTTaGGGACTCCAGGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: RYCSLQAWAAAFQVPFCSSTSLV*GLQAFQ
Trigger: CTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGA...AGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCGTTCTGATGGAGATGTaGACTGTCATAGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTVLMEM*TVIGAL
Trigger: GAGTGCACCTATGACAGTCCACATCTCCATCAGAAC...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCGAACAACTCCAGCCTaGAGGTCAGCCACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFRTTPA*RSATVK
Trigger: CTTCACCGTGGCTGACCTCCAGGCTGGAGTTGTTCG...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TATCCAAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTCTGAAGCTCGCAGCATaGATCCCTGGATCAGGATGG +
Preference number: 4 (lower is better)
Translates to: YPKGLSPTNVPEPPHVLPLKLAA*IPGSGW
Trigger: CCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAG...AGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTACGTACACCGTGAACTaGTCGGCAGTTGGTTCTATC +
Preference number: 4 (lower is better)
Translates to: PGIVPCKLGQPHSRCLSATYTVN*SAVGSI
Trigger: GATAGAACCAACTGCCGACCAGTTCACGGTGTACGT...AGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAGAGGAGGCCATGGCGTaGCTTTTGAGTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: KRTFSHQCPRATACAAWREEAMA*LLSDAE
Trigger: TTCAGCATCACTCAAAAGCCACGCCATGGCCTCCTC...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR CAA 72 bp AGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTaGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SYKVAQVLFPAS*GSRIPGAFLLC
Trigger: ACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp CCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCAGCTGACACTTGGTTaGCCTTTATACCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: PGIVPCKLGQPHSRCLSAQLTLG*PLYPQR
Trigger: CCTTTGTGGGTATAAAGGTCAACCAAGTGTCAGCTG...AGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp TCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAGGCAGTTCTGCCACTTTaGTTGTCTTTTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLQAWAAAFQVPFCSVIKAVLPL*LSFVAD
Trigger: GTCAGCCACAAAAGACAATCAAAGTGGCAGAACTGC...CTTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCGCGATCCCATTGCACTaGTACAGCTTCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSAIPLH*YSFWMP
Trigger: AGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGC...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp CATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACACTCTTCTCCCATTGGTaGAGGCAACAGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: HPWFGDSRLSRRSHCTDTLFSHW*RQQVHH
Trigger: GTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAG...TGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp CAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTCGGAATTCCAGCTCTaGTATAGACAGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: QSHRMCCLENTVTRLPRYSEFQL*YRQAAT
Trigger: CGTGGCTGCCTGTCTATATCAGAGCTGGAATTCCGA...ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATAAACGCCTCAGGAACTTaGTTGTCCACTGGGAGGATT +
Preference number: 4 (lower is better)
Translates to: RTFSHQCPRATACAAWRINASGT*LSTGRI
Trigger: AATCCTCCCAGTGGACAATCAAGTTCCTGAGGCGTT...TATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp GTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGTGCTGATGATGCTTTaGCCTCCCTCAGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: VLFPASLGSRIPGAFLLCVLMML*PPSVTF
Trigger: GAAAGTGACTGAGGGAGGTCAAAGCATCATCAGCAC...ACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGCTGGTGGCTCATCGTTaGCAGGGAATACCTCAACAT +
Preference number: 4 (lower is better)
Translates to: TFSHQCPRATACAAWRIQLVAHR*QGIPQH
Trigger: ATGTTGAGGTATTCCCTGTCAACGATGAGCCACCAG...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATAACAGTAAGGGCTGTTaGGCAGCCCTCATCTACAAC +
Preference number: 4 (lower is better)
Translates to: KDFLPPMSQSHRMCCLENNSKGC*AALIYN
Trigger: GTTGTAGATGAGGGCTGCTCAACAGCCCTTACTGTT...ATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTGGTATCTCCAAGGAGTaGTGCTTCCCATCTGTGACG +
Preference number: 4 (lower is better)
Translates to: HQCPRATACAAWRIQLQGGISKE*CFPSVT
Trigger: CGTCACAGATGGGAAGCATCACTCCTTGGAGATACC...ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp GATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACCATGGCGTGGCTTTTaGGTGATGCTGAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: DPLPVASMHLVVQTYPKGPWRGF*VMLNSR
Trigger: CCTGCTGTTCAGCATCACTCAAAAGCCACGCCATGG...TCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTAGCCACCGCATGTGCTaGCTGGAGAATACAGTTACA +
Preference number: 4 (lower is better)
Translates to: LSPTNVPEPPHVLPGEYSSHRMC*LENTVT
Trigger: TGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCT...ACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCAAAGGAGGGCTTCTGTaGTTCCTCCTGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFKGGLL*FLLEGQ
Trigger: CTGACCCTCCAGGAGGAAGCACAGAAGCCCTCCTTT...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AGTGCTGGTGCCACCCGGCTGGACAGGATTTGTCTTCCACATCCTTGGTTTGGGTGGACACTTCAGTTTTaGTCTCAGTTGGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: SAGATRLDRICLPHPWFGWTLQF*SQLGLW
Trigger: CCAGAGTCCCAACTGAGAGCAAAACTGAAGTGTCCA...CCCAAACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGATCCTTGACAACCAAATaGCGAGAAACTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KRTFSHQCPRATACAAWRSLTTK*RETPGA
Trigger: GGCTCCTGGAGTTTCTCGGCATTTGGTTGTCAAGGA...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAGAAAGGAACCAGAAGTaGTGGATGAGGAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: KRTFSHQCPRATACAAWRERNQK*WMRKTL
Trigger: CAGGGTCTTCCTCATCCACCACTTCTGGTTCCTTTC...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAATCCACATCCTTGGTTTaGGGACTCCAGGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKSTSLV*GLQAFQ
Trigger: CTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGA...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGTTCCCTGCAAGCTTaGGCAGCCGCATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CCLENTVTRLPRYCSLQACSLQA*AAAFQV
Trigger: CACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACA...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
3UTR CAA 72 bp TTCACCACCGATCCACTCCCAGTGGCCAGCATGCACTaGGTCGTTCAAACCTATCCAAAAGGACTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: FTTDPLPVASMH*VVQTYPKGLSP
Trigger: GGGAGAAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp CATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACATCCACCTTATCTGCTTaGGGCAGTTCTGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: HPWFGDSRLSRRSHCTDTSTLSA*GSSATL
Trigger: CAAAGTGGCAGAACTGCCTCAAGCAGATAAGGTGGA...TGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp GGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGATAATCAATGTTGGGTaGAGGGGGATCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: GLGTPGFPGDPIALIQLLIINVG*RGIQML
Trigger: CAGCATCTGGATCCCCCTTCACCCAACATTGATTAT...CAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATTTCACAGTCCAGAACTaGTGTAGTCAAGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KDFLPPMSQSHRMCCLENFTVQN*CSQGGQ
Trigger: CTGACCTCCTTGACTACATCAGTTCTGGACTGTGAA...ATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTGAAACTGTTCCCAAGTaGTGGCTCGAGACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFETVPK*WLETAP
Trigger: AGGGGCAGTCTCGAGCCATCACTTGGGAACAGTTTC...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATCTTTGGGCAAGACGTTaGTGGGGAATTTGTGACGGA +
Preference number: 4 (lower is better)
Translates to: QSHRMCCLENTVTRLPRYLWARR*WGICDG
Trigger: TCCGTCACAAATTCCCCATCAACGTCTTGCCCAAAG...ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTCTTTCAGAGGGTTGGTaGACGCCTCAGGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: HQCPRATACAAWRIQLQGLSEGW*TPQELD
Trigger: ATCAAGTTCCTGAGGCGTTCACCAACCCTCTGAAAG...ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAGTATGTCACGGCCTCTaGGATAACATCTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: FPASLGSRIPGAFLLCDQVCHGL*DNISLR
Trigger: TCTCAGAGAGATGTTATCTCAGAGGCCGTGACATAC...TTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGACTTTGTGCCAAGAACTaGATTCACAGGGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: KRTFSHQCPRATACAAWRLCAKN*IHRGVQ
Trigger: CTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAG...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAATCCAGGCGATCCCATTaGACTGATACAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKSRRSH*TDTASG
Trigger: TCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGA...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp CCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGTGTCTTCCACATCCTTaGTTTGGGGACTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PIHSQWPACTWSFKPIQKCLPHP*FGDSRL
Trigger: AAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGACA...CTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp CCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTCAAAATGGAATGTTCCCTGCAAGCTTaGGCAGCCGCATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PGDPIALIQLLDAFFKMECSLQA*AAAFQV
Trigger: CACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACA...TTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGACCGCATGTGCTGCCTaGAGAATACAGTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: GLGTPGFPGDPIALIQLLTACAA*RIQLQG
Trigger: ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGT...CAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGTGGCCAGCATGCACTTaGTCGTTCAAACCTATCCAA +
Preference number: 4 (lower is better)
Translates to: GLGTPGFPGDPIALIQLLWPACT*SFKPIQ
Trigger: TTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCA...CAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAGGTACAGCTCCCACCTaGACACTTCAGTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKGTAPT*TLQFCS
Trigger: AGAGCAAAACTGAAGTGTCCAGGTGGGAGCTGTACC...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGAGAATGGCTGCTGTTTaGTGGCTGATAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: PIHSQWPACTWSFKPIQKRMAAV*WLIGDL
Trigger: CAGATCGCCTATCAGCCACCAAACAGCAGCCATTCT...CTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTATAGCCTATCAGTCCTaGCCCTGGCTTCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: LSPTNVPEPPHVLPGEYSIAYQS*PWLLHD
Trigger: ATCATGAAGAAGCCAGGGCCAGGACTGATAGGCTAT...ACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATTCCACTGGAGTTATATaGATTGTTGCCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: KDFLPPMSQSHRMCCLENSTGVI*IVATCG
Trigger: GCCACAGGTGGCAACAATCCATATAACTCCAGTGGA...ATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGGACATCTCTGCAATaGGGACCAATGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: LQGCPGIVPCKLGQPHSRWTSLQ*GPMSCM
Trigger: CATGCAAGACATTGGTCCCCATTGCAGAGATGTCCA...CCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCATGAAGTGGAACAGATaGATTGGGTCCATTGTAGCA +
Preference number: 4 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTMKWNR*IGSIVA
Trigger: TGCTACAATGGACCCAATCCATCTGTTCCACTTCAT...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCGCAATGGAAGGTGGCTaGTTGTCTACTGGGTATACC +
Preference number: 4 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSAMEGG*LSTGYT
Trigger: GGTATACCCAGTAGACAACCAGCCACCTTCCATTGC...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAGTGGGGTCCATGATTTaGAATTCCACGGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: FPASLGSRIPGAFLLCDQVGSMI*NSTVSE
Trigger: TTCAGATACCGTGGAATTTCAAATCATGGACCCCAC...TTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp CAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTTGGTTGGAGGAATATaGAGGATGGCATTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSHRMCCLENTVTRLPRYLVGGI*RMALSS
Trigger: GGAGGACAATGCCATCCTTCATATTCCTCCAACCAA...ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTGCGATCCCATTGCACTaGTACAGCTTCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: CCLENTVTRLPRYCSLQAAIPLH*YSFWMP
Trigger: AGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGC...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCCATTTCCCTTGTCTTTaGACCAAAACACAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTHFPCL*TKTQLF
Trigger: AAAGAGCTGTGTTTTGGTTCAAAGACAAGGGAAATG...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp TTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAGAGGTCAGGATGAACTaGTCCACTTCCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: FPASLGSRIPGAFLLCDQEVRMN*STSRIN
Trigger: GTTTATTCTGGAAGTGGATCAGTTCATCCTGACCTC...TTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TCTTCCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTCCAGCTCTTTCATCTaGCCCTCACACACAGTAATA +
Preference number: 4 (lower is better)
Translates to: SSTSLVWGLQAFQAIPLHSSSFI*PSHTVI
Trigger: TATTACTGTGTGTGAGGGTCAGATGAAAGAGCTGGA...GTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATATCAGCAAGGCTCTCTaGGTCATCATGCATGTACGT +
Preference number: 4 (lower is better)
Translates to: QSHRMCCLENTVTRLPRYISKAL*VIMHVR
Trigger: ACGTACATGCATGATGACTCAGAGAGCCTTGCTGAT...ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACACTGATGACTGCTAGCTaGATGGAAGATGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: HPWFGDSRLSRRSHCTDTLMTAS*MEDGRG
Trigger: ACCTCTTCCATCTTCCATGCAGCTAGCAGTCATCAG...TGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp GGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGATACAGTTACAAGGTTaGCCAGGTATTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGTPGFPGDPIALIQLLIQLQG*PGIVPC
Trigger: GCAGGGAACAATACCTGGGCAACCTTGTAACTGTAT...CAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp AGTGCTGGTGCCACCCGGCTGGACAGGATTTGTCTTCCACATCCTTGGTTTGGGAATGGGCTTCCCAAGTaGTTTTCTAATCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: SAGATRLDRICLPHPWFGNGLPK*FSNQVV
Trigger: CACTACCTGATTAGAAAAGCACTTGGGAAGCCCATT...CCCAAACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AACTCCAGGTGGCCCCCTGTAGGGTCTGTTATATTTAGAGTTTTCTGGAACACAGTCAGCCATCCATGCTaGAGGCCACCAACGGTGACT +
Preference number: 4 (lower is better)
Translates to: NSRWPPVGSVIFRVFWNTVSHPC*RPPTVT
Trigger: AGTCACCGTTGGTGGCCTGCAGCATGGATGGCTGAC...TGTGTTCCAGAAAACTCTAAATATAACAGACCCTACAGGGGGCCACCTGGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTAAAGCAGATCCCATaGAAAGTACCGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: TFSHQCPRATACAAWRIQLKQIP*KVPPCW
Trigger: CCAACATGGCGGTACTTTGCATGGGATCTGCTTTAA...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATCTTCCTTTTGTGAGTTaGGAAACTGTCATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KDFLPPMSQSHRMCCLENLPFVS*ETVILQ
Trigger: CTGGAGGATGACAGTTTCCCAACTCACAAAAGGAAG...ATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp AGTGCTGGTGCCACCCGGCTGGACAGGATTTGTCTTCCACATCCTTGGTTTGGGAGTGTGAGTCAGTTGTaGATTCCACCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: SAGATRLDRICLPHPWFGSVSQL*IPPYLL
Trigger: AAGCAGATAAGGTGGAATCCACAACTGACTCACACT...CCCAAACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GTGTCTCCCCTGATGACTGCTAGCTGCATGGAAGATGGAAGAGGTCTTCTTTCCCGGGACCTATTGCAATaGAAGGTGGCTGGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: VSPLMTASCMEDGRGLLSRDLLQ*KVAGCL
Trigger: TAGACAACCAGCCACCTTCCATTGCAATAGGTCCCG...GGAAAGAAGACCTCTTCCATCTTCCATGCAGCTAGCAGTCATCAGGGGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTTGTGACCATTCAATATaGGACCACTTCAGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PGIVPCKLGQPHSRCLSACDHSI*DHFSSK
Trigger: TTTGGAACTGAAGTGGTCTCATATTGAATGGTCACA...AGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp ACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCATCCTCCAGGGTGAGGGGTCCTaGCAATGTGCCCCGAGATCT +
Preference number: 4 (lower is better)
Translates to: TNDGYFGLPFVSWETVILQGEGS*QCAPRS
Trigger: AGATCTCGGGGCACATTGTCAGGACCCCTCACCCTG...GAGGATGACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AACTCCAGGTGGCCCCCTGTAGGGTCTGTTATATTTAGAGTTTTCTGGAACACACAAAGACCTGTGGAGTaGGTTTCCCAACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NSRWPPVGSVIFRVFWNTQRPVE*VSQPSG
Trigger: CCCAGAGGGTTGGGAAACTCACTCCACAGGTCTTTG...TGTGTTCCAGAAAACTCTAAATATAACAGACCCTACAGGGGGCCACCTGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp GATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGATCAAGGAGGTCAGGATaGACTGATCCACTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DPLPVASMHLVVQTYPKGSRRSG*TDPLPE
Trigger: TTCTGGAAGTGGATCAGTTCATCCTGACCTCCTTGA...TCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCGCAGGCCACCAACGGTaGCTAGCCGGACAGCACCAA +
Preference number: 4 (lower is better)
Translates to: FWNTHNYEVWLSYSLLFAAGHQR*LAGQHQ
Trigger: TTGGTGCTGTCCGGCTAGTCACCGTTGGTGGCCTGC...GGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TCTTCCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACGAACCTGGGTCAAACTaGATCAGTTTAGATGGAATC +
Preference number: 4 (lower is better)
Translates to: SSTSLVWGLQAFQAIPLHEPGSN*ISLDGI
Trigger: GATTCCATCTAAACTGATTCAGTTTGACCCAGGTTC...GTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR GCA 90 bp GATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACCCATGTGCTGTGCTTaGTTTGGTTGGAGGAATATG +
Preference number: 4 (lower is better)
Translates to: DPLPVASMHLVVQTYPKGPMCCA*FGWRNM
Trigger: CATATTCCTCCAACCAAAGCAAGCACAGCACATGGG...TCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTGGATTCCACCTTATCTaGTTGAGGCAGTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFGFHLI*LRQFCH
Trigger: GTGGCAGAACTGCCTCAAGCAGATAAGGTGGAATCC...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp TCTTCCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACCCCGAGATCTTAACATaGCCCTTTCATTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SSTSLVWGLQAFQAIPLHPEILT*PFHFKV
Trigger: GACTTTGAAATGAAAGGGGCATGTTAAGATCTCGGG...GTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCAAACACGGGACCTATTaGAATGGAAGGTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFKHGTY*NGRWLV
Trigger: AACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTT...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGAGCCCGACCTCCCTaGCGGACAGCCACCGCTAGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRARPP*RTATAS
Trigger: GCTAGCGGTGGCTGTCCGCCAGGGAGGTCGGGCTCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CCA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTAGACCACGAAGTCTTTaGTGGAGTCGCTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: SRLSRRSHCTDTASGCLLRPRSL*WSRCHH
Trigger: ATGATGACAGCGACTCCACCAAAGACTTCGTGGTCT...AAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTAGATGTAGTCATCACTaGCGTCCACATCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SRLSRRSHCTDTASGCLLRCSHH*RPHLKL
Trigger: GAGCTTCAGATGTGGACGCCAGTGATGACTACATCT...AAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAAAGCTGGTCATCCACTaGAGTTATATGGATTGTTGC +
Preference number: 4 (lower is better)
Translates to: KRTFSHQCPRATACAAWRKLVIH*SYMDCC
Trigger: GCAACAATCCATATAACTCCAGTGGATGACCAGCTT...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTTGGCTGGTTGTCTACTaGGTATACCGTGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: SRLSRRSHCTDTASGCLLWLVVY*VYRDVE
Trigger: CTCAACATCACGGTATACCCAGTAGACAACCAGCCA...AAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTGAGGATGGACGAACCTaGGTCAAACTGAATCAGTTT +
Preference number: 4 (lower is better)
Translates to: HQCPRATACAAWRIQLQGEDGRT*VKLNQF
Trigger: AAACTGATTCAGTTTGACCCAGGTTCGTCCATCCTC...ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR CCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTCTATAAACAGAGGATaGACGAACCTGGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: TFSHQCPRATACAAWRIQSINRG*TNLGQT
Trigger: AGTTTGACCCAGGTTCGTCCATCCTCTGTTTATAGA...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp CAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTTTTCCAACTGCAGCTaGCACTTGGTTGACCTTTAT +
Preference number: 4 (lower is better)
Translates to: QSHRMCCLENTVTRLPRYFSNCS*HLVDLY
Trigger: ATAAAGGTCAACCAAGTGTCAGCTGCAGTTGGAAAA...ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGCATTGTGAACATACTTaGCTTCGTTGGGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TFSHQCPRATACAAWRIQHCEHT*LRWEGN
Trigger: ATTTCCTTCCCAACGAAGTCAAGTATGTTCACAATG...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTCAAAATGGAAGCAGCCTTTGGAATCTaGTTCGGAATTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGDPIALIQLLDAFFKMEAAFGI*FGIPAL
Trigger: CAGAGCTGGAATTCCGAATCAGATTCCAAAGGCTGC...TTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTTTAAACAAATCCCTCTaGAGGAAGCCATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SRLSRRSHCTDTASGCLLLNKSL*RKPWTG
Trigger: TCCTGTCCATGGCTTCCTTCAGAGGGATTTGTTTAA...AAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCACCTCAGTTTCCTTaGCAACCAAATGCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: WRIQLQGCPGIVPCKLGQPPQFP*QPNAEK
Trigger: TTTCTCGGCATTTGGTTGTCAAGGAAACTGAGGTGG...CTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTTCCATGGAAAAGCTGTaGACAGGTGCATGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFSMEKL*TGACFW
Trigger: CCAGAAACATGCACCTGTTCACAGCTTTTCCATGGA...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTCAGCTTTTGTCTTTGTaGCAAGAACTGCATTCACAG +
Preference number: 4 (lower is better)
Translates to: HQCPRATACAAWRIQLQGQLLSL*QELHSQ
Trigger: CTGTGAATGCAGTTCTTGGCACAAAGACAAAAGCTG...ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCTGCTTGAGGCAGTTCTaGCACTTTGATTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSCLRQF*HFDCLL
Trigger: CAAAAGACAATCAAAGTGGCAGAACTGCCTCAAGCA...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCACCGCTAGCCCCGTaGCTTCTGCTGGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPPLAP*LLLVGS
Trigger: GGACCCAACCAGCAGAAGGCACGGGGCTAGCGGTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR GCA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCTTCACCCATATTCATTaGAATTTCAGCCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTFTHIH*NFSLLA
Trigger: AGCAAGAAGGCTGAAATTGCAATGAATATGGGTGAA...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGGCCCACGGCCCCTTaGGCCAGTCTCAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRPTAP*ASLNPL
Trigger: CAAGGGGTTGAGACTGGCCCAAGGGGCCGTGGGCCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCACATTGTTACTCATATaGATGATGTTACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTTLLLI*MMLQSG
Trigger: ACCAGACTGTAACATCATCCATATGAGTAACAATGT...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTATGAGGAGATTGGTCTaGTGTGATCCAACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFMRRLV*CDPTGE
Trigger: CTCACCTGTTGGATCACACCAGACCAATCTCCTCAT...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp GTGTCTCCCCTGATGACTGCTAGCTGCATGGAAGATGGAAGAGGTCTTCTTTCCGCCTCTTTTGGAAGCTaGTCATCCACTGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: VSPLMTASCMEDGRGLLSASFGS*SSTGVI
Trigger: TATAACTCCAGTGGATGACCAGCTTCCAAAAGAGGC...GGAAAGAAGACCTCTTCCATCTTCCATGCAGCTAGCAGTCATCAGGGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCCAATATTGTCCAGCTTaGTATCTGCATCAGAAATTA +
Preference number: 4 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTQYCPA*YLHQKL
Trigger: TAATTTCTGATGCAGATACCAAGCTGGACAATATTG...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR CAA 72 bp AACTGTTTTGCCATTCCCACGGGTCCTAAGCTTCCTTaGAGAAAGATCTGTAGAATCAAAGCCCCGCAGGGT +
Preference number: 4 (lower is better)
Translates to: NCFAIPTGPKLP*RKICRIKAPQG
Trigger: ACCCTGCGGGGCTTTGATTCTACAGATCTTTCTCAAAGGAAGCTTAGGACCCGTGGGAATGGCAAAACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TATCCAAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGTCCTAAGCTTCCTTTaGGAAAGATCTGTAGAATCA +
Preference number: 4 (lower is better)
Translates to: YPKGLSPTNVPEPPHVLPVLSFL*ERSVES
Trigger: TGATTCTACAGATCTTTCTCAAAGGAAGCTTAGGAC...AGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATTGTCTTTTGTGGCTaGCTAATGATGGATACTTTG +
Preference number: 4 (lower is better)
Translates to: YCSLQAWAAAFQVPFCSVIVFCG*LMMDTL
Trigger: CAAAGTATCCATCATTAGTCAGCCACAAAAGACAAT...CACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGATGTGACAGTAGCCTaGGTGCTGGTGCCACCCGGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDVTVA*VLVPPG
Trigger: GCCGGGTGGCACCAGCACTCAGGCTACTGTCACATC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCTGTTACTCATATGGATaGTGTTACAGTCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSCYSYG*CYSLVP
Trigger: TGGAACCAGACTGTAACATCATCCATATGAGTAACA...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAGGCCACCAACGGTaGCTAGCCGGACAGCACCAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAGHQR*LAGQHQ
Trigger: TTGGTGCTGTCCGGCTAGTCACCGTTGGTGGCCTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp TTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCTAATCCGTCACAGCATGCTGAGTaGATGACCTCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FTGEFRITSKTSSSSSNPSQHAE*MTSAPG
Trigger: CCCTGGAGCTGAGGTCATTCACTCAGCATGCTGTGA...CGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp TCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAGTCCGTCATAGGTAATTaGTATATTCCACATCTTAGT +
Preference number: 4 (lower is better)
Translates to: SLQAWAAAFQVPFCSVIKSVIGN*YIPHLS
Trigger: ACTAAGATGTGGAATATAGCAATTACCTATGACGGA...CTTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAACCTTTAATTCCAGAGTaGAGTTCTTTGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKPLIPE*SSLEMR
Trigger: CCTCATTTCCAAAGAACTGCACTCTGGAATTAAAGG...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp CAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATGATACAGCTTCTGGATaGCTTCTTCAAAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: QSHRMCCLENTVTRLPRYDTASG*LLQNGR
Trigger: TCTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATC...ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp CATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGATACAGCTTCTGGATaGCTTCTTCAAAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: HPWFGDSRLSRRSHCTDTDTASG*LLQNGR
Trigger: TCTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATC...TGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp AACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCCCAGGTATTGTTCCCTaGAAGCTTGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: NCIHRGVQNYFKDLIIFLPGIVP*KLGQPH
Trigger: ATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG...GAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCCCAGTGGCCAGCATaGACTTGGTCGTTCAAACCT +
Preference number: 4 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTSQWPA*TWSFKP
Trigger: AGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGA...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp CTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTCAATTTCAGCCTTCTTaGTCAGCATTGGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LSPTNVPEPPHVLPGEYSQFQPS*SALVFH
Trigger: ATGAAAAACCAATGCTGAGCAAGAAGGCTGAAATTG...ACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTCTTCCTTTTGTGAGTTaGGAAACTGTCATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFLPFVS*ETVILQ
Trigger: CTGGAGGATGACAGTTTCCCAACTCACAAAAGGAAG...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCGCAACTGGTCCTGTCTaGGGAAGTGTGAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTATGPV*GSVSQL
Trigger: CAACTGACTCACACTTCCCCAGACAGGACCAGTTGC...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATAATGCCTTCTTCAAAATaGAAGAGTCCCTTTAATTCC +
Preference number: 4 (lower is better)
Translates to: RTFSHQCPRATACAAWRIMPSSK*KSPFNS
Trigger: GGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCAT...TATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGCCGATCCACTCCCAGTaGCCAGCATGCACTTGGTCG +
Preference number: 4 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNEPIHSQ*PACTWS
Trigger: CGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGG...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp CTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTCATAATTATGAGGTTTaGCTCTCCTACAGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSPTNVPEPPHVLPGEYSHNYEV*LSYSLL
Trigger: CAAAAGACTGTAGGAGAGCCAAACCTCATAATTATG...ACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCCCGTGCCTTCTGCTaGTTGGGTCCGCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPRAFC*LGPQGQ
Trigger: TTGTCCCTGCGGACCCAACCAGCAGAAGGCACGGGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CCA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTAACCCTCTGGGTTATTaGCTCATTCATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: SRLSRRSHCTDTASGCLLNPLGY*LIHHNF
Trigger: GAAGTTGTGATGAATGAGCCAATAACCCAGAGGGTT...AAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCCCGAGAACCATCTaGCCATGGGCTGGCAGCCGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSPRTI*PWAGSR
Trigger: TCGGCTGCCAGCCCATGGCCAGATGGTTCTCGGGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTATCCCTGGATCAGGATaGTCTGCCCCTCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ELHSQGSSELLQRPHHLPIPGSG*SAPPPV
Trigger: AACTGGAGGAGGGGCAGACCATCCTGATCCAGGGAT...AGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTAGATTTGGAGGTTCATaGCTGTCCCACAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFRFGGS*LSHRTN
Trigger: ATTTGTCCTGTGGGACAGCCATGAACCTCCAAATCT...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAGGGTCGGTCAGCTaGAGGAGGTCAGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSGSVS*RRSGES
Trigger: GCTTTCCCCTGACCTCCTTCAGCTGACCGACCCTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCATGCTGGGGGAGCTaGACCAAGAGGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPCWGS*TKRKVR
Trigger: CCTCACCTTCCTCTTGGTTCAGCTCCCCCAGCATGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGGGAGTCCCCTCCTaGGTGCCGATAGGCCACATT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLGVPS*VPIGHI
Trigger: AATGTGGCCTATCGGCACTCAGGAGGGGACTCCCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTATTTTAAAGATGATCTaGTCGTCCTCAGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFILKMI*SSSVSG
Trigger: CCCTGACACTGAGGACGATCAGATCATCTTTAAAAT...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACCAGAAGTGGTGGATaGGGAAGACCCTGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTRSGG*GRPWGQ
Trigger: CTGCCCCCAGGGTCTTCCTCATCCACCACTTCTGGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCATTGTCTTTTGTGGCTaGCTAATGATGGATACTTTG +
Preference number: 4 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSIVFCG*LMMDTL
Trigger: CAAAGTATCCATCATTAGTCAGCCACAAAAGACAAT...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp AACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCCTGTCTGGGGAAGTGTaGGTCAGTTGTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: NCIHRGVQNYFKDLIIFLLSGEV*VSCGFH
Trigger: GTGGAATCCACAACTGACTCACACTTCCCCAGACAG...GAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCAAGCTTGGAGCGTTaGGAGGGCCCTCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPSLER*EGPLLP
Trigger: TGGGAGAAGAGGGCCCTCTCAACGCTCCAAGCTTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGGGTGAGGGGTCCTaGCAATGTGCCCCGAGATCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQGEGS*QCAPRS
Trigger: AGATCTCGGGGCACATTGTCAGGACCCCTCACCCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTCCTCACAGCTCACTTTaGGGCTTCCTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFPHSSL*GFLFSL
Trigger: TAAAGAAAATAGGAAGCCTCAAAGTGAGCTGTGAGG...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGAGGTCAGCCACGGTaGAGAGAAACCCTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGGQPR*RETLSP
Trigger: GGGGGAAAGGGTTTCTCTTCACCGTGGCTGACCTCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCCCTGGCTTCTTCATaGTCTCCCCAGCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNALASS*SPQPVE
Trigger: CTCCACAGGCTGGGGAGATCATGAAGAAGCCAGGGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCCTCTCAGAATGGCTaGTGTTTGGTGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTSSQNG*CLVADR
Trigger: CCTATCAGCCACCAAACAGCAGCCATTCTGAGAGGA...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGCTCCACCCTTCCGTaGAGAGGCAATTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSSTLP*RGNSRR
Trigger: CCTGCGGGAATTGCCTCTGCACGGAAGGGTGGAGCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp TTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGCTGAATCAGTTTAGATaGAATCACGGTGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: LQGCPGIVPCKLGQPHSRLNQFR*NHGEIF
Trigger: AAAGATTTCACCGTGATTCCATCTAAACTGATTCAG...CCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCGATCCACTCCCAGTaGCCAGCATGCACTTGGTCG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPIHSQ*PACTWS
Trigger: CGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCATCTGGCCATGGGCTaGCAGCCGAGTTCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHLAMG*QPSSRS
Trigger: ACTGCGAGAACTCGGCTGCCAGCCCATGGCCAGATG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GAGTTGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATTCCACGAGGTTCTTCTaGTCGAGGCTCCCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: ELGNCHPPVSRKLSHDNYSTRFF*SRLPEN
Trigger: GTTCTCGGGGAGCCTCGACCAGAAGAACCTCGTGGA...ATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCGCAGCATGGATCCCTaGATCAGGATGGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRSMDP*IRMVCP
Trigger: GGGGCAGACCATCCTGATCCAGGGATCCATGCTGCG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp CCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTAAAGTACCGCCATGTTaGTTACTGACAGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: PHVLPGEYSYKVAQVLFPKVPPC*LLTENV
Trigger: CACATTTTCTGTCAGTAACCAACATGGCGGTACTTT...AGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AACTCCAGGTGGCCCCCTGTAGGGTCTGTTATATTTAGAGTTTTCTGGAACACAGTGGAACAGATGGATTaGGTCCATTGTAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: NSRWPPVGSVIFRVFWNTVEQMD*VHCSNS
Trigger: GCTGTTGCTACAATGGACCCAATCCATCTGTTCCAC...TGTGTTCCAGAAAACTCTAAATATAACAGACCCTACAGGGGGCCACCTGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCCTGGTGAGGGTTGGCTaGCTGCTTATTCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTLVRVG*LLILRE
Trigger: TTCTCTGAGAATAAGCAGCCAGCCAACCCTCACCAG...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGAGTAAATCTTCTCCCTaGGTGAGTCTTCATCTATGG +
Preference number: 4 (lower is better)
Translates to: WRIQLQGCPGIVPCKLGQSKSSP*VSLHLW
Trigger: CCATAGATGAAGACTCACCCAGGGAGAAGATTTACT...CTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
3UTR CAA 72 bp AATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTaGGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: NGRVPLIPECSS*EMRATGPVWGS
Trigger: ACTTCCCCAGACAGGACCAGTTGCCCTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCAGTGTCAGGGTCTaGTGCCTTCAACACGCGGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLSVRV*CLQHAG
Trigger: TCCCGCGTGTTGAAGGCATCAGACCCTGACACTGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp TGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCTCCCTGTGGGGTCCATaGTTTGAAATTCCACGGTAT +
Preference number: 4 (lower is better)
Translates to: WLTNDGYFGLPFVSWETVSLWGP*FEIPRY
Trigger: ATACCGTGGAATTTCAAATCATGGACCCCACAGGGA...GACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp TGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCCAGCCACGCACTCTCTaGCTTGTACACAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: WLTNDGYFGLPFVSWETVQPRTL*LVHNFA
Trigger: AGCAAAATTGTGTACAAGTCAGAGAGTGCGTGGCTG...GACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp GAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGGAGGTCAGCCACGGTaGAGAGAAACCCTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: ETVILQFQGNYPMIIIDDGGQPR*RETLSP
Trigger: GGGGGAAAGGGTTTCTCTTCACCGTGGCTGACCTCC...ATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACTGGCGTCCACATCTaGAGCTCGCAGCATGGATCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTGVHI*SSQHGS
Trigger: GGATCCATGCTGCGAGCTTCAGATGTGGACGCCAGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGCATGCTGAGTGAATaGCCTCAGCTCCAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSMLSE*PQLQGR
Trigger: ACGGCCCTGGAGCTGAGGTCATTCACTCAGCATGCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCACCACCCCATGCTaGGGTTCGCGAGCAATCACA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLTTPC*GSRAIT
Trigger: TGTGATTGCTCGCGAACCTCAGCATGGGGTGGTGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp ATGCCTTCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAGAACTGATCCACTGTaGCTCCAGCTCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: MPSSKWKSPFNSRVQFFGRTDPL*LQLSSP
Trigger: TGGTGAGGAGAGCTGGAGTCACAGTGGATCAGTTCT...TCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp GCATGGAAGATGGAAGAGGTCTTCTTTCCAGATGAAAGGAACCAGAAGTGGTGGAAACACGGCCATGAATaGAGCCTTTGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: AWKMEEVFFPDERNQKWWKHGHE*SLWNLI
Trigger: AATCAGATTCCAAAGGCTGCATTCATGGCCGTGTTT...CCACCACTTCTGGTTCCTTTCATCTGGAAAGAAGACCTCTTCCATCTTCCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTGTGATGGCTCGAGACTaGCCCTCAAGGAGACTCAGA +
Preference number: 4 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSVMARD*PSRRLR
Trigger: TCTGAGTCTCCTTGAGGGGCAGTCTCGAGCCATCAC...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTCAGCCATCCATGCTaGAGGCCACCAACGGTGACT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVSHPC*RPPTVT
Trigger: AGTCACCGTTGGTGGCCTGCAGCATGGATGGCTGAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGAAAGTCAGCCATCCATaGTGCAGGCCACCAACGGTG +
Preference number: 4 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNEKVSHP*CRPPTV
Trigger: CACCGTTGGTGGCCTGCAGCATGGATGGCTGACTTT...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp ATGCCTTCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAGGAAATGAGGGCAACTaGTCCTGTCTGGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: MPSSKWKSPFNSRVQFFGGNEGN*SCLGKC
Trigger: ACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC...TCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp ACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCATCCTCTGTCTTCCACATCCTTaGTTTGGGGACTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TNDGYFGLPFVSWETVILCLPHP*FGDSRL
Trigger: AAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGACA...GAGGATGACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGGTGCCACCCGGCTaGACAGGATTTGTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLVPPG*TGFVFH
Trigger: GTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGTTCCCTGCAAGCTTaGGCAGCCGCATTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCSLQA*AAAFQV
Trigger: CACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGAACCATCTGGCCATaGGCTGGCAGCCGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRTIWP*AGSRVL
Trigger: GAGAACTCGGCTGCCAGCCCATGGCCAGATGGTTCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCACGAGGTTCTTCTaGTCGAGGCTCCCCGAGAAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSTRFF*SRLPEN
Trigger: GTTCTCGGGGAGCCTCGACCAGAAGAACCTCGTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp TTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCTAATCCGATGGCTGCTGTTTGGTaGCTGATAGGCGATCTGCAT +
Preference number: 4 (lower is better)
Translates to: FTGEFRITSKTSSSSSNPMAAVW*LIGDLH
Trigger: ATGCAGATCGCCTATCAGCCACCAAACAGCAGCCAT...CGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCGAACAACTCCAGCCTaGAGGTCAGCCACGGTGAAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRTTPA*RSATVK
Trigger: CTTCACCGTGGCTGACCTCCAGGCTGGAGTTGTTCG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GATTGTCTTTTGTGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTATCAGTCCTGGCCCTaGCTTCTTCATGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: DCLLWLTNDGYFGLPFVSYQSWP*LLHDLP
Trigger: GGGGAGATCATGAAGAAGCCAGGGCCAGGACTGATA...ACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCACAAAAGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGAACAGCAGGGCATCCTaGGGAATGTCCAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNENSRAS*GMSRST
Trigger: TGTGGACCTGGACATTCCCCAGGATGCCCTGCTGTT...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCACAGTCTCCAGTGTaGTCTCAAACACCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPQSPV*SQTPRA
Trigger: AGCACGGGGTGTTTGAGATCACACTGGAGACTGTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCTTTGCAAACTTCCTaGGCGCCAAGCCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNALQTS*APSLRT
Trigger: AGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTTTAATAAAACTCGCTaGTCACTCCTGACAACGCCG +
Preference number: 4 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTFNKTR*SLLTTP
Trigger: CGGCGTTGTCAGGAGTGATCAGCGAGTTTTATTAAA...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAAAGACCTGTGGAGTaGGTTTCCCAACCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQRPVE*VSQPSG
Trigger: CCCAGAGGGTTGGGAAACTCACTCCACAGGTCTTTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAAACTGTTCCCAAGTaGTGGCTCGAGACTGCCCCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNETVPK*WLETAP
Trigger: AGGGGCAGTCTCGAGCCATCACTTGGGAACAGTTTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTAGCATGCTGAGTGAATaGCCTCAGCTCCAGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSISMLSE*PQLQGR
Trigger: ACGGCCCTGGAGCTGAGGTCATTCACTCAGCATGCT...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCACAGCATGCTGAGTaGATGACCTCAGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSQHAE*MTSAPG
Trigger: CCCTGGAGCTGAGGTCATTCACTCAGCATGCTGTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp GAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATCTCACCACCCCATGCTaGGGTTCGCGAGCAATCACA +
Preference number: 4 (lower is better)
Translates to: ETVILQFQGNYPMIIIDDLTTPC*GSRAIT
Trigger: TGTGATTGCTCGCGAACCTCAGCATGGGGTGGTGAG...ATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCATGGCGTGGCTTTTaGGTGATGCTGAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPWRGF*VMLNSR
Trigger: CCTGCTGTTCAGCATCACTCAAAAGCCACGCCATGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGTGCATGTTTCTGGTaGGGGTTGGCTGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGACFW*GLAGCL
Trigger: TAAGCAGCCAGCCAACCCTCACCAGAAACATGCACC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAAGCTTGAGTGAGTaGCAGGGACTCCATCAGAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNASLSE*QGLHQR
Trigger: CCTCTGATGGAGTCCCTGGCACTCACTCAAGCTTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATCTCAAACACCCCGTaGTCGGTCCGCAGTCCATTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNISNTP*SVRSPL
Trigger: CAATGGACTGCGGACCGAGCACGGGGTGTTTGAGAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp TTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCTAATCCGTTCTCCCATGTGCTGTaGTTGCTTTGGTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FTGEFRITSKTSSSSSNPFSHVL*LLWLEE
Trigger: TTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAA...CGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCAGGTATTGTTCCCTaGAAGCTTGGGCAGCCGCAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPGIVP*KLGQPH
Trigger: ATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGCAGAGCCACCGCATGTaGTGCCTGGAGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNEQSHRM*CLENTV
Trigger: AACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGCTCCAAGGCAGCTGCTaGAGCTTTGCAAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNELQGSC*SFANFL
Trigger: CAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAG...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAAGGAGGGCTTCTGTaGTTCCTCCTGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKGGLL*FLLEGQ
Trigger: CTGACCCTCCAGGAGGAAGCACAGAAGCCCTCCTTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGATGGCTCGAGACTaGCCCTCAAGGAGACTCAGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVMARD*PSRRLR
Trigger: TCTGAGTCTCCTTGAGGGGCAGTCTCGAGCCATCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAAGTCAGCCATCCATaGTGCAGGCCACCAACGGTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKVSHP*CRPPTV
Trigger: CACCGTTGGTGGCCTGCAGCATGGATGGCTGACTTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCTGAGTGCATTTCATaGCAGGGGAGAGAGGAACCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPECIS*QGREEP
Trigger: GGGTTCCTCTCTCCCCTGGCATGAAATGCACTCAGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAACCCCTTGTTCCTaGTTACCACAGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSTPCS*LPQAGL
Trigger: GAGCCCTGCCTGTGGTAACCAGGAACAAGGGGTTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTAAAGCAGTCAGTCTaGGAGTCCCCTCCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVKQSV*ESPPEC
Trigger: GCACTCAGGAGGGGACTCCCAGACTGACTGCTTTAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCTTTGATTGTCTTTTGTaGCTGACTAATGATGGATAC +
Preference number: 4 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFFDCLL*LTNDGY
Trigger: GTATCCATCATTAGTCAGCCACAAAAGACAATCAAA...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp GAGTTGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATGGAAATGAGGGCAACTaGTCCTGTCTGGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ELGNCHPPVSRKLSHDNYGNEGN*SCLGKC
Trigger: ACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC...ATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTATGCCTTCTTCAAAATaGAAGAGTCCCTTTAATTCC +
Preference number: 4 (lower is better)
Translates to: CCLENTVTRLPRYCSLQAMPSSK*KSPFNS
Trigger: GGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCAT...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTCATAATTATGAGGTTTaGCTCTCCTACAGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFHNYEV*LSYSLL
Trigger: CAAAAGACTGTAGGAGAGCCAAACCTCATAATTATG...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGACAAACTCCAGGTaGCCCCCTGTAGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVTNSR*PPVGSV
Trigger: AACAGACCCTACAGGGGGCCACCTGGAGTTTGTCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGCCTTCTGCTGGTTaGGTCCGCAGGGACAAAACT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVPSAG*VRRDKT
Trigger: AGTTTTGTCCCTGCGGACCCAACCAGCAGAAGGCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CCA 90 bp GAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCCACGAAGTCTTTGGTaGAGTCGCTGTCATCATGAT +
Preference number: 4 (lower is better)
Translates to: ELHSQGSSELLQRPHHLPPRSLW*SRCHHD
Trigger: ATCATGATGACAGCGACTCCACCAAAGACTTCGTGG...AGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATCCCTGGATCAGGATaGTCTGCCCCTCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIPGSG*SAPPPV
Trigger: AACTGGAGGAGGGGCAGACCATCCTGATCCAGGGAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGAAGCTCGCAGCATaGATCCCTGGATCAGGATGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLKLAA*IPGSGW
Trigger: CCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTATTGCAATGGAAGGTaGCTGGTTGTCTACTGGGTA +
Preference number: 4 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTYCNGR*LVVYWV
Trigger: TACCCAGTAGACAACCAGCCACCTTCCATTGCAATA...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAACAGCAGGGCATCCTaGGGAATGTCCAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNSRAS*GMSRST
Trigger: TGTGGACCTGGACATTCCCCAGGATGCCCTGCTGTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAACCAAGAGGAAGGTaGGGTTCTCCGCAGGTGTAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNEPRGR*GSPQVY
Trigger: ATACACCTGCGGAGAACCTCACCTTCCTCTTGGTTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGGGTGAAATTGTGTTaGAGTAGCCCTGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNWVKLC*SSPVPH
Trigger: GTGGGGGACAGGGCTACTTCAACACAATTTCACCCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCAGGAGCCCCACTTaGGAAGGGGAATGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFRSPT*EGECKS
Trigger: ACTCTTGCATTCCCCTTCTCAAGTGGGGCTCCTGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAACACGCGGGAAGTaGTGTAAATCCCGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSTRGK*CKSRSS
Trigger: GCTGCTACGGGATTTACATCACTTCCCGCGTGTTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGTCTGGGGAAGTGTaGGTCAGTTGTGGATTCCAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLSGEV*VSCGFH
Trigger: GTGGAATCCACAACTGACTCACACTTCCCCAGACAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCGATCCCATTGCACTaGTACAGCTTCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAIPLH*YSFWMP
Trigger: AGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCTTCTCCCATTGGTaGAGGCAACAGGTTCACCAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLFSHW*RQQVHH
Trigger: GTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAGAGAGTTCATGCTaGCAGGGCCCAACTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSESSC*QGPTLL
Trigger: GAGAAGAGTTGGGCCCTGTCAGCATGAACTCTCTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCGGAATTCCAGCTCTaGTATAGACAGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSEFQL*YRQAAT
Trigger: CGTGGCTGCCTGTCTATATCAGAGCTGGAATTCCGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGAACTGATCCACTGTaGCTCCAGCTCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRTDPL*LQLSSP
Trigger: TGGTGAGGAGAGCTGGAGTCACAGTGGATCAGTTCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGTATCTCCAAGGAGTaGTGCTTCCCATCTGTGACG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGISKE*CFPSVT
Trigger: CGTCACAGATGGGAAGCATCACTCCTTGGAGATACC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGATCCACTTCCTCCTaGGTGCATTTCATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRSTSS*VHFMPG
Trigger: CCCTGGCATGAAATGCACTCAGGAGGAAGTGGATCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGATAGGCCACATTCTTaGTGTCCACATCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDRPHS*CPHPAG
Trigger: CCCAGCAGGATGTGGACAGCAAGAATGTGGCCTATC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGCCCTTCTCCCATGTaGTGTGCTTGCTTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCPSPM*CACFGW
Trigger: CCAACCAAAGCAAGCACAGCACATGGGAGAAGGGCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAGCAGATGCCAAATaGCCTTCTCCCATGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAADAK*PSPMCC
Trigger: ACAGCACATGGGAGAAGGGCATTTGGCATCTGCTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTAGCCACCGCATGTGCTaGCTGGAGAATACAGTTACA +
Preference number: 4 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSSHRMC*LENTVT
Trigger: TGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCT...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGAGCCACCGCATGTaGTGCCTGGAGAATACAGTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQSHRM*CLENTV
Trigger: AACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCCAGTGGCCAGCATaGACTTGGTCGTTCAAACCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSQWPA*TWSFKP
Trigger: AGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGCTGCTGCAGCTTTaGAAACTTCCTGAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQLLQL*KLPERQ
Trigger: TTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCCAAGGCAGCTGCTaGAGCTTTGCAAACTTCCTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLQGSC*SFANFL
Trigger: CAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGGGTCCTGACAATGTaGCCCGAGATCTTAACATGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGVLTM*PEILTC
Trigger: GCATGTTAAGATCTCGGGGCACATTGTCAGGACCCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGGATCAGGATGGTCTaGCCCTCCTCCAGTTCAATC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNWIRMV*PSSSSI
Trigger: GATTGAACTGGAGGAGGGGCAGACCATCCTGATCCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGGGGACCTGTTGTTaGCATCCCAAAGGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQGTCC*HPKGRR
Trigger: CCTTCTACCTTTGGGATGGCAACAACAGGTCCCCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCAAAATTTGAGGAGTaGCCGAGTTCCCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPKFEE*PSSLWG
Trigger: ACCCCACAGGGAACTCGGCCACTCCTCAAATTTTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAACTGGTCCTGTCTaGGGAAGTGTGAGTCAGTTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNATGPV*GSVSQL
Trigger: CAACTGACTCACACTTCCCCAGACAGGACCAGTTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGAAATGAGGGCAACTaGTCCTGTCTGGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGNEGN*SCLGKC
Trigger: ACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCACATCCTTGGTTTaGGGACTCCAGGCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSTSLV*GLQAFQ
Trigger: CTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTGCAGTCAAAGACCTGTaGAGTGAGTTTCCCAACCCT +
Preference number: 4 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSAVKDL*SEFPNP
Trigger: AGGGTTGGGAAACTCACTCCACAGGTCTTTGACTGC...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCCATGAATGCAGCCTTTaGAATCTGATTCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTHECSL*NLIRNS
Trigger: GGAATTCCGAATCAGATTCCAAAGGCTGCATTCATG...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTATCAGTCCTGGCCCTaGCTTCTTCATGATCTCCCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNYQSWP*LLHDLP
Trigger: GGGGAGATCATGAAGAAGCCAGGGCCAGGACTGATA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCAGGAGCCTCTTTTaGAAGCTGGTCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSRSLF*KLVIHW
Trigger: CCAGTGGATGACCAGCTTCCAAAAGAGGCTCCTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGACCAATGTCTTGCATaGGGGGCATGTAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDQCLA*GACRPL
Trigger: AAGTGGCCTACATGCCCCCCATGCAAGACATTGGTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp ATGCCTTCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAAAGGACGCATGAAGTaGAACAGATGGATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: MPSSKWKSPFNSRVQFFGKGRMK*NRWIGS
Trigger: GGACCCAATCCATCTGTTCCACTTCATGCGTCCTTT...TCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp TTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCTAATCCGGTTGAGATCATACACTaGAAAGGACGCATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FTGEFRITSKTSSSSSNPVEIIH*KGRMKW
Trigger: CCACTTCATGCGTCCTTTCCAGTGTATGATCTCAAC...CGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAGGAGGCCATGGCGTaGCTTTTGAGTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNEEAMA*LLSDAE
Trigger: TTCAGCATCACTCAAAAGCCACGCCATGGCCTCCTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCACAGCCAGGAGCGTaGTGGTTGTTAAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPQPGA*WLLRNL
Trigger: GAGGTTTCTTAACAACCACCACGCTCCTGGCTGTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAATGCAAGCTTGAGTaGGTGCCAGGGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKCKLE*VPGTPS
Trigger: TGATGGAGTCCCTGGCACTCACTCAAGCTTGCATTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCACATCCTGCTGGGTaGAATTGTGTTGAAGTAGCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPHPAG*NCVEVA
Trigger: GGCTACTTCAACACAATTTCACCCAGCAGGATGTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTTTCAGGAGCCCCACTTaGGAAGGGGAATGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSIFRSPT*EGECKS
Trigger: ACTCTTGCATTCCCCTTCTCAAGTGGGGCTCCTGAA...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTTTCAGTTCCAAAATTTaGGGAGTGGCCGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSFSSKI*GVAEFP
Trigger: AGGGAACTCGGCCACTCCTCAAATTTTGGAACTGAA...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCACCTTATCTGCTTaGGGCAGTTCTGCCACTTTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSTLSA*GSSATL
Trigger: CAAAGTGGCAGAACTGCCTCAAGCAGATAAGGTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCTCAGGACTCCCTGTaGGAAGGGCATGATAAAGAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPQDSL*EGHDKD
Trigger: ATCTTTATCATGCCCTTCTCACAGGGAGTCCTGAGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAGCCTTTGGAATCTaGTTCGGAATTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAAFGI*FGIPAL
Trigger: CAGAGCTGGAATTCCGAATCAGATTCCAAAGGCTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTTTGGGCAAGACGTTaGTGGGGAATTTGTGACGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLWARR*WGICDG
Trigger: TCCGTCACAAATTCCCCATCAACGTCTTGCCCAAAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAACGCCTCAGGAACTTaGTTGTCCACTGGGAGGATT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNASGT*LSTGRI
Trigger: AATCCTCCCAGTGGACAATCAAGTTCCTGAGGCGTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTTTCAGAGGGTTGGTaGACGCCTCAGGAACTTGAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLSEGW*TPQELD
Trigger: ATCAAGTTCCTGAGGCGTTCACCAACCCTCTGAAAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGCTGATGATGCTTTaGCCTCCCTCAGTCACTTTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVLMML*PPSVTF
Trigger: GAAAGTGACTGAGGGAGGTCAAAGCATCATCAGCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGGTGGCTCATCGTTaGCAGGGAATACCTCAACAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLVAHR*QGIPQH
Trigger: ATGTTGAGGTATTCCCTGTCAACGATGAGCCACCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAACAGTAAGGGCTGTTaGGCAGCCCTCATCTACAAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNSKGC*AALIYN
Trigger: GTTGTAGATGAGGGCTGCTCAACAGCCCTTACTGTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCTTGATGGTGATTTaGCAGTCAAGAGCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSLMVI*QSRAGD
Trigger: GTCCCCTGCTCTTGACTGTCAAATCACCATCAAGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGATTCCACCTTATCTaGTTGAGGCAGTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGFHLI*LRQFCH
Trigger: GTGGCAGAACTGCCTCAAGCAGATAAGGTGGAATCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCAGGCGATCCCATTaGACTGATACAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSRRSH*TDTASG
Trigger: TCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGCCACCGCATGTGCTaGCTGGAGAATACAGTTACA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSHRMC*LENTVT
Trigger: TGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTTAATGAGGTCGGTTaGCTCTTCCCAGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVNEVG*LFPVSS
Trigger: GGAAGAGACTGGGAAGAGGCAACCGACCTCATTAAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCTCTCAGAATGGCTaGTGTTTGGTGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSSQNG*CLVADR
Trigger: CCTATCAGCCACCAAACAGCAGCCATTCTGAGAGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCGTGGACTGTCATAGGTaGACTCCTTTCAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: NCIHRGVQNYFKDLIIFLVDCHR*TPFKEE
Trigger: TTCTTCTTTGAAAGGAGTGCACCTATGACAGTCCAC...GAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCTTGACAACCAAATaGCGAGAAACTCCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSLTTK*RETPGA
Trigger: GGCTCCTGGAGTTTCTCGGCATTTGGTTGTCAAGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp TGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCCACACAGTAATATTCTaGACTACAAAGTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: WLTNDGYFGLPFVSWETVHTVIF*TTKSGA
Trigger: AGCTCCTGACTTTGTAGTGCAGAATATTACTGTGTG...GACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCCTCTCTGAGTCATCATaGATGTACGTCAACCTCATT +
Preference number: 4 (lower is better)
Translates to: NCIHRGVQNYFKDLIIFLLSESS*MYVNLI
Trigger: AATGAGGTTGACGTACATGCATGATGACTCAGAGAG...GAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAAAGGAACCAGAAGTaGTGGATGAGGAAGACCCTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNERNQK*WMRKTL
Trigger: CAGGGTCTTCCTCATCCACCACTTCTGGTTCCTTTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp TTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCTAATCCGAGTGTGAGTCAGTTGTaGATTCCACCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: FTGEFRITSKTSSSSSNPSVSQL*IPPYLL
Trigger: AAGCAGATAAGGTGGAATCCACAACTGACTCACACT...CGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGTCTTCCACATCCTTaGTTTGGGGACTCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCLPHP*FGDSRL
Trigger: AAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGACA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGACCGCATGTGCTGCCTaGAGAATACAGTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNETACAA*RIQLQG
Trigger: ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGT...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAGTCAAAGACCTGTaGAGTGAGTTTCCCAACCCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAVKDL*SEFPNP
Trigger: AGGGTTGGGAAACTCACTCCACAGGTCTTTGACTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGTACAGCTCCCACCTaGACACTTCAGTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGTAPT*TLQFCS
Trigger: AGAGCAAAACTGAAGTGTCCAGGTGGGAGCTGTACC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATGGCTGCTGTTTGGTaGCTGATAGGCGATCTGCAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNMAAVW*LIGDLH
Trigger: ATGCAGATCGCCTATCAGCCACCAAACAGCAGCCAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGAATGGCTGCTGTTTaGTGGCTGATAGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRMAAV*WLIGDL
Trigger: CAGATCGCCTATCAGCCACCAAACAGCAGCCATTCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTGACCAATGTCTTGCATaGGGGGCATGTAGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSIDQCLA*GACRPL
Trigger: AAGTGGCCTACATGCCCCCCATGCAAGACATTGGTC...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAATGGAAGGTGGCTaGTTGTCTACTGGGTATACC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAMEGG*LSTGYT
Trigger: GGTATACCCAGTAGACAACCAGCCACCTTCCATTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCGGGACCTATTGCAATaGAAGGTGGCTGGTTGTCTA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRDLLQ*KVAGCL
Trigger: TAGACAACCAGCCACCTTCCATTGCAATAGGTCCCG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAACTGGTCGGCAGTTaGTTCTATCCTCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNELVGS*FYPQMP
Trigger: AGGCATCTGAGGATAGAACCAACTGCCGACCAGTTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACGTACACCGTGAACTaGTCGGCAGTTGGTTCTATC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTYTVN*SAVGSI
Trigger: GATAGAACCAACTGCCGACCAGTTCACGGTGTACGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGGTGAGGGTTGGCTaGCTGCTTATTCTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLVRVG*LLILRE
Trigger: TTCTCTGAGAATAAGCAGCCAGCCAACCCTCACCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCCTGTGGGGTCCATaGTTTGAAATTCCACGGTAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSLWGP*FEIPRY
Trigger: ATACCGTGGAATTTCAAATCATGGACCCCACAGGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCAGTTCCAAAATTTaGGGAGTGGCCGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFSSKI*GVAEFP
Trigger: AGGGAACTCGGCCACTCCTCAAATTTTGGAACTGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGCTGACACTTGGTTaGCCTTTATACCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQLTLG*PLYPQR
Trigger: CCTTTGTGGGTATAAAGGTCAACCAAGTGTCAGCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTGGTTGGAGGAATATaGAGGATGGCATTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLVGGI*RMALSS
Trigger: GGAGGACAATGCCATCCTTCATATTCCTCCAACCAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAGTTCTGCCACTTTaGTTGTCTTTTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAVLPL*LSFVAD
Trigger: GTCAGCCACAAAAGACAATCAAAGTGGCAGAACTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp TTTTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGGCAGTTCTGCCACTTTaGTTGTCTTTTGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FSGTHIIMRFGSPTVFCLAVLPL*LSFVAD
Trigger: GTCAGCCACAAAAGACAATCAAAGTGGCAGAACTGC...CAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCGCAGGGACAAAACTaGGCTTTTGTTAATGAGGTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPQGQN*AFVNEV
Trigger: GACCTCATTAACAAAAGCTCAGTTTTGTCCCTGCGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATAATCAATGTTGGGTaGAGGGGGATCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIINVG*RGIQML
Trigger: CAGCATCTGGATCCCCCTTCACCCAACATTGATTAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGCCACGCACTCTCTaGCTTGTACACAATTTTGCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQPRTL*LVHNFA
Trigger: AGCAAAATTGTGTACAAGTCAGAGAGTGCGTGGCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAAGGAGGTCAGGATaGACTGATCCACTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSRRSG*TDPLPE
Trigger: TTCTGGAAGTGGATCAGTTCATCCTGACCTCCTTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCACAGTCCAGAACTaGTGTAGTCAAGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFTVQN*CSQGGQ
Trigger: CTGACCTCCTTGACTACATCAGTTCTGGACTGTGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTTCATTGTCGACAACCTaGAACTGTTCCCAAGTGATG +
Preference number: 4 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSSLSTT*NCSQVM
Trigger: CATCACTTGGGAACAGTTTCAGGTTGTCGACAATGA...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCACCTCAGTTTCCTTaGCAACCAAATGCCGAGAAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPPQFP*QPNAEK
Trigger: TTTCTCGGCATTTGGTTGTCAAGGAAACTGAGGTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTATGTCACGGCCTCTaGGATAACATCTCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVCHGL*DNISLR
Trigger: TCTCAGAGAGATGTTATCTCAGAGGCCGTGACATAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACTGGAAAGGACGCATaGAGTGGAACAGATGGATTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTGKDA*SGTDGL
Trigger: CAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCATGGAAAAGCTGTaGACAGGTGCATGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSMEKL*TGACFW
Trigger: CCAGAAACATGCACCTGTTCACAGCTTTTCCATGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATCAGCAAGGCTCTCTaGGTCATCATGCATGTACGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNISKAL*VIMHVR
Trigger: ACGTACATGCATGATGACTCAGAGAGCCTTGCTGAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp TTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCTAATCCGGTCTTCATCTATGGCTaGAAGAATAGCACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: FTGEFRITSKTSSSSSNPVFIYG*KNSTGN
Trigger: ATTTCCAGTGCTATTCTTTCAGCCATAGATGAAGAC...CGGATTAGAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCCCTATCTTAAGCTaGAGTTGCCCATTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLPILS*SCPFWG
Trigger: TCCCCAAAATGGGCAACTTCAGCTTAAGATAGGGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTTTGTGCCAAGAACTaGATTCACAGGGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLCAKN*IHRGVQ
Trigger: CTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCCATGTGCTGTGCTTaGTTTGGTTGGAGGAATATG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPMCCA*FGWRNM
Trigger: CATATTCCTCCAACCAAAGCAAGCACAGCACATGGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCTCCCATGTGCTGTaGTTGCTTTGGTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFSHVL*LLWLEE
Trigger: TTCCTCCAACCAAAGCAAGCACAGCACATGGGAGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGATGACTGCTAGCTaGATGGAAGATGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLMTAS*MEDGRG
Trigger: ACCTCTTCCATCTTCCATGCAGCTAGCAGTCATCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACACTCCACTTTCTTTaGTGGTCTTCTCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTLHFL*WSSPRQ
Trigger: CTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAGTGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGGACACTTCAGTTTTaGTCTCAGTTGGGACTCTGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNWTLQF*SQLGLW
Trigger: CCAGAGTCCCAACTGAGAGCAAAACTGAAGTGTCCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAACACGGGACCTATTaGAATGGAAGGTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKHGTY*NGRWLV
Trigger: AACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp GAGTTGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAAATTCCAAGTCATCTaGTGCAGTGTCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: ELGNCHPPVSRKLSHDNYKFQVI*CSVRVS
Trigger: ACTGACCCTGACACTGCAGCAGATGACTTGGAATTT...ATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTCTGGGAATCCATTaGCCCGGTGTGTGTGTATCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNILGIH*PGVCVS
Trigger: AGATACACACACACCGGGGCAATGGATTCCCAGAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACCGCATGTGCTGCCTaGAGAATACAGTTACAAGGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTACAA*RIQLQG
Trigger: ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp TTTTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGTGGCCAGCATGCACTTaGTCGTTCAAACCTATCCAA +
Preference number: 4 (lower is better)
Translates to: FSGTHIIMRFGSPTVFCLWPACT*SFKPIQ
Trigger: TTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCA...CAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGGCCAGCATGCACTTaGTCGTTCAAACCTATCCAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNWPACT*SFKPIQ
Trigger: TTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATGAGGAGATTGGTCTaGTGTGATCCAACAGGTGAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNMRRLV*CDPTGE
Trigger: CTCACCTGTTGGATCACACCAGACCAATCTCCTCAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTTCTGATGGAGATGTaGACTGTCATAGGTGCACTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVLMEM*TVIGAL
Trigger: GAGTGCACCTATGACAGTCCACATCTCCATCAGAAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCACGAAGTCTTTGGTaGAGTCGCTGTCATCATGAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPRSLW*SRCHHD
Trigger: ATCATGATGACAGCGACTCCACCAAAGACTTCGTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGACCACGAAGTCTTTaGTGGAGTCGCTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRPRSL*WSRCHH
Trigger: ATGATGACAGCGACTCCACCAAAGACTTCGTGGTCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGATGTAGTCATCACTaGCGTCCACATCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRCSHH*RPHLKL
Trigger: GAGCTTCAGATGTGGACGCCAGTGATGACTACATCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGATCTCCCCAGCCTGTaGAGGCTTTGTGATATTGAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDLPSL*RLCDIE
Trigger: TTCAATATCACAAAGCCTCCACAGGCTGGGGAGATC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATAGCCTATCAGTCCTaGCCCTGGCTTCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIAYQS*PWLLHD
Trigger: ATCATGAAGAAGCCAGGGCCAGGACTGATAGGCTAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCACTGGAGTTATATaGATTGTTGCCACCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSTGVI*IVATCG
Trigger: GCCACAGGTGGCAACAATCCATATAACTCCAGTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGGCATCCAAGTGTCTGTaGCTGAAGGAGAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNEASKCL*LKEKNG
Trigger: TCCATTTTTCTCCTTCAGCCACAGACACTTGGATGC...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGGACATCTCTGCAATaGGGACCAATGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNWTSLQ*GPMSCM
Trigger: CATGCAAGACATTGGTCCCCATTGCAGAGATGTCCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GATTGTCTTTTGTGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTACAGAAAATGTGAACTaGACATCTCTGCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: DCLLWLTNDGYFGLPFVSTENVN*TSLQWG
Trigger: TCCCCATTGCAGAGATGTCCAGTTCACATTTTCTGT...ACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCACAAAAGACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGGAACAGATGGATTaGGTCCATTGTAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVEQMD*VHCSNS
Trigger: GCTGTTGCTACAATGGACCCAATCCATCTGTTCCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAAGGACGCATGAAGTaGAACAGATGGATTGGGTCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKGRMK*NRWIGS
Trigger: GGACCCAATCCATCTGTTCCACTTCATGCGTCCTTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGGCTGGTTGTCTACTaGGTATACCGTGATGTTGAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNWLVVY*VYRDVE
Trigger: CTCAACATCACGGTATACCCAGTAGACAACCAGCCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGCCAGGAGCGTGGTaGTTGTTAAGAAACCTCTAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQPGAW*LLRNLY
Trigger: ATAGAGGTTTCTTAACAACCACCACGCTCCTGGCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGTCTACCTGAATGGTaGATAAAACAGGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGLPEW*IKQVLP
Trigger: GGGAAGAACCTGTTTTATTCACCATTCAGGTAGACC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGGGGTCCATGATTTaGAATTCCACGGTATCTGAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVGSMI*NSTVSE
Trigger: TTCAGATACCGTGGAATTTCAAATCATGGACCCCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp GATTGTCTTTTGTGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTTCATATTCGGTCTGTaGCCATTCAATATGAGACCA +
Preference number: 4 (lower is better)
Translates to: DCLLWLTNDGYFGLPFVSFIFGL*PFNMRP
Trigger: TGGTCTCATATTGAATGGTCACAGACCGAATATGAA...ACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCACAAAAGACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTAATAAAACTCGCTaGTCACTCCTGACAACGCCG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFNKTR*SLLTTP
Trigger: CGGCGTTGTCAGGAGTGATCAGCGAGTTTTATTAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAGGTCAGGATGAACTaGTCCACTTCCAGAATAAAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNEVRMN*STSRIN
Trigger: GTTTATTCTGGAAGTGGATCAGTTCATCCTGACCTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCATTGTCGACAACCTaGAACTGTTCCCAAGTGATG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSLSTT*NCSQVM
Trigger: CATCACTTGGGAACAGTTTCAGGTTGTCGACAATGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCACAACATTGGTTATaGGGAACGGGGGACTATCAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSQHWL*GTGDYH
Trigger: ATGATAGTCCCCCGTTCCTCATAACCAATGTTGTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTAAACAAATCCCTCTaGAGGAAGCCATGGACAGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLNKSL*RKPWTG
Trigger: TCCTGTCCATGGCTTCCTTCAGAGGGATTTGTTTAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCAGCTCTTTCATCTaGCCCTCACACACAGTAATA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSSSFI*PSHTVI
Trigger: TATTACTGTGTGTGAGGGTCAGATGAAAGAGCTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAGGTGAAGCTATCTTaGTTCTGGGAATCCATTGCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKVKLS*FWESIA
Trigger: GGCAATGGATTCCCAGAATCAAGATAGCTTCACCTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR GCA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTTGCTTGAGGCAGTTCTaGCACTTTGATTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSCLRQF*HFDCLL
Trigger: CAAAAGACAATCAAAGTGGCAGAACTGCCTCAAGCA...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp GATTGTCTTTTGTGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTCCTTTAATTCCAGAGTaGAGTTCTTTGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: DCLLWLTNDGYFGLPFVSPLIPE*SSLEMR
Trigger: CCTCATTTCCAAAGAACTGCACTCTGGAATTAAAGG...ACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCACAAAAGACAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATACAGTTACAAGGTTaGCCAGGTATTGTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIQLQG*PGIVPC
Trigger: GCAGGGAACAATACCTGGGCAACCTTGTAACTGTAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTACACTCCACTTTCTTTaGTGGTCTTCTCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSITLHFL*WSSPRQ
Trigger: CTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAGTGT...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTAAAGCAGATCCCATaGAAAGTACCGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLKQIP*KVPPCW
Trigger: CCAACATGGCGGTACTTTGCATGGGATCTGCTTTAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp ACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCATCCTCTCAGAAATTAGAATGTaGTCTGTGCTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: TNDGYFGLPFVSWETVILSEIRM*SVLMML
Trigger: AAGCATCATCAGCACAGAGCACATTCTAATTTCTGA...GAGGATGACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAATTCCAAGTCATCTaGTGCAGTGTCAGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKFQVI*CSVRVS
Trigger: ACTGACCCTGACACTGCAGCAGATGACTTGGAATTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAAGCTGTGAACAGGTaGATGTTTCTGGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKAVNR*MFLVRV
Trigger: AACCCTCACCAGAAACATGCACCTGTTCACAGCTTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCACAATAAAGCCTTaGTTTGTCCCATCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFTIKP*FVPSVA
Trigger: GGCCACAGATGGGACAAACCAAGGCTTTATTGTGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTTCCTTTTGTGAGTTaGGAAACTGTCATCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLPFVS*ETVILQ
Trigger: CTGGAGGATGACAGTTTCCCAACTCACAAAAGGAAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGTTTCCCAACCCTCTaGGTTATTGGCTCATTCATC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSFPTL*VIGSFI
Trigger: GATGAATGAGCCAATAACCCAGAGGGTTGGGAAACT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp TTTTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGGATGATGTTACAGTCTaGTTCCAGGAGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: FSGTHIIMRFGSPTVFCLDDVTV*FQEIDP
Trigger: TGGGTCTATCTCCTGGAACCAGACTGTAACATCATC...CAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGATGATGTTACAGTCTaGTTCCAGGAGATAGACCCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDDVTV*FQEIDP
Trigger: TGGGTCTATCTCCTGGAACCAGACTGTAACATCATC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GATTGTCTTTTGTGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTAGATATAATCAATGTTaGGTGAAGGGGGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: DCLLWLTNDGYFGLPFVSRYNQC*VKGDPD
Trigger: ATCTGGATCCCCCTTCACCCAACATTGATTATATCT...ACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCACAAAAGACAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGATTTGGAGGTTCATaGCTGTCCCACAGGACAAAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRFGGS*LSHRTN
Trigger: ATTTGTCCTGTGGGACAGCCATGAACCTCCAAATCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCCTCTTTTGGAAGCTaGTCATCCACTGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNASFGS*SSTGVI
Trigger: TATAACTCCAGTGGATGACCAGCTTCCAAAAGAGGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCATCCAAGTGTCTGTaGCTGAAGGAGAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNASKCL*LKEKNG
Trigger: TCCATTTTTCTCCTTCAGCCACAGACACTTGGATGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTTGAGATCATACACTaGAAAGGACGCATGAAGTGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVEIIH*KGRMKW
Trigger: CCACTTCATGCGTCCTTTCCAGTGTATGATCTCAAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTATTGCAATGGAAGGTaGCTGGTTGTCTACTGGGTA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNYCNGR*LVVYWV
Trigger: TACCCAGTAGACAACCAGCCACCTTCCATTGCAATA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAGTGGCGGACAAATaGTTAACAGTAAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSVADK*LTVRAV
Trigger: AACAGCCCTTACTGTTAACCATTTGTCCGCCACTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTTTAAAGATGATCTaGTCGTCCTCAGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNILKMI*SSSVSG
Trigger: CCCTGACACTGAGGACGATCAGATCATCTTTAAAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTTCCAACTGCAGCTaGCACTTGGTTGACCTTTAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFSNCS*HLVDLY
Trigger: ATAAAGGTCAACCAAGTGTCAGCTGCAGTTGGAAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTCCACATCTTAGTTaGCATTCCTGGGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIPHLS*HSWVKL
Trigger: CAGTTTGACCCAGGAATGTCAACTAAGATGTGGAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp GAGTTGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATCATTTCCCTTGTCTTTaGACCAAAACACAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ELGNCHPPVSRKLSHDNYHFPCL*TKTQLF
Trigger: AAAGAGCTGTGTTTTGGTTCAAAGACAAGGGAAATG...ATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCTCACAGCTCACTTTaGGGCTTCCTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPHSSL*GFLFSL
Trigger: TAAAGAAAATAGGAAGCCTCAAAGTGAGCTGTGAGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp GAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATTCACAACATTGGTTATaGGGAACGGGGGACTATCAT +
Preference number: 4 (lower is better)
Translates to: ETVILQFQGNYPMIIIDDSQHWL*GTGDYH
Trigger: ATGATAGTCCCCCGTTCCTCATAACCAATGTTGTGA...ATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp TGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATAAGAGTAGGTCATCCTaGAGAACTTCAGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: WETVILQFQGNYPMIIIDKSRSS*RTSVPS
Trigger: TGATGGAACTGAAGTTCTTCAGGATGACCTACTCTT...ATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAGAGTAGGTCATCCTaGAGAACTTCAGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKSRSS*RTSVPS
Trigger: TGATGGAACTGAAGTTCTTCAGGATGACCTACTCTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGCTTTTGTCTTTGTaGCAAGAACTGCATTCACAG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQLLSL*QELHSQ
Trigger: CTGTGAATGCAGTTCTTGGCACAAAGACAAAAGCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGCTTGAGGCAGTTCTaGCACTTTGATTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCLRQF*HFDCLL
Trigger: CAAAAGACAATCAAAGTGGCAGAACTGCCTCAAGCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAATGGGCTTCCCAAGTaGTTTTCTAATCAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNGLPK*FSNQVV
Trigger: CACTACCTGATTAGAAAAGCACTTGGGAAGCCCATT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCCGAGATCTTAACATaGCCCTTTCATTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPEILT*PFHFKV
Trigger: GACTTTGAAATGAAAGGGGCATGTTAAGATCTCGGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAACACGGCCATGAATaGAGCCTTTGGAATCTGATT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKHGHE*SLWNLI
Trigger: AATCAGATTCCAAAGGCTGCATTCATGGCCGTGTTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGGACTGTCATAGGTaGACTCCTTTCAAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVDCHR*TPFKEE
Trigger: TTCTTCTTTGAAAGGAGTGCACCTATGACAGTCCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGAATTTGTGACGGATaGTGTGATGGCCATCAAATA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGICDG*CDGHQI
Trigger: TATTTGATGGCCATCACAGCATCCGTCACAAATTCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCTCTGAGTCATCATaGATGTACGTCAACCTCATT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLSESS*MYVNLI
Trigger: AATGAGGTTGACGTACATGCATGATGACTCAGAGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGGAGACAGTCACCTTaGTCTTGTGTACATAGCAAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNWRQSP*SCVHSK
Trigger: TTTGCTATGTACACAAGAGCAAGGTGACTGTCTCCA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGTGTGAGTCAGTTGTaGATTCCACCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSVSQL*IPPYLL
Trigger: AAGCAGATAAGGTGGAATCCACAACTGACTCACACT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAACCCTCTGGGTTATTaGCTCATTCATCACAACTTC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNPLGY*LIHHNF
Trigger: GAAGTTGTGATGAATGAGCCAATAACCCAGAGGGTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTAGTTTCCCAACCCTCTaGGTTATTGGCTCATTCATC +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSISFPTL*VIGSFI
Trigger: GATGAATGAGCCAATAACCCAGAGGGTTGGGAAACT...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCATGAATGCAGCCTTTaGAATCTGATTCGGAATTCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHECSL*NLIRNS
Trigger: GGAATTCCGAATCAGATTCCAAAGGCTGCATTCATG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAGCTGGTCATCCACTaGAGTTATATGGATTGTTGC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKLVIH*SYMDCC
Trigger: GCAACAATCCATATAACTCCAGTGGATGACCAGCTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACAGAAAATGTGAACTaGACATCTCTGCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTENVN*TSLQWG
Trigger: TCCCCATTGCAGAGATGTCCAGTTCACATTTTCTGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCAACTTGATTGTCCACTaGGAGGATTGTAATGTTAAA +
Preference number: 4 (lower is better)
Translates to: NCIHRGVQNYFKDLIIFLNLIVH*EDCNVK
Trigger: TTTAACATTACAATCCTCCCAGTGGACAATCAAGTT...GAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATGAAGTGGAACAGATaGATTGGGTCCATTGTAGCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNMKWNR*IGSIVA
Trigger: TGCTACAATGGACCCAATCCATCTGTTCCACTTCAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATTCAGTGGCGGACAAATaGTTAACAGTAAGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: ETVILQFQGNYPMIIIDDSVADK*LTVRAV
Trigger: AACAGCCCTTACTGTTAACCATTTGTCCGCCACTGA...ATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGTAAATCTTCTCCCTaGGTGAGTCTTCATCTATGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSKSSP*VSLHLW
Trigger: CCATAGATGAAGACTCACCCAGGGAGAAGATTTACT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCCACTACATCCATTTaGCTGAAGTTTGTAATGGGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPTTSI*LKFVMG
Trigger: TCCCATTACAAACTTCAGCCAAATGGATGTAGTGGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCAATTGGTCTACCTaGATGGTGAATAAAACAGGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSNWST*MVNKTG
Trigger: ACCTGTTTTATTCACCATTCAGGTAGACCAATTGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGTGACCATTCAATATaGGACCACTTCAGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCDHSI*DHFSSK
Trigger: TTTGGAACTGAAGTGGTCTCATATTGAATGGTCACA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCATATTCGGTCTGTaGCCATTCAATATGAGACCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFIFGL*PFNMRP
Trigger: TGGTCTCATATTGAATGGTCACAGACCGAATATGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTCCTGGGTCAAACTaGATCAGTTTAGATGGAATC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIPGSN*ISLDGI
Trigger: GATTCCATCTAAACTGATTCAGTTTGACCCAGGAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTCCTAAGCTTCCTTTaGGAAAGATCTGTAGAATCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVLSFL*ERSVES
Trigger: TGATTCTACAGATCTTTCTCAAAGGAAGCTTAGGAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCATTTCCCTTGTCTTTaGACCAAAACACAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHFPCL*TKTQLF
Trigger: AAAGAGCTGTGTTTTGGTTCAAAGACAAGGGAAATG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCATTGTGAACATACTTaGCTTCGTTGGGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHCEHT*LRWEGN
Trigger: ATTTCCTTCCCAACGAAGTCAAGTATGTTCACAATG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTGGACAACCATTGTaGACATACTTGACTTCGTTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIGQPL*TYLTSL
Trigger: CAACGAAGTCAAGTATGTTCACAATGGTTGTCCAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGTTACTCATATGGATaGTGTTACAGTCTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCYSYG*CYSLVP
Trigger: TGGAACCAGACTGTAACATCATCCATATGAGTAACA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTCTTCATCTATGGCTaGAAGAATAGCACTGGAAAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVFIYG*KNSTGN
Trigger: ATTTCCAGTGCTATTCTTTCAGCCATAGATGAAGAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCTTTAATTCCAGAGTaGAGTTCTTTGGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPLIPE*SSLEMR
Trigger: CCTCATTTCCAAAGAACTGCACTCTGGAATTAAAGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGATACAGCTTCTGGATaGCTTCTTCAAAATGGAAGA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDTASG*LLQNGR
Trigger: TCTTCCATTTTGAAGAAGGCATCCAGAAGCTGTATC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCACACAGTAATATTCTaGACTACAAAGTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHTVIF*TTKSGA
Trigger: AGCTCCTGACTTTGTAGTGCAGAATATTACTGTGTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp GAGTTGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATTCTATAAACAGAGGATaGACGAACTGTTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: ELGNCHPPVSRKLSHDNYSINRG*TNCFAI
Trigger: AATGGCAAAACAGTTCGTCCATCCTCTGTTTATAGA...ATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGATATAATCAATGTTaGGTGAAGGGGGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRYNQC*VKGDPD
Trigger: ATCTGGATCCCCCTTCACCCAACATTGATTATATCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAAGTACCGCCATGTTaGTTACTGACAGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKVPPC*LLTENV
Trigger: CACATTTTCTGTCAGTAACCAACATGGCGGTACTTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAATTCCACGGTATCTaGATTTACTTCCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKFHGI*IYFQRW
Trigger: CCATCTTTGGAAGTAAATTCAGATACCGTGGAATTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp TGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATAAATTCCACGGTATCTaGATTTACTTCCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: WETVILQFQGNYPMIIIDKFHGI*IYFQRW
Trigger: CCATCTTTGGAAGTAAATTCAGATACCGTGGAATTT...ATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR TCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTGTCTTTTGTGGCTaGCTAATGATGGATACTTTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIVFCG*LMMDTL
Trigger: CAAAGTATCCATCATTAGTCAGCCACAAAAGACAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR TCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTATTGGACAACCATTGTaGACATACTTGACTTCGTTG +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSIIGQPL*TYLTSL
Trigger: CAACGAAGTCAAGTATGTTCACAATGGTTGTCCAAT...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAGAAATTAGAATGTaGTCTGTGCTGATGATGCTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSEIRM*SVLMML
Trigger: AAGCATCATCAGCACAGAGCACATTCTAATTTCTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAATTTCAGCCTTCTTaGTCAGCATTGGTTTTTCAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQFQPS*SALVFH
Trigger: ATGAAAAACCAATGCTGAGCAAGAAGGCTGAAATTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCACCCATATTCATTaGAATTTCAGCCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFTHIH*NFSLLA
Trigger: AGCAAGAAGGCTGAAATTGCAATGAATATGGGTGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCTATAAACAGAGGATaGACGAACTGTTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSINRG*TNCFAI
Trigger: AATGGCAAAACAGTTCGTCCATCCTCTGTTTATAGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATGCCTTCTTCAAAATaGAAGAGTCCCTTTAATTCC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNMPSSK*KSPFNS
Trigger: GGAATTAAAGGGACTCTTCCATTTTGAAGAAGGCAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCATAATTATGAGGTTTaGCTCTCCTACAGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHNYEV*LSYSLL
Trigger: CAAAAGACTGTAGGAGAGCCAAACCTCATAATTATG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTAGACACCACGAGTaGTTTTGTAAGGATGACAAT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFRHHE*FCKDDN
Trigger: ATTGTCATCCTTACAAAACCACTCGTGGTGTCTAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR GCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCGTCATAGGTAATTaGTATATTCCACATCTTAGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSVIGN*YIPHLS
Trigger: ACTAAGATGTGGAATATAGCAATTACCTATGACGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGAATCAGTTTAGATaGAATCACGGTGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLNQFR*NHGEIF
Trigger: AAAGATTTCACCGTGATTCCATCTAAACTGATTCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTGATTGTCTTTTGTaGCTGACTAATGATGGATAC +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFDCLL*LTNDGY
Trigger: GTATCCATCATTAGTCAGCCACAAAAGACAATCAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACATTGTTACTCATATaGATGATGTTACAGTCTGGT +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTLLLI*MMLQSG
Trigger: ACCAGACTGTAACATCATCCATATGAGTAACAATGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTTTATCAATCGCTTaGGACAAGCCATTGAATTCA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFLSIA*DKPLNS
Trigger: TGAATTCAATGGCTTGTCCCAAGCGATTGATAAAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAACTTGATTGTCCACTaGGAGGATTGTAATGTTAAA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNLIVH*EDCNVK
Trigger: TTTAACATTACAATCCTCCCAGTGGACAATCAAGTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAATATTGTCCAGCTTaGTATCTGCATCAGAAATTA +
Preference number: 4 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQYCPA*YLHQKL
Trigger: TAATTTCTGATGCAGATACCAAGCTGGACAATATTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTTTTGATTGTCTTTTGTaGCTGACTAATGATGGATAC +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSIFDCLL*LTNDGY
Trigger: GTATCCATCATTAGTCAGCCACAAAAGACAATCAAA...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CCA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTTTTTTATCAATCGCTTaGGACAAGCCATTGAATTCA +
Preference number: 4 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSIFLSIA*DKPLNS
Trigger: TGAATTCAATGGCTTGTCCCAAGCGATTGATAAAAA...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
34% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS CCA 90 bp AGGTTCTTCTGGTCGAGGCTCCCCGAGAACCATCTGGCCATGGGCTaGCAGCCGAGTTCTCGCAGTGTCCAGGCTGACGGTACATTCCAG +
Preference number: 5 (lower is better)
Translates to: RFFWSRLPENHLAMG*QPSSRSVQADGTFQ
Trigger: CTGGAATGTACCGTCAGCCTGGACACTGCGAGAACTCGGCTGCCAGCCCATGGCCAGATGGTTCTCGGGGAGCCTCGACCAGAAGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 90 bp ACAGGTAGAGCTGGCCATGCTGGGGGAGCTGAACCAAGAGGAAGGTaGGGTTCTCCGCAGGTGTATCAGGGTCGGTCAGCTGAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: TGRAGHAGGAEPRGR*GSPQVYQGRSAEGG
Trigger: ACCTCCTTCAGCTGACCGACCCTGATACACCTGCGGAGAACCTCACCTTCCTCTTGGTTCAGCTCCCCCAGCATGGCCAGCTCTACCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000466679.1
ENST00000485068.5
CDS CCA 90 bp CATGATAAAGATGCCTTCTACTGTTTACACAGAGCCCGACCTCCCTaGCGGACAGCCACCGCTAGCCCCGTGCCTTCTGCTGGTTGGGTC +
Preference number: 5 (lower is better)
Translates to: HDKDAFYCLHRARPP*RTATASPVPSAGWV
Trigger: GACCCAACCAGCAGAAGGCACGGGGCTAGCGGTGGCTGTCCGCCAGGGAGGTCGGGCTCTGTGTAAACAGTAGAAGGCATCTTTATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS TCA 90 bp GCCCCGGTGTGTGTGTATCTCAGCAAGTTCAGATCCACTTCCTCCTaGGTGCATTTCATGCCAGGGGAGAGAGGAACCCAGTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: APVCVYLSKFRSTSS*VHFMPGERGTQSLP
Trigger: AGGGAGGGACTGGGTTCCTCTCTCCCCTGGCATGAAATGCACTCAGGAGGAAGTGGATCTGAACTTGCTGAGATACACACACACCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000497634.2
CDS-3UTR CAA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATATTGTTCCCTGCAAGCTaGGGCAGCCGCATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: RTFSHQCPRATACAAWRILFPAS*GSRIPG
Trigger: ACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAA...TATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS TCA 90 bp CTGAGTGCCGATAGGCCACATTCTTGCTGTCCACATCCTGCTGGGTaGAATTGTGTTGAAGTAGCCCTGTCCCCCACAGGTAGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: LSADRPHSCCPHPAG*NCVEVALSPTGRAG
Trigger: GCCAGCTCTACCTGTGGGGGACAGGGCTACTTCAACACAATTTCACCCAGCAGGATGTGGACAGCAAGAATGTGGCCTATCGGCACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000485068.5
CDS GCA 90 bp CTCCACTTTCTTTGCTGGTCTTCTCCAAGGCAGCTGCTGCAGCTTTaGAAACTTCCTGAGCGCCAAGCCTCAGGACTCCCTGTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: LHFLCWSSPRQLLQL*KLPERQASGLPVRR
Trigger: CCTTCTCACAGGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS CCA 90 bp TTAGGGATGGCAAACTTCAGGTCATCTCCTGACAGGAAGGCAGAGTaGCCCTTCATCACCCTCACCCCGCGGTTGATGCTGATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LGMANFRSSPDRKAE*PFITLTPRLMLMKV
Trigger: CACCTTCATCAGCATCAACCGCGGGGTGAGGGTGATGAAGGGCCACTCTGCCTTCCTGTCAGGAGATGACCTGAAGTTTGCCATCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AGTGCTGGTGCCACCCGGCTGGACAGGATTTGTCTTCCACATCCTTGGTTTGGGTTTCAGGAGCCCCACTaGAGAAGGGGAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: SAGATRLDRICLPHPWFGFQEPH*RRGMQE
Trigger: CTCTTGCATTCCCCTTCTCAAGTGGGGCTCCTGAAA...CCCAAACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGGGTGGCACCAGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR CAA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCGTCACTTTCAGAGGGTaGGTGAACGCCTCAGGAACT +
Preference number: 5 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTVTFRG*VNASGT
Trigger: AGTTCCTGAGGCGTTCACCAACCCTCTGAAAGTGAC...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TCTTCCACATCCTTGGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACGCCATGGCGTGGCTTTaGAGTGATGCTGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: SSTSLVWGLQAFQAIPLHAMAWL*SDAEQQ
Trigger: CTGCTGTTCAGCATCACTCAAAAGCCACGCCATGGC...GTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS TCA 90 bp ATCTGTGGCCATGAAAGTAAAGCAGTCAGTCTGGGAGTCCCCTCCTaGGTGCCGATAGGCCACATTCTTGCTGTCCACATCCTGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ICGHESKAVSLGVPS*VPIGHILAVHILLG
Trigger: ACCCAGCAGGATGTGGACAGCAAGAATGTGGCCTATCGGCACTCAGGAGGGGACTCCCAGACTGACTGCTTTACTTTCATGGCCACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000485068.5
CDS TCA 90 bp ACGGTGACTAGCCGGACAGCACCAATGTCGTCATTGTCGACAACCTaGAACTGTTCCCAAGTGATGGCTCGAGACTGCCCCTCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: TVTSRTAPMSSLSTT*NCSQVMARDCPSRR
Trigger: TCTCCTTGAGGGGCAGTCTCGAGCCATCACTTGGGAACAGTTTCAGGTTGTCGACAATGACGACATTGGTGCTGTCCGGCTAGTCACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 90 bp GGCAGGGCTCTGTCCACAGTCTCCAGTGTGATCTCAAACACCCCGTaGTCGGTCCGCAGTCCATTGCTGATGATGAATCTGGTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: GRALSTVSSVISNTP*SVRSPLLMMNLVKR
Trigger: TCTCTTTACCAGATTCATCATCAGCAATGGACTGCGGACCGAGCACGGGGTGTTTGAGATCACACTGGAGACTGTGGACAGAGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380894.5
ENST00000485068.5
CDS GCA 90 bp CATACACACTCCACTTTCTTTGCTGGTCTTCTCCAAGGCAGCTGCTaGAGCTTTGCAAACTTCCTGAGCGCCAAGCCTCAGGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: HTHSTFFAGLLQGSC*SFANFLSAKPQDSL
Trigger: CAGGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAGTGTGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS GCA 90 bp GGCAGGGCTCTGTCCACAGTCTCCAGTGTGATCTCAAACACCCCGTaGTCGGTCCGCAGTCCATTGCTGATGATGAATCTGAATCTGTCA +
Preference number: 5 (lower is better)
Translates to: GRALSTVSSVISNTP*SVRSPLLMMNLNLS
Trigger: TGACAGATTCAGATTCATCATCAGCAATGGACTGCGGACCGAGCACGGGGTGTTTGAGATCACACTGGAGACTGTGGACAGAGCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000466679.1
CDS GCA 90 bp CTCCACTTTCTTTGCTGGTCTTCTCCAAGGCAGCTGCTGCAGCTTTaGAAACTTCCTGAGCGCCAAGCCTCAGGACTCCACAGACTCTTC +
Preference number: 5 (lower is better)
Translates to: LHFLCWSSPRQLLQL*KLPERQASGLHRLF
Trigger: GAAGAGTCTGTGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAATTCCACATCCTTGGTTaGGGGACTCCAGGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: FPASLGSRIPGAFLLCDQFHILG*GTPGFP
Trigger: TGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAA...TTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp GGTTTGGGGACTCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGCCGGCTGGACAGGATTaGTCTTCCACATCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GLGTPGFPGDPIALIQLLPAGQD*SSTSLV
Trigger: AACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGG...CAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGAGTCCCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAGGCCCTCTTCTCCCATaGGTGAAGGCAACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKGPLLP*VKATGS
Trigger: TGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCC...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp CCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTCAAAATGGAAACCCTCACCCCGCGGTaGATGCTGATGAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PGDPIALIQLLDAFFKMETLTPR*MLMKVG
Trigger: CCCCACCTTCATCAGCATCAACCGCGGGGTGAGGGT...TTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGGAACGCCTCAGGAACTaGATTGTCCACTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LQGCPGIVPCKLGQPHSRERLRN*IVHWED
Trigger: ATCCTCCCAGTGGACAATCAAGTTCCTGAGGCGTTC...CCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS TCA 90 bp GATCGTCCTCAGTGTCAGGGTCTGATGCCTTCAACACGCGGGAAGTaGTGTAAATCCCGTAGCAGCCATTTTTCAGGAGCCCCACTTGAG +
Preference number: 5 (lower is better)
Translates to: DRPQCQGLMPSTRGK*CKSRSSHFSGAPLE
Trigger: CTCAAGTGGGGCTCCTGAAAAATGGCTGCTACGGGATTTACATCACTTCCCGCGTGTTGAAGGCATCAGACCCTGACACTGAGGACGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS TCA 90 bp TTGCTGGTCTTCTCCAAGGCAGCTGCTGCAGCTTTGCAAACTTCCTaGGCGCCAAGCCTCAGGACTCCACAGACTCTTCCAACACACTTT +
Preference number: 5 (lower is better)
Translates to: LLVFSKAAAAALQTS*APSLRTPQTLPTHF
Trigger: AAAGTGTGTTGGAAGAGTCTGTGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS GCA 90 bp TCCACATCTGAAGCTCGCAGCATGGATCCCTGGATCAGGATGGTCTaGCCCTCCTCCAGTTCAATCACAACATTGGTTATGAGGAACGGG +
Preference number: 5 (lower is better)
Translates to: STSEARSMDPWIRMV*PSSSSITTLVMRNG
Trigger: CCCGTTCCTCATAACCAATGTTGTGATTGAACTGGAGGAGGGGCAGACCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAGATGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 90 bp GTGCCCCCTGAATTTAGAGGAAATCCATTCAGCTCCACCCTTCCGTaGAGAGGCAATTCCCGCAGGGAGAGGTCAATATTGTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: VPPEFRGNPFSSTLP*RGNSRRERSILSSL
Trigger: CAAGCTGGACAATATTGACCTCTCCCTGCGGGAATTGCCTCTGCACGGAAGGGTGGAGCTGAATGGATTTCCTCTAAATTCAGGGGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 90 bp CGGTGTGTGTGTATCTCAGCAAGTTCAGATCCACTTCCTCCTGAGTaGATTTCATGCCAGGGGAGAGAGGAACCCAGTCCCTCCCTATCT +
Preference number: 5 (lower is better)
Translates to: RCVCISASSDPLPPE*ISCQGREEPSPSLS
Trigger: AGATAGGGAGGGACTGGGTTCCTCTCTCCCCTGGCATGAAATGCACTCAGGAGGAAGTGGATCTGAACTTGCTGAGATACACACACACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000497634.2
CDS GCA 90 bp CATACACACTCCACTTTCTTTGCTGGTCTTCTCCAAGGCAGCTGCTaGAGCTTTGCAAACTTCCTGAGCGCCAAGCCTCAGGACTCCACA +
Preference number: 5 (lower is better)
Translates to: HTHSTFFAGLLQGSC*SFANFLSAKPQDST
Trigger: TGTGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAGTGTGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS CCA 90 bp AGAAGATGTAGTCATCACTGGCGTCCACATCTGAAGCTCGCAGCATaGATCCCTGGATCAGGATGGTCTGCCCCTCCTCCAGTTCAATCA +
Preference number: 5 (lower is better)
Translates to: RRCSHHWRPHLKLAA*IPGSGWSAPPPVQS
Trigger: TGATTGAACTGGAGGAGGGGCAGACCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAGATGTGGACGCCAGTGATGACTACATCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp TTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGCTTCAGTTCCAAAATTaGAGGAGTGGCCGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: LQGCPGIVPCKLGQPHSRLQFQN*RSGRVP
Trigger: GGGAACTCGGCCACTCCTCAAATTTTGGAACTGAAG...CCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR CAA 90 bp TATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGCCAGAGTGCAGTTCTTaGGAAATGAGGGCAACTGGT +
Preference number: 5 (lower is better)
Translates to: YCSLQAWAAAFQVPFCSVPECSS*EMRATG
Trigger: ACCAGTTGCCCTCATTTCCAAAGAACTGCACTCTGG...CACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp AGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACCAGAGTGCAGTTCTTaGGAAATGAGGGCAACTGGT +
Preference number: 5 (lower is better)
Translates to: RTFSHQCPRATACAAWRIPECSS*EMRATG
Trigger: ACCAGTTGCCCTCATTTCCAAAGAACTGCACTCTGG...TATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp CACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTTCCACATCCTTGGTTaGGGGACTCCAGGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: HQCPRATACAAWRIQLQGFHILG*GTPGFP
Trigger: TGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAA...ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp TCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGATCAAGCACGCACTCTCTGACTaGTACACAATTTTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: SLQAWAAAFQVPFCSVIKHALSD*YTILLL
Trigger: CAGGAGCAAAATTGTGTACAAGTCAGAGAGTGCGTG...CTTGATCACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp GATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGAGGGGGACTATCATCTTaGGGCAAGACGTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: DPLPVASMHLVVQTYPKGGGLSS*GKTLMG
Trigger: CCCCATCAACGTCTTGCCCAAAGATGATAGTCCCCC...TCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCTGTGCTGATGATGCTTaGACCTCCCTCAGTCACTTT +
Preference number: 5 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTCADDA*TSLSHF
Trigger: AAAGTGACTGAGGGAGGTCAAAGCATCATCAGCACA...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp AAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACTGGTGGCTCATCGTaGACAGGGAATACCTCAACA +
Preference number: 5 (lower is better)
Translates to: KDFLPPMSQSHRMCCLENTGGSS*TGNTST
Trigger: TGTTGAGGTATTCCCTGTCAACGATGAGCCACCAGT...ATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCTCGCCACCTGTGTGTTaGTATGTCACGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFSPPVC*YVTASE
Trigger: CTCAGAGGCCGTGACATACAAACACACAGGTGGCGA...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCATGGAAGGTGGCTGGTaGTCTACTGGGTATACCGTG +
Preference number: 5 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSMEGGW*STGYTV
Trigger: CACGGTATACCCAGTAGACAACCAGCCACCTTCCAT...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CTTGGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCTTCCTTAAGCTGAAGTaGCCCATTTTGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: LGALRGPSSPIGEGNRFTFLKLK*PILGKP
Trigger: AGGCTTCCCCAAAATGGGCAACTTCAGCTTAAGGAA...GGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCATACGAGGAGCTGTTTaGTCCAATTGGTCTACTGTG +
Preference number: 5 (lower is better)
Translates to: PRYCSLQAWAAAFQVPFCIRGAV*SNWSTV
Trigger: CACAGTAGACCAATTGGACAAAACAGCTCCTCGTAT...GCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS TCA 90 bp CAGCACCAATGTCGTCATTGTCGACAACCTGAAACTGTTCCCAAGTaGTGGCTCGAGACTGCCCCTCAAGGAGACTCAGACCTGTATTCC +
Preference number: 5 (lower is better)
Translates to: QHQCRHCRQPETVPK*WLETAPQGDSDLYS
Trigger: GGAATACAGGTCTGAGTCTCCTTGAGGGGCAGTCTCGAGCCATCACTTGGGAACAGTTTCAGGTTGTCGACAATGACGACATTGGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp GCCTATCAGTCCTGGCCCTGGCTTCTTCATGATCTCCCCAGCCTGTaGAGGCTTTGTGATATTGAAGAAGATGTAGTCATCACTGGCGTC +
Preference number: 5 (lower is better)
Translates to: AYQSWPWLLHDLPSL*RLCDIEEDVVITGV
Trigger: GACGCCAGTGATGACTACATCTTCTTCAATATCACAAAGCCTCCACAGGCTGGGGAGATCATGAAGAAGCCAGGGCCAGGACTGATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGCAGCTGACACTTGGTaGACCTTTATACCCACAAAG +
Preference number: 5 (lower is better)
Translates to: RYCSLQAWAAAFQVPFCSAADTW*TFIPTK
Trigger: CTTTGTGGGTATAAAGGTCAACCAAGTGTCAGCTGC...AGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS-3UTR CAA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTGATGGACGAACTGTTTaGCCATTCCCACGGGTCCTA +
Preference number: 5 (lower is better)
Translates to: SRLSRRSHCTDTASGCLLDGRTV*PFPRVL
Trigger: TAGGACCCGTGGGAATGGCAAAACAGTTCGTCCATC...AAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCTTGTCTTCCACATCCTaGGTTTGGGGACTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: PPHVLPGEYSYKVAQVLFLSSTS*VWGLQA
Trigger: AGCCTGGAGTCCCCAAACCAAGGATGTGGAAGACAA...GAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCTCCTCACAGCTCACTTaGAGGCTTCCTATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTSSQLT*RLPIFF
Trigger: AAAGAAAATAGGAAGCCTCAAAGTGAGCTGTGAGGA...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp GGAGCGTTGAGAGGGCCCTCTTCTCCCATTGGTGAAGGCAACAGGTTCACCACCCAAAGTACCGCCATGTaGGTTACTGACAGAAAATGT +
Preference number: 5 (lower is better)
Translates to: GALRGPSSPIGEGNRFTTQSTAM*VTDRKC
Trigger: ACATTTTCTGTCAGTAACCAACATGGCGGTACTTTG...GGTGGTGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCCCTCTCAACGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp GCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGAGCTGTTTTGTCCAATaGGTCTACTGTGTTCACGAT +
Preference number: 5 (lower is better)
Translates to: AQVLFPASLGSRIPGAFLSCFVQ*VYCVHD
Trigger: ATCGTGAACACAGTAGACCAATTGGACAAAACAGCT...CAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATACCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS TCA 90 bp CTTTGTGATATTGAAGAAGATGTAGTCATCACTGGCGTCCACATCTaGAGCTCGCAGCATGGATCCCTGGATCAGGATGGTCTGCCCCTC +
Preference number: 5 (lower is better)
Translates to: LCDIEEDVVITGVHI*SSQHGSLDQDGLPL
Trigger: GAGGGGCAGACCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAGATGTGGACGCCAGTGATGACTACATCTTCTTCAATATCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 90 bp CATCAGGCCAATCTCGCCACCTGTGTGTTTGTATGTCACGGCCTCTaGGATAACATCTCTCTGAGAGAACTGATCCACTGTGACTCCAGC +
Preference number: 5 (lower is better)
Translates to: HQANLATCVFVCHGL*DNISLRELIHCDSS
Trigger: GCTGGAGTCACAGTGGATCAGTTCTCTCAGAGAGATGTTATCTCAGAGGCCGTGACATACAAACACACAGGTGGCGAGATTGGCCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 90 bp AGTCAAGAGCAGGGGACCTGTTGTTGCCATCCCAAAGGTAGAAGGTaGAGCTATCTTGATTCTGGGAATCCATTGCCCCGGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: SQEQGTCCCHPKGRR*SYLDSGNPLPRCVC
Trigger: ACACACACACCGGGGCAATGGATTCCCAGAATCAAGATAGCTTCACCTTCTACCTTTGGGATGGCAACAACAGGTCCCCTGCTCTTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000466679.1
ENST00000497634.2
CDS-3UTR CAA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGACTGCAGCTTTTGTCTTaGTGCCAAGAACTGCATTCA +
Preference number: 5 (lower is better)
Translates to: KRTFSHQCPRATACAAWRLQLLS*CQELHS
Trigger: TGAATGCAGTTCTTGGCACAAAGACAAAAGCTGCAG...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTGGAAGTGTGAGTCAGTaGTGGATTCCACCTTATCTG +
Preference number: 5 (lower is better)
Translates to: HQCPRATACAAWRIQLQGGSVSQ*WIPPYL
Trigger: CAGATAAGGTGGAATCCACAACTGACTCACACTTCC...ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCGGCACCTCCAGCACATaGTTACTCATATGGATGATG +
Preference number: 5 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSGTSST*LLIWMM
Trigger: CATCATCCATATGAGTAACAATGTGCTGGAGGTGCC...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGGACTTGTACACAATTTaGCTCCTGGTATCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: YCSLQAWAAAFQVPFCSVDLYTI*LLVSVR
Trigger: CCTCACAGATACCAGGAGCAAAATTGTGTACAAGTC...CACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTTTCAGAATGGCTGCTGTTaGGTGGCTGATAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: HSQWPACTWSFKPIQKDFQNGCC*VADRRS
Trigger: AGATCGCCTATCAGCCACCAAACAGCAGCCATTCTG...AAAGTCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TATTGTTCCCTGCAAGCTTGGGCAGCCGCATTCCAGGTGCCTTTCTGCTCTGTGGAGTTATATGGATTGTaGCCACCTGTGGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: YCSLQAWAAAFQVPFCSVELYGL*PPVALK
Trigger: TTTCAGTGCCACAGGTGGCAACAATCCATATAACTC...CACAGAGCAGAAAGGCACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TCCAGGCTTTCCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTCTGGAGTTATATGGATaGTTGCCACCTGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: SRLSRRSHCTDTASGCLLLELYG*LPPVAL
Trigger: CAGTGCCACAGGTGGCAACAATCCATATAACTCCAG...AAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGGAAAGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCCACCTCAGTTTCCTaGACAACCAAATGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: PHVLPGEYSYKVAQVLFPATSVS*TTKCRE
Trigger: TTCTCGGCATTTGGTTGTCAAGGAAACTGAGGTGGC...AGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS TCA 90 bp AGTGTCAGGGTCAGTGGCGGACAAATGGTTAACAGTAAGGGCTGTTaGGCAGCCCTCATCTACAACAAACACGGGACCTATTGCAATGGA +
Preference number: 5 (lower is better)
Translates to: SVRVSGGQMVNSKGC*AALIYNKHGTYCNG
Trigger: TCCATTGCAATAGGTCCCGTGTTTGTTGTAGATGAGGGCTGCTCAACAGCCCTTACTGTTAACCATTTGTCCGCCACTGACCCTGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp TGCTGTGATGGCCATCAAATATCCGGAAGACCACGAAGTCTTTGGTaGAGTCGCTGTCATCATGATGATAGCGAACAACTCCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: CCDGHQISGRPRSLW*SRCHHDDSEQLQPG
Trigger: TCCAGGCTGGAGTTGTTCGCTATCATCATGATGACAGCGACTCCACCAAAGACTTCGTGGTCTTCCGGATATTTGATGGCCATCACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp GGATGCTGTGATGGCCATCAAATATCCGGAAGACCACGAAGTCTTTaGTGGAGTCGCTGTCATCATGATGATAGCGAACAACTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GCCDGHQISGRPRSL*WSRCHHDDSEQLQP
Trigger: AGGCTGGAGTTGTTCGCTATCATCATGATGACAGCGACTCCACCAAAGACTTCGTGGTCTTCCGGATATTTGATGGCCATCACAGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGGCCCACGGCCCCTaGGGCCAGTCTCAACCCCTT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQAHGP*GQSQPL
Trigger: AAGGGGTTGAGACTGGCCCAAGGGGCCGTGGGCCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp GATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGGACTGTGCTTGCTTTGGTaGGAGGAATATGAAGGATGG +
Preference number: 5 (lower is better)
Translates to: DPLPVASMHLVVQTYPKGLCLLW*EEYEGW
Trigger: CCATCCTTCATATTCCTCCAACCAAAGCAAGCACAG...TCCTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTGGTCCTAAGCTTCCTTaGAGAAAGATCTGTAGAATC +
Preference number: 5 (lower is better)
Translates to: LSPTNVPEPPHVLPGEYSGPKLP*RKICRI
Trigger: GATTCTACAGATCTTTCTCAAAGGAAGCTTAGGACC...ACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTAATACAGTTACAAGGTaGCCCAGGTATTGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: HQCPRATACAAWRIQLQGNTVTR*PRYCSL
Trigger: CAGGGAACAATACCTGGGCAACCTTGTAACTGTATT...ACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAATACAGTTACAAGGTaGCCCAGGTATTGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKNTVTR*PRYCSL
Trigger: CAGGGAACAATACCTGGGCAACCTTGTAACTGTATT...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp GGAAATGAGGGCAACTGGTCCTGTCTGGGGAAGTGTGAGTCAGTTGTGGATTCCCTCTCCTACAGTCTTTaGTTTGCCATTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: GNEGNWSCLGKCESVVDSLSYSL*FAISLV
Trigger: GACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAG...GGAATCCACAACTGACTCACACTTCCCCAGACAGGACCAGTTGCCCTCATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAACTCTCCTACAGTCTTTaGTTTGCCATTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKLSYSL*FAISLV
Trigger: GACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAG...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTAAGACCACGAAGTCTTaGGTGGAGTCGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: CCLENTVTRLPRYCSLQAKTTKS*VESLSS
Trigger: TGATGACAGCGACTCCACCAAAGACTTCGTGGTCTT...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS TCA 90 bp GGTATCTGTGAGGTCCAGTTGGATGGAGATATAATCAATGTTGGGTaGAGGGGGATCCAGATGCTGATAACGAAGGCCCATCAGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GICEVQLDGDIINVG*RGIQMLITKAHQQE
Trigger: TTCCTGCTGATGGGCCTTCGTTATCAGCATCTGGATCCCCCTTCACCCAACATTGATTATATCTCCATCCAACTGGACCTCACAGATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 90 bp CCTCATTCCAGTCTTGAGGAGTTCCATGGAAAAGCTGTGAACAGGTaGATGTTTCTGGTGAGGGTTGGCTGGCTGCTTATTCTCAGAGAA +
Preference number: 5 (lower is better)
Translates to: PHSSLEEFHGKAVNR*MFLVRVGWLLILRE
Trigger: TTCTCTGAGAATAAGCAGCCAGCCAACCCTCACCAGAAACATGCACCTGTTCACAGCTTTTCCATGGAACTCCTCAAGACTGGAATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp TTGACAACCAAATGCCGAGAAACTCCAGGAGCCTCTTTTGGAAGCTaGTCATCCACTGGAGTTATATGGATTGTTGCCACCTGTGGCACT +
Preference number: 5 (lower is better)
Translates to: LTTKCRETPGASFGS*SSTGVIWIVATCGT
Trigger: AGTGCCACAGGTGGCAACAATCCATATAACTCCAGTGGATGACCAGCTTCCAAAAGAGGCTCCTGGAGTTTCTCGGCATTTGGTTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp GTGATGCTTCCCATCTGTGACGTACACCGTGAACTGGTCGGCAGTTaGTTCTATCCTCAGATGCCTGGACTGCACATAGTTAATGTGAAA +
Preference number: 5 (lower is better)
Translates to: VMLPICDVHRELVGS*FYPQMPGLHIVNVK
Trigger: TTTCACATTAACTATGTGCAGTCCAGGCATCTGAGGATAGAACCAACTGCCGACCAGTTCACGGTGTACGTCACAGATGGGAAGCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp ACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATACAGCACTTTGATTGTCTTTaGTGGCTGACTAATGATGGA +
Preference number: 5 (lower is better)
Translates to: TFSHQCPRATACAAWRIQHFDCL*WLTNDG
Trigger: TCCATCATTAGTCAGCCACAAAAGACAATCAAAGTG...CTGTATTCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTTCCACCTTATCTGCTaGAGGCAGTTCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: CCLENTVTRLPRYCSLQAFHLIC*RQFCHF
Trigger: AAAGTGGCAGAACTGCCTCAAGCAGATAAGGTGGAA...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp AACTCCAGGTGGCCCCCTGTAGGGTCTGTTATATTTAGAGTTTTCTGGAACACACCGGCTGGACAGGATTaGTCTTCCACATCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: NSRWPPVGSVIFRVFWNTPAGQD*SSTSLV
Trigger: AACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGG...TGTGTTCCAGAAAACTCTAAATATAACAGACCCTACAGGGGGCCACCTGGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TGGCTGACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCAAGGTTGCCCAGGTATaGTTCCCTGCAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: WLTNDGYFGLPFVSWETVKVAQV*FPASLG
Trigger: GCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTT...GACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGTCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp CCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTAGTTCAATCACAACATaGGTTATGAGGAACGGGGGA +
Preference number: 5 (lower is better)
Translates to: PHVLPGEYSYKVAQVLFPSSITT*VMRNGG
Trigger: TCCCCCGTTCCTCATAACCAATGTTGTGATTGAACT...AGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CAGAGCCACCGCATGTGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATATTTCTTTGCATTTTTaGGACCTCCTGACTGCCAAG +
Preference number: 5 (lower is better)
Translates to: QSHRMCCLENTVTRLPRYISLHF*DLLTAK
Trigger: CTTGGCAGTCAGGAGGTCCAAAAAATGCAAAGAAAT...ATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCACATGCGGTGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427623.5
CDS TCA 90 bp GCCACGCACTCTCTGACTTGTACACAATTTTGCTCCTGGTATCTGTaGGGTCCAGTTGGATGGAGATATAATCAATGTTGGGTGAAGGGG +
Preference number: 5 (lower is better)
Translates to: ATHSLTCTQFCSWYL*GPVGWRYNQCWVKG
Trigger: CCCCTTCACCCAACATTGATTATATCTCCATCCAACTGGACCTCACAGATACCAGGAGCAAAATTGTGTACAAGTCAGAGAGTGCGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 90 bp CACCAGCAAGGGTTTAGGGGTCTCATCTTCTTCACAGTCCAGAACTaGTGTAGTCAAGGAGGTCAGGATGAACTGATCCACTTCCAGAAT +
Preference number: 5 (lower is better)
Translates to: HQQGFRGLIFFTVQN*CSQGGQDELIHFQN
Trigger: ATTCTGGAAGTGGATCAGTTCATCCTGACCTCCTTGACTACATCAGTTCTGGACTGTGAAGAAGATGAGACCCCTAAACCCTTGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 90 bp GTATCTGCATCAGAAATTAGAATGTGCTCTGTGCTGATGATGCTTTaGCCTCCCTCAGTCACTTTCAGAGGGTTGGTGAACGCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: VSASEIRMCSVLMML*PPSVTFRGLVNASG
Trigger: TCCTGAGGCGTTCACCAACCCTCTGAAAGTGACTGAGGGAGGTCAAAGCATCATCAGCACAGAGCACATTCTAATTTCTGATGCAGATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 90 bp ATCCCAAAGGTAGAAGGTGAAGCTATCTTGATTCTGGGAATCCATTaGCCCGGTGTGTGTGTATCTCAGCAAGTTCAGATCCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: IPKVEGEAILILGIH*PGVCVSQQVQIHFL
Trigger: GAGGAAGTGGATCTGAACTTGCTGAGATACACACACACCGGGGCAATGGATTCCCAGAATCAAGATAGCTTCACCTTCTACCTTTGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000466679.1
ENST00000497634.2
CDS CCA 90 bp CAATTCTACCTCATCATGTCTCCTCTCAGAATGGCTGCTGTTTGGTaGCTGATAGGCGATCTGCATGTCACTGAGATCTTTCCAGGTGAA +
Preference number: 5 (lower is better)
Translates to: QFYLIMSPLRMAAVW*LIGDLHVTEIFPGE
Trigger: TTCACCTGGAAAGATCTCAGTGACATGCAGATCGCCTATCAGCCACCAAACAGCAGCCATTCTGAGAGGAGACATGATGAGGTAGAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp AGTTTCCTTGACAACCAAATGCCGAGAAACTCCAGGAGCCTCTTTTaGAAGCTGGTCATCCACTGGAGTTATATGGATTGTTGCCACCTG +
Preference number: 5 (lower is better)
Translates to: SFLDNQMPRNSRSLF*KLVIHWSYMDCCHL
Trigger: CAGGTGGCAACAATCCATATAACTCCAGTGGATGACCAGCTTCCAAAAGAGGCTCCTGGAGTTTCTCGGCATTTGGTTGTCAAGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp GATGTTGAGATCATACACTGGAAAGGACGCATGAAGTGGAACAGATaGATTGGGTCCATTGTAGCAACAGCCATTCACAAAAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: DVEIIHWKGRMKWNR*IGSIVATAIHKRAS
Trigger: GCTGGCCCTTTTGTGAATGGCTGTTGCTACAATGGACCCAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGTGTATGATCTCAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp AACAAACACGGGACCTATTGCAATGGAAGGTGGCTGGTTGTCTACTaGGTATACCGTGATGTTGAGATCATACACTGGAAAGGACGCATG +
Preference number: 5 (lower is better)
Translates to: NKHGTYCNGRWLVVY*VYRDVEIIHWKGRM
Trigger: CATGCGTCCTTTCCAGTGTATGATCTCAACATCACGGTATACCCAGTAGACAACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp CATGGAAAAGCTGTGAACAGGTGCATGTTTCTGGTGAGGGTTGGCTaGCTGCTTATTCTCAGAGAAGTCTTTGCTAAACCCCCTATCGAT +
Preference number: 5 (lower is better)
Translates to: HGKAVNRCMFLVRVG*LLILREVFAKPPID
Trigger: ATCGATAGGGGGTTTAGCAAAGACTTCTCTGAGAATAAGCAGCCAGCCAACCCTCACCAGAAACATGCACCTGTTCACAGCTTTTCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp CCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAAGCACTTTGATTGTCTTTaGTGGCTGACTAATGATGGA +
Preference number: 5 (lower is better)
Translates to: PIHSQWPACTWSFKPIQKHFDCL*WLTNDG
Trigger: TCCATCATTAGTCAGCCACAAAAGACAATCAAAGTG...CTTTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp CCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTCAAAATGGAAGGAAGTGTGAGTCAGTaGTGGATTCCACCTTATCTG +
Preference number: 5 (lower is better)
Translates to: PGDPIALIQLLDAFFKMEGSVSQ*WIPPYL
Trigger: CAGATAAGGTGGAATCCACAACTGACTCACACTTCC...TTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACCCTCACCCCGCGGTaGATGCTGATGAAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTLTPR*MLMKVG
Trigger: CCCCACCTTCATCAGCATCAACCGCGGGGTGAGGGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp CACCGATCCACTCCCAGTGGCCAGCATGCACTTGGTCGTTCAAACCTATCCAAAATCACAACTTCCACTTaGCAGGCATCTTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: HRSTPSGQHALGRSNLSKITTST*QASFSL
Trigger: TAAAGAGAAAGATGCCTGCAAAGTGGAAGTTGTGAT...TTTGGATAGGTTTGAACGACCAAGTGCATGCTGGCCACTGGGAGTGGATCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp GAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTGCTTGGGACAAGCCATaGAATTCAGGCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ELHSQGSSELLQRPHHLPAWDKP*NSGTSS
Trigger: GCTGGAGGTGCCTGAATTCAATGGCTTGTCCCAAGC...AGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp AAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTGGAGAATTTTTATCAATCGCTaGGGACAAGCCATTGAATTC +
Preference number: 5 (lower is better)
Translates to: KRTFSHQCPRATACAAWRIFINR*GQAIEF
Trigger: GAATTCAATGGCTTGTCCCAAGCGATTGATAAAAAT...TCTCCAGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TGCTGCCTGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTGGGGCTTTAGTAATGTaGAACACCAGCAAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: CCLENTVTRLPRYCSLQAGALVM*NTSKGL
Trigger: TAAACCCTTGCTGGTGTTCAACATTACTAAAGCCCC...AGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCAGGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp GAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCTCCAGGAGCCTCTTTaGGAAGCTGGTCATCCACTG +
Preference number: 5 (lower is better)
Translates to: ELHSQGSSELLQRPHHLPLQEPL*EAGHPL
Trigger: CAGTGGATGACCAGCTTCCAAAAGAGGCTCCTGGAG...AGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGGGGTATACCGTGATGTaGAGATCATACACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: WRIQLQGCPGIVPCKLGQGYTVM*RSYTGK
Trigger: CTTTCCAGTGTATGATCTCAACATCACGGTATACCC...CTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp TGGAGAATACAGTTACAAGGTTGCCCAGGTATTGTTCCCTGCAAGCTTGGGCAGTTCTCAGAGAAGTCTTaGCTAAACCCCCTATCGATG +
Preference number: 5 (lower is better)
Translates to: WRIQLQGCPGIVPCKLGQFSEKS*LNPLSM
Trigger: CATCGATAGGGGGTTTAGCAAAGACTTCTCTGAGAA...CTGCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTTGTAACTGTATTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS TCA 90 bp TCTTCACAGTCCAGAACTGATGTAGTCAAGGAGGTCAGGATGAACTaGTCCACTTCCAGAATAAACACGGCCATGAATGCAGCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: SSQSRTDVVKEVRMN*STSRINTAMNAAFG
Trigger: TCCAAAGGCTGCATTCATGGCCGTGTTTATTCTGGAAGTGGATCAGTTCATCCTGACCTCCTTGACTACATCAGTTCTGGACTGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp GAACTGATCCACTTCCAGAATAAACACGGCCATGAATGCAGCCTTTaGAATCTGATTCGGAATTCCAGCTCTGATATAGACAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ELIHFQNKHGHECSL*NLIRNSSSDIDRQP
Trigger: TGGCTGCCTGTCTATATCAGAGCTGGAATTCCGAATCAGATTCCAAAGGCTGCATTCATGGCCGTGTTTATTCTGGAAGTGGATCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp TGGCTGGTTGTCTACTGGGTATACCGTGATGTTGAGATCATACACTaGAAAGGACGCATGAAGTGGAACAGATGGATTGGGTCCATTGTA +
Preference number: 5 (lower is better)
Translates to: WLVVYWVYRDVEIIH*KGRMKWNRWIGSIV
Trigger: TACAATGGACCCAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGTGTATGATCTCAACATCACGGTATACCCAGTAGACAACCAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp GAGTTGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATTTGTTCCCTGCAAGCTaGGGCAGCCGCATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: ELGNCHPPVSRKLSHDNYLFPAS*GSRIPG
Trigger: ACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAA...ATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp TATCCAAAAGGACTTTCTCCCACCAATGTCCCAGAGCCACCGCATGTGCTGCCTTCAATATTGTCCAGCTaGGTATCTGCATCAGAAATT +
Preference number: 5 (lower is better)
Translates to: YPKGLSPTNVPEPPHVLPSILSS*VSASEI
Trigger: AATTTCTGATGCAGATACCAAGCTGGACAATATTGA...AGGCAGCACATGCGGTGGCTCTGGGACATTGGTGGGAGAAAGTCCTTTTGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp ACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCATCCTCCAAACACGGGACCTATaGCAATGGAAGGTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: TNDGYFGLPFVSWETVILQTRDL*QWKVAG
Trigger: ACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTTG...GAGGATGACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp CCAGGCGATCCCATTGCACTGATACAGCTTCTGGATGCCTTCTTCAAAATGGAAAACCTCATTCCAGTCTaGAGGAGTTCCATGGAAAAG +
Preference number: 5 (lower is better)
Translates to: PGDPIALIQLLDAFFKMENLIPV*RSSMEK
Trigger: CTTTTCCATGGAACTCCTCAAGACTGGAATGAGGTT...TTCCATTTTGAAGAAGGCATCCAGAAGCTGTATCAGTGCAATGGGATCGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS GCA 90 bp GGTCAGGATGAACTGATCCACTTCCAGAATAAACACGGCCATGAATaGAGCCTTTGGAATCTGATTCGGAATTCCAGCTCTGATATAGAC +
Preference number: 5 (lower is better)
Translates to: GQDELIHFQNKHGHE*SLWNLIRNSSSDID
Trigger: GTCTATATCAGAGCTGGAATTCCGAATCAGATTCCAAAGGCTGCATTCATGGCCGTGTTTATTCTGGAAGTGGATCAGTTCATCCTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCCAGTCTCAACCCCTaGTTCCTGGTTACCACAGGC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNASLNP*FLVTTG
Trigger: GCCTGTGGTAACCAGGAACAAGGGGTTGAGACTGGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTGTTCCCTGCAAGCTaGGGCAGCCGCATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLFPAS*GSRIPG
Trigger: ACCTGGAATGCGGCTGCCCAAGCTTGCAGGGAACAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp TCTTCAAAATGGAAGAGTCCCTTTAATTCCAGAGTGCAGTTCTTTGGAAATGAGAAGGTTGCCCAGGTATaGTTCCCTGCAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSKWKSPFNSRVQFFGNEKVAQV*FPASLG
Trigger: GCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTT...CTCATTTCCAAAGAACTGCACTCTGGAATTAAAGGGACTCTTCCATTTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp GTCTTTGTGCCAAGAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCAGGGAGAGGTCAATATaGTCCAGCTTGGTATCTGCA +
Preference number: 5 (lower is better)
Translates to: VFVPRTAFTGEFRITSKTRERSI*SSLVSA
Trigger: TGCAGATACCAAGCTGGACAATATTGACCTCTCCCT...GGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTCTTGGCACAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGCAGTTCCTCAGGCTaGTCTGTTCCGTCCACAGCC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSSSSG*SVPSTA
Trigger: GGCTGTGGACGGAACAGACAAGCCTGAGGAACTGCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS TCA 90 bp TCAGTTCCAAAATTTGAGGAGTGGCCGAGTTCCCTGTGGGGTCCATaGTTTGAAATTCCACGGTATCTGAATTTACTTCCAAAGATGGGT +
Preference number: 5 (lower is better)
Translates to: SVPKFEEWPSSLWGP*FEIPRYLNLLPKMG
Trigger: ACCCATCTTTGGAAGTAAATTCAGATACCGTGGAATTTCAAATCATGGACCCCACAGGGAACTCGGCCACTCCTCAAATTTTGGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS TCA 90 bp TCATTTGTGGGGTTGATTATAATAGAAAATGGTATCTCCAAGGAGTaGTGCTTCCCATCTGTGACGTACACCGTGAACTGGTCGGCAGTT +
Preference number: 5 (lower is better)
Translates to: SFVGLIIIENGISKE*CFPSVTYTVNWSAV
Trigger: AACTGCCGACCAGTTCACGGTGTACGTCACAGATGGGAAGCATCACTCCTTGGAGATACCATTTTCTATTATAATCAACCCCACAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 90 bp GGCATTTGTATCTGCTGTTCTGATGGAGATGTGGACTGTCATAGGTaGACTCCTTTCAAAGAAGAAGTCGTATACCTCCAATTCTACCTC +
Preference number: 5 (lower is better)
Translates to: GICICCSDGDVDCHR*TPFKEEVVYLQFYL
Trigger: GAGGTAGAATTGGAGGTATACGACTTCTTCTTTGAAAGGAGTGCACCTATGACAGTCCACATCTCCATCAGAACAGCAGATACAAATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp AATAAAACAGGTTCTTCCCACACTCTCCCATTCACAATAAAGCCTTaGTTTGTCCCATCTGTGGCCATGAAAGTAAAGCAGTCAGTCTGG +
Preference number: 5 (lower is better)
Translates to: NKTGSSHTLPFTIKP*FVPSVAMKVKQSVW
Trigger: CCAGACTGACTGCTTTACTTTCATGGCCACAGATGGGACAAACCAAGGCTTTATTGTGAATGGGAGAGTGTGGGAAGAACCTGTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000486223.1
CDS CCA 90 bp GAAAATACAGAATTGAAGTTCACATACACACTCCACTTTCTTTGCTaGTCTTCTCCAAGGCAGCTGCTGCAGCTTTGCAAACTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: ENTELKFTYTLHFLC*SSPRQLLQLCKLPE
Trigger: CTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAGTGTGTATGTGAACTTCAATTCTGTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp GTATACCGTGATGTTGAGATCATACACTGGAAAGGACGCATGAAGTaGAACAGATGGATTGGGTCCATTGTAGCAACAGCCATTCACAAA +
Preference number: 5 (lower is better)
Translates to: VYRDVEIIHWKGRMK*NRWIGSIVATAIHK
Trigger: TTTGTGAATGGCTGTTGCTACAATGGACCCAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGTGTATGATCTCAACATCACGGTATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAGGTTGCCCAGGTATaGTTCCCTGCAAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKVAQV*FPASLG
Trigger: GCCCAAGCTTGCAGGGAACAATACCTGGGCAACCTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTGTGGCCAGCATGCACTaGGTCGTTCAAACCTATCCA +
Preference number: 5 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSVASMH*VVQTYP
Trigger: TGGATAGGTTTGAACGACCAAGTGCATGCTGGCCAC...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp TTTTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGGGCCCTCTTCTCCCATaGGTGAAGGCAACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: FSGTHIIMRFGSPTVFCLGPLLP*VKATGS
Trigger: TGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCC...CAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGCCCTCTTCTCCCATaGGTGAAGGCAACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGPLLP*VKATGS
Trigger: TGAACCTGTTGCCTTCACCAATGGGAGAAGAGGGCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCTTGGGACAAGCCATaGAATTCAGGCACCTCCAGC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAWDKP*NSGTSS
Trigger: GCTGGAGGTGCCTGAATTCAATGGCTTGTCCCAAGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGGGGACTATCATCTTaGGGCAAGACGTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGGLSS*GKTLMG
Trigger: CCCCATCAACGTCTTGCCCAAAGATGATAGTCCCCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCCAGGAGCCTCTTTaGGAAGCTGGTCATCCACTG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLQEPL*EAGHPL
Trigger: CAGTGGATGACCAGCTTCCAAAAGAGGCTCCTGGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCGCCACCTGTGTGTTaGTATGTCACGGCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSPPVC*YVTASE
Trigger: CTCAGAGGCCGTGACATACAAACACACAGGTGGCGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCCATGGCGTGGCTTTaGAGTGATGCTGAACAGCAG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAMAWL*SDAEQQ
Trigger: CTGCTGTTCAGCATCACTCAAAAGCCACGCCATGGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 90 bp AGTCTGAGCTTCACTGTGTCTTCATCAAGAATTGGACAACCATTGTaGACATACTTGACTTCGTTGGGAAGGAAATGGCAGTCAAAGACC +
Preference number: 5 (lower is better)
Translates to: SLSFTVSSSRIGQPL*TYLTSLGRKWQSKT
Trigger: GGTCTTTGACTGCCATTTCCTTCCCAACGAAGTCAAGTATGTTCACAATGGTTGTCCAATTCTTGATGAAGACACAGTGAAGCTCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 90 bp GATCTAATCAGTCTCTTCAATCCTCAACAGAAGTCAATGGAAAGGTaGAGCTATCCACTTCTTCTACTTTTGGCTGGCTGGGTCAAACTG +
Preference number: 5 (lower is better)
Translates to: DLISLFNPQQKSMER*SYPLLLLLAGWVKL
Trigger: CAGTTTGACCCAGCCAGCCAAAAGTAGAAGAAGTGGATAGCTTCACCTTTCCATTGACTTCTGTTGAGGATTGAAGAGACTGATTAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486223.1
CDS GCA 90 bp ACAGAAAATACAGAATTGAAGTTCACATACACACTCCACTTTCTTTaGTGGTCTTCTCCAAGGCAGCTGCTGCAGCTTTGCAAACTTCCT +
Preference number: 5 (lower is better)
Translates to: TENTELKFTYTLHFL*WSSPRQLLQLCKLP
Trigger: AGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAGAAAGTGGAGTGTGTATGTGAACTTCAATTCTGTATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp AGGCACCTCCAGCACATTGTTACTCATATGGATGATGTTACAGTCTaGTTCCAGGAGATAGACCCACAGGATAAAAGTTTCTATGAAGGT +
Preference number: 5 (lower is better)
Translates to: RHLQHIVTHMDDVTV*FQEIDPQDKSFYEG
Trigger: ACCTTCATAGAAACTTTTATCCTGTGGGTCTATCTCCTGGAACCAGACTGTAACATCATCCATATGAGTAACAATGTGCTGGAGGTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTACCAAATGCAAGCTaGAGTGAGTGCCAGGGACTC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLPNAS*SECQGL
Trigger: GAGTCCCTGGCACTCACTCAAGCTTGCATTTGGTAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTCAGGAGCCCCACTaGAGAAGGGGAATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFQEPH*RRGMQE
Trigger: CTCTTGCATTCCCCTTCTCAAGTGGGGCTCCTGAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGATGGACGAACTGTTTaGCCATTCCCACGGGTCCTA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDGRTV*PFPRVL
Trigger: TAGGACCCGTGGGAATGGCAAAACAGTTCGTCCATC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCCACATCCTTGGTTaGGGGACTCCAGGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFHILG*GTPGFP
Trigger: TGGAAAGCCTGGAGTCCCCAAACCAAGGATGTGGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTGTCTTCCACATCCTaGGTTTGGGGACTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLSSTS*VWGLQA
Trigger: AGCCTGGAGTCCCCAAACCAAGGATGTGGAAGACAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp TTTTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGTTGTCTTCCACATCCTaGGTTTGGGGACTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: FSGTHIIMRFGSPTVFCLLSSTS*VWGLQA
Trigger: AGCCTGGAGTCCCCAAACCAAGGATGTGGAAGACAA...CAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCGGCTGGACAGGATTaGTCTTCCACATCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPAGQD*SSTSLV
Trigger: AACCAAGGATGTGGAAGACAAATCCTGTCCAGCCGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp TGGGAAACTGTCATCCTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGTGGCCAGCATGCACTaGGTCGTTCAAACCTATCCA +
Preference number: 5 (lower is better)
Translates to: WETVILQFQGNYPMIIIDVASMH*VVQTYP
Trigger: TGGATAGGTTTGAACGACCAAGTGCATGCTGGCCAC...ATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAGGATGACAGTTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGGCCAGCATGCACTaGGTCGTTCAAACCTATCCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVASMH*VVQTYP
Trigger: TGGATAGGTTTGAACGACCAAGTGCATGCTGGCCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAGAATGGCTGCTGTTaGGTGGCTGATAGGCGATCT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQNGCC*VADRRS
Trigger: AGATCGCCTATCAGCCACCAAACAGCAGCCATTCTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTGGCACTGAAAGATTaGGAGGTTCATGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVALKD*EVHGCP
Trigger: GGGACAGCCATGAACCTCCAAATCTTTCAGTGCCAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAACGCCTCAGGAACTaGATTGTCCACTGGGAGGAT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNERLRN*IVHWED
Trigger: ATCCTCCCAGTGGACAATCAAGTTCCTGAGGCGTTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTCACTTTCAGAGGGTaGGTGAACGCCTCAGGAACT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVTFRG*VNASGT
Trigger: AGTTCCTGAGGCGTTCACCAACCCTCTGAAAGTGAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATGGAAGGTGGCTGGTaGTCTACTGGGTATACCGTG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNMEGGW*STGYTV
Trigger: CACGGTATACCCAGTAGACAACCAGCCACCTTCCAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAAACACGGGACCTATaGCAATGGAAGGTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQTRDL*QWKVAG
Trigger: ACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTCCTGAAGTTGCCCATTTaGGGGAAGCCTTTCAAATAC +
Preference number: 5 (lower is better)
Translates to: NCIHRGVQNYFKDLIIFLLKLPI*GKPFKY
Trigger: GTATTTGAAAGGCTTCCCCAAAATGGGCAACTTCAG...GAGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGATTCTGGGAATCCATaGCCCCGGTGTGTGTGTATC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDSGNP*PRCVCI
Trigger: GATACACACACACCGGGGCAATGGATTCCCAGAATC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS TCA 90 bp CAAGGGCAACAAACCCACATTCTCACAGACTTCATATTCGGTCTGTaGCCATTCAATATGAGACCACTTCAGTTCCAAAATTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: QGQQTHILTDFIFGL*PFNMRPLQFQNLRS
Trigger: ACTCCTCAAATTTTGGAACTGAAGTGGTCTCATATTGAATGGTCACAGACCGAATATGAAGTCTGTGAGAATGTGGGTTTGTTGCCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTTCAGTTCCAAAATTaGAGGAGTGGCCGAGTTCCC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLQFQN*RSGRVP
Trigger: GGGAACTCGGCCACTCCTCAAATTTTGGAACTGAAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp ACTAATGATGGATACTTTGGCCTTCCTTTTGTGAGTTGGGAAACTGTCATCCTCTTTTCACTGCAGCTTTaGTCTTTGTGCCAAGAACTG +
Preference number: 5 (lower is better)
Translates to: TNDGYFGLPFVSWETVILFSLQL*SLCQEL
Trigger: CAGTTCTTGGCACAAAGACAAAAGCTGCAGTGAAAA...GAGGATGACAGTTTCCCAACTCACAAAAGGAAGGCCAAAGTATCCATCATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp ATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCATTTCCCTTGTCTTTCCACCTTATCTGCTaGAGGCAGTTCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: IIMRFGSPTVFCLPFPLSFHLIC*RQFCHF
Trigger: AAAGTGGCAGAACTGCCTCAAGCAGATAAGGTGGAA...AGACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000427623.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCAGAGTGCAGTTCTTaGGAAATGAGGGCAACTGGT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPECSS*EMRATG
Trigger: ACCAGTTGCCCTCATTTCCAAAGAACTGCACTCTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp TTCTGGAACACACATAATTATGAGGTTTGGCTCTCCTACAGTCTTTTGTTTGCCACATACTTGACTTCGTaGGGAAGGAAATGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: FWNTHNYEVWLSYSLLFATYLTS*GRKWQS
Trigger: TGACTGCCATTTCCTTCCCAACGAAGTCAAGTATGT...GGCAAACAAAAGACTGTAGGAGAGCCAAACCTCATAATTATGTGTGTTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAAGACCACGAAGTCTTaGGTGGAGTCGCTGTCATCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNKTTKS*VESLSS
Trigger: TGATGACAGCGACTCCACCAAAGACTTCGTGGTCTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGGAGTTATATGGATaGTTGCCACCTGTGGCACTG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLELYG*LPPVAL
Trigger: CAGTGCCACAGGTGGCAACAATCCATATAACTCCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCCACCTCAGTTTCCTaGACAACCAAATGCCGAGAA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNATSVS*TTKCRE
Trigger: TTCTCGGCATTTGGTTGTCAAGGAAACTGAGGTGGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACTGGTGGCTCATCGTaGACAGGGAATACCTCAACA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTGGSS*TGNTST
Trigger: TGTTGAGGTATTCCCTGTCAACGATGAGCCACCAGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGTCCTTGATGGTGATTaGACAGTCAAGAGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNVLDGD*TVKSRG
Trigger: TCCCCTGCTCTTGACTGTCAAATCACCATCAAGGAC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCAGGAGCGTGGTGGTaGTTAAGAAACCTCTATCAC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPGAWW*LRNLYH
Trigger: GTGATAGAGGTTTCTTAACAACCACCACGCTCCTGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS TCA 90 bp GGCCGAGTTCCCTGTGGGGTCCATGATTTGAAATTCCACGGTATCTaGATTTACTTCCAAAGATGGGTTTATGATGTAAAGAATAGTCTT +
Preference number: 5 (lower is better)
Translates to: GRVPCGVHDLKFHGI*IYFQRWVYDVKNSL
Trigger: AAGACTATTCTTTACATCATAAACCCATCTTTGGAAGTAAATTCAGATACCGTGGAATTTCAAATCATGGACCCCACAGGGAACTCGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAGCTGACACTTGGTaGACCTTTATACCCACAAAG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAADTW*TFIPTK
Trigger: CTTTGTGGGTATAAAGGTCAACCAAGTGTCAGCTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGTGCTTGCTTTGGTaGGAGGAATATGAAGGATGG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLCLLW*EEYEGW
Trigger: CCATCCTTCATATTCCTCCAACCAAAGCAAGCACAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCCACCTTATCTGCTaGAGGCAGTTCTGCCACTTT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFHLIC*RQFCHF
Trigger: AAAGTGGCAGAACTGCCTCAAGCAGATAAGGTGGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGAAGTGTGAGTCAGTaGTGGATTCCACCTTATCTG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGSVSQ*WIPPYL
Trigger: CAGATAAGGTGGAATCCACAACTGACTCACACTTCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGCACCTCCAGCACATaGTTACTCATATGGATGATG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGTSST*LLIWMM
Trigger: CATCATCCATATGAGTAACAATGTGCTGGAGGTGCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCACGCACTCTCTGACTaGTACACAATTTTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHALSD*YTILLL
Trigger: CAGGAGCAAAATTGTGTACAAGTCAGAGAGTGCGTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGTGCTGATGATGCTTaGACCTCCCTCAGTCACTTT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCADDA*TSLSHF
Trigger: AAAGTGACTGAGGGAGGTCAAAGCATCATCAGCACA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGGGAGAGGTCAATATaGTCCAGCTTGGTATCTGCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNRERSI*SSLVSA
Trigger: TGCAGATACCAAGCTGGACAATATTGACCTCTCCCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp GAACTGCATTCACAGGGGAGTTCAGAATTACTTCAAAGACCTCATCATCTTCCTTTTCACCCATATTCATaGCAATTTCAGCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: ELHSQGSSELLQRPHHLPFHPYS*QFQPSC
Trigger: GCAAGAAGGCTGAAATTGCAATGAATATGGGTGAAA...AGGAAGATGATGAGGTCTTTGAAGTAATTCTGAACTCCCCTGTGAATGCAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCCCCACTACATCCATTaGGCTGAAGTTTGTAATGGG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNPHYIH*AEVCNG
Trigger: CCCATTACAAACTTCAGCCAAATGGATGTAGTGGGG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTCACAATAAAGCCTaGGTTTGTCCCATCTGTGGC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIHNKA*VCPICG
Trigger: GCCACAGATGGGACAAACCAAGGCTTTATTGTGAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGCAGCTTTTGTCTTaGTGCCAAGAACTGCATTCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLQLLS*CQELHS
Trigger: TGAATGCAGTTCTTGGCACAAAGACAAAAGCTGCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAATACAGTTACAAGGTaGCCCAGGTATTGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNTVTR*PRYCSL
Trigger: CAGGGAACAATACCTGGGCAACCTTGTAACTGTATT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTCTCCTACAGTCTTTaGTTTGCCATTTCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLSYSL*FAISLV
Trigger: GACAAGGGAAATGGCAAACAAAAGACTGTAGGAGAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGACAAAACTGAGCTTTaGTTAATGAGGTCGGTTGCC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDKTEL*LMRSVA
Trigger: GGCAACCGACCTCATTAACAAAAGCTCAGTTTTGTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACACATACTTGACTTCGTaGGGAAGGAAATGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNTYLTS*GRKWQS
Trigger: TGACTGCCATTTCCTTCCCAACGAAGTCAAGTATGT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGACTTGTACACAATTTaGCTCCTGGTATCTGTGAGG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNDLYTI*LLVSVR
Trigger: CCTCACAGATACCAGGAGCAAAATTGTGTACAAGTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGGGCTTTAGTAATGTaGAACACCAGCAAGGGTTTA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGALVM*NTSKGL
Trigger: TAAACCCTTGCTGGTGTTCAACATTACTAAAGCCCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGTTCAATCACAACATaGGTTATGAGGAACGGGGGA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSSITT*VMRNGG
Trigger: TCCCCCGTTCCTCATAACCAATGTTGTGATTGAACT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAGTTATATGGATTGTaGCCACCTGTGGCACTGAAA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNELYGL*PPVALK
Trigger: TTTCAGTGCCACAGGTGGCAACAATCCATATAACTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGGTATACCGTGATGTaGAGATCATACACTGGAAAG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGYTVM*RSYTGK
Trigger: CTTTCCAGTGTATGATCTCAACATCACGGTATACCC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTCTCAGAGAAGTCTTaGCTAAACCCCCTATCGATG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFSEKS*LNPLSM
Trigger: CATCGATAGGGGGTTTAGCAAAGACTTCTCTGAGAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAACCTCATTCCAGTCTaGAGGAGTTCCATGGAAAAG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNNLIPV*RSSMEK
Trigger: CTTTTCCATGGAACTCCTCAAGACTGGAATGAGGTT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTGAAGTTGCCCATTTaGGGGAAGCCTTTCAAATAC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLKLPI*GKPFKY
Trigger: GTATTTGAAAGGCTTCCCCAAAATGGGCAACTTCAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTATCTTAAGCTGAAGTaGCCCATTTTGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNYLKLK*PILGKP
Trigger: AGGCTTCCCCAAAATGGGCAACTTCAGCTTAAGATA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGAAGGTGAAGCTATCTaGATTCTGGGAATCCATTGC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNEGEAI*ILGIHC
Trigger: GCAATGGATTCCCAGAATCAAGATAGCTTCACCTTC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS CCA 90 bp AGTAAATCTGTAAAGTCTGAGCTTCACTGTGTCTTCATCAAGAATTaGACAACCATTGTGAACATACTTGACTTCGTTGGGAAGGAAATG +
Preference number: 5 (lower is better)
Translates to: SKSVKSELHCVFIKN*TTIVNILDFVGKEM
Trigger: CATTTCCTTCCCAACGAAGTCAAGTATGTTCACAATGGTTGTCCAATTCTTGATGAAGACACAGTGAAGCTCAGACTTTACAGATTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCTTCAGCATGGATTCTaGTGTCACCATCTACCAAAT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNLQHGF*CHHLPN
Trigger: ATTTGGTAGATGGTGACACAAGAATCCATGCTGAAG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACAGCTGTTTTGTCCAATaGGTCTACCTGAATGGTGAA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSCFVQ*VYLNGE
Trigger: TTCACCATTCAGGTAGACCAATTGGACAAAACAGCT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTTCACTGCAGCTTTaGTCTTTGTGCCAAGAACTG +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFSLQL*SLCQEL
Trigger: CAGTTCTTGGCACAAAGACAAAAGCTGCAGTGAAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGGTCCTAAGCTTCCTTaGAGAAAGATCTGTAGAATC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNGPKLP*RKICRI
Trigger: GATTCTACAGATCTTTCTCAAAGGAAGCTTAGGACC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCCTCACAGCTCACTTaGAGGCTTCCTATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSSQLT*RLPIFF
Trigger: AAAGAAAATAGGAAGCCTCAAAGTGAGCTGTGAGGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCAAAGTACCGCCATGTaGGTTACTGACAGAAAATGT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNQSTAM*VTDRKC
Trigger: ACATTTTCTGTCAGTAACCAACATGGCGGTACTTTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACGCAATTTCAGCCTTCTaGCTCAGCATTGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNAISAF*LSIGFS
Trigger: TGAAAAACCAATGCTGAGCAAGAAGGCTGAAATTGC...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACCACTTTGATTGTCTTTaGTGGCTGACTAATGATGGA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNHFDCL*WLTNDG
Trigger: TCCATCATTAGTCAGCCACAAAAGACAATCAAAGTG...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380875.7
ENST00000380880.4
ENST00000380894.5
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATCACAACTTCCACTTaGCAGGCATCTTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNITTST*QASFSL
Trigger: TAAAGAGAAAGATGCCTGCAAAGTGGAAGTTGTGAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp CTCCAGTTTCAAGGAAACTATCCCATGATAATTATAGATGATGTCTGTTCCATTGCAATTTCAGCCTTCTaGCTCAGCATTGGTTTTTCA +
Preference number: 5 (lower is better)
Translates to: LQFQGNYPMIIIDDVCSIAISAF*LSIGFS
Trigger: TGAAAAACCAATGCTGAGCAAGAAGGCTGAAATTGC...AATGGAACAGACATCATCTATAATTATCATGGGATAGTTTCCTTGAAACTGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTTTCACCCATATTCATaGCAATTTCAGCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNFHPYS*QFQPSC
Trigger: GCAAGAAGGCTGAAATTGCAATGAATATGGGTGAAA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 90 bp TCTACTGAAATGGTTTTAAGTATCTTATGTTTCCCATCTGACAATTaGATTGTAAAATCATCAGCAAGGCTCTCTGAGTCATCATGCATG +
Preference number: 5 (lower is better)
Translates to: STEMVLSILCFPSDN*IVKSSARLSESSCM
Trigger: CATGCATGATGACTCAGAGAGCCTTGCTGATGATTTTACAATCCAATTGTCAGATGGGAAACATAAGATACTTAAAACCATTTCAGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTGTCTTCATCAAGAATaGGACAACCATTGTGAACAT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNCLHQE*DNHCEH
Trigger: ATGTTCACAATGGTTGTCCAATTCTTGATGAAGACA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACATTTTTATCAATCGCTaGGGACAAGCCATTGAATTC +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNIFINR*GQAIEF
Trigger: GAATTCAATGGCTTGTCCCAAGCGATTGATAAAAAT...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS-3UTR CAA 90 bp AATGTCCCATTTTCACTAGACAGAATCACAAAGGTATACCCACTCAATCATAACTCAATATTGTCCAGCTaGGTATCTGCATCAGAAATT +
Preference number: 5 (lower is better)
Translates to: NVPFSLDRITKVYPLNHNSILSS*VSASEI
Trigger: AATTTCTGATGCAGATACCAAGCTGGACAATATTGA...GTTATGATTGAGTGGGTATACCTTTGTGATTCTGTCTAGTGAAAATGGGACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 72 bp CCCGACCTCCCTGGCGGACAGCCACCGCTAGCCCCGTaGCTTCTGCTGGTTGGGTCCGCAGGGACAAAACTG +
Preference number: 6 (lower is better)
Translates to: PDLPGGQPPLAP*LLLVGSAGTKL
Trigger: CAGTTTTGTCCCTGCGGACCCAACCAGCAGAAGGCACGGGGCTAGCGGTGGCTGTCCGCCAGGGAGGTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS CAA 90 bp CCTGACAGGAAGGCAGAGTGGCCCTTCATCACCCTCACCCCGCGGTaGATGCTGATGAAGGTGGGGCTGGCCCAGGCCAGGAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PDRKAEWPFITLTPR*MLMKVGLAQARRSS
Trigger: GCTGCTCCTCCTGGCCTGGGCCAGCCCCACCTTCATCAGCATCAACCGCGGGGTGAGGGTGATGAAGGGCCACTCTGCCTTCCTGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp TGGTCGAGGCTCCCCGAGAACCATCTGGCCATGGGCTaGCAGCCGAGTTCTCGCAGTGTCCAGGCTGACGGT +
Preference number: 6 (lower is better)
Translates to: WSRLPENHLAMG*QPSSRSVQADG
Trigger: ACCGTCAGCCTGGACACTGCGAGAACTCGGCTGCCAGCCCATGGCCAGATGGTTCTCGGGGAGCCTCGACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp AAGGCAGAGTGGCCCTTCATCACCCTCACCCCGCGGTaGATGCTGATGAAGGTGGGGCTGGCCCAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: KAEWPFITLTPR*MLMKVGLAQAR
Trigger: CCTGGCCTGGGCCAGCCCCACCTTCATCAGCATCAACCGCGGGGTGAGGGTGATGAAGGGCCACTCTGCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp TCTTCTGGTCGAGGCTCCCCGAGAACCATCTGGCCATaGGCTGGCAGCCGAGTTCTCGCAGTGTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SSGRGSPRTIWP*AGSRVLAVSRL
Trigger: CAGCCTGGACACTGCGAGAACTCGGCTGCCAGCCCATGGCCAGATGGTTCTCGGGGAGCCTCGACCAGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp CGAGGTTCTTCTGGTCGAGGCTCCCCGAGAACCATCTaGCCATGGGCTGGCAGCCGAGTTCTCGCAGTGTCC +
Preference number: 6 (lower is better)
Translates to: RGSSGRGSPRTI*PWAGSRVLAVS
Trigger: GGACACTGCGAGAACTCGGCTGCCAGCCCATGGCCAGATGGTTCTCGGGGAGCCTCGACCAGAAGAACCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GATGCCTTCTACTGTTTACACAGAGCCCGACCTCCCTaGCGGACAGCCACCGCTAGCCCCGTGCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: DAFYCLHRARPP*RTATASPVPSA
Trigger: AGCAGAAGGCACGGGGCTAGCGGTGGCTGTCCGCCAGGGAGGTCGGGCTCTGTGTAAACAGTAGAAGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS CCA 72 bp GCAAACTTCAGGTCATCTCCTGACAGGAAGGCAGAGTaGCCCTTCATCACCCTCACCCCGCGGTTGATGCTG +
Preference number: 6 (lower is better)
Translates to: ANFRSSPDRKAE*PFITLTPRLML
Trigger: CAGCATCAACCGCGGGGTGAGGGTGATGAAGGGCCACTCTGCCTTCCTGTCAGGAGATGACCTGAAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp CTGGCGTCCACATCTGAAGCTCGCAGCATGGATCCCTaGATCAGGATGGTCTGCCCCTCCTCCAGTTCAATC +
Preference number: 6 (lower is better)
Translates to: LASTSEARSMDP*IRMVCPSSSSI
Trigger: GATTGAACTGGAGGAGGGGCAGACCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAGATGTGGACGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp AGTCATCACTGGCGTCCACATCTGAAGCTCGCAGCATaGATCCCTGGATCAGGATGGTCTGCCCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SHHWRPHLKLAA*IPGSGWSAPPP
Trigger: TGGAGGAGGGGCAGACCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAGATGTGGACGCCAGTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 72 bp CTTTGCTGGTCTTCTCCAAGGCAGCTGCTGCAGCTTTaGAAACTTCCTGAGCGCCAAGCCTCAGGACTCCCT +
Preference number: 6 (lower is better)
Translates to: LCWSSPRQLLQL*KLPERQASGLP
Trigger: AGGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS GCA 72 bp CTTTGCTGGTCTTCTCCAAGGCAGCTGCTGCAGCTTTaGAAACTTCCTGAGCGCCAAGCCTCAGGACTCCAC +
Preference number: 6 (lower is better)
Translates to: LCWSSPRQLLQL*KLPERQASGLH
Trigger: GTGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS CCA 72 bp GAAGCCATGGACAGGATAGCCTATCAGTCCTGGCCCTaGCTTCTTCATGATCTCCCCAGCCTGTGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: EAMDRIAYQSWP*LLHDLPSLWRL
Trigger: AAGCCTCCACAGGCTGGGGAGATCATGAAGAAGCCAGGGCCAGGACTGATAGGCTATCCTGTCCATGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 90 bp CCCGTGCCTTCTGCTGGTTGGGTCCGCAGGGACAAAACTGAGCTTTaGTTAATGAGGTCGGTTGCCTCTTCCCAGTCTCTTCCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: PVPSAGWVRRDKTEL*LMRSVASSQSLPSF
Trigger: GAAGCTGGGAAGAGACTGGGAAGAGGCAACCGACCTCATTAACAAAAGCTCAGTTTTGTCCCTGCGGACCCAACCAGCAGAAGGCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS CAA 90 bp GTCTTTGCTAAACCCCCTATCGATGAGGAGGCCATGGCGTGGCTTTaGAGTGATGCTGAACAGCAGGGCATCCTGGGGAATGTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: VFAKPPIDEEAMAWL*SDAEQQGILGNVQV
Trigger: GACCTGGACATTCCCCAGGATGCCCTGCTGTTCAGCATCACTCAAAAGCCACGCCATGGCCTCCTCATCGATAGGGGGTTTAGCAAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp AGCCGGACAGCACCAATGTCGTCATTGTCGACAACCTaGAACTGTTCCCAAGTGATGGCTCGAGACTGCCCC +
Preference number: 6 (lower is better)
Translates to: SRTAPMSSLSTT*NCSQVMARDCP
Trigger: GGGGCAGTCTCGAGCCATCACTTGGGAACAGTTTCAGGTTGTCGACAATGACGACATTGGTGCTGTCCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp TTCTCCAAGGCAGCTGCTGCAGCTTTGCAAACTTCCTaGGCGCCAAGCCTCAGGACTCCACAGACTCTTCCA +
Preference number: 6 (lower is better)
Translates to: FSKAAAAALQTS*APSLRTPQTLP
Trigger: TGGAAGAGTCTGTGGAGTCCTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380875.7
CDS CAA 72 bp AAACCCCCTATCGATGAGGAGGCCATGGCGTGGCTTTaGAGTGATGCTGAACAGCAGGGCATCCTGGGGAAT +
Preference number: 6 (lower is better)
Translates to: KPPIDEEAMAWL*SDAEQQGILGN
Trigger: ATTCCCCAGGATGCCCTGCTGTTCAGCATCACTCAAAAGCCACGCCATGGCCTCCTCATCGATAGGGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp CGTGCCTTCTGCTGGTTGGGTCCGCAGGGACAAAACTaGGCTTTTGTTAATGAGGTCGGTTGCCTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: RAFCWLGPQGQN*AFVNEVGCLFP
Trigger: TGGGAAGAGGCAACCGACCTCATTAACAAAAGCTCAGTTTTGTCCCTGCGGACCCAACCAGCAGAAGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS TCA 72 bp TTAAAGTCAGCCATCCATGCTGCAGGCCACCAACGGTaGCTAGCCGGACAGCACCAATGTCGTCATTGTCGA +
Preference number: 6 (lower is better)
Translates to: LKSAIHAAGHQR*LAGQHQCRHCR
Trigger: TCGACAATGACGACATTGGTGCTGTCCGGCTAGTCACCGTTGGTGGCCTGCAGCATGGATGGCTGACTTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 72 bp CTGTCCACAGTCTCCAGTGTGATCTCAAACACCCCGTaGTCGGTCCGCAGTCCATTGCTGATGATGAATCTG +
Preference number: 6 (lower is better)
Translates to: LSTVSSVISNTP*SVRSPLLMMNL
Trigger: CAGATTCATCATCAGCAATGGACTGCGGACCGAGCACGGGGTGTTTGAGATCACACTGGAGACTGTGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000466679.1
ENST00000485068.5
CDS GCA 72 bp TCCACTTTCTTTGCTGGTCTTCTCCAAGGCAGCTGCTaGAGCTTTGCAAACTTCCTGAGCGCCAAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: STFFAGLLQGSC*SFANFLSAKPQ
Trigger: CTGAGGCTTGGCGCTCAGGAAGTTTGCAAAGCTGCAGCAGCTGCCTTGGAGAAGACCAGCAAAGAAAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp TTTGCTAAACCCCCTATCGATGAGGAGGCCATGGCGTaGCTTTTGAGTGATGCTGAACAGCAGGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: FAKPPIDEEAMA*LLSDAEQQGIL
Trigger: CAGGATGCCCTGCTGTTCAGCATCACTCAAAAGCCACGCCATGGCCTCCTCATCGATAGGGGGTTTAGCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp GATAGGCCACATTCTTGCTGTCCACATCCTGCTGGGTaGAATTGTGTTGAAGTAGCCCTGTCCCCCACAGGT +
Preference number: 6 (lower is better)
Translates to: DRPHSCCPHPAG*NCVEVALSPTG
Trigger: ACCTGTGGGGGACAGGGCTACTTCAACACAATTTCACCCAGCAGGATGTGGACAGCAAGAATGTGGCCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000485068.5
CDS TCA 72 bp CATGAAAGTAAAGCAGTCAGTCTGGGAGTCCCCTCCTaGGTGCCGATAGGCCACATTCTTGCTGTCCACATC +
Preference number: 6 (lower is better)
Translates to: HESKAVSLGVPS*VPIGHILAVHI
Trigger: GATGTGGACAGCAAGAATGTGGCCTATCGGCACTCAGGAGGGGACTCCCAGACTGACTGCTTTACTTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000485068.5
CDS TCA 72 bp CAGTGTCAGGGTCTGATGCCTTCAACACGCGGGAAGTaGTGTAAATCCCGTAGCAGCCATTTTTCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: QCQGLMPSTRGK*CKSRSSHFSGA
Trigger: GGCTCCTGAAAAATGGCTGCTACGGGATTTACATCACTTCCCGCGTGTTGAAGGCATCAGACCCTGACACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS TCA 72 bp TGTCGTCATTGTCGACAACCTGAAACTGTTCCCAAGTaGTGGCTCGAGACTGCCCCTCAAGGAGACTCAGAC +
Preference number: 6 (lower is better)
Translates to: CRHCRQPETVPK*WLETAPQGDSD
Trigger: GTCTGAGTCTCCTTGAGGGGCAGTCTCGAGCCATCACTTGGGAACAGTTTCAGGTTGTCGACAATGACGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp TCCACTGTGACTCCAGCTCTCCTCACCACCCCATGCTaGGGTTCGCGAGCAATCACAAACATCAACTTCAAG +
Preference number: 6 (lower is better)
Translates to: STVTPALLTTPC*GSRAITNINFK
Trigger: CTTGAAGTTGATGTTTGTGATTGCTCGCGAACCTCAGCATGGGGTGGTGAGGAGAGCTGGAGTCACAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp CAGGGGACCTGTTGTTGCCATCCCAAAGGTAGAAGGTaGAGCTATCTTGATTCTGGGAATCCATTGCCCCGG +
Preference number: 6 (lower is better)
Translates to: QGTCCCHPKGRR*SYLDSGNPLPR
Trigger: CCGGGGCAATGGATTCCCAGAATCAAGATAGCTTCACCTTCTACCTTTGGGATGGCAACAACAGGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000466679.1
ENST00000497634.2
CDS CCA 72 bp TCATCTGCTGCAGTGTCAGGGTCAGTGGCGGACAAATaGTTAACAGTAAGGGCTGTTGAGCAGCCCTCATCT +
Preference number: 6 (lower is better)
Translates to: SSAAVSGSVADK*LTVRAVEQPSS
Trigger: AGATGAGGGCTGCTCAACAGCCCTTACTGTTAACCATTTGTCCGCCACTGACCCTGACACTGCAGCAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp CCCATCTGTGACGTACACCGTGAACTGGTCGGCAGTTaGTTCTATCCTCAGATGCCTGGACTGCACATAGTT +
Preference number: 6 (lower is better)
Translates to: PICDVHRELVGS*FYPQMPGLHIV
Trigger: AACTATGTGCAGTCCAGGCATCTGAGGATAGAACCAACTGCCGACCAGTTCACGGTGTACGTCACAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 90 bp CCCTGGATCAGGATGGTCTGCCCCTCCTCCAGTTCAATCACAACATaGGTTATGAGGAACGGGGGACTATCATCTTTGGGCAAGACGTTG +
Preference number: 6 (lower is better)
Translates to: PWIRMVCPSSSSITT*VMRNGGLSSLGKTL
Trigger: CAACGTCTTGCCCAAAGATGATAGTCCCCCGTTCCTCATAACCAATGTTGTGATTGAACTGGAGGAGGGGCAGACCATCCTGATCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp TGTGTGTATCTCAGCAAGTTCAGATCCACTTCCTCCTaGGTGCATTTCATGCCAGGGGAGAGAGGAACCCAG +
Preference number: 6 (lower is better)
Translates to: CVYLSKFRSTSS*VHFMPGERGTQ
Trigger: CTGGGTTCCTCTCTCCCCTGGCATGAAATGCACTCAGGAGGAAGTGGATCTGAACTTGCTGAGATACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000497634.2
CDS CAA 72 bp TCTGCTGGTTGGGTCCGCAGGGACAAAACTGAGCTTTaGTTAATGAGGTCGGTTGCCTCTTCCCAGTCTCTT +
Preference number: 6 (lower is better)
Translates to: SAGWVRRDKTEL*LMRSVASSQSL
Trigger: AAGAGACTGGGAAGAGGCAACCGACCTCATTAACAAAAGCTCAGTTTTGTCCCTGCGGACCCAACCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380880.4
CDS CAA 72 bp AGGATGGTCTGCCCCTCCTCCAGTTCAATCACAACATaGGTTATGAGGAACGGGGGACTATCATCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: RMVCPSSSSITT*VMRNGGLSSLG
Trigger: GCCCAAAGATGATAGTCCCCCGTTCCTCATAACCAATGTTGTGATTGAACTGGAGGAGGGGCAGACCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 90 bp AGGGGACCTGTTGTTGCCATCCCAAAGGTAGAAGGTGAAGCTATCTaGATTCTGGGAATCCATTGCCCCGGTGTGTGTGTATCTCAGCAA +
Preference number: 6 (lower is better)
Translates to: RGPVVAIPKVEGEAI*ILGIHCPGVCVSQQ
Trigger: TTGCTGAGATACACACACACCGGGGCAATGGATTCCCAGAATCAAGATAGCTTCACCTTCTACCTTTGGGATGGCAACAACAGGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000466679.1
ENST00000497634.2
CDS TCA 72 bp ATTGAAGAAGATGTAGTCATCACTGGCGTCCACATCTaGAGCTCGCAGCATGGATCCCTGGATCAGGATGGT +
Preference number: 6 (lower is better)
Translates to: IEEDVVITGVHI*SSQHGSLDQDG
Trigger: ACCATCCTGATCCAGGGATCCATGCTGCGAGCTTCAGATGTGGACGCCAGTGATGACTACATCTTCTTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp GTCAGTGGCGGACAAATGGTTAACAGTAAGGGCTGTTaGGCAGCCCTCATCTACAACAAACACGGGACCTAT +
Preference number: 6 (lower is better)
Translates to: VSGGQMVNSKGC*AALIYNKHGTY
Trigger: ATAGGTCCCGTGTTTGTTGTAGATGAGGGCTGCTCAACAGCCCTTACTGTTAACCATTTGTCCGCCACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 72 bp CCAATTCTACCTCATCATGTCTCCTCTCAGAATGGCTaGTGTTTGGTGGCTGATAGGCGATCTGCATGTCAC +
Preference number: 6 (lower is better)
Translates to: PILPHHVSSQNG*CLVADRRSACH
Trigger: GTGACATGCAGATCGCCTATCAGCCACCAAACAGCAGCCATTCTGAGAGGAGACATGATGAGGTAGAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp ACTGGACATCTCTGCAATGGGGACCAATGTCTTGCATaGGGGGCATGTAGGCCACTTTCATATAGTTCACAG +
Preference number: 6 (lower is better)
Translates to: TGHLCNGDQCLA*GACRPLSYSSQ
Trigger: CTGTGAACTATATGAAAGTGGCCTACATGCCCCCCATGCAAGACATTGGTCCCCATTGCAGAGATGTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 90 bp CCGTGCAGAGGCAATTCCCGCAGGGAGAGGTCAATATTGTCCAGCTaGGTATCTGCATCAGAAATTAGAATGTGCTCTGTGCTGATGATG +
Preference number: 6 (lower is better)
Translates to: PCRGNSRRERSILSS*VSASEIRMCSVLMM
Trigger: CATCATCAGCACAGAGCACATTCTAATTTCTGATGCAGATACCAAGCTGGACAATATTGACCTCTCCCTGCGGGAATTGCCTCTGCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp CTTTCAGGCAATCCCAGGGCTTTTAATAAAACTCGCTaGTCACTCCTGACAACGCCGGCAAGATTAATGGGC +
Preference number: 6 (lower is better)
Translates to: LSGNPRAFNKTR*SLLTTPARLMG
Trigger: GCCCATTAATCTTGCCGGCGTTGTCAGGAGTGATCAGCGAGTTTTATTAAAAGCCCTGGGATTGCCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp GAGGTCCAGTTGGATGGAGATATAATCAATGTTGGGTaGAGGGGGATCCAGATGCTGATAACGAAGGCCCAT +
Preference number: 6 (lower is better)
Translates to: EVQLDGDIINVG*RGIQMLITKAH
Trigger: ATGGGCCTTCGTTATCAGCATCTGGATCCCCCTTCACCCAACATTGATTATATCTCCATCCAACTGGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp GGGTTTAGGGGTCTCATCTTCTTCACAGTCCAGAACTaGTGTAGTCAAGGAGGTCAGGATGAACTGATCCAC +
Preference number: 6 (lower is better)
Translates to: GFRGLIFFTVQN*CSQGGQDELIH
Trigger: GTGGATCAGTTCATCCTGACCTCCTTGACTACATCAGTTCTGGACTGTGAAGAAGATGAGACCCCTAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GGCCATCAAATATCCGGAAGACCACGAAGTCTTTGGTaGAGTCGCTGTCATCATGATGATAGCGAACAACTC +
Preference number: 6 (lower is better)
Translates to: GHQISGRPRSLW*SRCHHDDSEQL
Trigger: GAGTTGTTCGCTATCATCATGATGACAGCGACTCCACCAAAGACTTCGTGGTCTTCCGGATATTTGATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp AAATGCCGAGAAACTCCAGGAGCCTCTTTTGGAAGCTaGTCATCCACTGGAGTTATATGGATTGTTGCCACC +
Preference number: 6 (lower is better)
Translates to: KCRETPGASFGS*SSTGVIWIVAT
Trigger: GGTGGCAACAATCCATATAACTCCAGTGGATGACCAGCTTCCAAAAGAGGCTCCTGGAGTTTCTCGGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp ACACTGGAAAGGACGCATGAAGTGGAACAGATGGATTaGGTCCATTGTAGCAACAGCCATTCACAAAAGGGC +
Preference number: 6 (lower is better)
Translates to: TLERTHEVEQMD*VHCSNSHSQKG
Trigger: GCCCTTTTGTGAATGGCTGTTGCTACAATGGACCCAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp GTTGTTGCCATCCCAAAGGTAGAAGGTGAAGCTATCTaGATTCTGGGAATCCATTGCCCCGGTGTGTGTGTA +
Preference number: 6 (lower is better)
Translates to: VVAIPKVEGEAI*ILGIHCPGVCV
Trigger: TACACACACACCGGGGCAATGGATTCCCAGAATCAAGATAGCTTCACCTTCTACCTTTGGGATGGCAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000466679.1
ENST00000497634.2
CDS GCA 72 bp CCTGACAACGCCGGCAAGATTAATGGGCTTCCCAAGTaGTTTTCTAATCAGGTAGTGGTTTTCCTTTCCAAG +
Preference number: 6 (lower is better)
Translates to: PDNAGKINGLPK*FSNQVVVFLSK
Trigger: CTTGGAAAGGAAAACCACTACCTGATTAGAAAAGCACTTGGGAAGCCCATTAATCTTGCCGGCGTTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GGTTCTTCCCACACTCTCCCATTCACAATAAAGCCTTaGTTTGTCCCATCTGTGGCCATGAAAGTAAAGCAG +
Preference number: 6 (lower is better)
Translates to: GSSHTLPFTIKP*FVPSVAMKVKQ
Trigger: CTGCTTTACTTTCATGGCCACAGATGGGACAAACCAAGGCTTTATTGTGAATGGGAGAGTGTGGGAAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000486223.1
CDS CCA 72 bp GATGGCCATCAAATATCCGGAAGACCACGAAGTCTTTaGTGGAGTCGCTGTCATCATGATGATAGCGAACAA +
Preference number: 6 (lower is better)
Translates to: DGHQISGRPRSL*WSRCHHDDSEQ
Trigger: TTGTTCGCTATCATCATGATGACAGCGACTCCACCAAAGACTTCGTGGTCTTCCGGATATTTGATGGCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GCCTCTTTTGGAAGCTGGTCATCCACTGGAGTTATATaGATTGTTGCCACCTGTGGCACTGAAAGATTTGGA +
Preference number: 6 (lower is better)
Translates to: ASFGSWSSTGVI*IVATCGTERFG
Trigger: TCCAAATCTTTCAGTGCCACAGGTGGCAACAATCCATATAACTCCAGTGGATGACCAGCTTCCAAAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp AGGGTTGGTGAACGCCTCAGGAACTTGATTGTCCACTaGGAGGATTGTAATGTTAAAGCAGATCCCATGCAA +
Preference number: 6 (lower is better)
Translates to: RVGERLRNLIVH*EDCNVKADPMQ
Trigger: TTGCATGGGATCTGCTTTAACATTACAATCCTCCCAGTGGACAATCAAGTTCCTGAGGCGTTCACCAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GCAATTCCCGCAGGGAGAGGTCAATATTGTCCAGCTTaGTATCTGCATCAGAAATTAGAATGTGCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: AIPAGRGQYCPA*YLHQKLECALC
Trigger: GCACAGAGCACATTCTAATTTCTGATGCAGATACCAAGCTGGACAATATTGACCTCTCCCTGCGGGAATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GATGTTGAGATCATACACTGGAAAGGACGCATGAAGTaGAACAGATGGATTGGGTCCATTGTAGCAACAGCC +
Preference number: 6 (lower is better)
Translates to: DVEIIHWKGRMK*NRWIGSIVATA
Trigger: GGCTGTTGCTACAATGGACCCAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGTGTATGATCTCAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GTCTACTGGGTATACCGTGATGTTGAGATCATACACTaGAAAGGACGCATGAAGTGGAACAGATGGATTGGG +
Preference number: 6 (lower is better)
Translates to: VYWVYRDVEIIH*KGRMKWNRWIG
Trigger: CCCAATCCATCTGTTCCACTTCATGCGTCCTTTCCAGTGTATGATCTCAACATCACGGTATACCCAGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp ACAACAAACACGGGACCTATTGCAATGGAAGGTGGCTaGTTGTCTACTGGGTATACCGTGATGTTGAGATCA +
Preference number: 6 (lower is better)
Translates to: TTNTGPIAMEGG*LSTGYTVMLRS
Trigger: TGATCTCAACATCACGGTATACCCAGTAGACAACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp ATCTACAACAAACACGGGACCTATTGCAATGGAAGGTaGCTGGTTGTCTACTGGGTATACCGTGATGTTGAG +
Preference number: 6 (lower is better)
Translates to: IYNKHGTYCNGR*LVVYWVYRDVE
Trigger: CTCAACATCACGGTATACCCAGTAGACAACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTTGTTGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp GGCAATTCCCGCAGGGAGAGGTCAATATTGTCCAGCTaGGTATCTGCATCAGAAATTAGAATGTGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: GNSRRERSILSS*VSASEIRMCSV
Trigger: CACAGAGCACATTCTAATTTCTGATGCAGATACCAAGCTGGACAATATTGACCTCTCCCTGCGGGAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp ACAAACACGGGACCTATTGCAATGGAAGGTGGCTGGTaGTCTACTGGGTATACCGTGATGTTGAGATCATAC +
Preference number: 6 (lower is better)
Translates to: TNTGPIAMEGGW*STGYTVMLRSY
Trigger: GTATGATCTCAACATCACGGTATACCCAGTAGACAACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 90 bp TCATCTACAACAAACACGGGACCTATTGCAATGGAAGGTGGCTGGTaGTCTACTGGGTATACCGTGATGTTGAGATCATACACTGGAAAG +
Preference number: 6 (lower is better)
Translates to: SSTTNTGPIAMEGGW*STGYTVMLRSYTGK
Trigger: CTTTCCAGTGTATGATCTCAACATCACGGTATACCCAGTAGACAACCAGCCACCTTCCATTGCAATAGGTCCCGTGTTTGTTGTAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp ATTCAGGCACCTCCAGCACATTGTTACTCATATGGATaGTGTTACAGTCTGGTTCCAGGAGATAGACCCACA +
Preference number: 6 (lower is better)
Translates to: IQAPPAHCYSYG*CYSLVPGDRPT
Trigger: TGTGGGTCTATCTCCTGGAACCAGACTGTAACATCATCCATATGAGTAACAATGTGCTGGAGGTGCCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp TCCAGAACTGATGTAGTCAAGGAGGTCAGGATGAACTaGTCCACTTCCAGAATAAACACGGCCATGAATGCA +
Preference number: 6 (lower is better)
Translates to: SRTDVVKEVRMN*STSRINTAMNA
Trigger: TGCATTCATGGCCGTGTTTATTCTGGAAGTGGATCAGTTCATCCTGACCTCCTTGACTACATCAGTTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp ACAGCGCTGATGATGGAAGAGTCCAGCTCTTTCATCTaGCCCTCACACACAGTAATATTCTGCACTACAAAG +
Preference number: 6 (lower is better)
Translates to: TALMMEESSSFI*PSHTVIFCTTK
Trigger: CTTTGTAGTGCAGAATATTACTGTGTGTGAGGGTCAGATGAAAGAGCTGGACTCTTCCATCATCAGCGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 72 bp GAACTGATCCACTTCCAGAATAAACACGGCCATGAATaGAGCCTTTGGAATCTGATTCGGAATTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: ELIHFQNKHGHE*SLWNLIRNSSS
Trigger: AGAGCTGGAATTCCGAATCAGATTCCAAAGGCTGCATTCATGGCCGTGTTTATTCTGGAAGTGGATCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp AGGTTCTTCCCACACTCTCCCATTCACAATAAAGCCTaGGTTTGTCCCATCTGTGGCCATGAAAGTAAAGCA +
Preference number: 6 (lower is better)
Translates to: RFFPHSPIHNKA*VCPICGHESKA
Trigger: TGCTTTACTTTCATGGCCACAGATGGGACAAACCAAGGCTTTATTGTGAATGGGAGAGTGTGGGAAGAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000486223.1
CDS CAA 72 bp TGGGACAAGCCATTGAATTCAGGCACCTCCAGCACATaGTTACTCATATGGATGATGTTACAGTCTGGTTCC +
Preference number: 6 (lower is better)
Translates to: WDKPLNSGTSST*LLIWMMLQSGS
Trigger: GGAACCAGACTGTAACATCATCCATATGAGTAACAATGTGCTGGAGGTGCCTGAATTCAATGGCTTGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp GGCATGAGGTCAGCCTTTAAGACTGGTGGCTCATCGTaGACAGGGAATACCTCAACATGTAGTACAAATTCT +
Preference number: 6 (lower is better)
Translates to: GMRSAFKTGGSS*TGNTSTCSTNS
Trigger: AGAATTTGTACTACATGTTGAGGTATTCCCTGTCAACGATGAGCCACCAGTCTTAAAGGCTGACCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp GTGTACATAGCAAACTGTCTGCCCCACTACATCCATTaGGCTGAAGTTTGTAATGGGAACTCCAGGATAGTG +
Preference number: 6 (lower is better)
Translates to: VYIANCLPHYIH*AEVCNGNSRIV
Trigger: CACTATCCTGGAGTTCCCATTACAAACTTCAGCCAAATGGATGTAGTGGGGCAGACAGTTTGCTATGTACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000466679.1
ENST00000485068.5
ENST00000497634.2
CDS CAA 90 bp GAGGATTGTAATGTTAAAGCAGATCCCATGCAAAGTACCGCCATGTaGGTTACTGACAGAAAATGTGAACTGGACATCTCTGCAATGGGG +
Preference number: 6 (lower is better)
Translates to: EDCNVKADPMQSTAM*VTDRKCELDISAMG
Trigger: CCCCATTGCAGAGATGTCCAGTTCACATTTTCTGTCAGTAACCAACATGGCGGTACTTTGCATGGGATCTGCTTTAACATTACAATCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp CCATGTTTTGGGCCTTGTAGAATTTTAAAGATGATCTaGTCGTCCTCAGTGTCAGGGTCTGATGCCTTCAAC +
Preference number: 6 (lower is better)
Translates to: PCFGPCRILKMI*SSSVSGSDAFN
Trigger: GTTGAAGGCATCAGACCCTGACACTGAGGACGATCAGATCATCTTTAAAATTCTACAAGGCCCAAAACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS TCA 72 bp AAATTTGAGGAGTGGCCGAGTTCCCTGTGGGGTCCATaGTTTGAAATTCCACGGTATCTGAATTTACTTCCA +
Preference number: 6 (lower is better)
Translates to: KFEEWPSSLWGP*FEIPRYLNLLP
Trigger: TGGAAGTAAATTCAGATACCGTGGAATTTCAAATCATGGACCCCACAGGGAACTCGGCCACTCCTCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS TCA 72 bp CATGTAGTACAAATTCTGCTGAATTTGTGCCATCGGTaGCCTCCAAGAGTAGGTCATCCTGAAGAACTTCAG +
Preference number: 6 (lower is better)
Translates to: HVVQILLNLCHR*PPRVGHPEELQ
Trigger: CTGAAGTTCTTCAGGATGACCTACTCTTGGAGGTCACCGATGGCACAAATTCAGCAGAATTTGTACTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp GGGTTGATTATAATAGAAAATGGTATCTCCAAGGAGTaGTGCTTCCCATCTGTGACGTACACCGTGAACTGG +
Preference number: 6 (lower is better)
Translates to: GLIIIENGISKE*CFPSVTYTVNW
Trigger: CCAGTTCACGGTGTACGTCACAGATGGGAAGCATCACTCCTTGGAGATACCATTTTCTATTATAATCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS GCA 72 bp ATCTGCTGTTCTGATGGAGATGTGGACTGTCATAGGTaGACTCCTTTCAAAGAAGAAGTCGTATACCTCCAA +
Preference number: 6 (lower is better)
Translates to: ICCSDGDVDCHR*TPFKEEVVYLQ
Trigger: TTGGAGGTATACGACTTCTTCTTTGAAAGGAGTGCACCTATGACAGTCCACATCTCCATCAGAACAGCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp CACTTCCAGAATAAACACGGCCATGAATGCAGCCTTTaGAATCTGATTCGGAATTCCAGCTCTGATATAGAC +
Preference number: 6 (lower is better)
Translates to: HFQNKHGHECSL*NLIRNSSSDID
Trigger: GTCTATATCAGAGCTGGAATTCCGAATCAGATTCCAAAGGCTGCATTCATGGCCGTGTTTATTCTGGAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp TTATATGGATTGTTGCCACCTGTGGCACTGAAAGATTaGGAGGTTCATGGCTGTCCCACAGGACAAATTGAA +
Preference number: 6 (lower is better)
Translates to: LYGLLPPVALKD*EVHGCPTGQIE
Trigger: TTCAATTTGTCCTGTGGGACAGCCATGAACCTCCAAATCTTTCAGTGCCACAGGTGGCAACAATCCATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 90 bp CTTGCTCTTGTGTACATAGCAAACTGTCTGCCCCACTACATCCATTaGGCTGAAGTTTGTAATGGGAACTCCAGGATAGTGAACATATTC +
Preference number: 6 (lower is better)
Translates to: LALVYIANCLPHYIH*AEVCNGNSRIVNIF
Trigger: GAATATGTTCACTATCCTGGAGTTCCCATTACAAACTTCAGCCAAATGGATGTAGTGGGGCAGACAGTTTGCTATGTACACAAGAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000466679.1
ENST00000485068.5
ENST00000497634.2
CDS GCA 72 bp TCCACTGGGAGGATTGTAATGTTAAAGCAGATCCCATaGAAAGTACCGCCATGTTGGTTACTGACAGAAAAT +
Preference number: 6 (lower is better)
Translates to: STGRIVMLKQIP*KVPPCWLLTEN
Trigger: ATTTTCTGTCAGTAACCAACATGGCGGTACTTTGCATGGGATCTGCTTTAACATTACAATCCTCCCAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp ATGTTAAAGCAGATCCCATGCAAAGTACCGCCATGTTaGTTACTGACAGAAAATGTGAACTGGACATCTCTG +
Preference number: 6 (lower is better)
Translates to: MLKQIPCKVPPC*LLTENVNWTSL
Trigger: CAGAGATGTCCAGTTCACATTTTCTGTCAGTAACCAACATGGCGGTACTTTGCATGGGATCTGCTTTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp CTGAGCAGATTTTTATCAATCGCTTGGGACAAGCCATaGAATTCAGGCACCTCCAGCACATTGTTACTCATA +
Preference number: 6 (lower is better)
Translates to: LSRFLSIAWDKP*NSGTSSTLLLI
Trigger: TATGAGTAACAATGTGCTGGAGGTGCCTGAATTCAATGGCTTGTCCCAAGCGATTGATAAAAATCTGCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp ATCATAATCGAATCTGAGCAGATTTTTATCAATCGCTaGGGACAAGCCATTGAATTCAGGCACCTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: IIIESEQIFINR*GQAIEFRHLQH
Trigger: GTGCTGGAGGTGCCTGAATTCAATGGCTTGTCCCAAGCGATTGATAAAAATCTGCTCAGATTCGATTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CAA 72 bp CCAGTCCCTCCCTATCTTAAGCTGAAGTTGCCCATTTaGGGGAAGCCTTTCAAATACATAGTAAATCTTCTC +
Preference number: 6 (lower is better)
Translates to: PVPPYLKLKLPI*GKPFKYIVNLL
Trigger: GAGAAGATTTACTATGTATTTGAAAGGCTTCCCCAAAATGGGCAACTTCAGCTTAAGATAGGGAGGGACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380880.4
ENST00000497634.2
CDS CAA 90 bp AGCCATCCTATCATAATCGAATCTGAGCAGATTTTTATCAATCGCTaGGGACAAGCCATTGAATTCAGGCACCTCCAGCACATTGTTACT +
Preference number: 6 (lower is better)
Translates to: SHPIIIESEQIFINR*GQAIEFRHLQHIVT
Trigger: AGTAACAATGTGCTGGAGGTGCCTGAATTCAATGGCTTGTCCCAAGCGATTGATAAAAATCTGCTCAGATTCGATTATGATAGGATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp GTAAAGTCTGAGCTTCACTGTGTCTTCATCAAGAATTaGACAACCATTGTGAACATACTTGACTTCGTTGGG +
Preference number: 6 (lower is better)
Translates to: VKSELHCVFIKN*TTIVNILDFVG
Trigger: CCCAACGAAGTCAAGTATGTTCACAATGGTTGTCCAATTCTTGATGAAGACACAGTGAAGCTCAGACTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS CCA 72 bp CAGCACATTGTTACTCATATGGATGATGTTACAGTCTaGTTCCAGGAGATAGACCCACAGGATAAAAGTTTC +
Preference number: 6 (lower is better)
Translates to: QHIVTHMDDVTV*FQEIDPQDKSF
Trigger: GAAACTTTTATCCTGTGGGTCTATCTCCTGGAACCAGACTGTAACATCATCCATATGAGTAACAATGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4
CDS TCA 72 bp CAAACCCACATTCTCACAGACTTCATATTCGGTCTGTaGCCATTCAATATGAGACCACTTCAGTTCCAAAAT +
Preference number: 6 (lower is better)
Translates to: QTHILTDFIFGL*PFNMRPLQFQN
Trigger: ATTTTGGAACTGAAGTGGTCTCATATTGAATGGTCACAGACCGAATATGAAGTCTGTGAGAATGTGGGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380880.4
ENST00000380894.5
ENST00000427623.5
ENST00000486223.1
CDS CCA 72 bp ATGGTTTTAAGTATCTTATGTTTCCCATCTGACAATTaGATTGTAAAATCATCAGCAAGGCTCTCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: MVLSILCFPSDN*IVKSSARLSES
Trigger: TGACTCAGAGAGCCTTGCTGATGATTTTACAATCCAATTGTCAGATGGGAAACATAAGATACTTAAAACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380875.7
ENST00000380880.4