Pregenerated sensors for FOXS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000179772Ensembl transcript IDs: ENST00000375978.5
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTaGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: LAEHRFNPGFLCGCP*LTRAGSFESSSGPR Trigger: TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| 3UTR-3UTR TCA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCGCTCAGCCCGGAGGGTaGGGGACCTGCAGGGACTGC | + |
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Preference number: 2 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGAQPGG*GTCRDC Trigger: GCAGTCCCTGCAGGTCCCTCACCCTCCGGGCTGAGC...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| 3UTR GCA 72 bp | GGCCCTGAGAGCCACAGAGTAAATCCCAAGAGGCCCTaGTTCCCCTCACCCCCAAGTTTGTCCGGAGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: GPESHRVNPKRP*FPSPPSLSGGP Trigger: GGGGCCTCCGGACAAACTTGGGGGTGAGGGGAAGCAGGGCCTCTTGGGATTTACTCTGTGGCTCTCAGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCCAGTGGGGCCCGGAGTaGGCCTGGAGGGGTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGQWGPE*AWRGGW Trigger: CCACCCACCCCTCCAGGCTCACTCCGGGCCCCACTG...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTGGCCCGGGCAGAGGCTaGTGCTGCATGCTGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GPRGLAEHRFNPGFLCGCGPGRG*CCMLAG Trigger: CCCGGCCAGCATGCAGCAGCAGCCTCTGCCCGGGCC...ACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | CCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTCCTGGCTGGTCGCCCTaGGGGGTCCACGGCGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PRGLAEHRFNPGFLCGCPPGWSP*GVHGVP Trigger: AGGCACGCCGTGGACCCCTCAGGGCGACCAGCCAGG...AGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | GGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTGCTCAGCCCGGAGGGTaGGGGACCTGCAGGGACTGC | + |
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Preference number: 4 (lower is better) Translates to: GPRGLAEHRFNPGFLCGCAQPGG*GTCRDC Trigger: GCAGTCCCTGCAGGTCCCTCACCCTCCGGGCTGAGC...ACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTGGCGGGGCCCCGGGTaGCCTCAGCACCTGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GAWLSTASILAFCVVVLGWRGPG*PQHLSA Trigger: GGCAGACAGGTGCTGAGGGCACCCGGGGCCCCGCCA...GCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | CCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTGGCCCGCTGCCCCGGTaGGCTCTGGATGGCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: PRGLAEHRFNPGFLCGCPGPLPR*ALDGHS Trigger: GCTATGGCCATCCAGAGCTCACCGGGGCAGCGGGCC...AGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | CCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGAGCGGTAGATGCCACTaGGGGTGGCCCGCTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PWLTRAGSFESSSGPRARSGRCH*GWPAAP Trigger: CGGGGCAGCGGGCCACCCTCAGTGGCATCTACCGCT...CCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCGGTGGGAATGAGCACTaGCTGCCGGTCGTGGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGGGNEH*LPVVAL Trigger: CAACGCCACGACCGGCAGGCAGTGCTCATTCCCACC...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTGGGCACATACTGGCTaGCATGGCCCCCACCAGACC | + |
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Preference number: 4 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGWAHTG*HGPHQT Trigger: GGTCTGGTGGGGGCCATGCCAGCCAGTATGTGCCCA...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGACACCTGTCTGCCGGGTaGAGCGGCGGCGGCGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: GCPWLTRAGSFESSSGPRHLSAG*SGGGGV Trigger: TACGCCGCCGCCGCCGCTTCACCCGGCAGACAGGTG...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCACCGGGCAGAGGCTGCTaGTGCATGCTGGCCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPPGRGC*CMLAGL Trigger: CAGCCCGGCCAGCATGCAGCAGCAGCCTCTGCCCGG...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCACCCTCAGCACCTGTCTaGCGGGTGAAGCGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPPSAPV*RVKRRR Trigger: CCGCCGCCGCTTCACCCGGCAGACAGGTGCTGAGGG...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCGCCGACACTGGTAGCTaGTCCCGATGCCTGATTCCG | + |
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Preference number: 4 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGADTGS*SRCLIP Trigger: CGGAATCAGGCATCGGGAGCAGCTACCAGTGTCGGC...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | TGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGCTCTGGTTGGCTCAGTTGTaGGGGCGCCAGGCCCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: WLTRAGSFESSSGPRARLWLAQL*GRQARA Trigger: TGCCCGGGCCTGGCGCCCCCACAACTGAGCCAACCA...GAGCCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTACTGCCTGCCGGTCGTaGCGTTGGGGACTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GPRGLAEHRFNPGFLCGCTACRS*RWGLLG Trigger: ACCCAGGAGTCCCCAACGCCACGACCGGCAGGCAGT...ACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCAGGGACTGCCCGAGGTaGGGCTGCCTTTACTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGRDCPR*GCLYSK Trigger: CTTTGAGTAAAGGCAGCCTCACCTCGGGCAGTCCCT...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGCTGCATGCTGGCCGGGCTaGCAGGCTGCTGGGACCTGC | + |
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Preference number: 4 (lower is better) Translates to: EHRFNPGFLCGCPWLTRAACWPG*QAAGTC Trigger: GCAGGTCCCAGCAGCCTGGCAGCCCGGCCAGCATGC...AGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGTGGGTGGCCGAGGCCTaGCATCAGTGGTTGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PWLTRAGSFESSSGPRARWVAEA*HQWLLG Trigger: GCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCA...CCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCATGCCGGTCGTGGCGTTaGGGACTCCTGGGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPCRSWR*GLLGPG Trigger: GCCAGGACCCAGGAGTCCCCAACGCCACGACCGGCA...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCGAGGCCTGCCATCAGTaGTTGCTGGGCACATACTGG | + |
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Preference number: 4 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGEACHQ*LLGTYW Trigger: CCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTC...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTTTCCTTGTGGTCAGTTaGCAGGGGCAGTGGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GPRGLAEHRFNPGFLCGCFLVVS*QGQWGP Trigger: CGGGCCCCACTGCCCCTGCCAACTGACCACAAGGAA...ACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGGGGTCAGCCCCAATaGGTAGCCGGAGCCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPGGQPQ*VAGASL Trigger: CAGGGAGGCTCCGGCTACCCATTGGGGCTGACCCCC...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGACCCCAGGGGCCTGGCTaGGCACCGCTTCAATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCPWLTRAGSFESSSGPRPQGPG*APLQSW Trigger: CCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGG...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCTGAGGGTGGCCCGCTaGCCCGGTGAGCTCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: VVLGSPGLGPSRVLQVLELRVAR*PGELWM Trigger: CATCCAGAGCTCACCGGGGCAGCGGGCCACCCTCAG...CTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCTCCAGTAGCTGCCCTTaGCTGGCTTGCGGTCATCGC | + |
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Preference number: 4 (lower is better) Translates to: APGAWLSTASILAFCVVVSSSCP*LACGHR Trigger: GCGATGACCGCAAGCCAGGCAAGGGCAGCTACTGGA...GACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | CCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGGCTGAGGCCAAGAGGTaGTCAAGGCCTGGGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PWLTRAGSFESSSGPRARAEAKR*SRPGSA Trigger: GGCTGACCCAGGCCTTGAGCACCTCTTGGCCTCAGC...CCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGCTCAGTAGGGAGGCTTGGTTaGCTCAGTTGTGGGGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GSPGLGPSRVLQVLEPGSVGRLG*LSCGGA Trigger: GGCGCCCCCACAACTGAGCCAACCAAGCCTCCCTAC...TGAGCCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGGGACTCCTGGGTCCTaGCTGGTCGCCCTGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GCPWLTRAGSFESSSGPRGTPGS*LVALRG Trigger: ACCCCTCAGGGCGACCAGCCAGGACCCAGGAGTCCC...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCACGGGGAGCTCCCCTaGGCATGCAGGCTTGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: VVLGSPGLGPSRVLQVLEHGELP*ACRLGR Trigger: ACGCCCAAGCCTGCATGCCCAGGGGAGCTCCCCGTG...CTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTGTGTGGTTGTCCTTaGCTCACCAGGGCTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: APGAWLSTASILAFCVVVLCGCP*LTRAGS Trigger: GGACCCAGCCCTGGTGAGCCAAGGACAACCACACAG...GACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | GCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCAGGCGAATCGGCCCATaGTGTAGCGGTAGATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: APGAWLSTASILAFCVVVRRIGP*CSGRCH Trigger: GTGGCATCTACCGCTACATCATGGGCCGATTCGCCT...GACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | TGTGTGGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCGCTGCTCCCGATGCCTaGTTCCGGGGACAAGACGGG | + |
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Preference number: 4 (lower is better) Translates to: CVVVLGSPGLGPSRVLQVAAPDA*FRGQDG Trigger: CCCGTCTTGTCCCCGGAATCAGGCATCGGGAGCAGC...GACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | AGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGCTGAGGGGAGGGGGCTGCTaGGGCCAAGAGGTGCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: STASILAFCVVVLGSPGLRGGGC*GQEVLK Trigger: CTTGAGCACCTCTTGGCCTCAGCAGCCCCCTCCCCT...CAGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | TCACATGGCTTTATTGGCCCTGAGAGCCACAGAGTAAATCCCAAGAGGCCCTGCGCCGGGCTGCCAGGCTaGTGGGACCTGCTGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SHGFIGPESHRVNPKRPCAGLPG*WDLLGQ Trigger: CTGACCCAGCAGGTCCCAGCAGCCTGGCAGCCCGGC...GCAGGGCCTCTTGGGATTTACTCTGTGGCTCTCAGGGCCAATAAAGCCATGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGAATGAGCACTGCCTaGCGGTCGTGGCGTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPGMSTA*RSWRWG Trigger: TCCCCAACGCCACGACCGGCAGGCAGTGCTCATTCC...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGCTCAGAGCTCCCCTGGGCATaGAGGCTTGGGCGTGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: GSPGLGPSRVLQVLEPGSELPWA*RLGRGN Trigger: ATTTCCACGCCCAAGCCTGCATGCCCAGGGGAGCTC...TGAGCCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGTAGCTGCCCTTGCCTaGCTTGCGGTCATCGCGGGG | + |
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Preference number: 4 (lower is better) Translates to: AEHRFNPGFLCGCPWLTRVAALA*LAVIAG Trigger: CCCCGCGATGACCGCAAGCCAGGCAAGGGCAGCTAC...CCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR TCA 90 bp | AGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGCTGCAGCTCTGGTGGGAATaGGCACTGCCTGCCGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: STASILAFCVVVLGSPGLQLWWE*ALPAGR Trigger: ACGACCGGCAGGCAGTGCTCATTCCCACCAGAGCTG...CAGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGACAGGCTGCTGGGACCTaGTGGGTCAGGCTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GCPWLTRAGSFESSSGPRQAAGT*WVRLSF Trigger: GAAGCTGAGCCTGACCCAGCAGGTCCCAGCAGCCTG...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | TGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGCTCGACAGGGAAGCCACCTaGAACCCAGGGTTCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: WLTRAGSFESSSGPRARLDREAT*NPGFLV Trigger: CACAAGGAACCCTGGGTTGCAGGTGGCTTCCCTGTC...GAGCCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | GGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCAGCTGTAGGGAGGCTTaGTTGGCTCAGTTGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GAWLSTASILAFCVVVLGSCREA*LAQLWG Trigger: CCCCCACAACTGAGCCAACCAAGCCTCCCTACAGCT...GCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | CCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTTCTCTTTGGGCTCCATaGGTGGCCGAGGCCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PGAWLSTASILAFCVVVLSLWAP*VAEACH Trigger: ATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGA...AAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CCA 90 bp | CCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGGAGGTGCTCAAGGCCTaGGTCAGCCCCCATGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PWLTRAGSFESSSGPRAREVLKA*VSPHAK Trigger: TTTTGCATGGGGGCTGACCCAGGCCTTGAGCACCTC...CCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCACCTGCCATCAGTGGTTaGTGGGCACATACTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPPAISG*WAHTGW Trigger: CCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGG...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | GTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGACATACTGGCTGGCATaGCCCCCACCAGACCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VVLGSPGLGPSRVLQVLETYWLA*PPPDPQ Trigger: TTGGGGGTCTGGTGGGGGCCATGCCAGCCAGTATGT...CTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGTTTGGGCTCCATGGGTaGCCGAGGCCTGCCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AEHRFNPGFLCGCPWLTRFGLHG*PRPAIS Trigger: ACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAA...CCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGCGTGGAAATCTCTTTaGGCTCCATGGGTGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPAWKSL*APWVAE Trigger: CTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGC...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTCTGGGCATGCAGGCTTaGGCGTGGAAATCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRGLAEHRFNPGFLCGCPLGMQA*AWKSLW Trigger: CCAAAGAGATTTCCACGCCCAAGCCTGCATGCCCAG...AGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGCTGATGAGGAAGATGAGGTaGCCACGGGGAGCTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STASILAFCVVVLGSPGLMRKMR*PRGAPL Trigger: CAGGGGAGCTCCCCGTGGCCACCTCATCTTCCTCAT...CAGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR GCA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGGTAGCTGCTCCCGATaGCTGATTCCGGGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCPWLTRAGSFESSSGPRGSCSR*LIPGTR Trigger: TCTTGTCCCCGGAATCAGGCATCGGGAGCAGCTACC...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | TGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGCTCATGCAGGCTTGGGCGTaGAAATCTCTTTGGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLTRAGSFESSSGPRARLMQAWA*KSLWAP Trigger: TGGAGCCCAAAGAGATTTCCACGCCCAAGCCTGCAT...GAGCCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAACCCAGGGTTCCTTGTaGTCAGTTGGCAGGGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GCPWLTRAGSFESSSGPRTQGSL*SVGRGS Trigger: ACTGCCCCTGCCAACTGACCACAAGGAACCCTGGGT...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | GTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCATTGGCTCACCAGGGCTaGGTCCTTCGAGAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGSPGLGPSRVLQVLEPLAHQG*VLREFF Trigger: GAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAA...TGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR TCA 90 bp | GAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGCTAAAACTCTCAGCCTCTaGGAAGCCGGCAGGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EHRFNPGFLCGCPWLTRAKTLSL*EAGRKA Trigger: GGCTTTCCTGCCGGCTTCTCAGAGGCTGAGAGTTTT...AGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGCAAAGCTTAGGCCCTTaGGATCTGGCAGCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEHRFNPGFLCGCPWLTRQSLGP*DLAALV Trigger: CACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTTTG...CCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCGCCATCAGTGGTTGCTaGGCACATACTGGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CVVVLGSPGLGPSRVLQVAISGC*AHTGWH Trigger: ATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGC...GACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR GCA 90 bp | TCACATGGCTTTATTGGCCCTGAGAGCCACAGAGTAAATCCCAAGAGGCCCTGCGGCGGCGTAGGAAGCTaGCGTGCTCAAACATGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SHGFIGPESHRVNPKRPCGGVGS*RAQTCR Trigger: ACGACATGTTTGAGCACGGCAGCTTCCTACGCCGCC...GCAGGGCCTCTTGGGATTTACTCTGTGGCTCTCAGGGCCAATAAAGCCATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTCATGCAAAAATTCAGTaGCTGCAGCCGACACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRGLAEHRFNPGFLCGCPHAKIQ*LQPTLV Trigger: TACCAGTGTCGGCTGCAGGCACTGAATTTTTGCATG...AGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | GAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGCTTCCTGGCTTTCTGTGTaGTTGTCCTTGGCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EHRFNPGFLCGCPWLTRASWLSV*LSLAHQ Trigger: CTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGA...AGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCTCACCAGGGCTGGCACCGCTTCAATCCTaGCTTTCTGTGTGGTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STASILAFCVVVLGSPGLAPLQS*LSVWLS Trigger: GGACAACCACACAGAAAGCCAGGATTGAAGCGGTGC...CAGCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR TCA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGATGGCTTTATTGGCCCTaGGAGCCACAGAGTAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GCPWLTRAGSFESSSGPRWLYWP*EPQSKS Trigger: GGATTTACTCTGTGGCTCTCAGGGCCAATAAAGCCA...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CCA 90 bp | TCATCACATGGCTTTATTGGCCCTGAGAGCCACAGAGTAAATCCCAAGAGGCCCTGCCCCGGTGAGCTCTaGATGGCCATAGCAATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHGFIGPESHRVNPKRPCPGEL*MAIAIR Trigger: CCTTATTGCTATGGCCATCCAGAGCTCACCGGGGCA...GGGCCTCTTGGGATTTACTCTGTGGCTCTCAGGGCCAATAAAGCCATGTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 90 bp | GGGCGCCAGGCCCGGGCAGAGGCTGCTGCTGCATGCTGGCCGGGCTaGCAGGCTGCTGGGACCTGCTGGGTCAGGCTCAGCTTCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRQARAEAAAACWPG*QAAGTCWVRLSFQG Trigger: GCCCTGGAAGCTGAGCCTGACCCAGCAGGTCCCAGCAGCCTGGCAGCCCGGCCAGCATGCAGCAGCAGCCTCTGCCCGGGCCTGGCGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS CCA 90 bp | CAGTTGTGGGGGCGCCAGGCCCGGGCAGAGGCTGCTGCTGCATGCTaGCCGGGCTGCCAGGCTGCTGGGACCTGCTGGGTCAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLWGRQARAEAAAAC*PGCQAAGTCWVRLS Trigger: GCTGAGCCTGACCCAGCAGGTCCCAGCAGCCTGGCAGCCCGGCCAGCATGCAGCAGCAGCCTCTGCCCGGGCCTGGCGCCCCCACAACTG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | GAGCCTCCCTGGACAGGGAAGCCACCTGCAACCCAGGGTTCCTTGTaGTCAGTTGGCAGGGGCAGTGGGGCCCGGAGTGAGCCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPPWTGKPPATQGSL*SVGRGSGARSEPGG Trigger: CCCTCCAGGCTCACTCCGGGCCCCACTGCCCCTGCCAACTGACCACAAGGAACCCTGGGTTGCAGGTGGCTTCCCTGTCCAGGGAGGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 90 bp | TTAGGCCCTTGGGATCTGGCAGCTCTGGTGGGAATGAGCACTGCCTaGCGGTCGTGGCGTTGGGGACTCCTGGGTCCTGGCTGGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LGPWDLAALVGMSTA*RSWRWGLLGPGWSP Trigger: GGGCGACCAGCCAGGACCCAGGAGTCCCCAACGCCACGACCGGCAGGCAGTGCTCATTCCCACCAGAGCTGCCAGATCCCAAGGGCCTAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | ATGAGGTGGCCACGGGGAGCTCCCCTGGGCATGCAGGCTTGGGCGTaGAAATCTCTTTGGGCTCCATGGGTGGCCGAGGCCTGCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: MRWPRGAPLGMQAWA*KSLWAPWVAEACHQ Trigger: CTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGCCTGCATGCCCAGGGGAGCTCCCCGTGGCCACCTCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | AGGAAGATGAGGTGGCCACGGGGAGCTCCCCTGGGCATGCAGGCTTaGGCGTGGAAATCTCTTTGGGCTCCATGGGTGGCCGAGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RKMRWPRGAPLGMQA*AWKSLWAPWVAEAC Trigger: GCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGCCTGCATGCCCAGGGGAGCTCCCCGTGGCCACCTCATCTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CAA 90 bp | GGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCCTGCCGGTCGTGGCGTaGGGGACTCCTGGGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAWLSTASILAFCVVVLGLPVVA*GTPGSW Trigger: CCAGGACCCAGGAGTCCCCAACGCCACGACCGGCAG...GCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 90 bp | AAGCTTAGGCCCTTGGGATCTGGCAGCTCTGGTGGGAATGAGCACTaGCTGCCGGTCGTGGCGTTGGGGACTCCTGGGTCCTGGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KLRPLGSGSSGGNEH*LPVVALGTPGSWLV Trigger: GACCAGCCAGGACCCAGGAGTCCCCAACGCCACGACCGGCAGGCAGTGCTCATTCCCACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | TACTGGCTGGCATGGCCCCCACCAGACCCCCAAAGCTTAGGCCCTTaGGATCTGGCAGCTCTGGTGGGAATGAGCACTGCCTGCCGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YWLAWPPPDPQSLGP*DLAALVGMSTACRS Trigger: CGACCGGCAGGCAGTGCTCATTCCCACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTTTGGGGGTCTGGTGGGGGCCATGCCAGCCAGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | CTCTTTGGGCTCCATGGGTGGCCGAGGCCTGCCATCAGTGGTTGCTaGGCACATACTGGCTGGCATGGCCCCCACCAGACCCCCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFGLHGWPRPAISGC*AHTGWHGPHQTPKA Trigger: AGCTTTGGGGGTCTGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CAA 90 bp | CCAAGTTTGTCCGGAGGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTCTGTGTGGTTGTCCTaGGCTCACCAGGGCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLSGGPRGLAEHRFNPGSVWLS*AHQGWV Trigger: GACCCAGCCCTGGTGAGCCAAGGACAACCACACAGA...GCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCCTCCGGACAAACTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 90 bp | GCTTGGGCGTGGAAATCTCTTTGGGCTCCATGGGTGGCCGAGGCCTaGCATCAGTGGTTGCTGGGCACATACTGGCTGGCATGGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AWAWKSLWAPWVAEA*HQWLLGTYWLAWPP Trigger: TGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | TGGAAATCTCTTTGGGCTCCATGGGTGGCCGAGGCCTGCCATCAGTaGTTGCTGGGCACATACTGGCTGGCATGGCCCCCACCAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: WKSLWAPWVAEACHQ*LLGTYWLAWPPPDP Trigger: GGGGTCTGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | AGAAGCCGGCAGGAAAGCCAAACGCTGGGCATGAGGAAGATGAGGTaGCCACGGGGAGCTCCCCTGGGCATGCAGGCTTGGGCGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSRQESQTLGMRKMR*PRGAPLGMQAWAWK Trigger: TTTCCACGCCCAAGCCTGCATGCCCAGGGGAGCTCCCCGTGGCCACCTCATCTTCCTCATGCCCAGCGTTTGGCTTTCCTGCCGGCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 90 bp | AATCTCTTTGGGCTCCATGGGTGGCCGAGGCCTGCCATCAGTGGTTaGTGGGCACATACTGGCTGGCATGGCCCCCACCAGACCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NLFGLHGWPRPAISG*WAHTGWHGPHQTPK Trigger: TTTGGGGGTCTGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 90 bp | GGGCTGCTGAGGCCAAGAGGTGCTCAAGGCCTGGGTCAGCCCCCATaGAAAAATTCAGTGCCTGCAGCCGACACTGGTAGCTGCTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLLRPRGAQGLGQPP*KNSVPAADTGSCSR Trigger: TCGGGAGCAGCTACCAGTGTCGGCTGCAGGCACTGAATTTTTGCATGGGGGCTGACCCAGGCCTTGAGCACCTCTTGGCCTCAGCAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 90 bp | TGGGCATGCAGGCTTGGGCGTGGAAATCTCTTTGGGCTCCATGGGTaGCCGAGGCCTGCCATCAGTGGTTGCTGGGCACATACTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WACRLGRGNLFGLHG*PRPAISGCWAHTGW Trigger: CCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGCCTGCATGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS-3UTR CAA 90 bp | GGCCCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCAAAGCTTAGGCCCTaGGGATCTGGCAGCTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPRGLAEHRFNPGFLCGCPKLRP*GSGSSG Trigger: ACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTTTGG...ACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTGGCGTGGAAATCTCTTaGGGCTCCATGGGTGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PRGLAEHRFNPGFLCGCPGVEIS*GSMGGR Trigger: TCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCC...AGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CAA 90 bp | GGGGCCTGGCTGAGCACCGCTTCAATCCTGGCTTTCTGTGTGGTTGTCCTTGGCCCTGGGCATGCAGGCTaGGGCGTGGAAATCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAWLSTASILAFCVVVLGPGHAG*GVEISL Trigger: CAAAGAGATTTCCACGCCCAAGCCTGCATGCCCAGG...GCCAAGGACAACCACACAGAAAGCCAGGATTGAAGCGGTGCTCAGCCAGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CAA 90 bp | GGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCAGGCTCATGGCTTTCTGTGTGGTaGTCCTTGGCTCACCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPGLGPSRVLQVLEPGSWLSVW*SLAHQG Trigger: GCCCTGGTGAGCCAAGGACAACCACACAGAAAGCCA...TGAGCCTGGCTCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS-3UTR CAA 90 bp | GGTTGTCCTTGGCTCACCAGGGCTGGGTCCTTCGAGAGTTCTTCAGGTCCTAGAGCCTGCCATCAGTGGTaGCTGGGCACATACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCPWLTRAGSFESSSGPRACHQW*LGTYWL Trigger: CAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGC...TCTAGGACCTGAAGAACTCTCGAAGGACCCAGCCCTGGTGAGCCAAGGACAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS GCA 72 bp | GCCTTGGCGGGGCCCCGGGTGCCCTCAGCACCTGTCTaGCGGGTGAAGCGGCGGCGGCGGCGTAGGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALAGPRVPSAPV*RVKRRRRRRKL Trigger: CAGCTTCCTACGCCGCCGCCGCCGCTTCACCCGGCAGACAGGTGCTGAGGGCACCCGGGGCCCCGCCAAGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS CCA 72 bp | TGCCTGCCGGTCGTGGCGTTGGGGACTCCTGGGTCCTaGCTGGTCGCCCTGAGGGGTCCACGGCGTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLPVVALGTPGS*LVALRGPRRAL Trigger: CAAGGCACGCCGTGGACCCCTCAGGGCGACCAGCCAGGACCCAGGAGTCCCCAACGCCACGACCGGCAGGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS CCA 72 bp | GCAGCTCTGGTGGGAATGAGCACTGCCTGCCGGTCGTaGCGTTGGGGACTCCTGGGTCCTGGCTGGTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AALVGMSTACRS*RWGLLGPGWSP Trigger: GGGCGACCAGCCAGGACCCAGGAGTCCCCAACGCCACGACCGGCAGGCAGTGCTCATTCCCACCAGAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS CAA 90 bp | CCGGAGCCTCCCTGGACAGGGAAGCCACCTGCAACCCAGGGTTCCTaGTGGTCAGTTGGCAGGGGCAGTGGGGCCCGGAGTGAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PEPPWTGKPPATQGS*WSVGRGSGARSEPG Trigger: TCCAGGCTCACTCCGGGCCCCACTGCCCCTGCCAACTGACCACAAGGAACCCTGGGTTGCAGGTGGCTTCCCTGTCCAGGGAGGCTCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS GCA 72 bp | GGGCTCCATGGGTGGCCGAGGCCTGCCATCAGTGGTTaGTGGGCACATACTGGCTGGCATGGCCCCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLHGWPRPAISG*WAHTGWHGPHQ Trigger: CTGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
||
| CDS CCA 72 bp | CCACGGGGAGCTCCCCTGGGCATGCAGGCTTGGGCGTaGAAATCTCTTTGGGCTCCATGGGTGGCCGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRGAPLGMQAWA*KSLWAPWVAEA Trigger: GGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGCCTGCATGCCCAGGGGAGCTCCCCGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CAA 72 bp | TCTGGTGGGAATGAGCACTGCCTGCCGGTCGTGGCGTaGGGGACTCCTGGGTCCTGGCTGGTCGCCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGGNEHCLPVVA*GTPGSWLVALR Trigger: CCTCAGGGCGACCAGCCAGGACCCAGGAGTCCCCAACGCCACGACCGGCAGGCAGTGCTCATTCCCACCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 72 bp | CTCCATGGGTGGCCGAGGCCTGCCATCAGTGGTTGCTaGGCACATACTGGCTGGCATGGCCCCCACCAGACC | + |
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Preference number: 6 (lower is better) Translates to: LHGWPRPAISGC*AHTGWHGPHQT Trigger: GGTCTGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 72 bp | AGGTGGCCACGGGGAGCTCCCCTGGGCATGCAGGCTTaGGCGTGGAAATCTCTTTGGGCTCCATGGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RWPRGAPLGMQA*AWKSLWAPWVA Trigger: GGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGCCTGCATGCCCAGGGGAGCTCCCCGTGGCCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CAA 72 bp | TGGGCTCCATGGGTGGCCGAGGCCTGCCATCAGTGGTaGCTGGGCACATACTGGCTGGCATGGCCCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: WAPWVAEACHQW*LGTYWLAWPPP Trigger: TGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 72 bp | CTTTGGGCTCCATGGGTGGCCGAGGCCTGCCATCAGTaGTTGCTGGGCACATACTGGCTGGCATGGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LWAPWVAEACHQ*LLGTYWLAWPP Trigger: TGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 72 bp | GCATGGCCCCCACCAGACCCCCAAAGCTTAGGCCCTTaGGATCTGGCAGCTCTGGTGGGAATGAGCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: AWPPPDPQSLGP*DLAALVGMSTA Trigger: GGCAGTGCTCATTCCCACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTTTGGGGGTCTGGTGGGGGCCATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 72 bp | CAGGAAAGCCAAACGCTGGGCATGAGGAAGATGAGGTaGCCACGGGGAGCTCCCCTGGGCATGCAGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QESQTLGMRKMR*PRGAPLGMQAW Trigger: CCAAGCCTGCATGCCCAGGGGAGCTCCCCGTGGCCACCTCATCTTCCTCATGCCCAGCGTTTGGCTTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CAA 72 bp | GGCATGGCCCCCACCAGACCCCCAAAGCTTAGGCCCTaGGGATCTGGCAGCTCTGGTGGGAATGAGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: GMAPTRPPKLRP*GSGSSGGNEHC Trigger: GCAGTGCTCATTCCCACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTTTGGGGGTCTGGTGGGGGCCATGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CAA 90 bp | ATACTGGCTGGCATGGCCCCCACCAGACCCCCAAAGCTTAGGCCCTaGGGATCTGGCAGCTCTGGTGGGAATGAGCACTGCCTGCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: ILAGMAPTRPPKLRP*GSGSSGGNEHCLPV Trigger: GACCGGCAGGCAGTGCTCATTCCCACCAGAGCTGCCAGATCCCAAGGGCCTAAGCTTTGGGGGTCTGGTGGGGGCCATGCCAGCCAGTAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CAA 90 bp | AAATCTCTTTGGGCTCCATGGGTGGCCGAGGCCTGCCATCAGTGGTaGCTGGGCACATACTGGCTGGCATGGCCCCCACCAGACCCCCAA | + |
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Preference number: 6 (lower is better) Translates to: KSLWAPWVAEACHQW*LGTYWLAWPPPDPQ Trigger: TTGGGGGTCTGGTGGGGGCCATGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS TCA 72 bp | TGCCTGCAGCCGACACTGGTAGCTGCTCCCGATGCCTaGTTCCGGGGACAAGACGGGCGTAGGGGCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: CLQPTLVAAPDA*FRGQDGRRGLI Trigger: AATAAGGCCCCTACGCCCGTCTTGTCCCCGGAATCAGGCATCGGGAGCAGCTACCAGTGTCGGCTGCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS CCA 72 bp | AGGCTTGGGCGTGGAAATCTCTTTGGGCTCCATGGGTaGCCGAGGCCTGCCATCAGTGGTTGCTGGGCACAT | + |
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Preference number: 6 (lower is better) Translates to: RLGRGNLFGLHG*PRPAISGCWAH Trigger: ATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCACGCCCAAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 72 bp | TGGAAATCTCTTTGGGCTCCATGGGTGGCCGAGGCCTaGCATCAGTGGTTGCTGGGCACATACTGGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: WKSLWAPWVAEA*HQWLLGTYWLA Trigger: TGCCAGCCAGTATGTGCCCAGCAACCACTGATGGCAGGCCTCGGCCACCCATGGAGCCCAAAGAGATTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 72 bp | TGCAAAAATTCAGTGCCTGCAGCCGACACTGGTAGCTaGTCCCGATGCCTGATTCCGGGGACAAGACGGGCG | + |
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Preference number: 6 (lower is better) Translates to: CKNSVPAADTGS*SRCLIPGTRRA Trigger: CGCCCGTCTTGTCCCCGGAATCAGGCATCGGGAGCAGCTACCAGTGTCGGCTGCAGGCACTGAATTTTTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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| CDS GCA 72 bp | AGGCCAAGAGGTGCTCAAGGCCTGGGTCAGCCCCCATaGAAAAATTCAGTGCCTGCAGCCGACACTGGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RPRGAQGLGQPP*KNSVPAADTGS Trigger: GCTACCAGTGTCGGCTGCAGGCACTGAATTTTTGCATGGGGGCTGACCCAGGCCTTGAGCACCTCTTGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375978.5 |
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