Pregenerated sensors for FOXR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000189299Ensembl transcript IDs: ENST00000339140.5
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCTTCACATGGCACTCGAGGTTCTCCATGGCTCGGCTCCATCCTaGCTTTTATGCTTTATATTCCACTGTTCACTTTCATGTGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SLHMALEVLHGSAPS*LLCFIFHCSLSCVK Trigger: TTTCACACATGAAAGTGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAACCTCGAGTGCCATGTGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR CCA 90 bp | TCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATaGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SSQVKFSSHGTRGSP*LGSILPFMLYIPLF Trigger: GAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR GCA 90 bp | ATGGCACTCGAGGTTCTCCATGGCTCGGCTCCATCCTGCCTTTTATaGTTTATATTCCACTGTTCACTTTCATGTGTGAAAATACTCTCT | + |
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Preference number: 1 (lower is better) Translates to: MALEVLHGSAPSCLL*FIFHCSLSCVKILS Trigger: AGAGAGTATTTTCACACATGAAAGTGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAACCTCGAGTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR-3UTR CCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTAACTCGAGGTTCTCCATaGCTCGGCTCCATCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PLCSHCCLCNASTPVCHLTRGSP*LGSILP Trigger: AGGCAGGATGGAGCCGAGCCATGGAGAACCTCGAGT...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCAAAGAAAAGTGAGGTTCTaGAGGATAAAATGGGTTACT | + |
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Preference number: 2 (lower is better) Translates to: SFLSSASKMDLDTLAYPQRKVRF*RIKWVT Trigger: AGTAACCCATTTTATCCTTCAGAACCTCACTTTTCT...TTGAGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR GCA 72 bp | ATGGCACTCGAGGTTCTCCATGGCTCGGCTCCATCCTaGCTTTTATGCTTTATATTCCACTGTTCACTTTCA | + |
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Preference number: 3 (lower is better) Translates to: MALEVLHGSAPS*LLCFIFHCSLS Trigger: TGAAAGTGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAACCTCGAGTGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR CCA 72 bp | GTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATaGCTCGGCTCCATCCTGCCTTTTATGCTTTATATT | + |
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Preference number: 3 (lower is better) Translates to: VKFSSHGTRGSP*LGSILPFMLYI Trigger: AATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR GCA 72 bp | GAGGTTCTCCATGGCTCGGCTCCATCCTGCCTTTTATaGTTTATATTCCACTGTTCACTTTCATGTGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: EVLHGSAPSCLL*FIFHCSLSCVK Trigger: TTTCACACATGAAAGTGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| 3UTR-3UTR CAA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTATCCTTTGCTCAAAATTaGGAACAACAGCCACTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PLCSHCCLCNASTPVCHLSFAQN*EQQPLS Trigger: GGAGAGTGGCTGTTGTTCCAAATTTTGAGCAAAGGA...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | AACAGCCACTCTCCTCGTGCGACTTTCCATGACTCTCCACCTGGATTTAAGTTCAGATCTCCTGCACACTaGGGCCACAGTGGGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: NSHSPRATFHDSPPGFKFRSPAH*GHSGGC Trigger: ACAACCCCCACTGTGGCCTCAGTGTGCAGGAGATCT...GAACTTAAATCCAGGTGGAGAGTCATGGAAAGTCGCACGAGGAGAGTGGCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCGGGGGCACAGGATATTaGGGTCCACCCACATCCACA | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGGGTGY*GPPTST Trigger: TGTGGATGTGGGTGGACCCCAATATCCTGTGCCCCC...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCGATCCTCTTTTCCACTaGGCTTTGGGGCCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGDPLFH*ALGPPG Trigger: GCCAGGAGGCCCCAAAGCCCAGTGGAAAAGAGGATC...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | CTCAGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTTTGGGGCCTCCTGGCTaGCAAGGGGGCACAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: LSFLSSASKMDLDTLAYPLGPPG*QGGTGY Trigger: ATATCCTGTGCCCCCTTGGCAGCCAGGAGGCCCCAA...AGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCAGCAGCCCTGGGACCTaGCCATGGAGACTATACCAA | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGSSPGT*PWRLYQ Trigger: TTGGTATAGTCTCCATGGCCAGGTCCCAGGGCTGCT...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCTGGGTCTCCTCTTCTaGGGCATTTCTGGGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LSFLSSASKMDLDTLAYPLGLLF*GISGGF Trigger: GAAGCCCCCAGAAATGCCTCAGAAGAGGAGACCCAG...AGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | TTCCTTTGCTCAAAATTTGGAACAACAGCCACTCTCCTCGTGCGACTTTCCATGGGGGAATGGATACCCTaGTTCTGTAAAGGAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: FLCSKFGTTATLLVRLSMGEWIP*FCKGDC Trigger: GCAGTCTCCTTTACAGAAGCAGGGTATCCATTCCCC...CATGGAAAGTCGCACGAGGAGAGTGGCTGTTGTTCCAAATTTTGAGCAAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | CATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCACTTTCATTGAGAGGGGGCCTTTaGCAGGACTTCTCTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: HGSAPSCLLCFIFHCSLSLRGGL*QDFSWL Trigger: CAACCAAGAGAAGTCCTGGCAAAGGCCCCCTCTCAA...TGAAAGTGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | GTTCTCCATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCACTTCTGAGGCATTTCTaGGGGCTTCATTACTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: VLHGSAPSCLLCFIFHCSLLRHF*GLHYSD Trigger: GTCGGAGTAATGAAGCCCCCAGAAATGCCTCAGAAG...TGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTTTTTCCACTGGGCTTTaGGGCCTCCTGGCTGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LEINECQGISRHSKEGSVFSTGL*GLLAAK Trigger: CTTGGCAGCCAGGAGGCCCCAAAGCCCAGTGGAAAA...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTACTCGAGGTTCTCCATaGCTCGGCTCCATCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LEINECQGISRHSKEGSVTRGSP*LGSILP Trigger: AGGCAGGATGGAGCCGAGCCATGGAGAACCTCGAGT...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCTACCACTTTGTCCTCTaGGCAGTTAGACCCTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGYHFVL*AVRPFV Trigger: GACGAAGGGTCTAACTGCTCAGAGGACAAAGTGGTA...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | AACAGCCACTCTCCTCGTGCGACTTTCCATGACTCTCCACCTGGATTTAAGTTCTATTTGGCAAGGATTTaGTCAGCTAAAGAGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: NSHSPRATFHDSPPGFKFYLARI*SAKEHW Trigger: CCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATA...GAACTTAAATCCAGGTGGAGAGTCATGGAAAGTCGCACGAGGAGAGTGGCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | AACAGCCACTCTCCTCGTGCGACTTTCCATGACTCTCCACCTGGATTTAAGTTCTCTTGGTTGTTGATTTaGCATAGTTTCTGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: NSHSPRATFHDSPPGFKFSWLLI*HSFWLW Trigger: CCAGAGCCAGAAACTATGGCAAATCAACAACCAAGA...GAACTTAAATCCAGGTGGAGAGTCATGGAAAGTCGCACGAGGAGAGTGGCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCGGTTGTAATGAATGGTaGTCTTCCAGCCATCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGGCNEW*SSSHPE Trigger: CTCCGGATGGCTGGAAGAGCACCATTCATTACAACC...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | AGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCAATCCCAAAAGCGGCGGTaGCCCTCCTTAGTGAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SFLSSASKMDLDTLAYPQSQKRR*PSLVSF Trigger: GAAGCTCACTAAGGAGGGGCACCGCCGCTTTTGGGA...TTGAGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | AACAGCCACTCTCCTCGTGCGACTTTCCATGACTCTCCACCTGGATTTAAGTTCAAGAGCACTGGTCTGTaGTACAAGGCAGAAATAACT | + |
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Preference number: 4 (lower is better) Translates to: NSHSPRATFHDSPPGFKFKSTGL*YKAEIT Trigger: AGTTATTTCTGCCTTGTACCACAGACCAGTGCTCTT...GAACTTAAATCCAGGTGGAGAGTCATGGAAAGTCGCACGAGGAGAGTGGCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCTTCATTTCAGGGGACTaGAGGGAGTTGTCGTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGFISGD*RELSSG Trigger: ACCAGACGACAACTCCCTCCAGTCCCCTGAAATGAA...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | TTCCTTTGCTCAAAATTTGGAACAACAGCCACTCTCCTCGTGCGACTTTCCATGATTAGTGGTCAGACCTaGAGAAACCTCAGCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FLCSKFGTTATLLVRLSMISGQT*RNLSFL Trigger: CAGAAAGCTGAGGTTTCTCCAGGTCTGACCACTAAT...CATGGAAAGTCGCACGAGGAGAGTGGCTGTTGTTCCAAATTTTGAGCAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | TTCCTTTGCTCAAAATTTGGAACAACAGCCACTCTCCTCGTGCGACTTTCCATGCTCCGACTCTGTATTTaGCAAGGATTTGCTCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: FLCSKFGTTATLLVRLSMLRLCI*QGFAQL Trigger: TAGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAG...CATGGAAAGTCGCACGAGGAGAGTGGCTGTTGTTCCAAATTTTGAGCAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | GTTCTCCATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCAGTGGAGAGAGACTTCTaGAAGAACAGATATCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: VLHGSAPSCLLCFIFHCSVERDF*KNRYLA Trigger: TGCTAGATATCTGTTCTTTCAGAAGTCTCTCTCCAC...TGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | AACAGCCACTCTCCTCGTGCGACTTTCCATGACTCTCCACCTGGATTTAAGTTCTGTAGTGTTTGTTGTTaGTGCTGGCTTGTTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: NSHSPRATFHDSPPGFKFCSVCC*CWLVSF Trigger: AAAAGAAACAAGCCAGCAGCAACAACAAACACTACA...GAACTTAAATCCAGGTGGAGAGTCATGGAAAGTCGCACGAGGAGAGTGGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | GTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTATTCTTCAAAACTAGCTCAACCCACATCCACAGATTaGGTTCACAGGGAGGACCAT | + |
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Preference number: 4 (lower is better) Translates to: VSVMPLLQFAIYSSKLAQPTSTD*VHREDH Trigger: ATGGTCCTCCCTGTGAACCCAATCTGTGGATGTGGG...TTGAGCTAGTTTTGAAGAATAAATGGCAAACTGGAGTAGAGGCATTACAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | AGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCAAGCTAGGGCAATAAGGTaGCTACAATTGAGAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SFLSSASKMDLDTLAYPQARAIR*LQLRGG Trigger: GCCCCCTCTCAATTGTAGCCACCTTATTGCCCTAGC...TTGAGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCCAAATTCTCTTCACATaGCACTCGAGGTTCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGQILFT*HSRFSM Trigger: CATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTG...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTAGGAAATGCTGTCGGGTaGAATTGTAGATCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLGNAVG*NCRSPA Trigger: TGCAGGAGATCTACAATTTCACCCGACAGCATTTCC...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTTGGATTCTCTCCCTTTaGGCAAAGGCTAAGACACGA | + |
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Preference number: 4 (lower is better) Translates to: LSFLSSASKMDLDTLAYPWILSL*AKAKTR Trigger: TCGTGTCTTAGCCTTTGCTCAAAGGGAGAGAATCCA...AGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTAGTCAACAACTCTGGCTaGCTCATGCACTCTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLVNNSG*LMHSWI Trigger: AATCCAAGAGTGCATGAGTCAGCCAGAGTTGTTGAC...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | GTTCTCCATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCAGTAGAAGGGGAAACTTaGTTCTTCATCACAAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: VLHGSAPSCLLCFIFHCSVEGET*FFITSQ Trigger: TTGACTTGTGATGAAGAATCAAGTTTCCCCTTCTAC...TGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCTTAGCAAAACTCCACTaGTGTCTCTTGGCTCCTAAA | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGLAKLH*CLLAPK Trigger: TTTAGGAGCCAAGAGACATCAGTGGAGTTTTGCTAA...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTTTCTGTAAAGGAGACTaGTCACTGGAGGAAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LEINECQGISRHSKEGSVFCKGD*SLEEDG Trigger: GCCATCTTCCTCCAGTGAGCAGTCTCCTTTACAGAA...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | AGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCAAACTCTGGCTGACTCATaGACTCTTGGATTCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SFLSSASKMDLDTLAYPQTLADS*TLGFSP Trigger: GGGAGAGAATCCAAGAGTGCATGAGTCAGCCAGAGT...TTGAGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTACCTGGGACCTGGCCATaGAGACTATACCAAAATTCA | + |
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Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLPGTWP*RLYQNS Trigger: TGAATTTTGGTATAGTCTCCATGGCCAGGTCCCAGG...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTATCAGCTAAAGAGCACTaGTCTGTGGTACAAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLSAKEH*SVVQGR Trigger: TCTGCCTTGTACCACAGACCAGTGCTCTTTAGCTGA...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTACTCACTGGAGGAAGATaGCAGAGACTCTACCACTTT | + |
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Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLLTGGR*QRLYHF Trigger: AAAGTGGTAGAGTCTCTGCCATCTTCCTCCAGTGAG...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | CTCAGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTACACTGAGGCCACAGTaGGGGTTGTTTCTTAATGCT | + |
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Preference number: 4 (lower is better) Translates to: LSFLSSASKMDLDTLAYPTLRPQ*GLFLNA Trigger: AGCATTAAGAAACAACCCCCACTGTGGCCTCAGTGT...AGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTAATCCTTAAGGCTGTCTaGCACCTTCTCAAAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLILKAV*HLLKAV Trigger: GACAGCTTTGAGAAGGTGCCAGACAGCCTTAAGGAT...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | ATTCTTCATCACAAGTCAAATTCTCTTCACATGGCACTCGAGGTTCTCCATGGCTTTAGGTGGAATTCTTaGGCTTTGATTGGAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ILHHKSNSLHMALEVLHGFRWNS*ALIGSR Trigger: TCTGCTTCCAATCAAAGCTCAAGAATTCCACCTAAA...GCCATGGAGAACCTCGAGTGCCATGTGAAGAGAATTTGACTTGTGATGAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | TTCCTTTGCTCAAAATTTGGAACAACAGCCACTCTCCTCGTGCGACTTTCCATGTTCTTGAGCTTTGATTaGAAGCAGAAAGTCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLCSKFGTTATLLVRLSMFLSFD*KQKVTS Trigger: TGAAGTGACTTTCTGCTTCCAATCAAAGCTCAAGAA...CATGGAAAGTCGCACGAGGAGAGTGGCTGTTGTTCCAAATTTTGAGCAAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTAAGTCACTGGGGGAATaGATACCCTGCTTCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEINECQGISRHSKEGSVKSLGE*IPCFCK Trigger: TTTACAGAAGCAGGGTATCCATTCCCCCAGTGACTT...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTAGGAATTCTTGAGCTTTaGTTGGAAGCAGAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLGILEL*LEAESH Trigger: GTGACTTTCTGCTTCCAATCAAAGCTCAAGAATTCC...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | CTCAGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTGCAAGAGCGAGGTCTTaGATTATCTTCATCCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSFLSSASKMDLDTLAYPARARS*IIFILK Trigger: CTTAAGGATGAAGATAATGCAAGACCTCGCTCTTGC...AGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | GTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTATTCTTCAAAACTAGCTCAAGGCTCGGCTCCATCCTaGCTTTTATGCTTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVMPLLQFAIYSSKLAQGSAPS*LLCFIF Trigger: GAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCC...TTGAGCTAGTTTTGAAGAATAAATGGCAAACTGGAGTAGAGGCATTACAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CCA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTTACTGGAGAGATAGGTaGAGAGAGACTTCTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEINECQGISRHSKEGSVYWRDR*RETSER Trigger: TCTTTCAGAAGTCTCTCTCCACCTATCTCTCCAGTA...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | AGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCAAACTTCTCTTGGTTGTTaGTTTGCCATAGTTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSSASKMDLDTLAYPQTSLGC*FAIVSG Trigger: GCCAGAAACTATGGCAAATCAACAACCAAGAGAAGT...TTGAGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTAGAAAAGTGAGGTTCTaGAGGATAAAATGGGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: LEINECQGISRHSKEGSVRKVRF*RIKWVT Trigger: AGTAACCCATTTTATCCTTCAGAACCTCACTTTTCT...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR TCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTATTGGTCTTTGCCTTATaGTACAGAAGTAGCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLLVFAL*YRSSIY Trigger: GTAAATGCTACTTCTGTATCATAAGGCAAAGACCAA...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTACCATCCTGCCTTTTATaGTTTATATTCCACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLCSHCCLCNASTPVCHLPSCLL*FIFHCS Trigger: TGAACAGTGGAATATAAAGCATAAAAGGCAGGATGG...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR GCA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTGCCTCTACTCCAGTTTaGCATTTATTCTTCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LEINECQGISRHSKEGSVASTPV*HLFFKT Trigger: AGTTTTGAAGAATAAATGGCAAACTGGAGTAGAGGC...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 90 bp | TGCCAAGGGGGCACAGGATATTGGGGTCCACCCACATCCACAGATTaGGTTCACAGGGAGGACCATCTCCATCAGGACTGGGTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQGGTGYWGPPTSTD*VHREDHLHQDWVSS Trigger: AGAGGAGACCCAGTCCTGATGGAGATGGTCCTCCCTGTGAACCCAATCTGTGGATGTGGGTGGACCCCAATATCCTGTGCCCCCTTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS TCA 90 bp | GGTTCACAGGGAGGACCATCTCCATCAGGACTGGGTCTCCTCTTCTaGGGCATTTCTGGGGGCTTCATTACTCCGACTCTGTATTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSQGGPSPSGLGLLF*GISGGFITPTLYLA Trigger: TGCCAAATACAGAGTCGGAGTAATGAAGCCCCCAGAAATGCCTCAGAAGAGGAGACCCAGTCCTGATGGAGATGGTCCTCCCTGTGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS TCA 90 bp | CTGCTCACTGGAGGAAGATGGCAGAGACTCTACCACTTTGTCCTCTaGGCAGTTAGACCCTTCGTCTTTTTGTGGGGGCTGAGGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTGGRWQRLYHFVL*AVRPFVFLWGLRER Trigger: CCTTTCCCTCAGCCCCCACAAAAAGACGAAGGGTCTAACTGCTCAGAGGACAAAGTGGTAGAGTCTCTGCCATCTTCCTCCAGTGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 90 bp | CACTGGGGGAATGGATACCCTGCTTCTGTAAAGGAGACTGCTCACTaGAGGAAGATGGCAGAGACTCTACCACTTTGTCCTCTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: HWGNGYPASVKETAH*RKMAETLPLCPLSS Trigger: ACTGCTCAGAGGACAAAGTGGTAGAGTCTCTGCCATCTTCCTCCAGTGAGCAGTCTCCTTTACAGAAGCAGGGTATCCATTCCCCCAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 90 bp | GGTTCCTCAGCCTCCTCTTCTGTGAGCTCAAAGTCACTGGGGGAATaGATACCCTGCTTCTGTAAAGGAGACTGCTCACTGGAGGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSSASSSVSSKSLGE*IPCFCKGDCSLEED Trigger: ATCTTCCTCCAGTGAGCAGTCTCCTTTACAGAAGCAGGGTATCCATTCCCCCAGTGACTTTGAGCTCACAGAAGAGGAGGCTGAGGAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS GCA 90 bp | TCAAAGTCACTGGGGGAATGGATACCCTGCTTCTGTAAAGGAGACTaGTCACTGGAGGAAGATGGCAGAGACTCTACCACTTTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKSLGEWIPCFCKGD*SLEEDGRDSTTLSS Trigger: AGAGGACAAAGTGGTAGAGTCTCTGCCATCTTCCTCCAGTGAGCAGTCTCCTTTACAGAAGCAGGGTATCCATTCCCCCAGTGACTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTGGGGACTGGAGGGAGTaGTCGTCTGGTTCCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LEINECQGISRHSKEGSVGDWRE*SSGSSA Trigger: GGCTGAGGAACCAGACGACAACTCCCTCCAGTCCCC...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTAGGGGGCACAGGATATaGGGGTCCACCCACATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LEINECQGISRHSKEGSVRGHRI*GSTHIH Trigger: GTGGATGTGGGTGGACCCCAATATCCTGTGCCCCCT...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | AACAGCCACTCTCCTCGTGCGACTTTCCATGACTCTCCACCTGGATTTAAGTTCAGAGACTCTACCACTTaGTCCTCTGAGCAGTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSHSPRATFHDSPPGFKFRDSTT*SSEQLD Trigger: GTCTAACTGCTCAGAGGACAAAGTGGTAGAGTCTCT...GAACTTAAATCCAGGTGGAGAGTCATGGAAAGTCGCACGAGGAGAGTGGCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 90 bp | TCTTCTGAGGCATTTCTGGGGGCTTCATTACTCCGACTCTGTATTTaGCAAGGATTTGCTCAGCTAAAGAGCACTGGTCTGTGGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEAFLGASLLRLCI*QGFAQLKSTGLWYK Trigger: CTTGTACCACAGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAGTAATGAAGCCCCCAGAAATGCCTCAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | GTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTATTCTTCAAAACTAGCTCAACTTTTCCACTGGGCTTaGGGGCCTCCTGGCTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSVMPLLQFAIYSSKLAQLFHWA*GPPGCQ Trigger: TTGGCAGCCAGGAGGCCCCAAAGCCCAGTGGAAAAG...TTGAGCTAGTTTTGAAGAATAAATGGCAAACTGGAGTAGAGGCATTACAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 90 bp | ACTCCGACTCTGTATTTGGCAAGGATTTGCTCAGCTAAAGAGCACTaGTCTGTGGTACAAGGCAGAAATAACTCATTCCTCATGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TPTLYLARICSAKEH*SVVQGRNNSFLMSQ Trigger: CTGGGACATGAGGAATGAGTTATTTCTGCCTTGTACCACAGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTACCCACATCCACAGATaGGGTTCACAGGGAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LEINECQGISRHSKEGSVTHIHR*GSQGGP Trigger: TGGTCCTCCCTGTGAACCCAATCTGTGGATGTGGGT...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS GCA 90 bp | ATTTCTGGGGGCTTCATTACTCCGACTCTGTATTTGGCAAGGATTTaGTCAGCTAAAGAGCACTGGTCTGTGGTACAAGGCAGAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISGGFITPTLYLARI*SAKEHWSVVQGRNN Trigger: GTTATTTCTGCCTTGTACCACAGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAGTAATGAAGCCCCCAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 90 bp | ACTGAAGAAAGAGGCACCAATGTCTCACTGATTAGTGGTCAGACCTaGAGAAACCTCAGCTTTCTGGAACAAGGCTCAAAACATGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TEERGTNVSLISGQT*RNLSFLEQGSKHGS Trigger: ACTTCCATGTTTTGAGCCTTGTTCCAGAAAGCTGAGGTTTCTCCAGGTCTGACCACTAATCAGTGAGACATTGGTGCCTCTTTCTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | CTCAGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTATTGAGAGGGGGCCTTaGCCAGGACTTCTCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSFLSSASKMDLDTLAYPIERGP*PGLLLV Trigger: AACCAAGAGAAGTCCTGGCAAAGGCCCCCTCTCAAT...AGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | CTCAGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTATAAGGTGGCTACAATaGAGAGGGGGCCTTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSFLSSASKMDLDTLAYPIRWLQ*RGGLCQ Trigger: CTGGCAAAGGCCCCCTCTCAATTGTAGCCACCTTAT...AGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | GTTCTCCATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCAAGCTTACAGGCGTTTTaGTACCCCCATTATGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VLHGSAPSCLLCFIFHCSSLQAF*YPHYEG Trigger: ACCTTCATAATGGGGGTACAAAAACGCCTGTAAGCT...TGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | GTTCTCCATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCACAGGACTTCTCTTGGTaGTTGATTTGCCATAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLHGSAPSCLLCFIFHCSQDFSW*LICHSF Trigger: GAAACTATGGCAAATCAACAACCAAGAGAAGTCCTG...TGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATGGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | CATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCACTTTCATCCTTTGCTCAAAATTaGGAACAACAGCCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HGSAPSCLLCFIFHCSLSSFAQN*EQQPLS Trigger: GGAGAGTGGCTGTTGTTCCAAATTTTGAGCAAAGGA...TGAAAGTGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTACTCCGACTCTGTATTaGGCAAGGATTTGCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LEINECQGISRHSKEGSVTPTLY*ARICSA Trigger: AGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAGT...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | GTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTATTCTTCAAAACTAGCTCAACTGACTCATGCACTCTaGGATTCTCTCCCTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSVMPLLQFAIYSSKLAQLTHAL*DSLPLS Trigger: GCTCAAAGGGAGAGAATCCAAGAGTGCATGAGTCAG...TTGAGCTAGTTTTGAAGAATAAATGGCAAACTGGAGTAGAGGCATTACAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | CATGGCTCGGCTCCATCCTGCCTTTTATGCTTTATATTCCACTGTTCACTTTCAGGTAGAAGGGGAAACTaGATTCTTCATCACAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HGSAPSCLLCFIFHCSLSGRRGN*ILHHKS Trigger: TGACTTGTGATGAAGAATCAAGTTTCCCCTTCTACC...TGAAAGTGAACAGTGGAATATAAAGCATAAAAGGCAGGATGGAGCCGAGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | AGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCAAGGAAAGGAGAAATGTTaGTCAGATCCTCTTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SFLSSASKMDLDTLAYPQGKEKC*SDPLFH Trigger: GTGGAAAAGAGGATCTGACAAACATTTCTCCTTTCC...TTGAGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | AGCTTTTTATCCTCAGCATCTAAGATGGACCTTGACACATTAGCATATCCTCAAGACTTCTCTTGGTTGTaGATTTGCCATAGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFLSSASKMDLDTLAYPQDFSWL*ICHSFW Trigger: CCAGAAACTATGGCAAATCAACAACCAAGAGAAGTC...TTGAGGATATGCTAATGTGTCAAGGTCCATCTTAGATGCTGAGGATAAAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | TTAGAGATTAATGAATGTCAGGGGATAAGTAGGCACAGTAAGGAAGGCAGTGTTTGCCTCTACTCCAGTTaGCCATTTATTCTTCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LEINECQGISRHSKEGSVCLYSS*PFILQN Trigger: GTTTTGAAGAATAAATGGCAAACTGGAGTAGAGGCA...AACACTGCCTTCCTTACTGTGCCTACTTATCCCCTGACATTCATTAATCTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS-3UTR CAA 90 bp | CCACTTTGTTCACATTGTTGTCTCTGTAATGCCTCTACTCCAGTTTGCCATTTACTGTTAACTTGGTCTTaGCCTTATGATACAGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLCSHCCLCNASTPVCHLLLTWS*PYDTEV Trigger: TACTTCTGTATCATAAGGCAAAGACCAAGTTAACAG...TAAATGGCAAACTGGAGTAGAGGCATTACAGAGACAACAATGTGAACAAAGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | TTGGGGCCTCCTGGCTGCCAAGGGGGCACAGGATATTaGGGTCCACCCACATCCACAGATTGGGTTCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGPPGCQGGTGY*GPPTSTDWVHR Trigger: CCTGTGAACCCAATCTGTGGATGTGGGTGGACCCCAATATCCTGTGCCCCCTTGGCAGCCAGGAGGCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CAA 90 bp | CTGCCAAGGGGGCACAGGATATTGGGGTCCACCCACATCCACAGATaGGGTTCACAGGGAGGACCATCTCCATCAGGACTGGGTCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPRGHRILGSTHIHR*GSQGGPSPSGLGLL Trigger: GAGGAGACCCAGTCCTGATGGAGATGGTCCTCCCTGTGAACCCAATCTGTGGATGTGGGTGGACCCCAATATCCTGTGCCCCCTTGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | GGCACAGGATATTGGGGTCCACCCACATCCACAGATTaGGTTCACAGGGAGGACCATCTCCATCAGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGYWGPPTSTD*VHREDHLHQDW Trigger: CCAGTCCTGATGGAGATGGTCCTCCCTGTGAACCCAATCTGTGGATGTGGGTGGACCCCAATATCCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CAA 72 bp | GGGCACAGGATATTGGGGTCCACCCACATCCACAGATaGGGTTCACAGGGAGGACCATCTCCATCAGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: GHRILGSTHIHR*GSQGGPSPSGL Trigger: CAGTCCTGATGGAGATGGTCCTCCCTGTGAACCCAATCTGTGGATGTGGGTGGACCCCAATATCCTGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000339140.5 |
||
| CDS TCA 72 bp | GGAGGAAGATGGCAGAGACTCTACCACTTTGTCCTCTaGGCAGTTAGACCCTTCGTCTTTTTGTGGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGRWQRLYHFVL*AVRPFVFLWGL Trigger: CAGCCCCCACAAAAAGACGAAGGGTCTAACTGCTCAGAGGACAAAGTGGTAGAGTCTCTGCCATCTTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | AGAAATGTTTGTCAGATCCTCTTTTCCACTGGGCTTTaGGGCCTCCTGGCTGCCAAGGGGGCACAGGATATT | + |
|
Preference number: 6 (lower is better) Translates to: RNVCQILFSTGL*GLLAAKGAQDI Trigger: AATATCCTGTGCCCCCTTGGCAGCCAGGAGGCCCCAAAGCCCAGTGGAAAAGAGGATCTGACAAACATTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS GCA 72 bp | CAAAGCTGTCCAGGAAGCAGAGGTTGTAATGAATGGTaGTCTTCCAGCCATCCGGAGCTGTCCAGAAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QSCPGSRGCNEW*SSSHPELSRKR Trigger: CCTTTTTCTGGACAGCTCCGGATGGCTGGAAGAGCACCATTCATTACAACCTCTGCTTCCTGGACAGCTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
||
| CDS GCA 72 bp | GGCTTCATTACTCCGACTCTGTATTTGGCAAGGATTTaGTCAGCTAAAGAGCACTGGTCTGTGGTACAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GFITPTLYLARI*SAKEHWSVVQG Trigger: GCCTTGTACCACAGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAGTAATGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS GCA 72 bp | CTCCTTAGTGAGCTTCCAAAGGCAAGAGCGAGGTCTTaGATTATCTTCATCCTTAAGGCTGTCTGGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLSELPKARARS*IIFILKAVWHL Trigger: AAGGTGCCAGACAGCCTTAAGGATGAAGATAATGCAAGACCTCGCTCTTGCCTTTGGAAGCTCACTAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | GCATTTCTGGGGGCTTCATTACTCCGACTCTGTATTTaGCAAGGATTTGCTCAGCTAAAGAGCACTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: AFLGASLLRLCI*QGFAQLKSTGL Trigger: CAGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAGTAATGAAGCCCCCAGAAATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | AATGGATACCCTGCTTCTGTAAAGGAGACTGCTCACTaGAGGAAGATGGCAGAGACTCTACCACTTTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: NGYPASVKETAH*RKMAETLPLCP Trigger: AGGACAAAGTGGTAGAGTCTCTGCCATCTTCCTCCAGTGAGCAGTCTCCTTTACAGAAGCAGGGTATCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CAA 72 bp | GGCATTTCTGGGGGCTTCATTACTCCGACTCTGTATTaGGCAAGGATTTGCTCAGCTAAAGAGCACTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GISGGFITPTLY*ARICSAKEHWS Trigger: AGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATACAGAGTCGGAGTAATGAAGCCCCCAGAAATGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CAA 72 bp | TGCTCACTGGAGGAAGATGGCAGAGACTCTACCACTTaGTCCTCTGAGCAGTTAGACCCTTCGTCTTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CSLEEDGRDSTT*SSEQLDPSSFC Trigger: ACAAAAAGACGAAGGGTCTAACTGCTCAGAGGACAAAGTGGTAGAGTCTCTGCCATCTTCCTCCAGTGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | AGAGGCACCAATGTCTCACTGATTAGTGGTCAGACCTaGAGAAACCTCAGCTTTCTGGAACAAGGCTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: RGTNVSLISGQT*RNLSFLEQGSK Trigger: TTTTGAGCCTTGTTCCAGAAAGCTGAGGTTTCTCCAGGTCTGACCACTAATCAGTGAGACATTGGTGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | TGGCAAGGATTTGCTCAGCTAAAGAGCACTGGTCTGTaGTACAAGGCAGAAATAACTCATTCCTCATGTCCC | + |
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Preference number: 6 (lower is better) Translates to: WQGFAQLKSTGL*YKAEITHSSCP Trigger: GGGACATGAGGAATGAGTTATTTCTGCCTTGTACCACAGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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| CDS CCA 72 bp | CTGTATTTGGCAAGGATTTGCTCAGCTAAAGAGCACTaGTCTGTGGTACAAGGCAGAAATAACTCATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LYLARICSAKEH*SVVQGRNNSFL Trigger: GAGGAATGAGTTATTTCTGCCTTGTACCACAGACCAGTGCTCTTTAGCTGAGCAAATCCTTGCCAAATACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000339140.5 |
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