Pregenerated sensors for FOXR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176302Ensembl transcript IDs: ENST00000317011.8, ENST00000531539.5, ENST00000533282.1, ENST00000626640.4, ENST00000634385.1, ENST00000634955.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTTGGGAGCGCGGCGGCTaGGGAGCGACCCTCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: PPRSTSRGKIEAVCWPRPWERGG*GATLTG Trigger: GCCTGTGAGGGTCGCTCCTCAGCCGCCGCGCTCCCA...AGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCAGCAGTCCCGGGACCTaGCCATGGAGGCGGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPSSPGT*PWRRAQ Trigger: CTGGGCCCGCCTCCATGGCCAGGTCCCGGGACTGCT...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTTGGGAGCGCGGCGGCTaGGGAGCGACCCTCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GQLPEARSRPCAGPALHAWERGG*GATLTG Trigger: GCCTGTGAGGGTCGCTCCTCAGCCGCCGCGCTCCCA...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGCCTCCCCGCCTGGCTaGTGGCTTGCCGAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACASPPG*WLAEAS Trigger: GGAGGCTTCGGCAAGCCAGCAGCCAGGCGGGGAGGC...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCCTCCCCGCCTGGCTaGTGGCTTGCCGAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PPRSTSRGKIEAVCWPRPASPPG*WLAEAS Trigger: GGAGGCTTCGGCAAGCCAGCAGCCAGGCGGGGAGGC...AGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCAGCAGTCCCGGGACCTaGCCATGGAGGCGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACSSPGT*PWRRAQ Trigger: CTGGGCCCGCCTCCATGGCCAGGTCCCGGGACTGCT...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCAAGATCGAGGCCGTGTaGTGGCCCCGCCCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPKIEAV*WPRPAC Trigger: GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTT...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTCCCCGCCTGGCTGCTaGCTTGCCGAAGCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTSPPGC*LAEASD Trigger: GTCGGAGGCTTCGGCAAGCCAGCAGCCAGGCGGGGA...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCAGAGCCTCCCCGCCTaGCTGCTGGCTTGCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPEARSRPCAGPALHADRQSLPA*LLACRS Trigger: GCTTCGGCAAGCCAGCAGCCAGGCGGGGAGGCTCTG...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCACACCCCTGCGGCCTCTaGGCAGCTGGCATCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRSTSRGKIEAVCWPRPAHPCGL*AAGIFL Trigger: GAGGAAGATGCCAGCTGCTCAGAGGCCGCAGGGGTG...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGGAGGACTGGGACAGTaGTTCCACCCCTGCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACGGLGQ*FHPCGL Trigger: GAGGCCGCAGGGGTGGAATCACTGTCCCAGTCCTCC...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCGCCGGCTCGGATTaGGTTAGCTTGGCGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPCAGSD*VSLAAA Trigger: AGCTGCCGCCAAGCTAACTCAATCCGAGCCGGCGCA...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCGAGGGGGAGACCGCTTaGTGGAGGACTGGGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPEGETA*WRTGTV Trigger: CACTGTCCCAGTCCTCCAGCAAGCGGTCTCCCCCTC...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTGCCTGGCTGCTGGCTTaGCGAAGCCTCCGACTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTAWLLA*RSLRLW Trigger: CCAGAGTCGGAGGCTTCGGCAAGCCAGCAGCCAGGC...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCAAGATCGAGGCCGTGTaGTGGCCCCGCCCTGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACKIEAV*WPRPAC Trigger: GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTT...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTTCCCCGCCTGGCTGCTaGCTTGCCGAAGCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQLPEARSRPCAGPALHASPPGC*LAEASD Trigger: GTCGGAGGCTTCGGCAAGCCAGCAGCCAGGCGGGGA...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | GAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTTCAGAGCCTCCCCGCCTaGCTGCTGGCTTGCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EARSRPCAGPALHADRHFQSLPA*LLACRS Trigger: GCTTCGGCAAGCCAGCAGCCAGGCGGGGAGGCTCTG...AAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTTCACCCCTGCGGCCTCTaGGCAGCTGGCATCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EARSRPCAGPALHADRHFHPCGL*AAGIFL Trigger: GAGGAAGATGCCAGCTGCTCAGAGGCCGCAGGGGTG...AAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTTGGAGGACTGGGACAGTaGTTCCACCCCTGCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EARSRPCAGPALHADRHFGGLGQ*FHPCGL Trigger: GAGGCCGCAGGGGTGGAATCACTGTCCCAGTCCTCC...AAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGCCGGCTCGGATTaGGTTAGCTTGGCGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRSTSRGKIEAVCWPRPACAGSD*VSLAAA Trigger: AGCTGCCGCCAAGCTAACTCAATCCGAGCCGGCGCA...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGAGGGGGAGACCGCTTaGTGGAGGACTGGGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACEGETA*WRTGTV Trigger: CACTGTCCCAGTCCTCCAGCAAGCGGTCTCCCCCTC...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGTGCTGGCCCCGCCCTaGATGCTGACAGGCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACVLAPP*MLTGTF Trigger: GAAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCAC...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCAGTGCTGGCCCCGCCCTaGATGCTGACAGGCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: PRSTSRGKIEAVCWPRPAVLAPP*MLTGTF Trigger: GAAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCAC...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCCCCGCCCTGCATGCTaGCAGGCACTTTCTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LPEARSRPCAGPALHADRPRPAC*QALSQS Trigger: GCTTTGAGAAAGTGCCTGTCAGCATGCAGGGCGGGG...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTCCCCGCCCTGCATGCTaGCAGGCACTTTCTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTPRPAC*QALSQS Trigger: GCTTTGAGAAAGTGCCTGTCAGCATGCAGGGCGGGG...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTTCCTCCTTCTGGGGTaGCTGAGAGGAGGGGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPFLLLG*LRGGEC Trigger: ACACTCCCCTCCTCTCAGCCACCCCAGAAGGAGGAA...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCCCTCTTCCTACGTCCTaGGACCTCCAGCTTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACPLPTS*DLQLSR Trigger: CCTGGAAAGCTGGAGGTCTCAGGACGTAGGAAGAGG...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTTAGGTGGAAGTAATTaGGAGGGGGCCGGGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPLGGSN*EGAGTR Trigger: TCTGGTCCCGGCCCCCTCTCAATTACTTCCACCTAA...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCGCACTTTCTCAAAGCTaGACCCTCCCTCCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPALSQS*TLPPSE Trigger: CTCAGAGGGAGGGAGGGTTCAGCTTTGAGAAAGTGC...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGAGAGGAGGGGAGTGTaGTTGTCAGGTCCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACERRGV*LSGPPS Trigger: AGAGGGAGGACCTGACAAGCACACTCCCCTCCTCTC...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR GCA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGGAGAGGAGGGGAGTGTaGTTGTCAGGTCCTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPEARSRPCAGPALHADRERRGV*LSGPPS Trigger: AGAGGGAGGACCTGACAAGCACACTCCCCTCCTCTC...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCACGCTTGCTGGAGGACTaGGACAGTGATTCCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: PRSTSRGKIEAVCWPRPARLLED*DSDSTP Trigger: AGGGGTGGAATCACTGTCCCAGTCCTCCAGCAAGCG...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCGCTTGCTGGAGGACTaGGACAGTGATTCCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPEARSRPCAGPALHADRRLLED*DSDSTP Trigger: AGGGGTGGAATCACTGTCCCAGTCCTCCAGCAAGCG...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTGGGGAGACCGCTTGCTaGAGGACTGGGACAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTGETAC*RTGTVI Trigger: AATCACTGTCCCAGTCCTCCAGCAAGCGGTCTCCCC...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGGAGGTGAGATGTGGTaGAGGCCAGAAAGAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: RSTSRGKIEAVCWPRPACGGEMW*RPERAR Trigger: ACGAGCTCTTTCTGGCCTTCACCACATCTCACCTCC...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTTTCCGCTAAGGGGAGGTaGGATGTGGTGAAGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: EARSRPCAGPALHADRHFSAKGR*DVVKAR Trigger: TCTGGCCTTCACCACATCTCACCTCCCCTTAGCGGA...AAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGTTAGGTGGAAGTAATTaGGAGGGGGCCGGGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: LPEARSRPCAGPALHADRLGGSN*EGAGTR Trigger: TCTGGTCCCGGCCCCCTCTCAATTACTTCCACCTAA...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTGCACTTTCTCAAAGCTaGACCCTCCCTCCCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTALSQS*TLPPSE Trigger: CTCAGAGGGAGGGAGGGTTCAGCTTTGAGAAAGTGC...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCCAGAAGTCGAGGTGTTaGAGCTTCACGTCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPQKSRC*SFTSTF Trigger: GAAGGTGGACGTGAAGCTCCAACACCTCGACTTCTG...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTTTCCTCCTTCTGGGGTaGCTGAGAGGAGGGGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GQLPEARSRPCAGPALHAFLLLG*LRGGEC Trigger: ACACTCCCCTCCTCTCAGCCACCCCAGAAGGAGGAA...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGGGGAGACCGCTTGCTaGAGGACTGGGACAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: GQLPEARSRPCAGPALHAGETAC*RTGTVI Trigger: AATCACTGTCCCAGTCCTCCAGCAAGCGGTCTCCCC...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTCGGATTGAGTTAGCTTaGCGGCAGCTCAGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTRIELA*RQLRCG Trigger: TCCACACCTGAGCTGCCGCCAAGCTAACTCAATCCG...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR CCA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCGGATTGAGTTAGCTTaGCGGCAGCTCAGGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LPEARSRPCAGPALHADRRIELA*RQLRCG Trigger: TCCACACCTGAGCTGCCGCCAAGCTAACTCAATCCG...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGGAGGTGAGATGTGGTaGAGGCCAGAAAGAGCTCGT | + |
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Preference number: 4 (lower is better) Translates to: GQLPEARSRPCAGPALHAGGEMW*RPERAR Trigger: ACGAGCTCTTTCTGGCCTTCACCACATCTCACCTCC...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTAGATCTGTTGCACGTTaGGGCCACAGGGGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQLPEARSRPCAGPALHARSVAR*GHRGNC Trigger: ACAGTTCCCCCTGTGGCCTCAACGTGCAACAGATCT...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | GAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTTAGATCTGTTGCACGTTaGGGCCACAGGGGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EARSRPCAGPALHADRHFRSVAR*GHRGNC Trigger: ACAGTTCCCCCTGTGGCCTCAACGTGCAACAGATCT...AAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR TCA 90 bp | CCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCTTGGACCACAGCATaGACAAAGCAGAATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPRSTSRGKIEAVCWPRPAWTTA*TKQNQA Trigger: GGCCTGATTCTGCTTTGTTCATGCTGTGGTCCAAGC...AGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS-3UTR TCA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGGCTTGGACCACAGCATaGACAAAGCAGAATCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPEARSRPCAGPALHADRAWTTA*TKQNQA Trigger: GGCCTGATTCTGCTTTGTTCATGCTGTGGTCCAAGC...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCCCCACATCCAGAGGTTaGGCTCATAATCTGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPPTSRG*AHNLDH Trigger: ATGGTCCAGATTATGAGCCCAACCTCTGGATGTGGG...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR TCA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCACCAAGCAGCTCCGAGTaGAACTGTAGATCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRSTSRGKIEAVCWPRPAPSSSE*NCRSVA Trigger: TGCAACAGATCTACAGTTTCACTCGGAGCTGCTTGG...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR TCA 90 bp | GAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTTCCAAGCAGCTCCGAGTaGAACTGTAGATCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EARSRPCAGPALHADRHFPSSSE*NCRSVA Trigger: TGCAACAGATCTACAGTTTCACTCGGAGCTGCTTGG...AAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR GCA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCGCATTAGCTGGCTGTTaGTTCTTGGGGTTAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPALAGC*FLGLKI Trigger: GATCTTTAACCCCAAGAAGCAACAGCCAGCTAATGC...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CCA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGGCTCATGCACTGTTaGATACTTTCTAGCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSTSRGKIEAVCWPRPAWLMHC*ILSSRV Trigger: CACTCGGCTAGAAAGTATCCAACAGTGCATGAGCCA...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTGCATTAGCTGGCTGTTaGTTCTTGGGGTTAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTALAGC*FLGLKI Trigger: GATCTTTAACCCCAAGAAGCAACAGCCAGCTAATGC...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CCA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCAGGGGATACACAATGTTaGGATTTACCCACATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSTSRGKIEAVCWPRPAGDTQC*DLPTSR Trigger: TCTGGATGTGGGTAAATCCCAACATTGTGTATCCCC...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CCA 90 bp | GAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTTTTGGCTCATGCACTGTTaGATACTTTCTAGCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EARSRPCAGPALHADRHFWLMHC*ILSSRV Trigger: CACTCGGCTAGAAAGTATCCAACAGTGCATGAGCCA...AAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS CCA 90 bp | CTTCACGTCCACCTTCGGGGCTGGCAGAGGCGCGGCGGCGCGGAGTaGGGACGCGGAGTGGGAGCGCGGCGGCTGAGGAGCGACCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHVHLRGWQRRGGAE*GRGVGARRLRSDPH Trigger: GTGAGGGTCGCTCCTCAGCCGCCGCGCTCCCACTCCGCGTCCCCACTCCGCGCCGCCGCGCCTCTGCCAGCCCCGAAGGTGGACGTGAAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
||
| CDS CCA 90 bp | GGCCCAGAAGTCGAGGTGTTGGAGCTTCACGTCCACCTTCGGGGCTaGCAGAGGCGCGGCGGCGCGGAGTGGGGACGCGGAGTGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GPEVEVLELHVHLRG*QRRGGAEWGRGVGA Trigger: CGCTCCCACTCCGCGTCCCCACTCCGCGCCGCCGCGCCTCTGCCAGCCCCGAAGGTGGACGTGAAGCTCCAACACCTCGACTTCTGGGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
||
| CDS CCA 90 bp | AGTCCCGGGACCTGGCCATGGAGGCGGGCCCAGAAGTCGAGGTGTTaGAGCTTCACGTCCACCTTCGGGGCTGGCAGAGGCGCGGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPGTWPWRRAQKSRC*SFTSTFGAGRGAAA Trigger: CGCCGCCGCGCCTCTGCCAGCCCCGAAGGTGGACGTGAAGCTCCAACACCTCGACTTCTGGGCCCGCCTCCATGGCCAGGTCCCGGGACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCGCCTGGCTGCTGGCTaGCCGAAGCCTCCGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPEARSRPCAGPALHADRRLAAG*PKPPTL Trigger: CAGAGTCGGAGGCTTCGGCAAGCCAGCAGCCAGGCG...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCACGCCTGGCTGCTGGCTaGCCGAAGCCTCCGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRSTSRGKIEAVCWPRPARLAAG*PKPPTL Trigger: CAGAGTCGGAGGCTTCGGCAAGCCAGCAGCCAGGCG...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTCGAGGGGGAGACCGCTaGCTGGAGGACTGGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: PPRSTSRGKIEAVCWPRPRGGDR*LEDWDS Trigger: ACTGTCCCAGTCCTCCAGCAAGCGGTCTCCCCCTCG...AGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCGAGGGGGAGACCGCTaGCTGGAGGACTGGGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPEARSRPCAGPALHADRRGGDR*LEDWDS Trigger: ACTGTCCCAGTCCTCCAGCAAGCGGTCTCCCCCTCG...CCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGACAGGCACTAGGAGGGGAGTGTGCTaGTCAGGTCCTCCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRQDRGRVLAPPCMLTGTRRGVC*SGPPSS Trigger: GGAAGAGGGAGGACCTGACAAGCACACTCCCCTCCT...AGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCCCAGAAGTCGAGGTGTaGGAGCTTCACGTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPPEVEV*ELHVHL Trigger: AAGGTGGACGTGAAGCTCCAACACCTCGACTTCTGG...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTCTGAGGGCCCAGGGCTaGGACCACAGCATGAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPRSTSRGKIEAVCWPRPLRAQG*DHSMNK Trigger: TTTGTTCATGCTGTGGTCCAAGCCCTGGGCCCTCAG...AGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCACCAGAAGTCGAGGTGTaGGAGCTTCACGTCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRSTSRGKIEAVCWPRPAPEVEV*ELHVHL Trigger: AAGGTGGACGTGAAGCTCCAACACCTCGACTTCTGG...TGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CCCTCCTCGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCGGGGGATACACAATGTaGGGATTTACCCACATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSSVNFQRQDRGRVLAPPGGYTM*GFTHIQ Trigger: CTGGATGTGGGTAAATCCCAACATTGTGTATCCCCC...GGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCGAGGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS GCA 90 bp | AGCTGGCATCTTCCTCCTTCTGGGGTGGCTGAGAGGAGGGGAGTGTaGTTGTCAGGTCCTCCCTCTTCCTACGTCCTGAGACCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWHLPPSGVAERRGV*LSGPPSSYVLRPPA Trigger: AGCTGGAGGTCTCAGGACGTAGGAAGAGGGAGGACCTGACAAGCACACTCCCCTCCTCTCAGCCACCCCAGAAGGAGGAAGATGCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000533282.1 ENST00000626640.4 ENST00000634385.1 ENST00000634955.1 |
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| CDS-3UTR CAA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGGGGGATACACAATGTaGGGATTTACCCACATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQLPEARSRPCAGPALHAGGYTM*GFTHIQ Trigger: CTGGATGTGGGTAAATCCCAACATTGTGTATCCCCC...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | CGGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCGCTGGCTGTTGCTTCTaGGGGTTAAAGATCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTSRGKIEAVCWPRPACAGCCF*GLKIKE Trigger: CTCTTTGATCTTTAACCCCAAGAAGCAACAGCCAGC...GCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS-3UTR CAA 90 bp | GGTCAACTTCCAGAGGCAAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTGCTGGCTGTTGCTTCTaGGGGTTAAAGATCAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GQLPEARSRPCAGPALHAAGCCF*GLKIKE Trigger: CTCTTTGATCTTTAACCCCAAGAAGCAACAGCCAGC...AGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTTGCCTCTGGAAGTTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
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| CDS TCA 90 bp | AGAGGAGGGGAGTGTGCTTGTCAGGTCCTCCCTCTTCCTACGTCCTaGGACCTCCAGCTTTCCAGGGGGATACACAATGTTGGGATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RGGECACQVLPLPTS*DLQLSRGIHNVGIY Trigger: GTAAATCCCAACATTGTGTATCCCCCTGGAAAGCTGGAGGTCTCAGGACGTAGGAAGAGGGAGGACCTGACAAGCACACTCCCCTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000533282.1 ENST00000626640.4 ENST00000634385.1 ENST00000634955.1 |
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| CDS TCA 90 bp | ATTCGGAGTTTATACCTGGCAAGTTTCTGCTCCGCTAAGGGGAGGTaGGATGTGGTGAAGGCCAGAAAGAGCTCGTTCCCCATGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IRSLYLASFCSAKGR*DVVKARKSSFPMSQ Trigger: CTGGGACATGGGGAACGAGCTCTTTCTGGCCTTCACCACATCTCACCTCCCCTTAGCGGAGCAGAAACTTGCCAGGTATAAACTCCGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
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| CDS CCA 90 bp | TCCTACGTCCTGAGACCTCCAGCTTTCCAGGGGGATACACAATGTTaGGATTTACCCACATCCAGAGGTTGGGCTCATAATCTGGACCAT | + |
|
Preference number: 5 (lower is better) Translates to: SYVLRPPAFQGDTQC*DLPTSRGWAHNLDH Trigger: ATGGTCCAGATTATGAGCCCAACCTCTGGATGTGGGTAAATCCCAACATTGTGTATCCCCCTGGAAAGCTGGAGGTCTCAGGACGTAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000533282.1 ENST00000626640.4 ENST00000634385.1 ENST00000634955.1 |
||
| CDS CCA 72 bp | GTCGAGGTGTTGGAGCTTCACGTCCACCTTCGGGGCTaGCAGAGGCGCGGCGGCGCGGAGTGGGGACGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: VEVLELHVHLRG*QRRGGAEWGRG Trigger: TCCGCGTCCCCACTCCGCGCCGCCGCGCCTCTGCCAGCCCCGAAGGTGGACGTGAAGCTCCAACACCTCGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
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| CDS CAA 90 bp | CAGTCCCGGGACCTGGCCATGGAGGCGGGCCCAGAAGTCGAGGTGTaGGAGCTTCACGTCCACCTTCGGGGCTGGCAGAGGCGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: QSRDLAMEAGPEVEV*ELHVHLRGWQRRGG Trigger: GCCGCCGCGCCTCTGCCAGCCCCGAAGGTGGACGTGAAGCTCCAACACCTCGACTTCTGGGCCCGCCTCCATGGCCAGGTCCCGGGACTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
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| CDS CCA 72 bp | ACCTGGCCATGGAGGCGGGCCCAGAAGTCGAGGTGTTaGAGCTTCACGTCCACCTTCGGGGCTGGCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TWPWRRAQKSRC*SFTSTFGAGRG Trigger: GCCTCTGCCAGCCCCGAAGGTGGACGTGAAGCTCCAACACCTCGACTTCTGGGCCCGCCTCCATGGCCAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
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| CDS CAA 72 bp | GACCTGGCCATGGAGGCGGGCCCAGAAGTCGAGGTGTaGGAGCTTCACGTCCACCTTCGGGGCTGGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DLAMEAGPEVEV*ELHVHLRGWQR Trigger: CCTCTGCCAGCCCCGAAGGTGGACGTGAAGCTCCAACACCTCGACTTCTGGGCCCGCCTCCATGGCCAGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
||
| CDS TCA 72 bp | CCTCACAGGCGCCTTCTCAAATGCGCCGGCTCGGATTaGGTTAGCTTGGCGGCAGCTCAGGTGTGGAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: PHRRLLKCAGSD*VSLAAAQVWSG Trigger: ACCGCTCCACACCTGAGCTGCCGCCAAGCTAACTCAATCCGAGCCGGCGCATTTGAGAAGGCGCCTGTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS GCA 72 bp | CTTCCTCCTTCTGGGGTGGCTGAGAGGAGGGGAGTGTaGTTGTCAGGTCCTCCCTCTTCCTACGTCCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LPPSGVAERRGV*LSGPPSSYVLR Trigger: TCTCAGGACGTAGGAAGAGGGAGGACCTGACAAGCACACTCCCCTCCTCTCAGCCACCCCAGAAGGAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000533282.1 ENST00000626640.4 ENST00000634385.1 ENST00000634955.1 |
||
| CDS CAA 90 bp | TGGCATCTTCCTCCTTCTGGGGTGGCTGAGAGGAGGGGAGTGTGCTaGTCAGGTCCTCCCTCTTCCTACGTCCTGAGACCTCCAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WHLPPSGVAERRGVC*SGPPSSYVLRPPAF Trigger: GAAAGCTGGAGGTCTCAGGACGTAGGAAGAGGGAGGACCTGACAAGCACACTCCCCTCCTCTCAGCCACCCCAGAAGGAGGAAGATGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000533282.1 ENST00000626640.4 ENST00000634385.1 ENST00000634955.1 |
||
| CDS CAA 90 bp | CACTTTCTCAAAGCTGAACCCTCCCTCCCTCTGAGGGCCCAGGGCTaGGACCACAGCATGAACAAAGCAGAATCAGGCCAAGCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HFLKAEPSLPLRAQG*DHSMNKAESGQAAP Trigger: CGGAGCTGCTTGGCCTGATTCTGCTTTGTTCATGCTGTGGTCCAAGCCCTGGGCCCTCAGAGGGAGGGAGGGTTCAGCTTTGAGAAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531539.5 ENST00000634955.1 |
||
| CDS TCA 72 bp | AAGATCGAGGCCGTGTGCTGGCCCCGCCCTGCATGCTaGCAGGCACTTTCTCAAAGCTGTCTCGAAAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: KIEAVCWPRPAC*QALSQSCLENR Trigger: TCTGTTTTCGAGACAGCTTTGAGAAAGTGCCTGTCAGCATGCAGGGCGGGGCCAGCACACGGCCTCGATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000317011.8 ENST00000626640.4 |
||
| CDS TCA 72 bp | TTATACCTGGCAAGTTTCTGCTCCGCTAAGGGGAGGTaGGATGTGGTGAAGGCCAGAAAGAGCTCGTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LYLASFCSAKGR*DVVKARKSSFP Trigger: GGGGAACGAGCTCTTTCTGGCCTTCACCACATCTCACCTCCCCTTAGCGGAGCAGAAACTTGCCAGGTATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000626640.4 ENST00000634955.1 |
||
| CDS CCA 72 bp | CTGAGACCTCCAGCTTTCCAGGGGGATACACAATGTTaGGATTTACCCACATCCAGAGGTTGGGCTCATAAT | + |
|
Preference number: 6 (lower is better) Translates to: LRPPAFQGDTQC*DLPTSRGWAHN Trigger: ATTATGAGCCCAACCTCTGGATGTGGGTAAATCCCAACATTGTGTATCCCCCTGGAAAGCTGGAGGTCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000533282.1 ENST00000626640.4 ENST00000634385.1 ENST00000634955.1 |
||
| CDS CCA 72 bp | GATACACAATGTTGGGATTTACCCACATCCAGAGGTTaGGCTCATAATCTGGACCATCCTTATCAGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: DTQCWDLPTSRG*AHNLDHPYQGW Trigger: CCAACCCTGATAAGGATGGTCCAGATTATGAGCCCAACCTCTGGATGTGGGTAAATCCCAACATTGTGTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000317011.8 ENST00000531539.5 ENST00000533282.1 ENST00000626640.4 ENST00000634385.1 ENST00000634955.1 |
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