Pregenerated sensors for FOXQ1 (Homo sapiens)
Ensembl gene IDs: ENSG00000164379Ensembl transcript IDs: ENST00000296839.5
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGTGAAGCATCGGTCAATAGCAAGAAATCACTGAAGAGCCTCTaGCATGTCTCTCACACTCAGTCATACCTGGAAATGCCACATACG | + |
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Preference number: 1 (lower is better) Translates to: HSEASVNSKKSLKSL*HVSHTQSYLEMPHT Trigger: CGTATGTGGCATTTCCAGGTATGACTGAGTGTGAGAGACATGTCAGAGGCTCTTCAGTGATTTCTTGCTATTGACCGATGCTTCACTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| 3UTR TCA 90 bp | TTCTCTTTTGGCACAGTGAAGCATCGGTCAATAGCAAGAAATCACTaGAGAGCCTCTGACATGTCTCTCACACTCAGTCATACCTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: FSFGTVKHRSIARNH*RASDMSLTLSHTWK Trigger: TTTCCAGGTATGACTGAGTGTGAGAGACATGTCAGAGGCTCTTCAGTGATTTCTTGCTATTGACCGATGCTTCACTGTGCCAAAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| 3UTR-3UTR GCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAACCTCTGGATTCAAAGTaGAAAGTCCGCGCGCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: VATKTVEIRRSLGVKERQPLDSK*KVRARA Trigger: GGCCCGCGCGCGGACTTTGCACTTTGAATCCAGAGG...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAAACATACGTACACGGATaGGGGCCCAGAAACCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: SRQWSWHPTYIINFSFKETYVHG*GPRNPK Trigger: TTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGT...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAAATAGCAAGAAATCACTaGAGAGCCTCTGACATGTCT | + |
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Preference number: 2 (lower is better) Translates to: SRQWSWHPTYIINFSFKEIARNH*RASDMS Trigger: AGACATGTCAGAGGCTCTTCAGTGATTTCTTGCTAT...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| 3UTR CCA 72 bp | AGAGCCTCTGACATGTCTCTCACACTCAGTCATACCTaGAAATGCCACATACGTACACGGATGGGGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RASDMSLTLSHT*KCHIRTRMGAQ Trigger: CTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTATGACTGAGTGTGAGAGACATGTCAGAGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| 3UTR GCA 72 bp | TCTGACATGTCTCTCACACTCAGTCATACCTGGAAATaGCACATACGTACACGGATGGGGGCCCAGAAACCC | + |
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Preference number: 3 (lower is better) Translates to: SDMSLTLSHTWK*HIRTRMGAQKP Trigger: GGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTATGACTGAGTGTGAGAGACATGTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| 3UTR TCA 72 bp | GGCACAGTGAAGCATCGGTCAATAGCAAGAAATCACTaGAGAGCCTCTGACATGTCTCTCACACTCAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: GTVKHRSIARNH*RASDMSLTLSH Trigger: ATGACTGAGTGTGAGAGACATGTCAGAGGCTCTTCAGTGATTTCTTGCTATTGACCGATGCTTCACTGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTTCCCTGCTTGTCCCCGTaGGCCGCGCGAGGGACGAAC | + |
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Preference number: 4 (lower is better) Translates to: KSARGPAFPPPRRRALGVPCLSP*AARGTN Trigger: GTTCGTCCCTCGCGCGGCCCACGGGGACAAGCAGGG...AACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTTATGTGCGTGCCACCGTaGGGGAAGGTCCGGCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KSARGPAFPPPRRRALGVMCVPP*GKVRRL Trigger: AAGGCGCCGGACCTTCCCCCACGGTGGCACGCACAT...AACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | AAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTGCGTATATGGCTTGCTaGGTGCACCCTCGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVRARARVPASPTARTRRAYMAC*VHPRRS Trigger: GGAGCGGCGAGGGTGCACGCAGCAAGCCATATACGC...ACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTTGGCTGCGGAAGGGCTTaGGCAGGATGCTGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: KSARGPAFPPPRRRALGVGCGRA*AGCCRW Trigger: CCATCGACAGCATCCTGCGCAAGCCCTTCCGCAGCC...AACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCACCGGGTACGGCAGGTaGGGGCCAGGGCGGCGGACT | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGTGYGR*GPGRRT Trigger: AGTCCGCCGCCCTGGCCCGCACCTGCCGTACCCGGT...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTTGGGGCACGGAAATGGTaGCGGATGATGTGCGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KSARGPAFPPPRRRALGVGARKW*RMMCVP Trigger: TGGCACGCACATCATCCGGCACCATTTCCGTGCCCC...AACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | AAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTTGCCAGCCCGTGTAGCTaGCGCGGAAAAAGGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: KSARGPAFPPPRRRALGVASPCS*RGKRGT Trigger: AGTTCCCCTTTTTCCGCGGCAGCTACACGGGCTGGC...AACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTTGCTGCAAGTGTTGGGTaGACTATGGGGCGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: KSARGPAFPPPRRRALGVAASVG*TMGRRG Trigger: CCCTCTCCGCCCCATAGTCCACCCAACACTTGCAGC...AACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCCACCGCTGCAGCAGCTaGTGCCGGGATCGCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGHRCSS*CRDRLL Trigger: GAGGAGGCGATCCCGGCAGCAGCTGCTGCAGCGGTG...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR TCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGGAAATGGTGCCGGATaGTGTGCGTGCCACCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGGNGAG*CACHRG Trigger: CCCACGGTGGCACGCACATCATCCGGCACCATTTCC...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCTCCAGTAGTTGTCCTTaGCCCAGGGCCGCGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGSSSCP*PRAARG Trigger: ACCCCTCGCGGCCCTGGGGCAAGGACAACTACTGGA...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGAGGGAGGAGTTGGGTaGGTGTCGCCTTCGGTTCGA | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGEGGVG*VSPSVR Trigger: TCGAACCGAAGGCGACACCCACCCAACTCCTCCCTC...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCTCGACGTTGAGACTTTaGGGTGAGTGTGTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGSTLRL*GECVQG Trigger: CCCCTGCACACACTCACCCCAAAGTCTCAACGTCGA...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCAGCATGCGCATCTGCTaGTCGTTAAAGAGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGSMRIC*SLKSPG Trigger: TCCTGGGCTCTTTAACGAGCAGCAGATGCGCATGCT...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCACATACGTACACGGATaGGGGCCCAGAAACCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGTYVHG*GPRNPK Trigger: TTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGT...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCTCAAGGCAGTGGTCCTaGCACCCCACATACATAATC | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGSRQWS*HPTYII Trigger: GATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | AAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTTATATCATTTATAGTGTaGAAAGGTTCCCTGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: KSARGPAFPPPRRRALGVISFIV*KGSLMY Trigger: GTACATCAGGGAACCTTTCCACACTATAAATGATAT...AACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR TCA 90 bp | TACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTCGCGCAGTCCCCATCTaGGCCCAGGGAGTCGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: YLEMPHTYTDGGPETPNSRAVPI*AQGVVS Trigger: GGAGACGACTCCCTGGGCTCAGATGGGGACTGCGCG...ACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | TACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTCGCCCTCCAGGTCACTaGCCTGCTTGTCCCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YLEMPHTYTDGGPETPNSRPPGH*PACPRG Trigger: CCCACGGGGACAAGCAGGGCAGTGACCTGGAGGGCG...ACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | CCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTAGTCATATCATTCCGCGGCCGGGCTGTTaGCCGCGCAGTCCCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: PHTYTDGGPETPNSSHIIPRPGC*PRSPHL Trigger: CAGATGGGGACTGCGCGGCCAACAGCCCGGCCGCGG...AATGATATGACTACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCACACTCAGTCATACCTaGAAATGCCACATACGTACA | + |
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Preference number: 4 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGTLSHT*KCHIRT Trigger: TGTACGTATGTGGCATTTCCAGGTATGACTGAGTGT...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | CCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTAGTCATATCATTCGCTGCAGCAGCTGCTaGCGGGATCGCCTCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PHTYTDGGPETPNSSHIIRCSSC*RDRLLR Trigger: GCGGAGGAGGCGATCCCGGCAGCAGCTGCTGCAGCG...AATGATATGACTACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | TACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTCGATGGCGAAGGAGCTaGAGAACTTGCCCGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: YLEMPHTYTDGGPETPNSRWRRS*RTCPRG Trigger: GCCCCGCGGGCAAGTTCTCCAGCTCCTTCGCCATCG...ACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | TACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTTGGTGCCGGATGATGTaGGTGCCACCGTGGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: YLEMPHTYTDGGPETPNSWCRMM*VPPWGK Trigger: CTTCCCCCACGGTGGCACGCACATCATCCGGCACCA...ACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | TACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTCCTCTGGATTCAAAGTaGAAAGTCCGCGCGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: YLEMPHTYTDGGPETPNSPLDSK*KVRARA Trigger: GGCCCGCGCGCGGACTTTGCACTTTGAATCCAGAGG...ACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | CACACTCAGTCATACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAATTCGGGGCACGGAAATaGTGCCGGATGATGTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: HTQSYLEMPHTYTDGGPEFGARK*CRMMCV Trigger: CACGCACATCATCCGGCACCATTTCCGTGCCCCGAA...TTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTATGACTGAGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | CCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTAGTCATATCATTAGGGCTTGCGCAGGATaGTGTCGATGGCGAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PHTYTDGGPETPNSSHIIRACAG*CRWRRS Trigger: GCTCCTTCGCCATCGACAGCATCCTGCGCAAGCCCT...AATGATATGACTACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAAGCAGCATCTCCCCGCTaGCCTGCCGCGGCTGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: SRQWSWHPTYIINFSFKEAASPR*PAAAAS Trigger: AGACGCAGCCGCGGCAGGCCAGCGGGGAGATGCTGC...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | TACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTGCAGGATGCTGTCGATaGCGAAGGAGCTGGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: YLEMPHTYTDGGPETPNSAGCCR*RRSWRT Trigger: AGTTCTCCAGCTCCTTCGCCATCGACAGCATCCTGC...ACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAAGGAGGGGTTCTTCACTaGCGGTCCCAGGTCCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: SRQWSWHPTYIINFSFKEGGVLH*RSQVPR Trigger: GCGCGGGACCTGGGACCGCCAGTGAAGAACCCCTCC...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | CACACTCAGTCATACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAATTGCTTTCAAGGCAGTaGTCCTGGCACCCCACATAC | + |
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Preference number: 4 (lower is better) Translates to: HTQSYLEMPHTYTDGGPELLSRQ*SWHPTY Trigger: GTATGTGGGGTGCCAGGACCACTGCCTTGAAAGCAA...TTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTATGACTGAGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR TCA 90 bp | CCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTAGTCATATCATTCCTTCGGTTCGACGTTaGGACTTTGGGGTGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: PHTYTDGGPETPNSSHIIPSVRR*DFGVSV Trigger: CACACTCACCCCAAAGTCTCAACGTCGAACCGAAGG...AATGATATGACTACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAACTCCGCCACCACCGCTaGAGCAGCTGCTGCCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VATKTVEIRRSLGVKERQLRHHR*SSCCRD Trigger: ATCCCGGCAGCAGCTGCTGCAGCGGTGGTGGCGGAG...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAAATATGGCTTGCTGCGTaGACCCTCGCCGCTCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SRQWSWHPTYIINFSFKEIWLAA*TLAAPR Trigger: GCGGGGAGCGGCGAGGGTGCACGCAGCAAGCCATAT...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GAAGTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGAAGGAGCTGGAGAACTTaGCCGCGGGGCTGGCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: EVATKTVEIRRSLGVKERRSWRT*PRGWRA Trigger: AGCGCGCCAGCCCCGCGGGCAAGTTCTCCAGCTCCT...TCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAAAAAGGTTCCACCCTCGGGTaGCCGAGCACGCCGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: ATKTVEIRRSLGVKERQKGSTLG*PSTPGL Trigger: TAAGCCCGGCGTGCTCGGGCACCCGAGGGTGGAACC...TTTTTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAAGCCGCGTATATGGCTTaGTGCGTGCACCCTCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: VATKTVEIRRSLGVKERQAAYMA*CVHPRR Trigger: GCGGCGAGGGTGCACGCAGCAAGCCATATACGCGGC...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAAGGGCCGCCGCGTATATaGCTTGCTGCGTGCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: VATKTVEIRRSLGVKERQGPPRI*LAACTL Trigger: GAGGGTGCACGCAGCAAGCCATATACGCGGCGGCCC...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR TCA 90 bp | GAAGTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGAGTTGAGACTTTGGGGTaGGTGTGTGCAGGGGCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVATKTVEIRRSLGVKERVETLG*VCAGAA Trigger: CGCGGCCCCTGCACACACTCACCCCAAAGTCTCAAC...TCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAATTTGGGGTGAGTGTGTaGAGGGGCCGCGGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VATKTVEIRRSLGVKERQFGVSV*RGRGST Trigger: GGTGGAACCGCGGCCCCTGCACACACTCACCCCAAA...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAACGGAGAGGGAGGAGTTaGGTGGGTGTCGCCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VATKTVEIRRSLGVKERQRRGRS*VGVAFG Trigger: ACCGAAGGCGACACCCACCCAACTCCTCCCTCTCCG...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAAAGGGGCTGCAAGTGTTaGGTGGACTATGGGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VATKTVEIRRSLGVKERQRGCKC*VDYGAE Trigger: CTCCGCCCCATAGTCCACCCAACACTTGCAGCCCCT...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAAGGAGTCCTCTTCCGCTaGGCTTTTTCTCTGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRQWSWHPTYIINFSFKEGVLFR*AFSLEG Trigger: CCCCTCCAGAGAAAAAGCCCAGCGGAAGAGGACTCC...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAACCGGGAGCTCTACCCTaGTCTTCCGAGATAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SRQWSWHPTYIINFSFKEPGALP*SSEIVT Trigger: AGTGACTATCTCGGAAGACCAGGGTAGAGCTCCCGG...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR TCA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAAACTCGCTGTTGGGGTTaGGCATCCAGTAGTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRQWSWHPTYIINFSFKETRCWG*ASSSCP Trigger: AGGACAACTACTGGATGCTCAACCCCAACAGCGAGT...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CCA 90 bp | CCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTAGTCATATCATTTTTAAAGAAATTGCTTaGCCCAAGGAGACCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHTYTDGGPETPNSSHIIFKEIA*PKETTV Trigger: AACTGTGGTCTCCTTGGGCCAAGCAATTTCTTTAAA...AATGATATGACTACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR TCA 90 bp | GAAGTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGATCACTGAAGAGCCTCTaGCATGTCTCTCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVATKTVEIRRSLGVKERSLKSL*HVSHTQ Trigger: CTGAGTGTGAGAGACATGTCAGAGGCTCTTCAGTGA...TCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAAAAATTTCTCTGGAGGGGCTaGAAGTGTTGGGTGGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: ATKTVEIRRSLGVKERQKFLWRG*KCWVDY Trigger: ATAGTCCACCCAACACTTGCAGCCCCTCCAGAGAAA...TTTTTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GAAGTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGAAGTCATACCTGGAAATaGCACATACGTACACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVATKTVEIRRSLGVKERSHTWK*HIRTRM Trigger: CATCCGTGTACGTATGTGGCATTTCCAGGTATGACT...TCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR TCA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAAATAGCAAGAAATCACTaGAGAGCCTCTGACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VATKTVEIRRSLGVKERQIARNH*RASDMS Trigger: AGACATGTCAGAGGCTCTTCAGTGATTTCTTGCTAT...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR GCA 90 bp | GAAGTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGAAAAGCTGTAGCCCGTTaGCTGCAACATTTTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: EVATKTVEIRRSLGVKERKAVAR*LQHFQF Trigger: GAATTGAAAATGTTGCAGGCAACGGGCTACAGCTTT...TCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAACTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 90 bp | ACCGGGTACGGCAGGTGCGGGCCAGGGCGGCGGACTGAGGCCGCCTaGAGGGCTGCGGGCAGCCGCAGGGGGCAGTACAGGTGCGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGYGRCGPGRRTEAA*RAAGSRRGQYRCAP Trigger: CGGCGCGCACCTGTACTGCCCCCTGCGGCTGCCCGCAGCCCTGCAGGCGGCCTCAGTCCGCCGCCCTGGCCCGCACCTGCCGTACCCGGT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 90 bp | CCAGGGAGTCGTCTCCCGCCGCCGACAGCGGGGACGGCGCGTCGCTaGCGCCCGCGCCCTCCAGGTCACTGCCCTGCTTGTCCCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGSRLPPPTAGTARR*RPRPPGHCPACPRG Trigger: CCCACGGGGACAAGCAGGGCAGTGACCTGGAGGGCGCGGGCGGCAGCGACGCGCCGTCCCCGCTGTCGGCGGCGGGAGACGACTCCCTGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 90 bp | CCGGCCCGCCTCCCGCACTCTGTTCGCCGTCGCCCTGCGTATCTCTaGCGCCGCCGCCCGCGGCCGGGCTGTTGGCCGCGCAGTCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PARLPHSVRRRPAYL*RRRPRPGCWPRSPH Trigger: ATGGGGACTGCGCGGCCAACAGCCCGGCCGCGGGCGGCGGCGCCAGAGATACGCAGGGCGACGGCGAACAGAGTGCGGGAGGCGGGCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 90 bp | CGCGGCGCTACTCAGGCTAGGAGCGTCTCCACCGGGTACGGCAGGTaGGGGCCAGGGCGGCGGACTGAGGCCGCCTGCAGGGCTGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGATQARSVSTGYGR*GPGRRTEAACRAAG Trigger: GCCCGCAGCCCTGCAGGCGGCCTCAGTCCGCCGCCCTGGCCCGCACCTGCCGTACCCGGTGGAGACGCTCCTAGCCTGAGTAGCGCCGCG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 90 bp | CGTCGCCCTGCGTATCTCTGGCGCCGCCGCCCGCGGCCGGGCTGTTaGCCGCGCAGTCCCCATCTGAGCCCAGGGAGTCGTCTCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRPAYLWRRRPRPGC*PRSPHLSPGSRLPP Trigger: CGGCGGGAGACGACTCCCTGGGCTCAGATGGGGACTGCGCGGCCAACAGCCCGGCCGCGGGCGGCGGCGCCAGAGATACGCAGGGCGACG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | AAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTAGGTCACTGCCCTGCTaGTCCCCGTGGGCCGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KVRARARVPASPTARTRRRSLPC*SPWAAR Trigger: TCGCGCGGCCCACGGGGACAAGCAGGGCAGTGACCT...ACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 90 bp | ACAGCGGGGACGGCGCGTCGCTGCCGCCCGCGCCCTCCAGGTCACTaGCCTGCTTGTCCCCGTGGGCCGCGCGAGGGACGAACACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TAGTARRCRPRPPGH*PACPRGPREGRTPP Trigger: TGGAGGTGTTCGTCCCTCGCGCGGCCCACGGGGACAAGCAGGGCAGTGACCTGGAGGGCGCGGGCGGCAGCGACGCGCCGTCCCCGCTGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS TCA 90 bp | AGGGCGCGGCGCCCCACTGAAGCGTCGTCCCGGGGGCCGTGTCCCTaGGGCGGCGGCTGCGGAAGGGCTTGCGCAGGATGCTGTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RARRPTEASSRGPCP*GGGCGRACAGCCRW Trigger: CCATCGACAGCATCCTGCGCAAGCCCTTCCGCAGCCGCCGCCTCAGGGACACGGCCCCCGGGACGACGCTTCAGTGGGGCGCCGCGCCCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 90 bp | GGGGACGGCGCGTCGCTGCCGCCCGCGCCCTCCAGGTCACTGCCCTaGTTGTCCCCGTGGGCCGCGCGAGGGACGAACACCTCCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDGASLPPAPSRSLP*LSPWAARGTNTSNF Trigger: GAAGTTGGAGGTGTTCGTCCCTCGCGCGGCCCACGGGGACAAGCAGGGCAGTGACCTGGAGGGCGCGGGCGGCAGCGACGCGCCGTCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 90 bp | GGATGCTGTCGATGGCGAAGGAGCTGGAGAACTTGCCCGCGGGGCTaGCGCGCTCCTCCTGGCGGGCGGGCGAGCGCATGCGGGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCCRWRRSWRTCPRG*RAPPGGRASACGAR Trigger: CCTCGCCCCGCATGCGCTCGCCCGCCCGCCAGGAGGAGCGCGCCAGCCCCGCGGGCAAGTTCTCCAGCTCCTTCGCCATCGACAGCATCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS TCA 90 bp | ATGATGTGCGTGCCACCGTGGGGGAAGGTCCGGCGCCTTCAGCCTTaGGCACCCGCGGAGGCGAGTCCCCGAGGCCGCTGCGCCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MMCVPPWGKVRRLQP*APAEASPRGRCARS Trigger: GCTGCGGGCGCAGCGGCCTCGGGGACTCGCCTCCGCGGGTGCTCAAGGCTGAAGGCGCCGGACCTTCCCCCACGGTGGCACGCACATCAT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | GGATTCAAAGTGCAAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCCCGGCGCCTTCAGCCTaGAGCACCCGCGGAGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GFKVQSPRAGPRSRLPDGPAPSA*STRGGE Trigger: CTCGCCTCCGCGGGTGCTCAAGGCTGAAGGCGCCGG...GCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTTGCACTTTGAATCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | AAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTGAGGGGCTGCAAGTGTaGGGTGGACTATGGGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KVRARARVPASPTARTRREGLQV*GGLWGG Trigger: TCCGCCCCATAGTCCACCCAACACTTGCAGCCCCTC...ACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 90 bp | GGCGGTCCCAGGTCCCGCGCGGGCGTCTTCGGGGCACGGAAATGGTaGCGGATGATGTGCGTGCCACCGTGGGGGAAGGTCCGGCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GGPRSRAGVFGARKW*RMMCVPPWGKVRRL Trigger: AAGGCGCCGGACCTTCCCCCACGGTGGCACGCACATCATCCGGCACCATTTCCGTGCCCCGAAGACGCCCGCGCGGGACCTGGGACCGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 90 bp | ACTGGCGGTCCCAGGTCCCGCGCGGGCGTCTTCGGGGCACGGAAATaGTGCCGGATGATGTGCGTGCCACCGTGGGGGAAGGTCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TGGPRSRAGVFGARK*CRMMCVPPWGKVRR Trigger: GCGCCGGACCTTCCCCCACGGTGGCACGCACATCATCCGGCACCATTTCCGTGCCCCGAAGACGCCCGCGCGGGACCTGGGACCGCCAGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 90 bp | TCGCTGCCGCCCGCGCCCTCCAGGTCACTGCCCTGCTTGTCCCCGTaGGCCGCGCGAGGGACGAACACCTCCAACTTCATGCCCGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLPPAPSRSLPCLSP*AARGTNTSNFMPAH Trigger: GTGCGCGGGCATGAAGTTGGAGGTGTTCGTCCCTCGCGCGGCCCACGGGGACAAGCAGGGCAGTGACCTGGAGGGCGCGGGCGGCAGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS TCA 90 bp | CCAGGTCCCGCGCGGGCGTCTTCGGGGCACGGAAATGGTGCCGGATaGTGTGCGTGCCACCGTGGGGGAAGGTCCGGCGCCTTCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGPARASSGHGNGAG*CACHRGGRSGAFSL Trigger: AAGGCTGAAGGCGCCGGACCTTCCCCCACGGTGGCACGCACATCATCCGGCACCATTTCCGTGCCCCGAAGACGCCCGCGCGGGACCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | AAAGTCCGCGCGCGGGCCCGCGTTCCCGCCTCCCCGACGGCGCGCACTCGGCGTCGGAAAAAGGGGAACTaGCCCATGAGGTACTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVRARARVPASPTARTRRRKKGN*PMRYSL Trigger: CAACGAGTACCTCATGGGCAAGTTCCCCTTTTTCCG...ACGCCGAGTGCGCGCCGTCGGGGAGGCGGGAACGCGGGCCCGCGCGCGGACTTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 90 bp | GGGAGGAGTTGGGTGGGTGTCGCCTTCGGTTCGACGTTGAGACTTTaGGGTGAGTGTGTGCAGGGGCCGCGGTTCCACCCTCGGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GRSWVGVAFGSTLRL*GECVQGPRFHPRVP Trigger: GGGCACCCGAGGGTGGAACCGCGGCCCCTGCACACACTCACCCCAAAGTCTCAACGTCGAACCGAAGGCGACACCCACCCAACTCCTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS TCA 90 bp | GAGTTGGGTGGGTGTCGCCTTCGGTTCGACGTTGAGACTTTGGGGTaGGTGTGTGCAGGGGCCGCGGTTCCACCCTCGGGTGCCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ELGGCRLRFDVETLG*VCAGAAVPPSGARA Trigger: TGCTCGGGCACCCGAGGGTGGAACCGCGGCCCCTGCACACACTCACCCCAAAGTCTCAACGTCGAACCGAAGGCGACACCCACCCAACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 90 bp | ATGCGCATCTGCTGCTCGTTAAAGAGCCCAGGAGGGGTTCTTCACTaGCGGTCCCAGGTCCCGCGCGGGCGTCTTCGGGGCACGGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: MRICCSLKSPGGVLH*RSQVPRGRLRGTEM Trigger: CATTTCCGTGCCCCGAAGACGCCCGCGCGGGACCTGGGACCGCCAGTGAAGAACCCCTCCTGGGCTCTTTAACGAGCAGCAGATGCGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | CCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTAGTCATATCATTCCCGCGGCCGGGCTGTaGGCCGCGCAGTCCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PHTYTDGGPETPNSSHIIPAAGL*AAQSPS Trigger: AGATGGGGACTGCGCGGCCAACAGCCCGGCCGCGGG...AATGATATGACTACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | TACCTGGAAATGCCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTCGCCGCGTATATGGCTaGCTGCGTGCACCCTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: YLEMPHTYTDGGPETPNSRRVYG*LRAPSP Trigger: CGGCGAGGGTGCACGCAGCAAGCCATATACGCGGCG...ACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGGCATTTCCAGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | GAAGTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGAAAGGAGCTGGAGAACTaGCCCGCGGGGCTGGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EVATKTVEIRRSLGVKERKELEN*PAGLAR Trigger: GCGCGCCAGCCCCGCGGGCAAGTTCTCCAGCTCCTT...TCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | CCACATACGTACACGGATGGGGGCCCAGAAACCCCAAACAGTAGTCATATCATTGCCTTCGGTTCGACGTaGAGACTTTGGGGTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PHTYTDGGPETPNSSHIIAFGST*RLWGEC Trigger: ACACTCACCCCAAAGTCTCAACGTCGAACCGAAGGC...AATGATATGACTACTGTTTGGGGTTTCTGGGCCCCCATCCGTGTACGTATGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | GAAGTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGAGCGGAGAGGGAGGAGTaGGGTGGGTGTCGCCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: EVATKTVEIRRSLGVKERAEREE*GGCRLR Trigger: CCGAAGGCGACACCCACCCAACTCCTCCCTCTCCGC...TCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | TCAAGGCAGTGGTCCTGGCACCCCACATACATAATCAACTTTTCCTTTAAAGAACGGCTGCGGAAGGGCTaGCGCAGGATGCTGTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SRQWSWHPTYIINFSFKERLRKG*RRMLSM Trigger: CATCGACAGCATCCTGCGCAAGCCCTTCCGCAGCCG...TTCTTTAAAGGAAAAGTTGATTATGTATGTGGGGTGCCAGGACCACTGCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | GCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAAAAACCCATGAGGTACTCGTaGATCTCCGCCAGCGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ATKTVEIRRSLGVKERQKPMRYS*ISASVK Trigger: CTTGACGCTGGCGGAGATCAACGAGTACCTCATGGG...TTTTTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS-3UTR CAA 90 bp | GTTGCGACAAAAACAGTAGAAATAAGACGAAGCCTGGGCGTTAAAGAAAGACAATTTCCTTTAAAGAAATaGCTTGGCCCAAGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: VATKTVEIRRSLGVKERQFPLKK*LGPRRP Trigger: TGGTCTCCTTGGGCCAAGCAATTTCTTTAAAGGAAA...TTGTCTTTCTTTAACGCCCAGGCTTCGTCTTATTTCTACTGTTTTTGTCGCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CAA 90 bp | GGCCGCAGCCCGGGCGCGGGGACCGGCGCGCGGTGGCTGAGGCGCTaGCGGCGGCGGCGGAAGACCCCGTCGGCGAAGGTGTACTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRSPGAGTGARWLRR*RRRRKTPSAKVYSL Trigger: CAGCGAGTACACCTTCGCCGACGGGGTCTTCCGCCGCCGCCGCAAGCGCCTCAGCCACCGCGCGCCGGTCCCCGCGCCCGGGCTGCGGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | TGCAGGGCTGCGGGCAGCCGCAGGGGGCAGTACAGGTaGGCGCCGCCGGCCGCCGGGCCTCGGAGTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CRAAGSRRGQYR*APPAAGPRSGL Trigger: CAAGCCACTCCGAGGCCCGGCGGCCGGCGGCGCGCACCTGTACTGCCCCCTGCGGCTGCCCGCAGCCCTGCA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | GGCAGGTGCGGGCCAGGGCGGCGGACTGAGGCCGCCTaGAGGGCTGCGGGCAGCCGCAGGGGGCAGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRCGPGRRTEAA*RAAGSRRGQYR Trigger: CCTGTACTGCCCCCTGCGGCTGCCCGCAGCCCTGCAGGCGGCCTCAGTCCGCCGCCCTGGCCCGCACCTGCC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | ACGGCGCGTCGCTGCCGCCCGCGCCCTCCAGGTCACTaGCCTGCTTGTCCCCGTGGGCCGCGCGAGGGACGA | + |
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Preference number: 6 (lower is better) Translates to: TARRCRPRPPGH*PACPRGPREGR Trigger: TCGTCCCTCGCGCGGCCCACGGGGACAAGCAGGGCAGTGACCTGGAGGGCGCGGGCGGCAGCGACGCGCCGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | CGTCTCCCGCCGCCGACAGCGGGGACGGCGCGTCGCTaGCGCCCGCGCCCTCCAGGTCACTGCCCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RLPPPTAGTARR*RPRPPGHCPAC Trigger: ACAAGCAGGGCAGTGACCTGGAGGGCGCGGGCGGCAGCGACGCGCCGTCCCCGCTGTCGGCGGCGGGAGACG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 72 bp | CTCCCGCACTCTGTTCGCCGTCGCCCTGCGTATCTCTaGCGCCGCCGCCCGCGGCCGGGCTGTTGGCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: LPHSVRRRPAYL*RRRPRPGCWPR Trigger: GCGCGGCCAACAGCCCGGCCGCGGGCGGCGGCGCCAGAGATACGCAGGGCGACGGCGAACAGAGTGCGGGAG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CAA 90 bp | CCGTCGCCCTGCGTATCTCTGGCGCCGCCGCCCGCGGCCGGGCTGTaGGCCGCGCAGTCCCCATCTGAGCCCAGGGAGTCGTCTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: PSPCVSLAPPPAAGL*AAQSPSEPRESSPA Trigger: GGCGGGAGACGACTCCCTGGGCTCAGATGGGGACTGCGCGGCCAACAGCCCGGCCGCGGGCGGCGGCGCCAGAGATACGCAGGGCGACGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS TCA 72 bp | GTGCCACCGTGGGGGAAGGTCCGGCGCCTTCAGCCTTaGGCACCCGCGGAGGCGAGTCCCCGAGGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VPPWGKVRRLQP*APAEASPRGRC Trigger: GCAGCGGCCTCGGGGACTCGCCTCCGCGGGTGCTCAAGGCTGAAGGCGCCGGACCTTCCCCCACGGTGGCAC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 72 bp | GCGTATCTCTGGCGCCGCCGCCCGCGGCCGGGCTGTTaGCCGCGCAGTCCCCATCTGAGCCCAGGGAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: AYLWRRRPRPGC*PRSPHLSPGSR Trigger: ACGACTCCCTGGGCTCAGATGGGGACTGCGCGGCCAACAGCCCGGCCGCGGGCGGCGGCGCCAGAGATACGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 72 bp | CGATGGCGAAGGAGCTGGAGAACTTGCCCGCGGGGCTaGCGCGCTCCTCCTGGCGGGCGGGCGAGCGCATGC | + |
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Preference number: 6 (lower is better) Translates to: RWRRSWRTCPRG*RAPPGGRASAC Trigger: GCATGCGCTCGCCCGCCCGCCAGGAGGAGCGCGCCAGCCCCGCGGGCAAGTTCTCCAGCTCCTTCGCCATCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CAA 72 bp | CGTGCCACCGTGGGGGAAGGTCCGGCGCCTTCAGCCTaGAGCACCCGCGGAGGCGAGTCCCCGAGGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: RATVGEGPAPSA*STRGGESPRPL Trigger: CAGCGGCCTCGGGGACTCGCCTCCGCGGGTGCTCAAGGCTGAAGGCGCCGGACCTTCCCCCACGGTGGCACG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | ACTCAGGCTAGGAGCGTCTCCACCGGGTACGGCAGGTaGGGGCCAGGGCGGCGGACTGAGGCCGCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TQARSVSTGYGR*GPGRRTEAACR Trigger: CCTGCAGGCGGCCTCAGTCCGCCGCCCTGGCCCGCACCTGCCGTACCCGGTGGAGACGCTCCTAGCCTGAGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CAA 90 bp | GATGATGTGCGTGCCACCGTGGGGGAAGGTCCGGCGCCTTCAGCCTaGAGCACCCGCGGAGGCGAGTCCCCGAGGCCGCTGCGCCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: DDVRATVGEGPAPSA*STRGGESPRPLRPQ Trigger: CTGCGGGCGCAGCGGCCTCGGGGACTCGCCTCCGCGGGTGCTCAAGGCTGAAGGCGCCGGACCTTCCCCCACGGTGGCACGCACATCATC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS TCA 72 bp | GCGCGGGCGTCTTCGGGGCACGGAAATGGTGCCGGATaGTGTGCGTGCCACCGTGGGGGAAGGTCCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: ARASSGHGNGAG*CACHRGGRSGA Trigger: GGCGCCGGACCTTCCCCCACGGTGGCACGCACATCATCCGGCACCATTTCCGTGCCCCGAAGACGCCCGCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 72 bp | CCCAGGTCCCGCGCGGGCGTCTTCGGGGCACGGAAATaGTGCCGGATGATGTGCGTGCCACCGTGGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PRSRAGVFGARK*CRMMCVPPWGK Trigger: CTTCCCCCACGGTGGCACGCACATCATCCGGCACCATTTCCGTGCCCCGAAGACGCCCGCGCGGGACCTGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CAA 72 bp | GGGGCCGTGTCCCTGAGGCGGCGGCTGCGGAAGGGCTaGCGCAGGATGCTGTCGATGGCGAAGGAGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GAVSLRRRLRKG*RRMLSMAKELE Trigger: CTCCAGCTCCTTCGCCATCGACAGCATCCTGCGCAAGCCCTTCCGCAGCCGCCGCCTCAGGGACACGGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CAA 90 bp | GTCGTCCCGGGGGCCGTGTCCCTGAGGCGGCGGCTGCGGAAGGGCTaGCGCAGGATGCTGTCGATGGCGAAGGAGCTGGAGAACTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: VVPGAVSLRRRLRKG*RRMLSMAKELENLP Trigger: GGGCAAGTTCTCCAGCTCCTTCGCCATCGACAGCATCCTGCGCAAGCCCTTCCGCAGCCGCCGCCTCAGGGACACGGCCCCCGGGACGAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | AGGTCCCGCGCGGGCGTCTTCGGGGCACGGAAATGGTaGCGGATGATGTGCGTGCCACCGTGGGGGAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RSRAGVFGARKW*RMMCVPPWGKV Trigger: GACCTTCCCCCACGGTGGCACGCACATCATCCGGCACCATTTCCGTGCCCCGAAGACGCCCGCGCGGGACCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | GTGAGTGTGTGCAGGGGCCGCGGTTCCACCCTCGGGTaGCCGAGCACGCCGGGCTTAGAAGGCTTTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VSVCRGRGSTLG*PSTPGLEGFPA Trigger: GGCAGGAAAGCCTTCTAAGCCCGGCGTGCTCGGGCACCCGAGGGTGGAACCGCGGCCCCTGCACACACTCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | GGCGTCTTCGGGGCACGGAAATGGTGCCGGATGATGTaGGTGCCACCGTGGGGGAAGGTCCGGCGCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GVFGARKWCRMM*VPPWGKVRRLQ Trigger: CTGAAGGCGCCGGACCTTCCCCCACGGTGGCACGCACATCATCCGGCACCATTTCCGTGCCCCGAAGACGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 72 bp | TGCTGCTCGTTAAAGAGCCCAGGAGGGGTTCTTCACTaGCGGTCCCAGGTCCCGCGCGGGCGTCTTCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: CCSLKSPGGVLH*RSQVPRGRLRG Trigger: GCCCCGAAGACGCCCGCGCGGGACCTGGGACCGCCAGTGAAGAACCCCTCCTGGGCTCTTTAACGAGCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 72 bp | AGGGCTTGCGCAGGATGCTGTCGATGGCGAAGGAGCTaGAGAACTTGCCCGCGGGGCTGGCGCGCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RACAGCCRWRRS*RTCPRGWRAPP Trigger: AGGAGGAGCGCGCCAGCCCCGCGGGCAAGTTCTCCAGCTCCTTCGCCATCGACAGCATCCTGCGCAAGCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS TCA 72 bp | GGGTGTCGCCTTCGGTTCGACGTTGAGACTTTGGGGTaGGTGTGTGCAGGGGCCGCGGTTCCACCCTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: GCRLRFDVETLG*VCAGAAVPPSG Trigger: ACCCGAGGGTGGAACCGCGGCCCCTGCACACACTCACCCCAAAGTCTCAACGTCGAACCGAAGGCGACACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | CGGGTGCCCGAGCACGCCGGGCTTAGAAGGCTTTCCTaGCGGAGAGAAGCAGCATGCGCATCTGCTGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RVPEHAGLRRLS*RREAACASAAR Trigger: ACGAGCAGCAGATGCGCATGCTGCTTCTCTCCGGCAGGAAAGCCTTCTAAGCCCGGCGTGCTCGGGCACCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CAA 72 bp | CCGCGGAAAAAGGGGAACTTGCCCATGAGGTACTCGTaGATCTCCGCCAGCGTCAAGCGCCCGCCCGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PRKKGNLPMRYS*ISASVKRPPAE Trigger: CTCGGCGGGCGGGCGCTTGACGCTGGCGGAGATCAACGAGTACCTCATGGGCAAGTTCCCCTTTTTCCGCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS CCA 72 bp | TGGGTGGGTGTCGCCTTCGGTTCGACGTTGAGACTTTaGGGTGAGTGTGTGCAGGGGCCGCGGTTCCACCCT | + |
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Preference number: 6 (lower is better) Translates to: WVGVAFGSTLRL*GECVQGPRFHP Trigger: AGGGTGGAACCGCGGCCCCTGCACACACTCACCCCAAAGTCTCAACGTCGAACCGAAGGCGACACCCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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| CDS GCA 72 bp | GCTTTCCTGCCGGAGAGAAGCAGCATGCGCATCTGCTaGTCGTTAAAGAGCCCAGGAGGGGTTCTTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: AFLPERSSMRIC*SLKSPGGVLHW Trigger: CCAGTGAAGAACCCCTCCTGGGCTCTTTAACGAGCAGCAGATGCGCATGCTGCTTCTCTCCGGCAGGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296839.5 |
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