RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000137166

Ensembl transcript IDs: ENST00000307972.10, ENST00000373057.7, ENST00000373063.7, ENST00000409208.5, ENST00000451305.1, ENST00000670130.1

Found 877 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGGCCTGGCTCAGCCTGGTTCTGTCTCAGGTTGGGGGCGGGTCTaGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCACACA +
Preference number: 1 (lower is better)
Translates to: GGLAQPGSVSGWGRV*SQVGLLTRTPTGHT
Trigger: TGTGTGCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACAGAACCAGGCTGAGCCAGGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR TCA 90 bp CTTGGCTCCACCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTaGGGCGGTACCAGGCCTCTTCCCATGGGGGCGGCTGGAGGAGCC +
Preference number: 1 (lower is better)
Translates to: LGSTCRSAPGTDLCG*GGTRPLPMGAAGGA
Trigger: GGCTCCTCCAGCCGCCCCCATGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGGTGGAGCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR CCA 90 bp TTTAAGCGTGGAAGGGACAGGAGGCACAGGGGAACCGGAGGTGGGTaGGCCCTGTCCACAGTGAGGGCACATGCCCAGCGCCCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: FKRGRDRRHRGTGGG*ALSTVRAHAQRPCR
Trigger: CCTGCAGGGGCGCTGGGCATGTGCCCTCACTGTGGACAGGGCCCACCCACCTCCGGTTCCCCTGTGCCTCCTGTCCCTTCCACGCTTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 90 bp TCCATCCACTCACAGAAACCACCACCACAGCGACCCTCACGTTGCTaGTGCTCTGCCCAGGCTCCCCGAGCAGAGCGATCTTTCAGCTTT +
Preference number: 1 (lower is better)
Translates to: SIHSQKPPPQRPSRC*CSAQAPRAERSFSF
Trigger: AAAGCTGAAAGATCGCTCTGCTCGGGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTGTGGTGGTGGTTTCTGTGAGTGGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 90 bp TGGGTGTGGATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTaGGGCGGTGGTCCTCTCCATCCCTGCAGCAAATCAGCTGCCTTG +
Preference number: 1 (lower is better)
Translates to: WVWMSPELVAQVKEP*GGGPLHPCSKSAAL
Trigger: CAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATCCACACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTaGTCCTCTCCATCCCTGCAGCAAATCAGCTGCCTTGCTCCAACA +
Preference number: 1 (lower is better)
Translates to: DVSRAGGTGKRTLRR*SSPSLQQISCLAPT
Trigger: TGTTGGAGCAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 90 bp ACGCACACTAATGGTCCTACTGCTTCAGGATGCCACCACCACACCTaGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAG +
Preference number: 1 (lower is better)
Translates to: THTNGPTASGCHHHT*ALHTHTPIQAAPLK
Trigger: CTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCATTAGTGTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 90 bp ATCCACTCACAGAAACCACCACCACAGCGACCCTCACGTTGCTGCTaGTCTGCCCAGGCTCCCCGAGCAGAGCGATCTTTCAGCTTTAAT +
Preference number: 1 (lower is better)
Translates to: IHSQKPPPQRPSRCC*SAQAPRAERSFSFN
Trigger: ATTAAAGCTGAAAGATCGCTCTGCTCGGGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTGTGGTGGTGGTTTCTGTGAGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 90 bp GTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCTaGAGCAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTG +
Preference number: 1 (lower is better)
Translates to: VAQVKEPCGGGPLHP*SKSAALLQHSGKNL
Trigger: CAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 90 bp CCCACTATGATGACCATGGTCACCACACAGTGTGCCACGTGGGTGTaGACGCACACTAATGGTCCTACTGCTTCAGGATGCCACCACCAC +
Preference number: 1 (lower is better)
Translates to: PTMMTMVTTQCATWV*THTNGPTASGCHHH
Trigger: GTGGTGGTGGCATCCTGAAGCAGTAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGGTCATCATAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 90 bp CGTGAGCCCACTATGATGACCATGGTCACCACACAGTGTGCCACGTaGGTGTGCACGCACACTAATGGTCCTACTGCTTCAGGATGCCAC +
Preference number: 1 (lower is better)
Translates to: REPTMMTMVTTQCAT*VCTHTNGPTASGCH
Trigger: GTGGCATCCTGAAGCAGTAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGGTCATCATAGTGGGCTCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR TCA 90 bp CATTTGGCTGGAGAGTTCCAGCAGTTTGGTGATTTGTGGGAAGGGTaGTTGACTCCAGTTCAGCTTTCTCAACACCCTCCCCTCCCCTGC +
Preference number: 1 (lower is better)
Translates to: HLAGEFQQFGDLWEG*LTPVQLSQHPPLPC
Trigger: GCAGGGGAGGGGAGGGTGTTGAGAAAGCTGAACTGGAGTCAATCACCCTTCCCACAAATCACCAAACTGCTGGAACTCTCCAGCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 90 bp AGAACCCTGCGGCGGTGGTCCTCTCCATCCCTGCAGCAAATCAGCTaGCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGT +
Preference number: 1 (lower is better)
Translates to: RTLRRWSSPSLQQIS*LAPTLWQELGFQTS
Trigger: ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR TCA 90 bp CAGGTCCTTCTCCCAGCATTTGGCTGGAGAGTTCCAGCAGTTTGGTaGTTTGTGGGAAGGGTGATTGACTCCAGTTCAGCTTTCTCAACA +
Preference number: 1 (lower is better)
Translates to: QVLLPAFGWRVPAVW*FVGRVIDSSSAFST
Trigger: TGTTGAGAAAGCTGAACTGGAGTCAATCACCCTTCCCACAAATCACCAAACTGCTGGAACTCTCCAGCCAAATGCTGGGAGAAGGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGTCACACTGGGAGCTaGTGGCCCGGGCCTCCCCGG +
Preference number: 2 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGHTGS*WPGPPR
Trigger: CCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTGACC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCCTGGGTTTGAGGGGTaGCTAAGCCCCGCCTGCGGG +
Preference number: 2 (lower is better)
Translates to: VGGGSGARWACSHGPPQGPGFEG*LSPACG
Trigger: CCCGCAGGCGGGGCTTAGCCACCCCTCAAACCCAGG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACACTGGGAGCTGCTaGCCCGGGCCTCCCCGGTCT +
Preference number: 2 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPHTGSC*PGPPRS
Trigger: AGACCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTAGCCGGGGTCCAGCCTaGCCTTCCCCTGGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASSRGPA*PSPGLP
Trigger: CGGGAGCCCAGGGGAAGGCCAGGCTGGACCCCGGCT...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAACGGCCAGAGCCAGGTaGCAGGGGGCCCTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: GGCFFWGWRHSSSTQARATARAR*QGALGL
Trigger: CAAACCCAGGGCCCCCTGGCACCTGGCTCTGGCCGT...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGGAGCCAGGTGGGCCTaGTCACACGGACCCCCACAG +
Preference number: 2 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPGARWA*SHGPPQ
Trigger: CTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCATGGGGCCTGGATTCTaGAAGGGAGGGGTCTCACCC +
Preference number: 2 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPMGPGF*KGGVSP
Trigger: GGGTGAGACCCCTCCCTTCCAGAATCCAGGCCCCAT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCACACTGGGAGCTGCTaGCCCGGGCCTCCCCGGTCT +
Preference number: 2 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWHTGSC*PGPPRS
Trigger: AGACCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACCCAGCAAACGGGGGTaGGGGTGGAGGCCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPPSKRG*GWRPGS
Trigger: TGAGCCAGGCCTCCACCCCCACCCCCGTTTGCTGGG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 2 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAACGGCCAGAGCCAGGTaGCAGGGGGCCCTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGTARAR*QGALGL
Trigger: CAAACCCAGGGCCCCCTGGCACCTGGCTCTGGCCGT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTCACACTGGGAGCTGCTaGCCCGGGCCTCCCCGGTCT +
Preference number: 2 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRHTGSC*PGPPRS
Trigger: AGACCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTG...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCACACTGGGAGCTGCTaGCCCGGGCCTCCCCGGTCT +
Preference number: 2 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWHTGSC*PGPPRS
Trigger: AGACCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCCAGGCCTCTTCCCATaGGGGCGGCTGGAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSPGLFP*GRLEEP
Trigger: GGGCTCCTCCAGCCGCCCCCATGGGAAGAGGCCTGG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGGAGGGCTTCCAGCCTaGGGCCGGGGTGGGAGACTG +
Preference number: 2 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWGGLPA*GRGGRL
Trigger: CAGTCTCCCACCCCGGCCCCAGGCTGGAAGCCCTCC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATTTGTCAGGTCACACTaGGAGCTGCTGGCCCGGGCC +
Preference number: 2 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAFVRSH*ELLARA
Trigger: GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCCTGGGTTTGAGGGGTaGCTAAGCCCCGCCTGCGGG +
Preference number: 2 (lower is better)
Translates to: RKRRRKGARVRKVGASGQPGFEG*LSPACG
Trigger: CCCGCAGGCGGGGCTTAGCCACCCCTCAAACCCAGG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGGTTCTGTCTCAGGTTaGGGGCGGGTCTGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPGSVSG*GRVWSQ
Trigger: CTGGCTCCAGACCCGCCCCCAACCTGAGACAGAACC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACCAGGTGGGGAATACATaGGGAGGGGGCGGAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDQVGNT*GGGGGP
Trigger: GGGCCCTCCGCCCCCTCCCCATGTATTCCCCACCTG...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGTCCTGGACTTGCCTTaGGGCTCGGGAGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDVLDLP*GSGGAV
Trigger: CACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGAC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGTCCTGGACTTGCCTTaGGGCTCGGGAGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWVLDLP*GSGGAV
Trigger: CACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGAC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTCTGAGTCCTGGACTTaGCTTGAGGCTCGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SLPLRVFVRSHWELLARASESWT*LEAREG
Trigger: CCCCTCCCGAGCCTCAAGGCAAGTCCAGGACTCAGA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCCTGCAGGCTGGATGTaGGTGTGGAGCCGGGGTCCA +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSPAGWM*VWSRGP
Trigger: TGGACCCCGGCTCCACACCCACATCCAGCCTGCAGG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCTCCCAGCACGACGGGTaGCTTGGTCCTAGAGAGGGG +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSSQHDG*LGPREG
Trigger: CCCCTCTCTAGGACCAAGTCACCCGTCGTGCTGGGA...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTCTGAGTCCTGGACTTaGCTTGAGGCTCGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWSESWT*LEAREG
Trigger: CCCCTCCCGAGCCTCAAGGCAAGTCCAGGACTCAGA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTAGGAGCCAGGTGGGCCTaGTCACACGGACCCCCACAG +
Preference number: 2 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLGARWA*SHGPPQ
Trigger: CTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCC...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCCTCACGTTGCTGCTaGTCTGCCCAGGCTCCCCGA +
Preference number: 2 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSPSRCC*SAQAPR
Trigger: TCGGGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCAGCGACCCTCACGTTaGTGCTGCTCTGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSQRPSR*CCSAQA
Trigger: AGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAATGGGGCCTGGATTCTaGAAGGGAGGGGTCTCACCC +
Preference number: 2 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGMGPGF*KGGVSP
Trigger: GGGTGAGACCCCTCCCTTCCAGAATCCAGGCCCCAT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCCCCGGTCTGAGTCCTaGACTTGCCTTGAGGCTCGG +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSPRSES*TCLEAR
Trigger: CCGAGCCTCAAGGCAAGTCCAGGACTCAGACCGGGG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCTTTGTCAGGTCACACTaGGAGCTGCTGGCCCGGGCC +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSFVRSH*ELLARA
Trigger: GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAA...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTTTGTCAGGTCACACTaGGAGCTGCTGGCCCGGGCC +
Preference number: 2 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWFVRSH*ELLARA
Trigger: GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGAAAGTGGGGGCCTCTaGCCAGAAAACACGGCCAGA +
Preference number: 2 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRESGGL*PENTAR
Trigger: TCTGGCCGTGTTTTCTGGCCAGAGGCCCCCACTTTC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGGGGGCTGTTTCTTCTaGGGATGGAGGCACAGTTCC +
Preference number: 2 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPGGCFF*GWRHSS
Trigger: GGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTGTGGGGGTGGAGGCCTaGCTCAGCCTGGTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRVGVEA*LSLVLS
Trigger: AGACAGAACCAGGCTGAGCCAGGCCTCCACCCCCAC...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCAGGGGAACCGGAGGTaGGTGGGCCCTGTCCACAGT +
Preference number: 2 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSQGNRR*VGPVHS
Trigger: ACTGTGGACAGGGCCCACCCACCTCCGGTTCCCCTG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTAGAACCCTGCGGCGGTaGTCCTCTCCATCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRRTLRR*SSPSLQ
Trigger: CTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTCTGAGTCCTGGACTTaGCTTGAGGCTCGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: RKRRRKGARVRKVGASGQSESWT*LEAREG
Trigger: CCCCTCCCGAGCCTCAAGGCAAGTCCAGGACTCAGA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 2 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACGACCCTCACGTTGCTaGTGCTCTGCCCAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLRPSRC*CSAQAP
Trigger: GGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACACACAGTGAGGGCACATaGCCAGCGCCCCTGCAGGGC +
Preference number: 2 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTHSEGT*PAPLQG
Trigger: GCCCTGCAGGGGCGCTGGGCATGTGCCCTCACTGTG...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTATGGGGCCTGGATTCTaGAAGGGAGGGGTCTCACCC +
Preference number: 2 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRMGPGF*KGGVSP
Trigger: GGGTGAGACCCCTCCCTTCCAGAATCCAGGCCCCAT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTCCGTGTCCTCTACTaGTCCAAGACCAGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLRVLY*SKTRGC
Trigger: ACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACTCCGTGTCCTCTACTaGTCCAAGACCAGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: GGCFFWGWRHSSSTQARALRVLY*SKTRGC
Trigger: ACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGGGGGCTGTTTCTTCTaGGGATGGAGGCACAGTTCC +
Preference number: 2 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASGGCFF*GWRHSS
Trigger: GGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCTGCAGAAGCGCACCTaGCACAGACCTCTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSLQKRT*HRPLWV
Trigger: CACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTAGGAACCGGAGGTGGGTaGGCCCTGTCCACAGTGAGG +
Preference number: 2 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLGTGGG*ALSTVR
Trigger: CCTCACTGTGGACAGGGCCCACCCACCTCCGGTTCC...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGTCCTGGACTTGCCTTaGGGCTCGGGAGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAVLDLP*GSGGAV
Trigger: CACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGAC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR TCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTATCCAGGCAGCCCCCTTaGAGACGTGGACAATGGGCC +
Preference number: 2 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLSRQPP*RRGQWA
Trigger: GGCCCATTGTCCACGTCTTCAAGGGGGCTGCCTGGA...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 2 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACAGCGACCCTCACGTTaGTGCTGCTCTGCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLQRPSR*CCSAQA
Trigger: AGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGAAAGTGGGGGCCTCTaGCCAGAAAACACGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDESGGL*PENTAR
Trigger: TCTGGCCGTGTTTTCTGGCCAGAGGCCCCCACTTTC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGTTTCTTCTGGGGATaGAGGCACAGTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPCFFWG*RHSSST
Trigger: GGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGCCTCTCAGGAGGGGTaGCTTGTGAGGGGTGTATGT +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSASQEG*LVRGVC
Trigger: ACATACACCCCTCACAAGCCACCCCTCCTGAGAGGC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGCCCCCTTGAAGACGTaGACAATGGGCCTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWAPLKT*TMGLEG
Trigger: TCCTTCCAGGCCCATTGTCCACGTCTTCAAGGGGGC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTTTGTCAGGTCACACTaGGAGCTGCTGGCCCGGGCC +
Preference number: 2 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAFVRSH*ELLARA
Trigger: GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACACGAGTTAGGAAAGTaGGGGCCTCTGGCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGHELGK*GPLARK
Trigger: TTTTCTGGCCAGAGGCCCCCACTTTCCTAACTCGTG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCACGAGTTAGGAAAGTaGGGGCCTCTGGCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWHELGK*GPLARK
Trigger: TTTTCTGGCCAGAGGCCCCCACTTTCCTAACTCGTG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGGGTGGGAGCTGGGGTaGAGAGTTCTTTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSGWELG*RVLSSQ
Trigger: CTGTGAAGAAAGAACTCTCCACCCCAGCTCCCACCC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTGGGTGGGAGCTGGGGTaGAGAGTTCTTTCTTCACAG +
Preference number: 2 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRGWELG*RVLSSQ
Trigger: CTGTGAAGAAAGAACTCTCCACCCCAGCTCCCACCC...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGGCAGGAGAATCACTTaGACCTGGGAGGCAAAGGTT +
Preference number: 2 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWGRRIT*TWEAKV
Trigger: AACCTTTGCCTCCCAGGTTCAAGTGATTCTCCTGCC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACATCTGAGTCCTGGACTTaGCTTGAGGCTCGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTSESWT*LEAREG
Trigger: CCCCTCCCGAGCCTCAAGGCAAGTCCAGGACTCAGA...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCATGGGGCCTGGATTCTaGAAGGGAGGGGTCTCACCC +
Preference number: 2 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAMGPGF*KGGVSP
Trigger: GGGTGAGACCCCTCCCTTCCAGAATCCAGGCCCCAT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTTGTTTCTTCTGGGGATaGAGGCACAGTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRCFFWG*RHSSST
Trigger: GGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACTGTTTCTTCTGGGGATaGAGGCACAGTTCCTCCACC +
Preference number: 2 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDCFFWG*RHSSST
Trigger: GGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACAGGTAAAAGAACCCTaGGGCGGTGGTCCTCTCCAT +
Preference number: 2 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLQVKEP*GGGPLH
Trigger: ATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGAGCCGGGGTCCAGCCTaGCCTTCCCCTGGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVESRGPA*PSPGLP
Trigger: CGGGAGCCCAGGGGAAGGCCAGGCTGGACCCCGGCT...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACACTCCGTGTCCTCTACTaGTCCAAGACCAGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTLRVLY*SKTRGC
Trigger: ACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAG...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCTCCGTGTCCTCTACTaGTCCAAGACCAGGGGTTGT +
Preference number: 2 (lower is better)
Translates to: FTVRKRRRKGARVRKVGALRVLY*SKTRGC
Trigger: ACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACACGAGTTAGGAAAGTaGGGGCCTCTGGCCAGAAAA +
Preference number: 2 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLHELGK*GPLARK
Trigger: TTTTCTGGCCAGAGGCCCCCACTTTCCTAACTCGTG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCCAGGCCTCTTCCCATaGGGGCGGCTGGAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEPGLFP*GRLEEP
Trigger: GGGCTCCTCCAGCCGCCCCCATGGGAAGAGGCCTGG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGATGTGCACAGGGGTCTaGGGCGGCGGGAGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEMCTGV*GGGRGS
Trigger: AGAGCCCCTCCCGCCGCCTCAGACCCCTGTGCACAT...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTACGGCCAGAGCCAGGTaGCAGGGGGCCCTGGGTTTG +
Preference number: 2 (lower is better)
Translates to: QISCLAPTLWQELGFQTSTARAR*QGALGL
Trigger: CAAACCCAGGGCCCCCTGGCACCTGGCTCTGGCCGT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTCCTGGGTTTGAGGGGTaGCTAAGCCCCGCCTGCGGG +
Preference number: 2 (lower is better)
Translates to: QISCLAPTLWQELGFQTSPGFEG*LSPACG
Trigger: CCCGCAGGCGGGGCTTAGCCACCCCTCAAACCCAGG...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGTGGGGGTGGAGGCCTaGCTCAGCCTGGTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQVGVEA*LSLVLS
Trigger: AGACAGAACCAGGCTGAGCCAGGCCTCCACCCCCAC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCCCAGCAAACGGGGGTaGGGGTGGAGGCCTGGCTCA +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEPSKRG*GWRPGS
Trigger: TGAGCCAGGCCTCCACCCCCACCCCCGTTTGCTGGG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGACAGACCTCTGTGGGTaGGGCGGTACCAGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQTDLCG*GGTRPL
Trigger: AAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGT...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGAGCTTGGCTCCACCTaGAGAAGCGCACCTGGCACA +
Preference number: 2 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQELGST*RSAPGT
Trigger: TGTGCCAGGTGCGCTTCTGCAGGTGGAGCCAAGCTC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCGTTTAATATTTCTGTaGTGGTCAAACGGAACACAG +
Preference number: 2 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSRLIFL*WSNGTQ
Trigger: CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCATGCCCAGCGCCCCTaGAGGGCTGCTCATTCCATC +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEHAQRP*RAAHSI
Trigger: GATGGAATGAGCAGCCCTGCAGGGGCGCTGGGCATG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTGGTTCTGTCTCAGGTTaGGGGCGGGTCTGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: QISCLAPTLWQELGFQTSGSVSG*GRVWSQ
Trigger: CTGGCTCCAGACCCGCCCCCAACCTGAGACAGAACC...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGCCTCTCAGGAGGGGTaGCTTGTGAGGGGTGTATGT +
Preference number: 2 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQASQEG*LVRGVC
Trigger: ACATACACCCCTCACAAGCCACCCCTCCTGAGAGGC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGGACTGCAGAGAGGCCTaGAGGCTGGATGTGGGTGTG +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEDCREA*RLDVGV
Trigger: CACACCCACATCCAGCCTGCAGGCCTCTCTGCAGTC...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 2 (lower is better)
Translates to: QISCLAPTLWQELGFQTSGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCCTACTGCTTCAGGATaGCACCACCACACCTGGGCA +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEPTASG*HHHTWA
Trigger: TGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CAA 90 bp CCCTGCAGCAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTaGGATTTCAAACTAGTGAAAGAACTAGGGCAAAGGATTGGGACT +
Preference number: 2 (lower is better)
Translates to: PCSKSAALLQHSGKN*DFKLVKELGQRIGT
Trigger: AGTCCCAATCCTTTGCCCTAGTTCTTTCACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR TCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCCCCTTTGTATAGGTTaGATGATCCCGTTTCCGCCG +
Preference number: 2 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEPLCIG*MIPFPP
Trigger: CGGCGGAAACGGGATCATTCAACCTATACAAAGGGG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 72 bp GGAAGGGACAGGAGGCACAGGGGAACCGGAGGTGGGTaGGCCCTGTCCACAGTGAGGGCACATGCCCAGCGC +
Preference number: 3 (lower is better)
Translates to: GRDRRHRGTGGG*ALSTVRAHAQR
Trigger: GCGCTGGGCATGTGCCCTCACTGTGGACAGGGCCCACCCACCTCCGGTTCCCCTGTGCCTCCTGTCCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp TCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTaGTCACACGGACCCCCACAGGGCACACAGACAGTC +
Preference number: 3 (lower is better)
Translates to: SQVGGGSGARWA*SHGPPQGTQTV
Trigger: GACTGTCTGTGTGCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR CCA 72 bp GCGTGGAAGGGACAGGAGGCACAGGGGAACCGGAGGTaGGTGGGCCCTGTCCACAGTGAGGGCACATGCCCA +
Preference number: 3 (lower is better)
Translates to: AWKGQEAQGNRR*VGPVHSEGTCP
Trigger: TGGGCATGTGCCCTCACTGTGGACAGGGCCCACCCACCTCCGGTTCCCCTGTGCCTCCTGTCCCTTCCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR TCA 72 bp ACCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTaGGGCGGTACCAGGCCTCTTCCCATGGGGGCGGCT +
Preference number: 3 (lower is better)
Translates to: TCRSAPGTDLCG*GGTRPLPMGAA
Trigger: AGCCGCCCCCATGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR CCA 72 bp CAGTCCCACCCCAGCAGCAGAGGGGGCTGTTTCTTCTaGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGG +
Preference number: 3 (lower is better)
Translates to: QSHPSSRGGCFF*GWRHSSSTQAR
Trigger: CCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCCTCTGCTGCTGGGGTGGGACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CAA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPSPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: SLPLRVFVRSHWELLARASPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTCGATACGCCCAGTCCTaGGCCTTGAGTTGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASRYAQS*ALSWGS
Trigger: GGACCCCCAACTCAAGGCCAAGGACTGGGCGTATCG...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTACAGCGACCCTCACGTaGCTGCTGCTCTGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRTATLT*LLLCPG
Trigger: GCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTGT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSSPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: RKRRRKGARVRKVGASGQSPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR-3UTR CAA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGCCCAGTCCTTGGCCTaGAGTTGGGGGTCCCCCATA +
Preference number: 3 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSAQSLA*SWGSPI
Trigger: TATGGGGGACCCCCAACTCAAGGCCAAGGACTGGGC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTACTCTTCCCTGGGCCTaGTCCCTAGGGACAGGCCTG +
Preference number: 3 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRTLPWA*SLGTGL
Trigger: CAGGCCTGTCCCTAGGGACAAGGCCCAGGGAAGAGT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp TCACAGAAACCACCACCACAGCGACCCTCACGTTGCTaGTGCTCTGCCCAGGCTCCCCGAGCAGAGCGATCT +
Preference number: 3 (lower is better)
Translates to: SQKPPPQRPSRC*CSAQAPRAERS
Trigger: AGATCGCTCTGCTCGGGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTGTGGTGGTGGTTTCTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGCCCCTACGTGTTTTaGTCAGGTCACACTGGGAGC +
Preference number: 3 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPCPYVF*SGHTGS
Trigger: GCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR CCA 72 bp GGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTaGCCCTTGGCCTCTTTCCTTGCAGCCTATCCAGGG +
Preference number: 3 (lower is better)
Translates to: GEVSGAIFGLAA*PLASFLAAYPG
Trigger: CCCTGGATAGGCTGCAAGGAAAGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAGTCCTTGGCCTTGAGTaGGGGGTCCCCCATAGGGGG +
Preference number: 3 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTVLGLE*GVPHRG
Trigger: CCCCCTATGGGGGACCCCCAACTCAAGGCCAAGGAC...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACGATACGCCCAGTCCTaGGCCTTGAGTTGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLRYAQS*ALSWGS
Trigger: GGACCCCCAACTCAAGGCCAAGGACTGGGCGTATCG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR TCA 72 bp CACTACACACACACACGCCTATCCAGGCAGCCCCCTTaGAGACGTGGACAATGGGCCTGGAAGGACACCTGG +
Preference number: 3 (lower is better)
Translates to: HYTHTRLSRQPP*RRGQWAWKDTW
Trigger: CCAGGTGTCCTTCCAGGCCCATTGTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp GTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCTaGAGCAAATCAGCTGCCTTGCTCCAACACTCTGGC +
Preference number: 3 (lower is better)
Translates to: VKEPCGGGPLHP*SKSAALLQHSG
Trigger: GCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCTTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 72 bp AGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTaGTCCTCTCCATCCCTGCAGCAAATCAGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: RAGGTGKRTLRR*SSPSLQQISCL
Trigger: AAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 72 bp AATGGTCCTACTGCTTCAGGATGCCACCACCACACCTaGGCACTACACACACACACGCCTATCCAGGCAGCC +
Preference number: 3 (lower is better)
Translates to: NGPTASGCHHHT*ALHTHTPIQAA
Trigger: GGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTTCCCCTTTGTATAGGTaGAATGATCCCGTTTCCGCC +
Preference number: 3 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRSPLYR*NDPVSA
Trigger: GGCGGAAACGGGATCATTCAACCTATACAAAGGGGA...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp ATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTaGGGCGGTGGTCCTCTCCATCCCTGCAGCAAATCA +
Preference number: 3 (lower is better)
Translates to: MSPELVAQVKEP*GGGPLHPCSKS
Trigger: TGATTTGCTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp CGGCGGTGGTCCTCTCCATCCCTGCAGCAAATCAGCTaGCTTGCTCCAACACTCTGGCAAGAACTTGGATTT +
Preference number: 3 (lower is better)
Translates to: RRWSSPSLQQIS*LAPTLWQELGF
Trigger: AAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACCGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp ATGACCATGGTCACCACACAGTGTGCCACGTGGGTGTaGACGCACACTAATGGTCCTACTGCTTCAGGATGC +
Preference number: 3 (lower is better)
Translates to: MTMVTTQCATWV*THTNGPTASGC
Trigger: GCATCCTGAAGCAGTAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGGTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 72 bp ACTATGATGACCATGGTCACCACACAGTGTGCCACGTaGGTGTGCACGCACACTAATGGTCCTACTGCTTCA +
Preference number: 3 (lower is better)
Translates to: TMMTMVTTQCAT*VCTHTNGPTAS
Trigger: TGAAGCAGTAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGGTCATCATAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR-3UTR CAA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCCTTGGCCTCTTTCCTaGCAGCCTATCCAGGGTCCC +
Preference number: 3 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEPWPLS*QPIQGP
Trigger: GGGACCCTGGATAGGCTGCAAGGAAAGAGGCCAAGG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR TCA 72 bp GGAGAGTTCCAGCAGTTTGGTGATTTGTGGGAAGGGTaGTTGACTCCAGTTCAGCTTTCTCAACACCCTCCC +
Preference number: 3 (lower is better)
Translates to: GEFQQFGDLWEG*LTPVQLSQHPP
Trigger: GGGAGGGTGTTGAGAAAGCTGAACTGGAGTCAATCACCCTTCCCACAAATCACCAAACTGCTGGAACTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR TCA 72 bp CTCCCAGCATTTGGCTGGAGAGTTCCAGCAGTTTGGTaGTTTGTGGGAAGGGTGATTGACTCCAGTTCAGCT +
Preference number: 3 (lower is better)
Translates to: LPAFGWRVPAVW*FVGRVIDSSSA
Trigger: AGCTGAACTGGAGTCAATCACCCTTCCCACAAATCACCAAACTGCTGGAACTCTCCAGCCAAATGCTGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR TCA 72 bp GAGTGGATGAAGGTGAGACAGAGAAAGCGGGGCGAGTaGGCGACAGACAGAAATAGATGGACGAAAAGGACA +
Preference number: 3 (lower is better)
Translates to: EWMKVRQRKRGE*ATDRNRWTKRT
Trigger: TGTCCTTTTCGTCCATCTATTTCTGTCTGTCGCTCACTCGCCCCGCTTTCTCTGTCTCACCTTCATCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp GTGGTCCTCTCCATCCCTGCAGCAAATCAGCTGCCTTaGTCCAACACTCTGGCAAGAACTTGGATTTCAAAC +
Preference number: 3 (lower is better)
Translates to: VVLSIPAANQLP*SNTLARTWISN
Trigger: GTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR GCA 72 bp CAGGGCCCGGTGAATAGAGGACGTTTAATATTTCTGTaGTGGTCAAACGGAACACAGGTGGGGAATACATGG +
Preference number: 3 (lower is better)
Translates to: QGPVNRGRLIFL*WSNGTQVGNTW
Trigger: CCATGTATTCCCCACCTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CCA 72 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTaGTCAAACGGAACACAGGTGGGGAATACATGGGGA +
Preference number: 3 (lower is better)
Translates to: GPVNRGRLIFLC*SNGTQVGNTWG
Trigger: TCCCCATGTATTCCCCACCTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGGTCACACTGGGAGCTaGTGGCCCGGGCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGGHTGS*WPGPPR
Trigger: CCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTGACC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGCTGGGCCCCCACCATaGAGGGAGGCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGAGPPP*REAEPR
Trigger: CCTGGGCTCTGCCTCCCTGCATGGTGGGGGCCCAGC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCACACTGGGAGCTGCTaGCCCGGGCCTCCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGHTGSC*PGPPRS
Trigger: AGACCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCCACGTCATCGTGGCTaGGGGGCAGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGPRHRG*GAAGCW
Trigger: CCAGCAGCCTGCTGCCCCTCAGCCACGATGACGTGG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTGCTGGAGCAAGGCCTaGAGCTGCGGGGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGCWSKA*SCGGDR
Trigger: CCTGTCGCCCCCGCAGCTGCAGGCCTTGCTCCAGCA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGGAGCCAGGTGGGCCTaGTCACACGGACCCCCACAG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGGARWA*SHGPPQ
Trigger: CTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTGTCCGTACAGGGGGTaGGAGCCGGGGGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGCPYRG*EPGVSS
Trigger: CGAGGAGACCCCCGGCTCCCACCCCCTGTACGGACA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
3UTR CAA 72 bp CCCGGCCCAGGCCCCGCCTCTGGCCTCAGGGAGAGCTaGGCTCCACCTGCAGAAGCGCACCTGGCACAGACC +
Preference number: 4 (lower is better)
Translates to: PGPGPASGLRES*APPAEAHLAQT
Trigger: GGTCTGTGCCAGGTGCGCTTCTGCAGGTGGAGCCAAGCTCTCCCTGAGGCCAGAGGCGGGGCCTGGGCCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCTGCTGCCATCGGCTTaGCCAGAGAGGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGLLPSA*PERLPT
Trigger: CGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGCTGCTGCTGCCGTTaGTGGGCAGCGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGCCCR*WAAAPR
Trigger: CCGTGGAGCCGCTGCCCAGCAACGGCAGCAGCAGCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCAGGGGAGGCCCGGGCTaGCTGTCTTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGRGGPG*LSSSAS
Trigger: AGAGGCAGAGGAAGACAGGCAGCCCGGGCCTCCCCT...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGGCCGCATGTGCAGGTaGGCCATCATGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGGRMCR*AIMACS
Trigger: GCTGCAGGCCATGATGGCCCACCTGCACATGCGGCC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCCTGCAGGCTGGATGTaGGTGTGGAGCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGPAGWM*VWSRGP
Trigger: TGGACCCCGGCTCCACACCCACATCCAGCCTGCAGG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCAGGGGAACCGGAGGTaGGTGGGCCCTGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGQGNRR*VGPVHS
Trigger: ACTGTGGACAGGGCCCACCCACCTCCGGTTCCCCTG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTCCACACGGCACCCTTaGCGTTCTCCACGCGGACGA +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGSTRHP*RSPRGR
Trigger: TCGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGGCGGTCTCCGCTTCTaGTACTCCCGCTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGGGLRF*YSRSST
Trigger: TGTGGACGAGCGGGAGTATCAGAAGCGGAGACCGCC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCATGTGCACAGGGGTCTaGGGCGGCGGGAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPMCTGV*GGGRGS
Trigger: AGAGCCCCTCCCGCCGCCTCAGACCCCTGTGCACAT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTGGCCCCGCCGCTGCTaGCATCGGCTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPWPRRC*HRLAQR
Trigger: TCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCAGGCCTGAGGCCTGCTaGAGCAGGAACTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPRPEAC*SRNCRA
Trigger: GGCCCGGCAGTTCCTGCTGCAGCAGGCCTCAGGCCT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGGTTTCCCAGCCTGCTaGTGGGTGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGGFPAC*WVRSCR
Trigger: CCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAAACC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCACCAGCCCCTGCCTCTaGAGGTTGAGCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGTSPCL*RLSRCC
Trigger: GCAGCACCTGCTCAACCTGCAGAGGCAGGGGCTGGT...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGAGGAGGGCTGCTGCTaGCGTTGCTGGGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPEEGCC*RCWAAA
Trigger: AGCCGCTGCCCAGCAACGGCAGCAGCAGCCCTCCTC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCATGCCCAGCGCCCCTaGAGGGCTGCTCATTCCATC +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGHAQRP*RAAHSI
Trigger: GATGGAATGAGCAGCCCTGCAGGGGCGCTGGGCATG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGCCGCTCGCTCTCCTTaGCGAGCTGGATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGAARSP*RAGSPA
Trigger: AGCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCCTGGGTTTGAGGGGTaGCTAAGCCCCGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPPGFEG*LSPACG
Trigger: CCCGCAGGCGGGGCTTAGCCACCCCTCAAACCCAGG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGTGGGGGTGGAGGCCTaGCTCAGCCTGGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGVGVEA*LSLVLS
Trigger: AGACAGAACCAGGCTGAGCCAGGCCTCCACCCCCAC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCCCAGCAAACGGGGGTaGGGGTGGAGGCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPPSKRG*GWRPGS
Trigger: TGAGCCAGGCCTCCACCCCCACCCCCGTTTGCTGGG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
70% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTGGCACAGACCTCTGTaGGTGAGGCGGTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGWHRPL*VRRYQA
Trigger: GGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGTCACCTTGGAGAATaGGGAGGAGCCGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGHLGE*GGAGDR
Trigger: CCGGTCCCCGGCTCCTCCTCATTCTCCAAGGTGACC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR TCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCACAGACCTCTGTGGGTaGGGCGGTACCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGTDLCG*GGTRPL
Trigger: AAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGT...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCTTGCCCAGAGAGGCTaGCCACGCCATTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGLAQRG*PRHSDQ
Trigger: CTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGCAAG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCTGCTGCCATCGGCTTaGCCAGAGAGGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPLLPSA*PERLPT
Trigger: CGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCCGTGGTCACTTCCCTaGCCGTGCCACTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGPWSLP*PCHLQL
Trigger: CAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGGCTGCTGCTGCCGTTaGTGGGCAGCGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLGCCCR*WAAAPR
Trigger: CCGTGGAGCCGCTGCCCAGCAACGGCAGCAGCAGCC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTCTGAGTCCTGGACTTaGCTTGAGGCTCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGSESWT*LEAREG
Trigger: CCCCTCCCGAGCCTCAAGGCAAGTCCAGGACTCAGA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGGTCACACTGGGAGCTaGTGGCCCGGGCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPGHTGS*WPGPPR
Trigger: CCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTGACC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGCCGCATGTGCAGGTaGGCCATCATGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGRMCR*AIMACS
Trigger: GCTGCAGGCCATGATGGCCCACCTGCACATGCGGCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTGCAGGCTGAGGTTGTaGCGCACGGCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGCRLRL*RTAFFQ
Trigger: CTGGAAGAACGCCGTGCGCCACAACCTCAGCCTGCA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAAGCCGGGGTCCAGCCTaGCCTTCCCCTGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPSRGPA*PSPGLP
Trigger: CGGGAGCCCAGGGGAAGGCCAGGCTGGACCCCGGCT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAGCCGGGGTCCAGCCTaGCCTTCCCCTGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARASRGPA*PSPGLP
Trigger: CGGGAGCCCAGGGGAAGGCCAGGCTGGACCCCGGCT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGGAGGGCTTCCAGCCTaGGGCCGGGGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLGGLPA*GRGGRL
Trigger: CAGTCTCCCACCCCGGCCCCAGGCTGGAAGCCCTCC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGAACCGGAGGTGGGTaGGCCCTGTCCACAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGTGGG*ALSTVR
Trigger: CCTCACTGTGGACAGGGCCCACCCACCTCCGGTTCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCATAAGAGGTGCAGGCTaGTGTGCTGGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGIRGAG*CAGAGG
Trigger: TCCCCCAGCCCCAGCACACCAGCCTGCACCTCTTAT...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGCGGTCTCCGCTTCTaGTACTCCCGCTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGGLRF*YSRSST
Trigger: TGTGGACGAGCGGGAGTATCAGAAGCGGAGACCGCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACTGTGGCCCCGCCGCTaGTGCCATCGGCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARALWPRR*CHRLAQ
Trigger: CTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCTGTGGCCCCGCCGCTaGTGCCATCGGCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRLWPRR*CHRLAQ
Trigger: CTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTCACTTCCCTGCCCGTaGCACTTGCAGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGSLPCP*HLQLSL
Trigger: CAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCAGGCCTGAGGCCTGCTaGAGCAGGAACTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLRPEAC*SRNCRA
Trigger: GGCCCGGCAGTTCCTGCTGCAGCAGGCCTCAGGCCT...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGGCAAACAGCTGCTTaGGGAAGGGTCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGQTAA*GRVWRG
Trigger: GCCCCTCCAGACCCTTCCGCAAGCAGCTGTTTGCCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGCTGGGCCCCCACCATaGAGGGAGGCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAAGPPP*REAEPR
Trigger: CCTGGGCTCTGCCTCCCTGCATGGTGGGGGCCCAGC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGCTGCTGCTGCCGTTaGTGGGCAGCGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGCCCR*WAAAPR
Trigger: CCGTGGAGCCGCTGCCCAGCAACGGCAGCAGCAGCC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGGTCACACTGGGAGCTaGTGGCCCGGGCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASGHTGS*WPGPPR
Trigger: CCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTGACC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGCCGCTCGCTCTCCTTaGCGAGCTGGATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPAARSP*RAGSPA
Trigger: AGCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCACCGGGTTCAGTGGCTaGCTGAAGGGCTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPTGFSG*LKGLGS
Trigger: GGAGCCCAAGCCCTTCAGCCAGCCACTGAACCCGGT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGCTGCTGCCGTTGCTaGGCAGCGGCTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPCCCRC*AAAPRG
Trigger: CCCCCGTGGAGCCGCTGCCCAGCAACGGCAGCAGCA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGCTGCTGCCGTTGCTaGGCAGCGGCTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARACCCRC*AAAPRG
Trigger: CCCCCGTGGAGCCGCTGCCCAGCAACGGCAGCAGCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTTCACCTGCACCTGGTaGCTGTACTGGGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPFTCTW*LYWGGE
Trigger: CTCCCCGCCCCAGTACAGCCACCAGGTGCAGGTGAA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTCCTTCACCTGCACCTaGTGGCTGTACTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPSFTCT*WLYWGG
Trigger: CCCGCCCCAGTACAGCCACCAGGTGCAGGTGAAGGA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTTTGTCAGGTCACACTaGGAGCTGCTGGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPFVRSH*ELLARA
Trigger: GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCCAGGCCTCTTCCCATaGGGGCGGCTGGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRPGLFP*GRLEEP
Trigger: GGGCTCCTCCAGCCGCCCCCATGGGAAGAGGCCTGG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTGGCACAGACCTCTGTaGGTGAGGCGGTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPWHRPL*VRRYQA
Trigger: GGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCCCAGGCCCCGCCTCTaGCCTCAGGGAGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAPRPRL*PQGELG
Trigger: GCCAAGCTCTCCCTGAGGCCAGAGGCGGGGCCTGGG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAAGCCGGGGTCCAGCCTaGCCTTCCCCTGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGSRGPA*PSPGLP
Trigger: CGGGAGCCCAGGGGAAGGCCAGGCTGGACCCCGGCT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGCCCCCTTGAAGACGTaGACAATGGGCCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGAPLKT*TMGLEG
Trigger: TCCTTCCAGGCCCATTGTCCACGTCTTCAAGGGGGC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCCAGATGGAGCCGACCTaGTTGTCTCCGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGQMEPT*LSPRQI
Trigger: AATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTG...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACCAGCCCCTCCTGCTTaGCGCTGTCCTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAPAPPA*RCPRQA
Trigger: AGCCTGCCGAGGACAGCGTCAAGCAGGAGGGGCTGG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACGGTCACTGGCTGGCTaGAGGGCTTGGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARARSLAG*RAWAPR
Trigger: CCTCGGAGCCCAAGCCCTTCAGCCAGCCAGTGACCG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCATCTGCTGCATCTGTTaGGGGGTAAGCATCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGICCIC*GVSICG
Trigger: GCCGCAGATGCTTACCCCGCAACAGATGCAGCAGAT...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGGGGCGACAGGATCTaGTGCATCTGTTGCGGGGTA +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGGDRI*CICCGV
Trigger: TACCCCGCAACAGATGCAGCAGATCCTGTCGCCCCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGCTGGAGCAAGGCCTaGAGCTGCGGGGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPCWSKA*SCGGDR
Trigger: CCTGTCGCCCCCGCAGCTGCAGGCCTTGCTCCAGCA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTCCGAGGGCCGCATGTaGAGGTGGGCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLSEGRM*RWAIMA
Trigger: GGCCATGATGGCCCACCTGCACATGCGGCCCTCGGA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGCTCCTCCTTCACCTaGACCTGGTGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGSSFT*TWWLYW
Trigger: CCAGTACAGCCACCAGGTGCAGGTGAAGGAGGAGCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCAGGGGAGGCCCGGGCTaGCTGTCTTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLRGGPG*LSSSAS
Trigger: AGAGGCAGAGGAAGACAGGCAGCCCGGGCCTCCCCT...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGGTCACACTGGGAGCTaGTGGCCCGGGCCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDGHTGS*WPGPPR
Trigger: CCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTGACC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCACAGTGAGGGCACATaGCCAGCGCCCCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAHSEGT*PAPLQG
Trigger: GCCCTGCAGGGGCGCTGGGCATGTGCCCTCACTGTG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGCTTGCGGAAGGGTCTaGAGGGGCCCCGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAACGRV*RGPEAW
Trigger: CCAAGCCTCGGGGCCCCTCCAGACCCTTCCGCAAGC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGTCCGTACAGGGGGTaGGAGCCGGGGGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPCPYRG*EPGVSS
Trigger: CGAGGAGACCCCCGGCTCCCACCCCCTGTACGGACA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCAGGGTCTCACAGCCTaGCCACTTGCACTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPQGLTA*PLALSV
Trigger: CACGGAGAGTGCAAGTGGCCAGGCTGTGAGACCCTG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGCTTCTCCGACGGGCTaGGCCCCCACCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRASPTG*APTMQG
Trigger: TCCCTGCATGGTGGGGGCCCAGCCCGTCGGAGAAGC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGCTTCTCCGACGGGCTaGGCCCCCACCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPASPTG*APTMQG
Trigger: TCCCTGCATGGTGGGGGCCCAGCCCGTCGGAGAAGC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACCAGGCCTCTTCCCATaGGGGCGGCTGGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGPGLFP*GRLEEP
Trigger: GGGCTCCTCCAGCCGCCCCCATGGGAAGAGGCCTGG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCTGCAGAAGCGCACCTaGCACAGACCTCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPLQKRT*HRPLWV
Trigger: CACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTAGCCGGGGTCCAGCCTaGCCTTCCCCTGGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRSRGPA*PSPGLP
Trigger: CGGGAGCCCAGGGGAAGGCCAGGCTGGACCCCGGCT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCAGGTGGGGAATACATaGGGAGGGGGCGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAQVGNT*GGGGGP
Trigger: GGGCCCTCCGCCCCCTCCCCATGTATTCCCCACCTG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCCAGGGGAACCGGAGGTaGGTGGGCCCTGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLQGNRR*VGPVHS
Trigger: ACTGTGGACAGGGCCCACCCACCTCCGGTTCCCCTG...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGTCACCTTGGAGAATaGGGAGGAGCCGGGGACCGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGHLGE*GGAGDR
Trigger: CCGGTCCCCGGCTCCTCCTCATTCTCCAAGGTGACC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR TCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCATTCTGGGCCAGCTCTaGGGAGATGGGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPILGQL*GDGGAE
Trigger: TTCTGCTCCCCCATCTCCTCAGAGCTGGCCCAGAAT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGGCGGTCTCCGCTTCTaGTACTCCCGCTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLGGLRF*YSRSST
Trigger: TGTGGACGAGCGGGAGTATCAGAAGCGGAGACCGCC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCCACGTCATCGTGGCTaGGGGGCAGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWPRHRG*GAAGCW
Trigger: CCAGCAGCCTGCTGCCCCTCAGCCACGATGACGTGG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGTCCTGGACTTGCCTTaGGGCTCGGGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAVLDLP*GSGGAV
Trigger: CACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGAC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCCACTCCTGAGGGGGTaGGAGCCCGCTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRPLLRG*EPAFSP
Trigger: AGGGGAGAAAGCGGGCTCTCACCCCCTCAGGAGTGG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACCACTCCTGAGGGGGTaGGAGCCCGCTTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAPLLRG*EPAFSP
Trigger: AGGGGAGAAAGCGGGCTCTCACCCCCTCAGGAGTGG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTGGCCCCGCCGCTGCTaGCATCGGCTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWWPRRC*HRLAQR
Trigger: TCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACCTGCCCGTGCCACTTaGAGTTGTCCCTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPPARAT*SCPCGP
Trigger: GGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCGAAGTGCAGCAGCTCTaGGGGACTCATCTCACCATT +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGEVQQL*GTHLTI
Trigger: AATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTC...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTGCTGCAGCAGGAACTaGCGGGCCACTTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLCCSRN*RATWRA
Trigger: GGCTCTCCAAGTGGCCCGGCAGTTCCTGCTGCAGCA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCTCAGGCCTGAGGCCTaGTGCAGCAGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARALRPEA*CSRNCR
Trigger: CCGGCAGTTCCTGCTGCAGCAGGCCTCAGGCCTGAG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACTCAGGCCTGAGGCCTaGTGCAGCAGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARALRPEA*CSRNCR
Trigger: CCGGCAGTTCCTGCTGCAGCAGGCCTCAGGCCTGAG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGGCGACAGGATCTGCTaGATCTGTTGCGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPGDRIC*ICCGVS
Trigger: GCTTACCCCGCAACAGATGCAGCAGATCCTGTCGCC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGCTGGAGCAAGGCCTaGAGCTGCGGGGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGCWSKA*SCGGDR
Trigger: CCTGTCGCCCCCGCAGCTGCAGGCCTTGCTCCAGCA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTGCATTTGCAGGAGCTaGTGCTGGAAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPCICRS*CWKASC
Trigger: GCAGCTGGCCTTCCAGCAGCAGCTCCTGCAAATGCA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGGGCAAACAGCTGCTTaGGGAAGGGTCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLGQTAA*GRVWRG
Trigger: GCCCCTCCAGACCCTTCCGCAAGCAGCTGTTTGCCC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGCTGGGCCCCCACCATaGAGGGAGGCAGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSAGPPP*REAEPR
Trigger: CCTGGGCTCTGCCTCCCTGCATGGTGGGGGCCCAGC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGAGGAGGGCTGCTGCTaGCGTTGCTGGGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASEEGCC*RCWAAA
Trigger: AGCCGCTGCCCAGCAACGGCAGCAGCAGCCCTCCTC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAGGGGAGGCCCGGGCTaGCTGTCTTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARARGGPG*LSSSAS
Trigger: AGAGGCAGAGGAAGACAGGCAGCCCGGGCCTCCCCT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGGAGCCAGGTGGGCCTaGTCACACGGACCCCCACAG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWGARWA*SHGPPQ
Trigger: CTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTGCAGTTGTCCCTGTaGCCCCGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLLQLSL*PRRCCH
Trigger: ATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCAGAGCCTGTTGCTGCTaGAAGTGCAGCAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPRACCC*KCSSSA
Trigger: CGCAGAGCTGCTGCACTTCCAGCAGCAACAGGCTCT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGCAGGTGGGCCATCATaGCCTGCAGCCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPAGGPS*PAAARS
Trigger: AGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGCAGGTGGGCCATCATaGCCTGCAGCCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAAGGPS*PAAARS
Trigger: AGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCCGCATGTGCAGGTaGGCCATCATGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAGRMCR*AIMACS
Trigger: GCTGCAGGCCATGATGGCCCACCTGCACATGCGGCC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGCTTCTCCGACGGGCTaGGCCCCCACCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWASPTG*APTMQG
Trigger: TCCCTGCATGGTGGGGGCCCAGCCCGTCGGAGAAGC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGCACCCACGTCATCGTaGCTGAGGGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAAPTSS*LRGSRL
Trigger: CAGCCTGCTGCCCCTCAGCCACGATGACGTGGGTGC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTGCTGCTGCCGTTGCTaGGCAGCGGCTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQCCCRC*AAAPRG
Trigger: CCCCCGTGGAGCCGCTGCCCAGCAACGGCAGCAGCA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCACACTGGGAGCTGCTaGCCCGGGCCTCCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWHTGSC*PGPPRS
Trigger: AGACCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCCTGGGTTTGAGGGGTaGCTAAGCCCCGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWPGFEG*LSPACG
Trigger: CCCGCAGGCGGGGCTTAGCCACCCCTCAAACCCAGG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACCCAGGCCTCTTCCCATaGGGGCGGCTGGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDPGLFP*GRLEEP
Trigger: GGGCTCCTCCAGCCGCCCCCATGGGAAGAGGCCTGG...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTCCCAGGCCCCGCCTCTaGCCTCAGGGAGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRPRPRL*PQGELG
Trigger: GCCAAGCTCTCCCTGAGGCCAGAGGCGGGGCCTGGG...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCCCAGGCCCCGCCTCTaGCCTCAGGGAGAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWPRPRL*PQGELG
Trigger: GCCAAGCTCTCCCTGAGGCCAGAGGCGGGGCCTGGG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACCTGCAGGCTGGATGTaGGTGTGGAGCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAPAGWM*VWSRGP
Trigger: TGGACCCCGGCTCCACACCCACATCCAGCCTGCAGG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGCCGGGGTGGGAGACTaGGAGGGCAGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSAGVGD*EGRCWG
Trigger: TCCCCAGCACCTGCCCTCCCAGTCTCCCACCCCGGC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCCAGCCCCTCCTGCTTaGCGCTGTCCTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQPAPPA*RCPRQA
Trigger: AGCCTGCCGAGGACAGCGTCAAGCAGGAGGGGCTGG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGAGACCATCTGGGAATaGGTCTGCTGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPETIWE*VCCRDG
Trigger: ACCGTCTCTGCAGCAGACTCATTCCCAGATGGTCTC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGCGGTCTCCGCTTCTaGTACTCCCGCTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGGLRF*YSRSST
Trigger: TGTGGACGAGCGGGAGTATCAGAAGCGGAGACCGCC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGTCCTGGACTTGCCTTaGGGCTCGGGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWVLDLP*GSGGAV
Trigger: CACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGAC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTCCCAGCACGACGGGTaGCTTGGTCCTAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARASQHDG*LGPREG
Trigger: CCCCTCTCTAGGACCAAGTCACCCGTCGTGCTGGGA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGATGTGCACAGGGGTCTaGGGCGGCGGGAGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWMCTGV*GGGRGS
Trigger: AGAGCCCCTCCCGCCGCCTCAGACCCCTGTGCACAT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTGGTGGGGAGACTCTaGGACCAAGCTGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLVGRL*DQAELP
Trigger: GGGGAGCTCAGCTTGGTCTCAGAGTCTCCCCACCAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGGCACTTTGTGGGCTaGTTGGCTCGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAWHFVG*LARSGS
Trigger: GGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTGGCCCCGCCGCTGCTaGCATCGGCTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWWPRRC*HRLAQR
Trigger: TCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCCTGCCCGTGCCACTTaGAGTTGTCCCTGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWPARAT*SCPCGP
Trigger: GGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCCCGTGGTCACTTCCCTaGCCGTGCCACTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLPWSLP*PCHLQL
Trigger: CAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGG...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCTCACCATTGCTGTCTaGACCCGTGGTCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPLTIAV*TRGHFP
Trigger: AGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTGGAGAGCCTGTTGCTaGTGGAAGTGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPWRACC*WKCSSS
Trigger: AGAGCTGCTGCACTTCCAGCAGCAACAGGCTCTCCA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGAGGCCTGAGGCCTGCTaGAGCAGGAACTGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWRPEAC*SRNCRA
Trigger: GGCCCGGCAGTTCCTGCTGCAGCAGGCCTCAGGCCT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACTCAGGCCTGAGGCCTaGTGCAGCAGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGLRPEA*CSRNCR
Trigger: CCGGCAGTTCCTGCTGCAGCAGGCCTCAGGCCTGAG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTGCGGGGTAAGCATCTaGGGCGACATCATGGCCACC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLCGVSI*GDIMAT
Trigger: GGTGGCCATGATGTCGCCGCAGATGCTTACCCCGCA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGGGGGCGACAGGATCTaGTGCATCTGTTGCGGGGTA +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLGGDRI*CICCGV
Trigger: TACCCCGCAACAGATGCAGCAGATCCTGTCGCCCCC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCATGAGGGCTTGCTGCTaGTGGAGCAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLMRACC*WSKACS
Trigger: GCTGCAGGCCTTGCTCCAGCAGCAGCAAGCCCTCAT...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGTTTCCCAGCCTGCTaGTGGGTGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGFPAC*WVRSCR
Trigger: CCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAAACC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGCGGTTTCCCAGCCTaGTGCTGGGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARACGFPA*CWVRSC
Trigger: GCAGCTCCTCACCCAGCAGCAGGCTGGGAAACCGCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTGCGGTTTCCCAGCCTaGTGCTGGGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRCGFPA*CWVRSC
Trigger: GCAGCTCCTCACCCAGCAGCAGGCTGGGAAACCGCA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGACCAGCCCCTGCCTCTaGAGGTTGAGCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRTSPCL*RLSRCC
Trigger: GCAGCACCTGCTCAACCTGCAGAGGCAGGGGCTGGT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGAGGCTGACCAGCCCCTaGCTCTGCAGGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRRLTSP*LCRLSR
Trigger: CCTGCTCAACCTGCAGAGGCAGGGGCTGGTCAGCCT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAAGGTCCAGCCCCTCCTaGTTGACGCTGTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPRSSPS*LTLSSA
Trigger: TGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGACCT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGGGCCATCATGGCCTaGAGCCGCTCGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAWAIMA*SRSLSL
Trigger: CAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATCCGAGGGCCGCATGTaGAGGTGGGCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGSEGRM*RWAIMA
Trigger: GGCCATGATGGCCCACCTGCACATGCGGCCCTCGGA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGAGGAGGGCTGCTGCTaGCGTTGCTGGGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQEEGCC*RCWAAA
Trigger: AGCCGCTGCCCAGCAACGGCAGCAGCAGCCCTCCTC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGACGGCCAGAGCCAGGTaGCAGGGGGCCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWTARAR*QGALGL
Trigger: CAAACCCAGGGCCCCCTGGCACCTGGCTCTGGCCGT...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGGAGCCAGGTGGGCCTaGTCACACGGACCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQGARWA*SHGPPQ
Trigger: CTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGACTGCAGAGAGGCCTaGAGGCTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLDCREA*RLDVGV
Trigger: CACACCCACATCCAGCCTGCAGGCCTCTCTGCAGTC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCACAGTGAGGGCACATaGCCAGCGCCCCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSHSEGT*PAPLQG
Trigger: GCCCTGCAGGGGCGCTGGGCATGTGCCCTCACTGTG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAACTTTGTGGGCTGCTTaGCTCGCTCCGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPTLWAA*LAPAPL
Trigger: GAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAACCCCGCCGGGGCATaGCACTTTGTGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARANPAGA*HFVGCL
Trigger: CAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTGCTGTCTGCACCCGTaGTCACTTCCCTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRCCLHP*SLPCPC
Trigger: GCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAGGGCTTGCTGCTGCTaGAGCAAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARARACCC*SKACSC
Trigger: GCAGCTGCAGGCCTTGCTCCAGCAGCAGCAAGCCCT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATTCCCAGCCTGCTGCTaGGTGAGGAGCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAFPACC*VRSCRW
Trigger: CCACCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGCTTGCGGAAGGGTCTaGAGGGGCCCCGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWACGRV*RGPEAW
Trigger: CCAAGCCTCGGGGCCCCTCCAGACCCTTCCGCAAGC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCCGGGGGTCTCCTCGTaGGAAGAGCTGTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAPGVSS*EELSLR
Trigger: TCGGAGAGACAGCTCTTCCCACGAGGAGACCCCCGG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACCGGGGGTCTCCTCGTaGGAAGAGCTGTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPPGVSS*EELSLR
Trigger: TCGGAGAGACAGCTCTTCCCACGAGGAGACCCCCGG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCCGGGGGTCTCCTCGTaGGAAGAGCTGTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRPGVSS*EELSLR
Trigger: TCGGAGAGACAGCTCTTCCCACGAGGAGACCCCCGG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTGTCCGTACAGGGGGTaGGAGCCGGGGGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWCPYRG*EPGVSS
Trigger: CGAGGAGACCCCCGGCTCCCACCCCCTGTACGGACA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCCTCTCCTTGGCGAGCTaGATCTCCAGCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLLSLAS*ISSCCT
Trigger: GGTGCAGCAGCTGGAGATCCAGCTCGCCAAGGAGAG...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGCAGGTGGGCCATCATaGCCTGCAGCCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGAGGPS*PAAARS
Trigger: AGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGGGGACCGGGTTCAGTaGCTGGCTGAAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGGDRVQ*LAEGLG
Trigger: CCCAAGCCCTTCAGCCAGCCACTGAACCCGGTCCCC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGCTTCTCCGACGGGCTaGGCCCCCACCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWASPTG*APTMQG
Trigger: TCCCTGCATGGTGGGGGCCCAGCCCGTCGGAGAAGC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTGCAGGCTGAGGTTGTaGCGCACGGCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLCRLRL*RTAFFQ
Trigger: CTGGAAGAACGCCGTGCGCCACAACCTCAGCCTGCA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTCCTTCACCTGCACCTaGTGGCTGTACTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARASFTCT*WLYWGG
Trigger: CCCGCCCCAGTACAGCCACCAGGTGCAGGTGAAGGA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACCCCGGTCTGAGTCCTaGACTTGCCTTGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAPRSES*TCLEAR
Trigger: CCGAGCCTCAAGGCAAGTCCAGGACTCAGACCGGGG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACCCCGGTCTGAGTCCTaGACTTGCCTTGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPPRSES*TCLEAR
Trigger: CCGAGCCTCAAGGCAAGTCCAGGACTCAGACCGGGG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTTTGTCAGGTCACACTaGGAGCTGCTGGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRFVRSH*ELLARA
Trigger: GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCCTGGGTTTGAGGGGTaGCTAAGCCCCGCCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWPGFEG*LSPACG
Trigger: CCCGCAGGCGGGGCTTAGCCACCCCTCAAACCCAGG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGGTTCTGTCTCAGGTTaGGGGCGGGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRGSVSG*GRVWSQ
Trigger: CTGGCTCCAGACCCGCCCCCAACCTGAGACAGAACC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGGGTGGAGGCCTaGCTCAGCCTGGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRVGVEA*LSLVLS
Trigger: AGACAGAACCAGGCTGAGCCAGGCCTCCACCCCCAC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCAGGCCTCTTCCCATaGGGGCGGCTGGAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSPGLFP*GRLEEP
Trigger: GGGCTCCTCCAGCCGCCCCCATGGGAAGAGGCCTGG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGGCACAGACCTCTGTaGGTGAGGCGGTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPWHRPL*VRRYQA
Trigger: GGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTGCAGGCTGGTGTGCTaGGGCTGGGGGAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWCRLVC*GWGRCQ
Trigger: CTGACACCTCCCCCAGCCCCAGCACACCAGCCTGCA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGAGACGGCTGAGGCCCTaGGGATGTGCACAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRRRLRP*GCAQGS
Trigger: AGACCCCTGTGCACATCCCCAGGGCCTCAGCCGTCT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCAGCCCCTCCTGCTTaGCGCTGTCCTCGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSPAPPA*RCPRQA
Trigger: AGCCTGCCGAGGACAGCGTCAAGCAGGAGGGGCTGG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGGTTCAGTGGCTGGCTaGAGGGCTTGGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWGSVAG*RAWAPR
Trigger: CCTCGGAGCCCAAGCCCTTCAGCCAGCCACTGAACC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR TCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCATTCTGGGCCAGCTCTaGGGAGATGGGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLILGQL*GDGGAE
Trigger: TTCTGCTCCCCCATCTCCTCAGAGCTGGCCCAGAAT...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTCCACACGGCACCCTTaGCGTTCTCCACGCGGACGA +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWSTRHP*RSPRGR
Trigger: TCGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAACAGACCTCTGTGGGTaGGGCGGTACCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPTDLCG*GGTRPL
Trigger: AAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGACAGACCTCTGTGGGTaGGGCGGTACCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRTDLCG*GGTRPL
Trigger: AAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTGTTGCTGCTGGAAGTaGAGCAGCTCTGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLCCCWK*SSSAGL
Trigger: GAGTCCCGCAGAGCTGCTGCACTTCCAGCAGCAACA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTGCGGGGTAAGCATCTaGGGCGACATCATGGCCACC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRCGVSI*GDIMAT
Trigger: GGTGGCCATGATGTCGCCGCAGATGCTTACCCCGCA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGGGGCGACAGGATCTaGTGCATCTGTTGCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGGDRI*CICCGV
Trigger: TACCCCGCAACAGATGCAGCAGATCCTGTCGCCCCC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAGCATGAGGGCTTGCTaGTGCTGGAGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARASMRAC*CWSKAC
Trigger: GCAGGCCTTGCTCCAGCAGCAGCAAGCCCTCATGCT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGGTTTCCCAGCCTGCTaGTGGGTGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWGFPAC*WVRSCR
Trigger: CCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAAACC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAAGGCTGACCAGCCCCTaGCTCTGCAGGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGRLTSP*LCRLSR
Trigger: CCTGCTCAACCTGCAGAGGCAGGGGCTGGTCAGCCT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAGCTGCTGCACCACCTaGATCTGTACCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARASCCTT*ICTRHW
Trigger: CCAGTGCCGGGTACAGATGCAGGTGGTGCAGCAGCT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAAGCTGCTGCACCACCTaGATCTGTACCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPSCCTT*ICTRHW
Trigger: CCAGTGCCGGGTACAGATGCAGGTGGTGCAGCAGCT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTGGGCCATCATGGCCTaGAGCCGCTCGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWWAIMA*SRSLSL
Trigger: CAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGGGCCATCATGGCCTaGAGCCGCTCGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGWAIMA*SRSLSL
Trigger: CAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTCCGAGGGCCGCATGTaGAGGTGGGCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWSEGRM*RWAIMA
Trigger: GGCCATGATGGCCCACCTGCACATGCGGCCCTCGGA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGCTCCTCCTTCACCTaGACCTGGTGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGSSFT*TWWLYW
Trigger: CCAGTACAGCCACCAGGTGCAGGTGAAGGAGGAGCC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGAGCTTGGCTCCACCTaGAGAAGCGCACCTGGCACA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPELGST*RSAPGT
Trigger: TGTGCCAGGTGCGCTTCTGCAGGTGGAGCCAAGCTC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGAGCTTGGCTCCACCTaGAGAAGCGCACCTGGCACA +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRELGST*RSAPGT
Trigger: TGTGCCAGGTGCGCTTCTGCAGGTGGAGCCAAGCTC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGAGCTTGGCTCCACCTaGAGAAGCGCACCTGGCACA +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAELGST*RSAPGT
Trigger: TGTGCCAGGTGCGCTTCTGCAGGTGGAGCCAAGCTC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGACTGCAGAGAGGCCTaGAGGCTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARADCREA*RLDVGV
Trigger: CACACCCACATCCAGCCTGCAGGCCTCTCTGCAGTC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGACTGCAGAGAGGCCTaGAGGCTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPDCREA*RLDVGV
Trigger: CACACCCACATCCAGCCTGCAGGCCTCTCTGCAGTC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCCCTCACGTTGCTGCTaGTCTGCCCAGGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQPSRCC*SAQAPR
Trigger: TCGGGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCCGACCCTCACGTTGCTaGTGCTCTGCCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSRPSRC*CSAQAP
Trigger: GGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCG...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGTTGGGCAAACAGCTTaGGGAAGGGTCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPVGQTA*GRVWRG
Trigger: GCCCCTCCAGACCCTTCCGCAAGCTGTTTGCCCAAC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373063.7
CDS-3UTR CCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGGGCATGGCACTTTGTaGGCTGCTTGGCTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASGHGTL*AAWLAP
Trigger: CGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGCCATTCTGACCAGATaGAGCCGACCTGATTGTCTC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPAILTR*SRPDCL
Trigger: GAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGAACTGCCGGGCCACTTaGAGAGCCTGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRNCRAT*RACCCW
Trigger: CCAGCAGCAACAGGCTCTCCAAGTGGCCCGGCAGTT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTAGGGCTTGCTGCTGCTaGAGCAAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASRACCC*SKACSC
Trigger: GCAGCTGCAGGCCTTGCTCCAGCAGCAGCAAGCCCT...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAAGGGCTTGCTGCTGCTaGAGCAAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGRACCC*SKACSC
Trigger: GCAGCTGCAGGCCTTGCTCCAGCAGCAGCAAGCCCT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTGGGGCAGGTCTGTTaGGCAAACAGCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLGQVC*ANSCLR
Trigger: CCGCAAGCAGCTGTTTGCCCAACAGACCTGCCCCAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACAGGGTCTCACAGCCTaGCCACTTGCACTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPQGLTA*PLALSV
Trigger: CACGGAGAGTGCAAGTGGCCAGGCTGTGAGACCCTG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCAGGTGTTTGATAAACTaGCCCAGGTCTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: VGGGSGARWACSHGPPQGRCLIN*PRSSHR
Trigger: CCTGTGTGAAGACCTGGGCCAGTTTATCAAACACCT...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGCCGCTCGCTCTCCTTaGCGAGCTGGATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGAARSP*RAGSPA
Trigger: AGCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGCAGGTGGGCCATCATaGCCTGCAGCCGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSAGGPS*PAAARS
Trigger: AGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCCAGAGACGGTCACCTTaGAGAATGAGGAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLQRRSP*RMRRSR
Trigger: CCGGCTCCTCCTCATTCTCCAAGGTGACCGTCTCTG...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCGGCGTTCTTCCAGGTaGCAGTGTTTCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPRRSSR*QCFCGN
Trigger: ATTTCCGCAGAAACACTGCCACCTGGAAGAACGCCG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTGCAGGCTGAGGTTGTaGCGCACGGCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRCRLRL*RTAFFQ
Trigger: CTGGAAGAACGCCGTGCGCCACAACCTCAGCCTGCA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGCACCCACGTCATCGTaGCTGAGGGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWAPTSS*LRGSRL
Trigger: CAGCCTGCTGCCCCTCAGCCACGATGACGTGGGTGC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACACACTGGGAGCTGCTaGCCCGGGCCTCCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLHTGSC*PGPPRS
Trigger: AGACCGGGGAGGCCCGGGCCAGCAGCTCCCAGTGTG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACGAGTTAGGAAAGTaGGGGCCTCTGGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPHELGK*GPLARK
Trigger: TTTTCTGGCCAGAGGCCCCCACTTTCCTAACTCGTG...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGTGGGGGTGGAGGCCTaGCTCAGCCTGGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWVGVEA*LSLVLS
Trigger: AGACAGAACCAGGCTGAGCCAGGCCTCCACCCCCAC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCCAGCAAACGGGGGTaGGGGTGGAGGCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSPSKRG*GWRPGS
Trigger: TGAGCCAGGCCTCCACCCCCACCCCCGTTTGCTGGG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTGCAGAAGCGCACCTaGCACAGACCTCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLQKRT*HRPLWV
Trigger: CACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCCTGCAGGCTGGATGTaGGTGTGGAGCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWPAGWM*VWSRGP
Trigger: TGGACCCCGGCTCCACACCCACATCCAGCCTGCAGG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCAGCAGGCCTGCAGAGTaGATGAAGGTGAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPSRPAE*MKVRQR
Trigger: TCTCTGTCTCACCTTCATCCACTCTGCAGGCCTGCT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATACCGTACAAGGCCCTaGCAGCCTCCACGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGYRTRP*QPPRRA
Trigger: AGCCCTCCGTGGAGGCTGCCAGGGCCTTGTACGGTA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTGCAGAGACGGTCACTaGCTGGCTGAAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARACRDGH*LAEGLG
Trigger: CCCAAGCCCTTCAGCCAGCCAGTGACCGTCTCTGCA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTCTGCCCACGCCATTCTaGCCAGATGGAGCCGACCTG +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRLPTPF*PDGADL
Trigger: CAGGTCGGCTCCATCTGGTCAGAATGGCGTGGGCAG...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGAGACCATCTGGGAATaGGTCTGCTGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLETIWE*VCCRDG
Trigger: ACCGTCTCTGCAGCAGACTCATTCCCAGATGGTCTC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAATTCTGGGCCAGCTCTaGGGAGATGGGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPILGQL*GDGGAE
Trigger: TTCTGCTCCCCCATCTCCTCAGAGCTGGCCCAGAAT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACTCCAGGCAGCCCCCTTaGAGACGTGGACAATGGGCC +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDSRQPP*RRGQWA
Trigger: GGCCCATTGTCCACGTCTTCAAGGGGGCTGCCTGGA...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCATCCCGTTTCCGCCGTaGGCCCACTATGATGACCAT +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLIPFPP*AHYDDH
Trigger: ATGGTCATCATAGTGGGCTCACGGCGGAAACGGGAT...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCACTCTGAGACCAAGCTaGGCTCCCCAGCCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSTLRPS*APQPLS
Trigger: CGAGAGGGGCTGGGGAGCTCAGCTTGGTCTCAGAGT...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGTGGCACTTTGTGGGCTaGTTGGCTCGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWWHFVG*LARSGS
Trigger: GGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCA...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTGGCACTTTGTGGGCTaGTTGGCTCGCTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWWHFVG*LARSGS
Trigger: GGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCTGCTGCCATCGGCTTaGCCAGAGAGGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSLLPSA*PERLPT
Trigger: CGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACACTGTGGCCCCGCCGCTaGTGCCATCGGCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTLWPRR*CHRLAQ
Trigger: CTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAG...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTCACTTCCCTGCCCGTaGCACTTGCAGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRSLPCP*HLQLSL
Trigger: CAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACCGTGGTCACTTCCCTaGCCGTGCCACTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGPWSLP*PCHLQL
Trigger: CAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCACTTGGAGAGCCTGTTaGTGCTGGAAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLTWRAC*CWKCSS
Trigger: GCTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGT...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTGCTGCAGCAGGAACTaGCGGGCCACTTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWCCSRN*RATWRA
Trigger: GGCTCTCCAAGTGGCCCGGCAGTTCCTGCTGCAGCA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCACCGACACAGGCACCTaGACAGCAGAGGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARATDTGT*TAEADC
Trigger: ACAGTCTGCCTCTGCTGTGCAGGTGCCTGTGTCGGT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGGGGGCGACAGGATCTaGTGCATCTGTTGCGGGGTA +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASGGDRI*CICCGV
Trigger: TACCCCGCAACAGATGCAGCAGATCCTGTCGCCCCC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACTGCGGTTTCCCAGCCTaGTGCTGGGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDCGFPA*CWVRSC
Trigger: GCAGCTCCTCACCCAGCAGCAGGCTGGGAAACCGCA...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTGCGGTTTCCCAGCCTaGTGCTGGGTGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQCGFPA*CWVRSC
Trigger: GCAGCTCCTCACCCAGCAGCAGGCTGGGAAACCGCA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTGCTGGAAGGCCAGCTaGTTGTTCCCCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARACWKAS*LFPSAS
Trigger: AGAGGCACTGGGGAACAAGCAGCTGGCCTTCCAGCA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGCTGGAAGGCCAGCTaGTTGTTCCCCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARACWKAS*LFPSAS
Trigger: AGAGGCACTGGGGAACAAGCAGCTGGCCTTCCAGCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGCATTTGCAGGAGCTaGTGCTGGAAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPCICRS*CWKASC
Trigger: GCAGCTGGCCTTCCAGCAGCAGCTCCTGCAAATGCA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGCATTTGCAGGAGCTaGTGCTGGAAGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARACICRS*CWKASC
Trigger: GCAGCTGGCCTTCCAGCAGCAGCTCCTGCAAATGCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTTGAGCAGGTGCTGCTaGTGCAACTGTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPLSRCC*CNCCIC
Trigger: GCAAATGCAACAGTTGCAGCAGCAGCACCTGCTCAA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGACCAGCCCCTGCCTCTaGAGGTTGAGCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWTSPCL*RLSRCC
Trigger: GCAGCACCTGCTCAACCTGCAGAGGCAGGGGCTGGT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTAGGCTGACCAGCCCCTaGCTCTGCAGGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRRLTSP*LCRLSR
Trigger: CCTGCTCAACCTGCAGAGGCAGGGGCTGGTCAGCCT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGGGCAAACAGCTGCTTaGGGAAGGGTCTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWGQTAA*GRVWRG
Trigger: GCCCCTCCAGACCCTTCCGCAAGCAGCTGTTTGCCC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTAGGTCCAGCCCCTCCTaGTTGACGCTGTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRRSSPS*LTLSSA
Trigger: TGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGACCT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGAGGTCCAGCCCCTCCTaGTTGACGCTGTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQRSSPS*LTLSSA
Trigger: TGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGACCT...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCACAGCCTGGCCACTTaGACTCTCCGTGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRHSLAT*TLRVRT
Trigger: TGTACGGACACGGAGAGTGCAAGTGGCCAGGCTGTG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCCGGTCATCCAGGGCGTaGTCTGTGTTGAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLRSSRA*SVLRCL
Trigger: CAAACACCTCAACACAGAGCACGCCCTGGATGACCG...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTGGGCCATCATGGCCTaGAGCCGCTCGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWWAIMA*SRSLSL
Trigger: CAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGGCTGCTGCTGCCGTTaGTGGGCAGCGGCTCCACGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAGCCCR*WAAAPR
Trigger: CCGTGGAGCCGCTGCCCAGCAACGGCAGCAGCAGCC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACTGCCTGTCTTCCTCTaGCTCTGCTGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARALPVFL*LCWLLL
Trigger: AAGGAGGAGCCAGCAGAGGCAGAGGAAGACAGGCAG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGGTGGGGACCGTCCCTaGCCCTACGTGTTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPGGDRP*PYVFLS
Trigger: TGACAAAAACACGTAGGGGCAGGGACGGTCCCCACC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTCAGCGACCCTCACGTTaGTGCTGCTCTGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRQRPSR*CCSAQA
Trigger: AGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTG...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCATGCCCAGCGCCCCTaGAGGGCTGCTCATTCCATC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWHAQRP*RAAHSI
Trigger: GATGGAATGAGCAGCCCTGCAGGGGCGCTGGGCATG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGGTCACCACACAGTGTaGCACGTGGGTGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGGHHTV*HVGVHA
Trigger: TGCGTGCACACCCACGTGGCACACTGTGTGGTGACC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACTTGGCCTCTTTCCTTaGAGCCTATCCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARALGLFP*SLSRVP
Trigger: GGGGACCCTGGATAGGCTGCAAGGAAAGAGGCCAAG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTAACCCCGCCGGGGCATaGCACTTTGTGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRNPAGA*HFVGCL
Trigger: CAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGAACCCCGCCGGGGCATaGCACTTTGTGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWNPAGA*HFVGCL
Trigger: CAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTTGCAGTTGTCCCTGTaGCCCCGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQLQLSL*PRRCCH
Trigger: ATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTTGCTGTCTGCACCCGTaGTCACTTCCCTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRCCLHP*SLPCPC
Trigger: GCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCA...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGTGCTGTCTGCACCCGTaGTCACTTCCCTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWCCLHP*SLPCPC
Trigger: GCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCA...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAAGAGCCTGTTGCTGCTaGAAGTGCAGCAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPRACCC*KCSSSA
Trigger: CGCAGAGCTGCTGCACTTCCAGCAGCAACAGGCTCT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTAGGGCTTGCTGCTGCTaGAGCAAGGCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRRACCC*SKACSC
Trigger: GCAGCTGCAGGCCTTGCTCCAGCAGCAGCAAGCCCT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTTCCCAGCCTGCTGCTaGGTGAGGAGCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQFPACC*VRSCRW
Trigger: CCACCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTGCAGGAGCTGCTGCTaGAAGGCCAGCTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARACRSCC*KASCLF
Trigger: GAACAAGCAGCTGGCCTTCCAGCAGCAGCTCCTGCA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATGCAGGAGCTGCTGCTaGAAGGCCAGCTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPCRSCC*KASCLF
Trigger: GAACAAGCAGCTGGCCTTCCAGCAGCAGCTCCTGCA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGCAGGAGCTGCTGCTaGAAGGCCAGCTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARACRSCC*KASCLF
Trigger: GAACAAGCAGCTGGCCTTCCAGCAGCAGCTCCTGCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATCGCCCTTCCACAGCTaGGGCAGGTCTGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGSPFHS*GRSVGQ
Trigger: TTGCCCAACAGACCTGCCCCAGCTGTGGAAGGGCGA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTCGCCCTTCCACAGCTaGGGCAGGTCTGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWSPFHS*GRSVGQ
Trigger: TTGCCCAACAGACCTGCCCCAGCTGTGGAAGGGCGA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAATCTGTACCCGGCACTaGGCTGTACTCCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAICTRH*AVLRSS
Trigger: GGATGACCGGAGTACAGCCCAGTGCCGGGTACAGAT...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACTCTCCTTGGCGAGCTaGATCTCCAGCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGLSLAS*ISSCCT
Trigger: GGTGCAGCAGCTGGAGATCCAGCTCGCCAAGGAGAG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGCCGCTCGCTCTCCTTaGCGAGCTGGATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWAARSP*RAGSPA
Trigger: AGCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTGGCCGCATGTGCAGGTaGGCCATCATGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSGRMCR*AIMACS
Trigger: GCTGCAGGCCATGATGGCCCACCTGCACATGCGGCC...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCTTCACCTGCACCTGGTaGCTGTACTGGGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSFTCTW*LYWGGE
Trigger: CTCCCCGCCCCAGTACAGCCACCAGGTGCAGGTGAA...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACTTTGTCAGGTCACACTaGGAGCTGCTGGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDFVRSH*ELLARA
Trigger: GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAA...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGGGTGGGAGCTGGGGTaGAGAGTTCTTTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLGWELG*RVLSSQ
Trigger: CTGTGAAGAAAGAACTCTCCACCCCAGCTCCCACCC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGGGCTGTTTCTTCTaGGGATGGAGGCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAGGCFF*GWRHSS
Trigger: GGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGGTTCTGTCTCAGGTTaGGGGCGGGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSGSVSG*GRVWSQ
Trigger: CTGGCTCCAGACCCGCCCCCAACCTGAGACAGAACC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGGTTCTGTCTCAGGTTaGGGGCGGGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQGSVSG*GRVWSQ
Trigger: CTGGCTCCAGACCCGCCCCCAACCTGAGACAGAACC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGGTTCTGTCTCAGGTTaGGGGCGGGTCTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDGSVSG*GRVWSQ
Trigger: CTGGCTCCAGACCCGCCCCCAACCTGAGACAGAACC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAGCCGGGGTGGGAGACTaGGAGGGCAGGTGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTAGVGD*EGRCWG
Trigger: TCCCCAGCACCTGCCCTCCCAGTCTCCCACCCCGGC...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAGGAGGGCTTCCAGCCTaGGGCCGGGGTGGGAGACTG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTGGLPA*GRGGRL
Trigger: CAGTCTCCCACCCCGGCCCCAGGCTGGAAGCCCTCC...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGAGAACCCTGCGGCGGTaGTCCTCTCCATCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWRTLRR*SSPSLQ
Trigger: CTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCT...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCACCTGGGAATGGGTGTaGATGTCTCCAGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLTWEWV*MSPELV
Trigger: CACCAGCTCTGGAGACATCCACACCCATTCCCAGGT...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGCCCCCTTGAAGACGTaGACAATGGGCCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAAPLKT*TMGLEG
Trigger: TCCTTCCAGGCCCATTGTCCACGTCTTCAAGGGGGC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACAGACGGCTGAGGCCCTaGGGATGTGCACAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDRRLRP*GCAQGS
Trigger: AGACCCCTGTGCACATCCCCAGGGCCTCAGCCGTCT...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTACCGTACAAGGCCCTaGCAGCCTCCACGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWYRTRP*QPPRRA
Trigger: AGCCCTCCGTGGAGGCTGCCAGGGCCTTGTACGGTA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CAA 72 bp CCTCCCCTGCTCCCCAAATACACTCTTCCCTGGGCCTaGTCCCTAGGGACAGGCCTGGGACTCCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PPLLPKYTLPWA*SLGTGLGLLSA
Trigger: GGCAGAAAGGAGTCCCAGGCCTGTCCCTAGGGACAAGGCCCAGGGAAGAGTGTATTTGGGGAGCAGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGAGACCATCTGGGAATaGGTCTGCTGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRETIWE*VCCRDG
Trigger: ACCGTCTCTGCAGCAGACTCATTCCCAGATGGTCTC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTCCACACGGCACCCTTaGCGTTCTCCACGCGGACGA +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSSTRHP*RSPRGR
Trigger: TCGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACACCACGTCATCGTGGCTaGGGGGCAGCAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTPRHRG*GAAGCW
Trigger: CCAGCAGCCTGCTGCCCCTCAGCCACGATGACGTGG...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTAGTCCTGGACTTGCCTTaGGGCTCGGGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLVLDLP*GSGGAV
Trigger: CACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGAC...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCACAGACCTCTGTGGGTaGGGCGGTACCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSTDLCG*GGTRPL
Trigger: AAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGT...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTCCAGGCAGCCCCCTTaGAGACGTGGACAATGGGCC +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSSRQPP*RRGQWA
Trigger: GGCCCATTGTCCACGTCTTCAAGGGGGCTGCCTGGA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTACTCTGAGACCAAGCTaGGCTCCCCAGCCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSTLRPS*APQPLS
Trigger: CGAGAGGGGCTGGGGAGCTCAGCTTGGTCTCAGAGT...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCGGTCACTGGCTGGCTaGAGGGCTTGGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARSLAG*RAWAPR
Trigger: CCTCGGAGCCCAAGCCCTTCAGCCAGCCAGTGACCG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCTTGCCCAGAGAGGCTaGCCACGCCATTCTGACCAG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWLAQRG*PRHSDQ
Trigger: CTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGCAAG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTGGCCCCGCCGCTGCTaGCATCGGCTTGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAWPRRC*HRLAQR
Trigger: TCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCCGTGGTCACTTCCCTaGCCGTGCCACTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWPWSLP*PCHLQL
Trigger: CAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTCACCATTGCTGTCTaGACCCGTGGTCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLTIAV*TRGHFP
Trigger: AGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCTCACCATTGCTGTCTaGACCCGTGGTCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRLTIAV*TRGHFP
Trigger: AGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGACTCATCTCACCATTaGTGTCTGCACCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLDSSHH*CLHPWS
Trigger: TGACCACGGGTGCAGACAGCAATGGTGAGATGAGTC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGTTGCTGCTGGAAGTaGAGCAGCTCTGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGCCCWK*SSSAGL
Trigger: GAGTCCCGCAGAGCTGCTGCACTTCCAGCAGCAACA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGGAGAGCCTGTTGCTaGTGGAAGTGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAWRACC*WKCSSS
Trigger: AGAGCTGCTGCACTTCCAGCAGCAACAGGCTCTCCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCACTTGGAGAGCCTGTTaGTGCTGGAAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARATWRAC*CWKCSS
Trigger: GCTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTGCTGCAGCAGGAACTaGCGGGCCACTTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSCCSRN*RATWRA
Trigger: GGCTCTCCAAGTGGCCCGGCAGTTCCTGCTGCAGCA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAACCGACACAGGCACCTaGACAGCAGAGGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGTDTGT*TAEADC
Trigger: ACAGTCTGCCTCTGCTGTGCAGGTGCCTGTGTCGGT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTGCGGGGTAAGCATCTaGGGCGACATCATGGCCACC +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQCGVSI*GDIMAT
Trigger: GGTGGCCATGATGTCGCCGCAGATGCTTACCCCGCA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCATCTGCTGCATCTGTTaGGGGGTAAGCATCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAICCIC*GVSICG
Trigger: GCCGCAGATGCTTACCCCGCAACAGATGCAGCAGAT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGGCGACAGGATCTGCTaGATCTGTTGCGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGGDRIC*ICCGVS
Trigger: GCTTACCCCGCAACAGATGCAGCAGATCCTGTCGCC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACATGCTGGAGCAAGGCCTaGAGCTGCGGGGGCGACAGG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTCWSKA*SCGGDR
Trigger: CCTGTCGCCCCCGCAGCTGCAGGCCTTGCTCCAGCA...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGATGAGGGCTTGCTGCTaGTGGAGCAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWMRACC*WSKACS
Trigger: GCTGCAGGCCTTGCTCCAGCAGCAGCAAGCCCTCAT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTGCTTGTTCCCCAGTaGCTCTTTGGGCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLLVPQ*LFGLRF
Trigger: AAACCGCAGCCCAAAGAGGCACTGGGGAACAAGCAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGCTGGAAGGCCAGCTaGTTGTTCCCCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGCWKAS*LFPSAS
Trigger: AGAGGCACTGGGGAACAAGCAGCTGGCCTTCCAGCA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTAGGCTGACCAGCCCCTaGCTCTGCAGGTTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSRLTSP*LCRLSR
Trigger: CCTGCTCAACCTGCAGAGGCAGGGGCTGGTCAGCCT...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCACAGCCTGGCCACTTaGACTCTCCGTGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWHSLAT*TLRVRT
Trigger: TGTACGGACACGGAGAGTGCAAGTGGCCAGGCTGTG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGAGCTGCTGCACCACCTaGATCTGTACCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWSCCTT*ICTRHW
Trigger: CCAGTGCCGGGTACAGATGCAGGTGGTGCAGCAGCT...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAAGCTGGATCTCCAGCTaGTGCACCACCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPSWISS*CTTCIC
Trigger: ACAGATGCAGGTGGTGCAGCAGCTGGAGATCCAGCT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTATCCGAGGGCCGCATGTaGAGGTGGGCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLSEGRM*RWAIMA
Trigger: GGCCATGATGGCCCACCTGCACATGCGGCCCTCGGA...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCATCATTCAGGGTCAGCTaGCTGTCAGGGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPSFRVS*LSGVSR
Trigger: CCTGGAAACCCCTGACAGGCAGCTGACCCTGAATGA...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTCATTCAGGGTCAGCTaGCTGTCAGGGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRSFRVS*LSGVSR
Trigger: CCTGGAAACCCCTGACAGGCAGCTGACCCTGAATGA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGGCTCCTCCTTCACCTaGACCTGGTGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWGSSFT*TWWLYW
Trigger: CCAGTACAGCCACCAGGTGCAGGTGAAGGAGGAGCC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGGCTCCTCCTTCACCTaGACCTGGTGGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQGSSFT*TWWLYW
Trigger: CCAGTACAGCCACCAGGTGCAGGTGAAGGAGGAGCC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACTGCCTGTCTTCCTCTaGCTCTGCTGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGLPVFL*LCWLLL
Trigger: AAGGAGGAGCCAGCAGAGGCAGAGGAAGACAGGCAG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAACGGCCAGAGCCAGGTaGCAGGGGGCCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTTARAR*QGALGL
Trigger: CAAACCCAGGGCCCCCTGGCACCTGGCTCTGGCCGT...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGAGCTTGGCTCCACCTaGAGAAGCGCACCTGGCACA +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSELGST*RSAPGT
Trigger: TGTGCCAGGTGCGCTTCTGCAGGTGGAGCCAAGCTC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGACTGCAGAGAGGCCTaGAGGCTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWDCREA*RLDVGV
Trigger: CACACCCACATCCAGCCTGCAGGCCTCTCTGCAGTC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACAGGTAAAAGAACCCTaGGGCGGTGGTCCTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAQVKEP*GGGPLH
Trigger: ATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTCCTACTGCTTCAGGATaGCACCACCACACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASPTASG*HHHTWA
Trigger: TGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGG...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACCTACTGCTTCAGGATaGCACCACCACACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGPTASG*HHHTWA
Trigger: TGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTGTGCCACGTGGGTGTaGACGCACACTAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARACATWV*THTNGP
Trigger: AGGACCATTAGTGTGCGTGCACACCCACGTGGCACA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGGTCACCACACAGTGTaGCACGTGGGTGTGCACGCA +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWGHHTV*HVGVHA
Trigger: TGCGTGCACACCCACGTGGCACACTGTGTGGTGACC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTGGGCATGGCACTTTGTaGGCTGCTTGGCTCGCTCCG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSGHGTL*AAWLAP
Trigger: CGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCC...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGAACTGCCGGGCCACTTaGAGAGCCTGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWNCRAT*RACCCW
Trigger: CCAGCAGCAACAGGCTCTCCAAGTGGCCCGGCAGTT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTTCCCAGCCTGCTGCTaGGTGAGGAGCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSFPACC*VRSCRW
Trigger: CCACCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGCAGGAGCTGCTGCTaGAAGGCCAGCTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGCRSCC*KASCLF
Trigger: GAACAAGCAGCTGGCCTTCCAGCAGCAGCTCCTGCA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGCTTGCGGAAGGGTCTaGAGGGGCCCCGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAACGRV*RGPEAW
Trigger: CCAAGCCTCGGGGCCCCTCCAGACCCTTCCGCAAGC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTATCTGTACCCGGCACTaGGCTGTACTCCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASICTRH*AVLRSS
Trigger: GGATGACCGGAGTACAGCCCAGTGCCGGGTACAGAT...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGCTCCCTGTCATCTTTaGCGGTCTCCGCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLAPCHL*RSPLLI
Trigger: TATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGATGGGGCCTGGATTCTaGAAGGGAGGGGTCTCACCC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWMGPGF*KGGVSP
Trigger: GGGTGAGACCCCTCCCTTCCAGAATCCAGGCCCCAT...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCCCGGTCTGAGTCCTaGACTTGCCTTGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSPRSES*TCLEAR
Trigger: CCGAGCCTCAAGGCAAGTCCAGGACTCAGACCGGGG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAAAGTGGGGGCCTCTaGCCAGAAAACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWESGGL*PENTAR
Trigger: TCTGGCCGTGTTTTCTGGCCAGAGGCCCCCACTTTC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGGGGGCTGTTTCTTCTaGGGATGGAGGCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWGGCFF*GWRHSS
Trigger: GGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCTGCAGAAGCGCACCTaGCACAGACCTCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQLQKRT*HRPLWV
Trigger: CACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGCCTCTCAGGAGGGGTaGCTTGTGAGGGGTGTATGT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGASQEG*LVRGVC
Trigger: ACATACACCCCTCACAAGCCACCCCTCCTGAGAGGC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGCCTGGAAGGACACCTaGGAATGGGTGTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAAWKDT*EWVWMS
Trigger: AGACATCCACACCCATTCCCAGGTGTCCTTCCAGGC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTATAAGAGGTGCAGGCTaGTGTGCTGGGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRIRGAG*CAGAGG
Trigger: TCCCCCAGCCCCAGCACACCAGCCTGCACCTCTTAT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGGAGTGTCCAGAAGGTaGCGTAAGACCAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRGVSRR*RKTSES
Trigger: GCTCTCACTGGTCTTACGCCACCTTCTGGACACTCC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCCTCCCAGCATTTGGCTaGAGAGTTCCAGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLLPAFG*RVPAVW
Trigger: CCAAACTGCTGGAACTCTCCAGCCAAATGCTGGGAG...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGGATTAGGGCTGTGGTaGAGCAGGCCTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWGLGLW*SRPAEW
Trigger: CCACTCTGCAGGCCTGCTCCACCACAGCCCTAATCC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CAA 72 bp GGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTaGGCCCTTGGCCTCTTTCCTTGCAGCCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGVRGHLWLSS*ALGLFPCSLSR
Trigger: CCTGGATAGGCTGCAAGGAAAGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGAGACCATCTGGGAATaGGTCTGCTGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGETIWE*VCCRDG
Trigger: ACCGTCTCTGCAGCAGACTCATTCCCAGATGGTCTC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGAGGCCAGGGGTGTTATaGGCATCCGATACGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQRPGVL*ASDTPS
Trigger: ACTGGGCGTATCGGATGCTCATAACACCCCTGGCCT...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCAGGCCAGGGGTGTTATaGGCATCCGATACGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSRPGVL*ASDTPS
Trigger: ACTGGGCGTATCGGATGCTCATAACACCCCTGGCCT...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCCCCTTTGTATAGGTTaGATGATCCCGTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAPLCIG*MIPFPP
Trigger: CGGCGGAAACGGGATCATTCAACCTATACAAAGGGG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCTGCTGCCATCGGCTTaGCCAGAGAGGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGALLPSA*PERLPT
Trigger: CGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGACTCATCTCACCATTaGTGTCTGCACCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARADSSHH*CLHPWS
Trigger: TGACCACGGGTGCAGACAGCAATGGTGAGATGAGTC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGTGTTGCTGCTGGAAGTaGAGCAGCTCTGCGGGACTC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWCCCWK*SSSAGL
Trigger: GAGTCCCGCAGAGCTGCTGCACTTCCAGCAGCAACA...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAACTTGGAGAGCCTGTTaGTGCTGGAAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGTWRAC*CWKCSS
Trigger: GCTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACAGAGGCAGACTGTTTaGTGTCATTGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPQRQTV*CHCSLG
Trigger: CCCCAGGGAACAATGACAGCAAACAGTCTGCCTCTG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACAGAGGCAGACTGTTTaGTGTCATTGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAQRQTV*CHCSLG
Trigger: CCCCAGGGAACAATGACAGCAAACAGTCTGCCTCTG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTACCGACACAGGCACCTaGACAGCAGAGGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRTDTGT*TAEADC
Trigger: ACAGTCTGCCTCTGCTGTGCAGGTGCCTGTGTCGGT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGGCGACAGGATCTGCTaGATCTGTTGCGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWGDRIC*ICCGVS
Trigger: GCTTACCCCGCAACAGATGCAGCAGATCCTGTCGCC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGGCGACAGGATCTGCTaGATCTGTTGCGGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQGDRIC*ICCGVS
Trigger: GCTTACCCCGCAACAGATGCAGCAGATCCTGTCGCC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTCTGCTTGTTCCCCAGTaGCTCTTTGGGCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASLLVPQ*LFGLRF
Trigger: AAACCGCAGCCCAAAGAGGCACTGGGGAACAAGCAG...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTGCTGGAAGGCCAGCTaGTTGTTCCCCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQCWKAS*LFPSAS
Trigger: AGAGGCACTGGGGAACAAGCAGCTGGCCTTCCAGCA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCACAGCCTGGCCACTTaGACTCTCCGTGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWHSLAT*TLRVRT
Trigger: TGTACGGACACGGAGAGTGCAAGTGGCCAGGCTGTG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACCACAGCCTGGCCACTTaGACTCTCCGTGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDHSLAT*TLRVRT
Trigger: TGTACGGACACGGAGAGTGCAAGTGGCCAGGCTGTG...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACGGTCATCCAGGGCGTaGTCTGTGTTGAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGRSSRA*SVLRCL
Trigger: CAAACACCTCAACACAGAGCACGCCCTGGATGACCG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGGATCTCCAGCTGCTaGACCACCTGCATCTGTACC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGWISSC*TTCICT
Trigger: GGTACAGATGCAGGTGGTGCAGCAGCTGGAGATCCA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGAGCTGGATCTCCAGCTaGTGCACCACCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWSWISS*CTTCIC
Trigger: ACAGATGCAGGTGGTGCAGCAGCTGGAGATCCAGCT...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAAGCTGGATCTCCAGCTaGTGCACCACCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGSWISS*CTTCIC
Trigger: ACAGATGCAGGTGGTGCAGCAGCTGGAGATCCAGCT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGAGCAGAACTTGTCACTaGTTCTCCGACGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQSRTCH*FSDGLG
Trigger: GCCCAGCCCGTCGGAGAAGCAGTGACAAGTTCTGCT...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGAGCAGAACTTGTCACTaGTTCTCCGACGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWSRTCH*FSDGLG
Trigger: GCCCAGCCCGTCGGAGAAGCAGTGACAAGTTCTGCT...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTCATTCAGGGTCAGCTaGCTGTCAGGGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWSFRVS*LSGVSR
Trigger: CCTGGAAACCCCTGACAGGCAGCTGACCCTGAATGA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGTAGCTGGCATTAAGTaGTCCATAGCTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLVAGIK*SIAEAR
Trigger: TCTGGCCTCAGCTATGGAGCACTTAATGCCAGCTAC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCTGCCTGTCTTCCTCTaGCTCTGCTGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQLPVFL*LCWLLL
Trigger: AAGGAGGAGCCAGCAGAGGCAGAGGAAGACAGGCAG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGGGGAGGCCCGGGCTaGCTGTCTTCCTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARGGPG*LSSSAS
Trigger: AGAGGCAGAGGAAGACAGGCAGCCCGGGCCTCCCCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCCCTCACGTTGCTGCTaGTCTGCCCAGGCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAPSRCC*SAQAPR
Trigger: TCGGGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCGACCCTCACGTTGCTaGTGCTCTGCCCAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARPSRC*CSAQAP
Trigger: GGGAGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTGCAGCAAATCAGCTaGCTTGCTCCAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLQQIS*LAPTLW
Trigger: CCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGTGCCACGTGGGTGTaGACGCACACTAATGGTCCT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGCATWV*THTNGP
Trigger: AGGACCATTAGTGTGCGTGCACACCCACGTGGCACA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCTTGGCCTCTTTCCTTaGAGCCTATCCAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWLGLFP*SLSRVP
Trigger: GGGGACCCTGGATAGGCTGCAAGGAAAGAGGCCAAG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCCTGGGACTCCTTTCTaGCCTCAAGGAGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQPGTPF*PQGGSV
Trigger: GACACTCCCTCCTTGAGGGCAGAAAGGAGTCCCAGG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGCCATTCTGACCAGATaGAGCCGACCTGATTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRAILTR*SRPDCL
Trigger: GAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTATTGCAGTTGTCCCTGTaGCCCCGCCGCTGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLLQLSL*PRRCCH
Trigger: ATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAA...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTAACTGCCGGGCCACTTaGAGAGCCTGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSNCRAT*RACCCW
Trigger: CCAGCAGCAACAGGCTCTCCAAGTGGCCCGGCAGTT...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTACTCCTGTAGCTGCTaGAGCATGAGGGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWYSCSC*SMRACC
Trigger: GCAGCAAGCCCTCATGCTCCAGCAGCTACAGGAGTA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCTGGGGCAGGTCTGTTaGGCAAACAGCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSLGQVC*ANSCLR
Trigger: CCGCAAGCAGCTGTTTGCCCAACAGACCTGCCCCAG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307972.10
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCAGGGTCTCACAGCCTaGCCACTTGCACTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSQGLTA*PLALSV
Trigger: CACGGAGAGTGCAAGTGGCCAGGCTGTGAGACCCTG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGATCTGTACCCGGCACTaGGCTGTACTCCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWICTRH*AVLRSS
Trigger: GGATGACCGGAGTACAGCCCAGTGCCGGGTACAGAT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCATCTGTACCCGGCACTaGGCTGTACTCCGGTCATCC +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSICTRH*AVLRSS
Trigger: GGATGACCGGAGTACAGCCCAGTGCCGGGTACAGAT...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCAGAGACGGTCACCTTaGAGAATGAGGAGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWQRRSP*RMRRSR
Trigger: CCGGCTCCTCCTCATTCTCCAAGGTGACCGTCTCTG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACGGCGTTCTTCCAGGTaGCAGTGTTTCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARARRSSR*QCFCGN
Trigger: ATTTCCGCAGAAACACTGCCACCTGGAAGAACGCCG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTGCAGGCTGAGGTTGTaGCGCACGGCGTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSCRLRL*RTAFFQ
Trigger: CTGGAAGAACGCCGTGCGCCACAACCTCAGCCTGCA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGCTCCCTGTCATCTTTaGCGGTCTCCGCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPAPCHL*RSPLLI
Trigger: TATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGCTCCCTGTCATCTTTaGCGGTCTCCGCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAAPCHL*RSPLLI
Trigger: TATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTGTTCTTCACCAGGGTaGGGCTCCCTGTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRCSSPG*GSLSSL
Trigger: CAAAGATGACAGGGAGCCCCACCCTGGTGAAGAACA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAGCACCCACGTCATCGTaGCTGAGGGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTAPTSS*LRGSRL
Trigger: CAGCCTGCTGCCCCTCAGCCACGATGACGTGGGTGC...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCTCCGTGTCCTCTACTaGTCCAAGACCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWLRVLY*SKTRGC
Trigger: ACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACTCCGTGTCCTCTACTaGTCCAAGACCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGLRVLY*SKTRGC
Trigger: ACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGAAAGTGGGGGCCTCTaGCCAGAAAACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWESGGL*PENTAR
Trigger: TCTGGCCGTGTTTTCTGGCCAGAGGCCCCCACTTTC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACACGAGTTAGGAAAGTaGGGGCCTCTGGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPHELGK*GPLARK
Trigger: TTTTCTGGCCAGAGGCCCCCACTTTCCTAACTCGTG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCACGAGTTAGGAAAGTaGGGGCCTCTGGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAHELGK*GPLARK
Trigger: TTTTCTGGCCAGAGGCCCCCACTTTCCTAACTCGTG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGGGGGCTGTTTCTTCTaGGGATGGAGGCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDGGCFF*GWRHSS
Trigger: GGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCCTGCAGGCTGGATGTaGGTGTGGAGCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAPAGWM*VWSRGP
Trigger: TGGACCCCGGCTCCACACCCACATCCAGCCTGCAGG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGCCTCTCAGGAGGGGTaGCTTGTGAGGGGTGTATGT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQASQEG*LVRGVC
Trigger: ACATACACCCCTCACAAGCCACCCCTCCTGAGAGGC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGACACAGTGTGCCACGTaGGTGTGCACGCACACTAAT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRTQCAT*VCTHTN
Trigger: ATTAGTGTGCGTGCACACCCACGTGGCACACTGTGT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACTCCCAGCATTTGGCTaGAGAGTTCCAGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARALPAFG*RVPAVW
Trigger: CCAAACTGCTGGAACTCTCCAGCCAAATGCTGGGAG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCCTTCTCCCAGCATTTaGCTGGAGAGTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAPSPSI*LESSSS
Trigger: ACTGCTGGAACTCTCCAGCCAAATGCTGGGAGAAGG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTGGATTAGGGCTGTGGTaGAGCAGGCCTGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSGLGLW*SRPAEW
Trigger: CCACTCTGCAGGCCTGCTCCACCACAGCCCTAATCC...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGAGAGGATTAGGGCTGTaGTGGAGCAGGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWRGLGL*WSRPAE
Trigger: CTCTGCAGGCCTGCTCCACCACAGCCCTAATCCTCT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCCTCTCGAGGTACCATaGGGGACAGGGAATTCACCC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWPLEVP*GTGNSP
Trigger: GGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTTAAACAGTATCTGGTaGGGAGACTCTGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPLNSIW*GDSETK
Trigger: CTTGGTCTCAGAGTCTCCCCACCAGATACTGTTTAA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CAA 72 bp GCACTACACACACACACGCCTATCCAGGCAGCCCCCTaGAAGACGTGGACAATGGGCCTGGAAGGACACCTG +
Preference number: 4 (lower is better)
Translates to: ALHTHTPIQAAP*KTWTMGLEGHL
Trigger: CAGGTGTCCTTCCAGGCCCATTGTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCAGATGGAGCCGACCTaGTTGTCTCCGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWQMEPT*LSPRQI
Trigger: AATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCCACACGGCACCCTTaGCGTTCTCCACGCGGACGA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASTRHP*RSPRGR
Trigger: TCGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCTGGTGGGGAGACTCTaGGACCAAGCTGAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGALVGRL*DQAELP
Trigger: GGGGAGCTCAGCTTGGTCTCAGAGTCTCCCCACCAG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGAAGTGCAGCAGCTCTaGGGGACTCATCTCACCATT +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGEVQQL*GTHLTI
Trigger: AATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACAGAGGCAGACTGTTTaGTGTCATTGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGQRQTV*CHCSLG
Trigger: CCCCAGGGAACAATGACAGCAAACAGTCTGCCTCTG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTATGCGGGGTAAGCATCTaGGGCGACATCATGGCCACC +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLCGVSI*GDIMAT
Trigger: GGTGGCCATGATGTCGCCGCAGATGCTTACCCCGCA...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTATCTGCTGCATCTGTTaGGGGGTAAGCATCTGCGGC +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRICCIC*GVSICG
Trigger: GCCGCAGATGCTTACCCCGCAACAGATGCAGCAGAT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGATCTGCTGCATCTGTTaGGGGGTAAGCATCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWICCIC*GVSICG
Trigger: GCCGCAGATGCTTACCCCGCAACAGATGCAGCAGAT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCTGCTTGTTCCCCAGTaGCTCTTTGGGCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQLLVPQ*LFGLRF
Trigger: AAACCGCAGCCCAAAGAGGCACTGGGGAACAAGCAG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATGCAACTGTTGCATTTaGAGGAGCTGCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GGCFFWGWRHSSSTQARACNCCI*RSCCWK
Trigger: CTTCCAGCAGCAGCTCCTGCAAATGCAACAGTTGCA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGGTCCAGCCCCTCCTaGTTGACGCTGTCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARSSPS*LTLSSA
Trigger: TGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGACCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCGGTCATCCAGGGCGTaGTCTGTGTTGAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWRSSRA*SVLRCL
Trigger: CAAACACCTCAACACAGAGCACGCCCTGGATGACCG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTGGATCTCCAGCTGCTaGACCACCTGCATCTGTACC +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQWISSC*TTCICT
Trigger: GGTACAGATGCAGGTGGTGCAGCAGCTGGAGATCCA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGAGCTGGATCTCCAGCTaGTGCACCACCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQSWISS*CTTCIC
Trigger: ACAGATGCAGGTGGTGCAGCAGCTGGAGATCCAGCT...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTCATTCAGGGTCAGCTaGCTGTCAGGGGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQSFRVS*LSGVSR
Trigger: CCTGGAAACCCCTGACAGGCAGCTGACCCTGAATGA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGTAGCTGGCATTAAGTaGTCCATAGCTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SLPLRVFVRSHWELLARAVAGIK*SIAEAR
Trigger: TCTGGCCTCAGCTATGGAGCACTTAATGCCAGCTAC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCAGCGACCCTCACGTTaGTGCTGCTCTGCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAQRPSR*CCSAQA
Trigger: AGCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTAACACGGGATAAGAGGTaGAGGCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLTRDKR*RLVCWG
Trigger: GCCCCAGCACACCAGCCTGCACCTCTTATCCCGTGT...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAACTTTGTGGGCTGCTTaGCTCGCTCCGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTTLWAA*LAPAPL
Trigger: GAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGT...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCACTTTGTGGGCTGCTTaGCTCGCTCCGGCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGATLWAA*LAPAPL
Trigger: GAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGCCATTCTGACCAGATaGAGCCGACCTGATTGTCTC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGAILTR*SRPDCL
Trigger: GAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGTACTCCTGTAGCTGCTaGAGCATGAGGGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWYSCSC*SMRACC
Trigger: GCAGCAAGCCCTCATGCTCCAGCAGCTACAGGAGTA...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTTCCCAGCCTGCTGCTaGGTGAGGAGCTGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAFPACC*VRSCRW
Trigger: CCACCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACTCTCCTTGGCGAGCTaGATCTCCAGCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLLSLAS*ISSCCT
Trigger: GGTGCAGCAGCTGGAGATCCAGCTCGCCAAGGAGAG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAACCGGGTTCAGTGGCTaGCTGAAGGGCTTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTTGFSG*LKGLGS
Trigger: GGAGCCCAAGCCCTTCAGCCAGCCACTGAACCCGGT...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307972.10
CDS-3UTR CCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTCGGCGTTCTTCCAGGTaGCAGTGTTTCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASRRSSR*QCFCGN
Trigger: ATTTCCGCAGAAACACTGCCACCTGGAAGAACGCCG...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGTTCTTCACCAGGGTaGGGCTCCCTGTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGCSSPG*GSLSSL
Trigger: CAAAGATGACAGGGAGCCCCACCCTGGTGAAGAACA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACATTCACCTGCACCTGGTaGCTGTACTGGGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTFTCTW*LYWGGE
Trigger: CTCCCCGCCCCAGTACAGCCACCAGGTGCAGGTGAA...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTTCACCTGCACCTGGTaGCTGTACTGGGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAFTCTW*LYWGGE
Trigger: CTCCCCGCCCCAGTACAGCCACCAGGTGCAGGTGAA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCCTTCACCTGCACCTaGTGGCTGTACTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASFTCT*WLYWGG
Trigger: CCCGCCCCAGTACAGCCACCAGGTGCAGGTGAAGGA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCCCCGGTCTGAGTCCTaGACTTGCCTTGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAPRSES*TCLEAR
Trigger: CCGAGCCTCAAGGCAAGTCCAGGACTCAGACCGGGG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTTTGGCTTAGCAGCTTaGCCCTTGGCCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRFGLAA*PLASFL
Trigger: AAGGAAAGAGGCCAAGGGCCAAGCTGCTAAGCCAAA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGGAGTGTCCAGAAGGTaGCGTAAGACCAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWGVSRR*RKTSES
Trigger: GCTCTCACTGGTCTTACGCCACCTTCTGGACACTCC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCAGATGGAGCCGACCTaGTTGTCTCCGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSQMEPT*LSPRQI
Trigger: AATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTTGTGGGAAGGGTGATTaGCTCCAGTTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASCGKGD*LQFSFL
Trigger: GAGAAAGCTGAACTGGAGTCAATCACCCTTCCCACA...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTAGAAAGCGGGGCGAGTaGGCGACAGACAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRRKRGE*ATDRNR
Trigger: TCTATTTCTGTCTGTCGCTCACTCGCCCCGCTTTCT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGACTCATCTCACCATTaGTGTCTGCACCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDDSSHH*CLHPWS
Trigger: TGACCACGGGTGCAGACAGCAATGGTGAGATGAGTC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGACTCATCTCACCATTaGTGTCTGCACCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWDSSHH*CLHPWS
Trigger: TGACCACGGGTGCAGACAGCAATGGTGAGATGAGTC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGAAGTGCAGCAGCTCTaGGGGACTCATCTCACCATT +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDEVQQL*GTHLTI
Trigger: AATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGAAGTGCAGCAGCTCTaGGGGACTCATCTCACCATT +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQEVQQL*GTHLTI
Trigger: AATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTGGAGAGCCTGTTGCTaGTGGAAGTGCAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSWRACC*WKCSSS
Trigger: AGAGCTGCTGCACTTCCAGCAGCAACAGGCTCTCCA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGCAGAGGCAGACTGTTTaGTGTCATTGTTCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQQRQTV*CHCSLG
Trigger: CCCCAGGGAACAATGACAGCAAACAGTCTGCCTCTG...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGCATGAGGGCTTGCTaGTGCTGGAGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASMRAC*CWSKAC
Trigger: GCAGGCCTTGCTCCAGCAGCAGCAAGCCCTCATGCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTTGAGCAGGTGCTGCTaGTGCAACTGTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWLSRCC*CNCCIC
Trigger: GCAAATGCAACAGTTGCAGCAGCAGCACCTGCTCAA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATTGAGCAGGTGCTGCTaGTGCAACTGTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGLSRCC*CNCCIC
Trigger: GCAAATGCAACAGTTGCAGCAGCAGCACCTGCTCAA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGCTGCTGCACCACCTaGATCTGTACCCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASCCTT*ICTRHW
Trigger: CCAGTGCCGGGTACAGATGCAGGTGGTGCAGCAGCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGTAGCTGGCATTAAGTaGTCCATAGCTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGVAGIK*SIAEAR
Trigger: TCTGGCCTCAGCTATGGAGCACTTAATGCCAGCTAC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACTGCCTGTCTTCCTCTaGCTCTGCTGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLLPVFL*LCWLLL
Trigger: AAGGAGGAGCCAGCAGAGGCAGAGGAAGACAGGCAG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGCAAATCAGCTGCCTTaGTCCAACACTCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGANQLP*SNTLAR
Trigger: TCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTCTGCAGCAAATCAGCTaGCTTGCTCCAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRLQQIS*LAPTLW
Trigger: CCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAG...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCACACGGGATAAGAGGTaGAGGCTGGTGTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGATRDKR*RLVCWG
Trigger: GCCCCAGCACACCAGCCTGCACCTCTTATCCCGTGT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTAAGAGCCTGTTGCTGCTaGAAGTGCAGCAGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLRACCC*KCSSSA
Trigger: CGCAGAGCTGCTGCACTTCCAGCAGCAACAGGCTCT...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCTGGGGCAGGTCTGTTaGGCAAACAGCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGALGQVC*ANSCLR
Trigger: CCGCAAGCAGCTGTTTGCCCAACAGACCTGCCCCAG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACACAGGGTCTCACAGCCTaGCCACTTGCACTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTQGLTA*PLALSV
Trigger: CACGGAGAGTGCAAGTGGCCAGGCTGTGAGACCCTG...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGAGGTGTTTGATAAACTaGCCCAGGTCTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRRCLIN*PRSSHR
Trigger: CCTGTGTGAAGACCTGGGCCAGTTTATCAAACACCT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCGCTCCCTGTCATCTTTaGCGGTCTCCGCTTCTGATA +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSAPCHL*RSPLLI
Trigger: TATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGC...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACTGTTCTTCACCAGGGTaGGGCTCCCTGTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDCSSPG*GSLSSL
Trigger: CAAAGATGACAGGGAGCCCCACCCTGGTGAAGAACA...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTGTTCTTCACCAGGGTaGGGCTCCCTGTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWCSSPG*GSLSSL
Trigger: CAAAGATGACAGGGAGCCCCACCCTGGTGAAGAACA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCACGAGTTAGGAAAGTaGGGGCCTCTGGCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWHELGK*GPLARK
Trigger: TTTTCTGGCCAGAGGCCCCCACTTTCCTAACTCGTG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTGTTTCTTCTGGGGATaGAGGCACAGTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: RKRRRKGARVRKVGASGQCFFWG*RHSSST
Trigger: GGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGACACAGTGTGCCACGTaGGTGTGCACGCACACTAAT +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWTQCAT*VCTHTN
Trigger: ATTAGTGTGCGTGCACACCCACGTGGCACACTGTGT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACCCTTCTCCCAGCATTTaGCTGGAGAGTTCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDPSPSI*LESSSS
Trigger: ACTGCTGGAACTCTCCAGCCAAATGCTGGGAGAAGG...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CAA 72 bp TTTGCTAGAATCCACACTCCCAGCACGACGGGTGACTaGGTCCTAGAGAGGGGTCTGGAGAGCCCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FARIHTPSTTGD*VLERGLESPQE
Trigger: TTCCTGGGGGCTCTCCAGACCCCTCTCTAGGACCAAGTCACCCGTCGTGCTGGGAGTGTGGATTCTAGCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCATTCTGGGCCAGCTCTaGGGAGATGGGGGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAILGQL*GDGGAE
Trigger: TTCTGCTCCCCCATCTCCTCAGAGCTGGCCCAGAAT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTGGCAGGAGAATCACTTaGACCTGGGAGGCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSGRRIT*TWEAKV
Trigger: AACCTTTGCCTCCCAGGTTCAAGTGATTCTCCTGCC...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCACTTCCCTGCCCGTaGCACTTGCAGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASLPCP*HLQLSL
Trigger: CAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAACCGACACAGGCACCTaGACAGCAGAGGCAGACTGT +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTTDTGT*TAEADC
Trigger: ACAGTCTGCCTCTGCTGTGCAGGTGCCTGTGTCGGT...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGCAGAACTTGTCACTaGTTCTCCGACGGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASRTCH*FSDGLG
Trigger: GCCCAGCCCGTCGGAGAAGCAGTGACAAGTTCTGCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGAGGAGGGCTGCTGCTaGCGTTGCTGGGCAGCGGCT +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQEEGCC*RCWAAA
Trigger: AGCCGCTGCCCAGCAACGGCAGCAGCAGCCCTCCTC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGCAAATCAGCTGCCTTaGTCCAACACTCTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDANQLP*SNTLAR
Trigger: TCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTGTTTCTTCTGGGGATaGAGGCACAGTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSCFFWG*RHSSST
Trigger: GGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGCAGGTGGGGAATACATaGGGAGGGGGCGGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQQVGNT*GGGGGP
Trigger: GGGCCCTCCGCCCCCTCCCCATGTATTCCCCACCTG...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCAGATGGAGCCGACCTaGTTGTCTCCGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAQMEPT*LSPRQI
Trigger: AATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCATCCCGTTTCCGCCGTaGGCCCACTATGATGACCAT +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAIPFPP*AHYDDH
Trigger: ATGGTCATCATAGTGGGCTCACGGCGGAAACGGGAT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTGTTCCAGCAGTTTGGTaGTTTGTGGGAAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRVPAVW*FVGRVI
Trigger: AATCACCCTTCCCACAAATCACCAAACTGCTGGAAC...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCTGTGGCCCCGCCGCTaGTGCCATCGGCTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVELWPRR*CHRLAQ
Trigger: CTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTTGAGCAGGTGCTGCTaGTGCAACTGTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSLSRCC*CNCCIC
Trigger: GCAAATGCAACAGTTGCAGCAGCAGCACCTGCTCAA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCGGTCATCCAGGGCGTaGTCTGTGTTGAGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARSSRA*SVLRCL
Trigger: CAAACACCTCAACACAGAGCACGCCCTGGATGACCG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTGGATCTCCAGCTGCTaGACCACCTGCATCTGTACC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAWISSC*TTCICT
Trigger: GGTACAGATGCAGGTGGTGCAGCAGCTGGAGATCCA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTTGCTCCAACACTCTaGCAAGAACTTGGATTTCAA +
Preference number: 4 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLAPTL*QELGFQ
Trigger: TTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAGCCTGGAAGGACACCTaGGAATGGGTGTGGATGTCT +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTAWKDT*EWVWMS
Trigger: AGACATCCACACCCATTCCCAGGTGTCCTTCCAGGC...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTAAATACACTCTTCCCTaGGCCTTGTCCCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSKYTLP*ALSLGT
Trigger: TGTCCCTAGGGACAAGGCCCAGGGAAGAGTGTATTT...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTTTAAACAGTATCTGGTaGGGAGACTCTGAGACCAAG +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASLNSIW*GDSETK
Trigger: CTTGGTCTCAGAGTCTCCCCACCAGATACTGTTTAA...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGTCCCAGCACGACGGGTaGCTTGGTCCTAGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQSQHDG*LGPREG
Trigger: CCCCTCTCTAGGACCAAGTCACCCGTCGTGCTGGGA...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACACCCCTTTGTATAGGTTaGATGATCCCGTTTCCGCCG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTPLCIG*MIPFPP
Trigger: CGGCGGAAACGGGATCATTCAACCTATACAAAGGGG...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTGATTTGTGGGAAGGGTaGTTGACTCCAGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSDLWEG*LTPVQL
Trigger: AAGCTGAACTGGAGTCAATCACCCTTCCCACAAATC...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGAAAGCGGGGCGAGTaGGCGACAGACAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARKRGE*ATDRNR
Trigger: TCTATTTCTGTCTGTCGCTCACTCGCCCCGCTTTCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGAACCCCGCCGGGGCATaGCACTTTGTGGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQNPAGA*HFVGCL
Trigger: CAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTT...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGCCATTCTGACCAGATaGAGCCGACCTGATTGTCTC +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAAILTR*SRPDCL
Trigger: GAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTGTCCGTACAGGGGGTaGGAGCCGGGGGTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVECPYRG*EPGVSS
Trigger: CGAGGAGACCCCCGGCTCCCACCCCCTGTACGGACA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCGGCGTTCTTCCAGGTaGCAGTGTTTCTGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARRSSR*QCFCGN
Trigger: ATTTCCGCAGAAACACTGCCACCTGGAAGAACGCCG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGTGGCACAGACCTCTGTaGGTGAGGCGGTACCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQWHRPL*VRRYQA
Trigger: GGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCA...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
3UTR CAA 72 bp TTGGCCTCTTTCCTTGCAGCCTATCCAGGGTCCCCTTaGTATAGGTTGAATGATCCCGTTTCCGCCGTGAGC +
Preference number: 4 (lower is better)
Translates to: LASFLAAYPGSP*YRLNDPVSAVS
Trigger: GCTCACGGCGGAAACGGGATCATTCAACCTATACAAAGGGGACCCTGGATAGGCTGCAAGGAAAGAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTGGTTCAGTGGCTGGCTaGAGGGCTTGGGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSGSVAG*RAWAPR
Trigger: CCTCGGAGCCCAAGCCCTTCAGCCAGCCACTGAACC...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307972.10
CDS-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCTCAGGCCTGAGGCCTaGTGCAGCAGGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVELRPEA*CSRNCR
Trigger: CCGGCAGTTCCTGCTGCAGCAGGCCTCAGGCCTGAG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGAGCATGAGGGCTTGCTaGTGCTGGAGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQSMRAC*CWSKAC
Trigger: GCAGGCCTTGCTCCAGCAGCAGCAAGCCCTCATGCT...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTGCAACTGTTGCATTTaGAGGAGCTGCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGACNCCI*RSCCWK
Trigger: CTTCCAGCAGCAGCTCCTGCAAATGCAACAGTTGCA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACATGCAACTGTTGCATTTaGAGGAGCTGCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTCNCCI*RSCCWK
Trigger: CTTCCAGCAGCAGCTCCTGCAAATGCAACAGTTGCA...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGTAGCTGGCATTAAGTaGTCCATAGCTGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAVAGIK*SIAEAR
Trigger: TCTGGCCTCAGCTATGGAGCACTTAATGCCAGCTAC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR GCA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTCGTTTAATATTTCTGTaGTGGTCAAACGGAACACAG +
Preference number: 4 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASRLIFL*WSNGTQ
Trigger: CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACG...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTGCACCCACGTCATCGTaGCTGAGGGGCAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSAPTSS*LRGSRL
Trigger: CAGCCTGCTGCCCCTCAGCCACGATGACGTGGGTGC...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATTAATATTTCTGTGCTaGTCAAACGGAACACAGGTG +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGLIFLC*SNGTQV
Trigger: CACCTGTGTTCCGTTTGACCAGCACAGAAATATTAA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACATTTGGCTTAGCAGCTTaGCCCTTGGCCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTFGLAA*PLASFL
Trigger: AAGGAAAGAGGCCAAGGGCCAAGCTGCTAAGCCAAA...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTTGCAGGCTGGTGTGCTaGGGCTGGGGGAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSCRLVC*GWGRCQ
Trigger: CTGACACCTCCCCCAGCCCCAGCACACCAGCCTGCA...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCTTTTTAAACAGTATCTaGTGGGGAGACTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSFLNSI*WGDSET
Trigger: GGTCTCAGAGTCTCCCCACCAGATACTGTTTAAAAA...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGATTTGTGGGAAGGGTaGTTGACTCCAGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FTVRKRRRKGARVRKVGADLWEG*LTPVQL
Trigger: AAGCTGAACTGGAGTCAATCACCCTTCCCACAAATC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAGTTCCAGCAGTTTGGTaGTTTGTGGGAAGGGTGATT +
Preference number: 4 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTVPAVW*FVGRVI
Trigger: AATCACCCTTCCCACAAATCACCAAACTGCTGGAAC...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTGCTGCAGCAGGAACTaGCGGGCCACTTGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVECCSRN*RATWRA
Trigger: GGCTCTCCAAGTGGCCCGGCAGTTCCTGCTGCAGCA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTGGTTTCCCAGCCTGCTaGTGGGTGAGGAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSGFPAC*WVRSCR
Trigger: CCTGCAGCTCCTCACCCAGCAGCAGGCTGGGAAACC...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTACCAGCCCCTGCCTCTaGAGGTTGAGCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSTSPCL*RLSRCC
Trigger: GCAGCACCTGCTCAACCTGCAGAGGCAGGGGCTGGT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCGTTTAATATTTCTGTaGTGGTCAAACGGAACACAG +
Preference number: 4 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWRLIFL*WSNGTQ
Trigger: CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATTGCATTGTAGAGAATaGCATTGTCCACAGATTACA +
Preference number: 4 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGLHCRE*HCPQIT
Trigger: TGTAATCTGTGGACAATGGCATTCTCTACAATGCAA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCCGGGGGTCTCCTCGTaGGAAGAGCTGTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEPGVSS*EELSLR
Trigger: TCGGAGAGACAGCTCTTCCCACGAGGAGACCCCCGG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTCCTTCACCTGCACCTaGTGGCTGTACTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVESFTCT*WLYWGG
Trigger: CCCGCCCCAGTACAGCCACCAGGTGCAGGTGAAGGA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGGGGGCTGTTTCTTCTaGGGATGGAGGCACAGTTCC +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQGGCFF*GWRHSS
Trigger: GGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTAGAACCCTGCGGCGGTaGTCCTCTCCATCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSRTLRR*SSPSLQ
Trigger: CTGCAGGGATGGAGAGGACCACCGCCGCAGGGTTCT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGCCTCTCGAGGTACCATaGGGGACAGGGAATTCACCC +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQPLEVP*GTGNSP
Trigger: GGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTTTTTTAAACAGTATCTaGTGGGGAGACTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSFLNSI*WGDSET
Trigger: GGTCTCAGAGTCTCCCCACCAGATACTGTTTAAAAA...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTAGCATGAGGGCTTGCTaGTGCTGGAGCAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSSMRAC*CWSKAC
Trigger: GCAGGCCTTGCTCCAGCAGCAGCAAGCCCTCATGCT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTTTGCATTGTAGAGAATaGCATTGTCCACAGATTACA +
Preference number: 4 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRLHCRE*HCPQIT
Trigger: TGTAATCTGTGGACAATGGCATTCTCTACAATGCAA...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTCGCCCTTCCACAGCTaGGGCAGGTCTGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVESPFHS*GRSVGQ
Trigger: TTGCCCAACAGACCTGCCCCAGCTGTGGAAGGGCGA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTCTCTCCTTGGCGAGCTaGATCTCCAGCTGCTGCACC +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSLSLAS*ISSCCT
Trigger: GGTGCAGCAGCTGGAGATCCAGCTCGCCAAGGAGAG...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGGGTGGGAGCTGGGGTaGAGAGTTCTTTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQGWELG*RVLSSQ
Trigger: CTGTGAAGAAAGAACTCTCCACCCCAGCTCCCACCC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTACTTGCTCCAACACTCTaGCAAGAACTTGGATTTCAA +
Preference number: 4 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLLAPTL*QELGFQ
Trigger: TTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAG...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTGCAGAGACGGTCACTaGCTGGCTGAAGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVECRDGH*LAEGLG
Trigger: CCCAAGCCCTTCAGCCAGCCAGTGACCGTCTCTGCA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373063.7
3UTR CAA 72 bp GGTGGTCCTCTCCATCCCTGCAGCAAATCAGCTGCCTaGCTCCAACACTCTGGCAAGAACTTGGATTTCAAA +
Preference number: 4 (lower is better)
Translates to: GGPLHPCSKSAA*LQHSGKNLDFK
Trigger: TTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCTGCAGGGATGGAGAGGACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTCACTTCCCTGCCCGTaGCACTTGCAGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVESLPCP*HLQLSL
Trigger: CAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTCCTGGGACTCCTTTCTaGCCTCAAGGAGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSPGTPF*PQGGSV
Trigger: GACACTCCCTCCTTGAGGGCAGAAAGGAGTCCCAGG...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGAGAGGATTAGGGCTGTaGTGGAGCAGGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVERGLGL*WSRPAE
Trigger: CTCTGCAGGCCTGCTCCACCACAGCCCTAATCCTCT...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGCTGGGGCAGGTCTGTTaGGCAAACAGCTTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVELGQVC*ANSLRK
Trigger: CTTCCGCAAGCTGTTTGCCCAACAGACCTGCCCCAG...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373063.7
CDS-3UTR GCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGACTTGGAGAGCCTGTTaGTGCTGGAAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVETWRAC*CWKCSS
Trigger: GCTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGT...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR GCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTCTGCTTGTTCCCCAGTaGCTCTTTGGGCTGCGGTTT +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSLLVPQ*LFGLRF
Trigger: AAACCGCAGCCCAAAGAGGCACTGGGGAACAAGCAG...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTACTCCTGTAGCTGCTaGAGCATGAGGGCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEYSCSC*SMRACC
Trigger: GCAGCAAGCCCTCATGCTCCAGCAGCTACAGGAGTA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTACCTGGGAATGGGTGTaGATGTCTCCAGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSTWEWV*MSPELV
Trigger: CACCAGCTCTGGAGACATCCACACCCATTCCCAGGT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGAGGTGTTTGATAAACTaGCCCAGGTCTTCACACAGG +
Preference number: 4 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQRCLIN*PRSSHR
Trigger: CCTGTGTGAAGACCTGGGCCAGTTTATCAAACACCT...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGAGCAGGCCTGCAGAGTaGATGAAGGTGAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVESRPAE*MKVRQR
Trigger: TCTCTGTCTCACCTTCATCCACTCTGCAGGCCTGCT...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR TCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTTGTGGGAAGGGTGATTaGCTCCAGTTCAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSCGKGD*LQFSFL
Trigger: GAGAAAGCTGAACTGGAGTCAATCACCCTTCCCACA...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTAAATACACTCTTCCCTaGGCCTTGTCCCTAGGGACA +
Preference number: 4 (lower is better)
Translates to: QISCLAPTLWQELGFQTSKYTLP*ALSLGT
Trigger: TGTCCCTAGGGACAAGGCCCAGGGAAGAGTGTATTT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CCA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTTAATATTTCTGTGCTaGTCAAACGGAACACAGGTG +
Preference number: 4 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVELIFLC*SNGTQV
Trigger: CACCTGTGTTCCGTTTGACCAGCACAGAAATATTAA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS GCA 90 bp ACCGCCGCGCGCCTCAACCCCGCCGGGGCATGGCACTTTGTGGGCTaGTTGGCTCGCTCCGGCTCCGCTCTTCCTTCCCGGTCCTTCCGC +
Preference number: 5 (lower is better)
Translates to: TAARLNPAGAWHFVG*LARSGSALPSRSFR
Trigger: GCGGAAGGACCGGGAAGGAAGAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTTGAGGCGCGCGGCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS CCA 90 bp CCGCGCGCCTCAACCCCGCCGGGGCATGGCACTTTGTGGGCTGCTTaGCTCGCTCCGGCTCCGCTCTTCCTTCCCGGTCCTTCCGCGACG +
Preference number: 5 (lower is better)
Translates to: PRASTPPGHGTLWAA*LAPAPLFLPGPSAT
Trigger: CGTCGCGGAAGGACCGGGAAGGAAGAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTTGAGGCGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCACAGCGACCCTCACGTaGCTGCTGCTCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: VGGGSGARWACSHGPPQGTATLT*LLLCPG
Trigger: GCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTGT...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS TCA 90 bp GCAGCAGGCTGCTGGCGGAGCCAGGGTTCAGCATGCCAGGGCTGTTaGGGAGGGGGAAGCTGCTCTCGGCCAGGGCGGCCTGGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: AAGCWRSQGSACQGC*GGGSCSRPGRPGSW
Trigger: CCAGCTACCAGGCCGCCCTGGCCGAGAGCAGCTTCCCCCTCCTCAACAGCCCTGGCATGCTGAACCCTGGCTCCGCCAGCAGCCTGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCTCCAGCCCCTCCTGCTaGACGCTGTCCTCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPSSPSC*TLSSAG
Trigger: GCCTGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGA...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 90 bp GGCTTGGGCTCCGAGGGCCGCATGTGCAGGTGGGCCATCATGGCCTaGAGCCGCTCGCTCTCCTTGGCGAGCTGGATCTCCAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GLGSEGRMCRWAIMA*SRSLSLASWISSCC
Trigger: GCAGCAGCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGCACATGCGGCCCTCGGAGCCCAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 90 bp ACGGTCACTGGCTGGCTGAAGGGCTTGGGCTCCGAGGGCCGCATGTaGAGGTGGGCCATCATGGCCTGCAGCCGCTCGCTCTCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: TVTGWLKGLGSEGRM*RWAIMACSRSLSLA
Trigger: CGCCAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGCACATGCGGCCCTCGGAGCCCAAGCCCTTCAGCCAGCCAGTGACCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000409208.5
CDS CCA 90 bp CACCCGTGGTCACTTCCCTGCCCGTGCCACTTGCAGTTGTCCCTGTaGCCCCGCCGCTGCTGCCATCGGCTTGCCCAGAGAGGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: HPWSLPCPCHLQLSL*PRRCCHRLAQRGCP
Trigger: TGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 90 bp CTGTCCTCGGCAGGCTGCCCGGGGGCACCCTCGCCCTTCCACAGCTaGGGCAGGTCTGTTGGGCAAACAGCTGCTTGCGGAAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LSSAGCPGAPSPFHS*GRSVGQTAACGRVW
Trigger: CCAGACCCTTCCGCAAGCAGCTGTTTGCCCAACAGACCTGCCCCAGCTGTGGAAGGGCGAGGGTGCCCCCGGGCAGCCTGCCGAGGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS CCA 90 bp AGTGGCTGGCTGAAGGGCTTGGGCTCCGAGGGCCGCATGTGCAGGTaGGCCATCATGGCCTGCAGCCGCTCGCTCTCCTTGGCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SGWLKGLGSEGRMCR*AIMACSRSLSLASW
Trigger: CCAGCTCGCCAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGCACATGCGGCCCTCGGAGCCCAAGCCCTTCAGCCAGCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS CCA 90 bp CTGTCCTCGGCAGGCTGCCCGGGGGCACCCTCGCCCTTCCACAGCTaGGGCAGGTCTGTTGGGCAAACAGCTTGCGGAAGGGTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LSSAGCPGAPSPFHS*GRSVGQTACGRVWR
Trigger: CCTCCAGACCCTTCCGCAAGCTGTTTGCCCAACAGACCTGCCCCAGCTGTGGAAGGGCGAGGGTGCCCCCGGGCAGCCTGCCGAGGACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000670130.1
CDS CCA 90 bp ACTGGCTGGCTGAAGGGCTTGGGCTCCGAGGGCCGCATGTGCAGGTaGGCCATCATGGCCTGCAGCCGCTCGCTCTCCTTGGCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: TGWLKGLGSEGRMCR*AIMACSRSLSLASW
Trigger: CCAGCTCGCCAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGCACATGCGGCCCTCGGAGCCCAAGCCCTTCAGCCAGCCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000409208.5
CDS CCA 90 bp CGGCCACCCCCTCCCAGGGCCTGTCAGCCCCTGGAGCTGTCGTTGTaGCGTCTGCAGCTGCAGTGTCTCTGCTCCCGGCCCAGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: RPPPPRACQPLELSL*RLQLQCLCSRPSFH
Trigger: ATGGAAGCTGGGCCGGGAGCAGAGACACTGCAGCTGCAGACGCCACAACGACAGCTCCAGGGGCTGACAGGCCCTGGGAGGGGGTGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000670130.1
CDS-3UTR CAA 90 bp GTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCCACAGGGCTTGTGCAGGCTGAGGTaGTGGCGCACGGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VGGGSGARWACSHGPPQGLCRLR*WRTAFF
Trigger: GAAGAACGCCGTGCGCCACAACCTCAGCCTGCACAA...GCCCTGTGGGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 90 bp CTTCCCTGCCCGTGCCACTTGCAGTTGTCCCTGTGGCCCCGCCGCTaGTGCCATCGGCTTGCCCAGAGAGGCTGCCCACGCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: LPCPCHLQLSLWPRR*CHRLAQRGCPRHSD
Trigger: GTCAGAATGGCGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCCGTGCCACTTGCAGTaGTCCCTGTGGCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRPCHLQ*SLWPRR
Trigger: GCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGAACTGCCGGGCCACTaGGAGAGCCTGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPELPGH*ESLLLL
Trigger: CAGCAGCAACAGGCTCTCCAAGTGGCCCGGCAGTTC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGGCCCCGAGGCTTGGTaGGGCTGCAGGCTGACCAGC +
Preference number: 5 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRGPEAW*GCRLTS
Trigger: GCTGGTCAGCCTGCAGCCCAACCAAGCCTCGGGGCC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 90 bp ACCATTGCTGTCTGCACCCGTGGTCACTTCCCTGCCCGTGCCACTTaGAGTTGTCCCTGTGGCCCCGCCGCTGCTGCCATCGGCTTGCCC +
Preference number: 5 (lower is better)
Translates to: TIAVCTRGHFPARAT*SCPCGPAAAAIGLP
Trigger: GGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGCTGCTGCCATCGGCTaGCCCAGAGAGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAAAAIG*PREAAH
Trigger: GTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTCCGTGCCACTTGCAGTaGTCCCTGTGGCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASPCHLQ*SLWPRR
Trigger: GCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGG...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGACCGTGCCACTTGCAGTaGTCCCTGTGGCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGPCHLQ*SLWPRR
Trigger: GCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGG...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCACAGTAGGCTGTCCGTaGGGCAGGGTATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPTVGCP*GRVWWE
Trigger: CTCCCACCATACCCTGCCCAACGGACAGCCTACTGT...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 90 bp CGGGACTCATCTCACCATTGCTGTCTGCACCCGTGGTCACTTCCCTaGCCGTGCCACTTGCAGTTGTCCCTGTGGCCCCGCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RDSSHHCCLHPWSLP*PCHLQLSLWPRRCC
Trigger: GCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCCCGGGGCATGGCACTTaGTGGGCTGCTTGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARAPGHGT*WAAWLA
Trigger: AGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGG...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGAACTGCCGGGCCACTaGGAGAGCCTGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLELPGH*ESLLLL
Trigger: CAGCAGCAACAGGCTCTCCAAGTGGCCCGGCAGTTC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTGGCCCCGAGGCTTGGTaGGGCTGCAGGCTGACCAGC +
Preference number: 5 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRGPEAW*GCRLTS
Trigger: GCTGGTCAGCCTGCAGCCCAACCAAGCCTCGGGGCC...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATCCAGCCCCTCCTGCTaGACGCTGTCCTCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGSSPSC*TLSSAG
Trigger: GCCTGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGGCTGGCTGAAGGGCTaGGGCTCCGAGGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWGWLKG*GSEGRM
Trigger: CATGCGGCCCTCGGAGCCCAAGCCCTTCAGCCAGCC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGGCTGGCTGAAGGGCTaGGGCTCCGAGGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: RKRRRKGARVRKVGASGQGWLKG*GSEGRM
Trigger: CATGCGGCCCTCGGAGCCCAAGCCCTTCAGCCAGCC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGTCCACACGGCACCCTaGACGTTCTCCACGCGGACG +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARAVHTAP*TFSTRT
Trigger: CGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGAC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGGCTGCTGCCATCGGCTaGCCCAGAGAGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: RKRRRKGARVRKVGASGQAAAIG*PREAAH
Trigger: GTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGC...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGGCTGCTGCCATCGGCTaGCCCAGAGAGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWAAAIG*PREAAH
Trigger: GTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGC...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTCTCAGGTTGGGGGCGGGTCTGGAGCCAGGTGGGCCTGCTCACACGGACCCCGCAGAGGCAGACTGTTaGCTGTCATTGTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: CLRLGAGLEPGGPAHTDPAEADC*LSLFPG
Trigger: CCCAGGGAACAATGACAGCAAACAGTCTGCCTCTGC...GGGGTCCGTGTGAGCAGGCCCACCTGGCTCCAGACCCGCCCCCAACCTGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTTCCCCAGTGCCTCTTaGGGCTGCGGTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRFPSAS*GCGFPA
Trigger: GGCTGGGAAACCGCAGCCCAAAGAGGCACTGGGGAA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGTGGGCAAACAGCTGCTaGCGGAAGGGTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRWANSC*RKGLEG
Trigger: CCCCTCCAGACCCTTCCGCAAGCAGCTGTTTGCCCA...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCTCCAGCCCCTCCTGCTaGACGCTGTCCTCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSSSPSC*TLSSAG
Trigger: GCCTGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGA...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTCCAGCCCCTCCTGCTaGACGCTGTCCTCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RKRRRKGARVRKVGASGQSSPSC*TLSSAG
Trigger: GCCTGCCGAGGACAGCGTCAAGCAGGAGGGGCTGGA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGAGCCGCTCGCTCTCCTaGGCGAGCTGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWSRSLS*ASWISS
Trigger: GCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGCT...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCGCAGAGACGGTCACCTaGGAGAATGAGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLAETVT*ENEEEP
Trigger: CGGCTCCTCCTCATTCTCCAAGGTGACCGTCTCTGC...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGTCCACACGGCACCCTaGACGTTCTCCACGCGGACG +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASVHTAP*TFSTRT
Trigger: CGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGAC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGTCCACACGGCACCCTaGACGTTCTCCACGCGGACG +
Preference number: 5 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWVHTAP*TFSTRT
Trigger: CGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGAC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GGCFFWGWRHSSSTQARASPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGTCCTTGGCCTTGAGTaGGGGGTCCCCCATAGGGGG +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASVLGLE*GVPHRG
Trigger: CCCCCTATGGGGGACCCCCAACTCAAGGCCAAGGAC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAACTCTTCCCTGGGCCTaGTCCCTAGGGACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPTLPWA*SLGTGL
Trigger: CAGGCCTGTCCCTAGGGACAAGGCCCAGGGAAGAGT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGACTCTTCCCTGGGCCTaGTCCCTAGGGACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRTLPWA*SLGTGL
Trigger: CAGGCCTGTCCCTAGGGACAAGGCCCAGGGAAGAGT...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS TCA 90 bp CCGCTGCTGCCATCGGCTTGCCCAGAGAGGCTGCCCACGCCATTCTaGCCAGATGGAGCCGACCTGATTGTCTCCGAGGCAGATTCCACC +
Preference number: 5 (lower is better)
Translates to: PLLPSACPERLPTPF*PDGADLIVSEADST
Trigger: GGTGGAATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 90 bp GCAGCAGCTCTGCGGGACTCATCTCACCATTGCTGTCTGCACCCGTaGTCACTTCCCTGCCCGTGCCACTTGCAGTTGTCCCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: AAALRDSSHHCCLHP*SLPCPCHLQLSLWP
Trigger: GGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCGCAGAGCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTCACTTTGTGGGCTGCTaGGCTCGCTCCGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRHFVGC*ARSGSA
Trigger: AGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTG...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCCGGGGCATGGCACTTaGTGGGCTGCTTGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWPGHGT*WAAWLA
Trigger: AGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTTTCCCCAGTGCCTCTTaGGGCTGCGGTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASFPSAS*GCGFPA
Trigger: GGCTGGGAAACCGCAGCCCAAAGAGGCACTGGGGAA...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTGGAAGGCCAGCTGCTaGTTCCCCAGTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLWKASC*FPSASL
Trigger: CAAAGAGGCACTGGGGAACAAGCAGCTGGCCTTCCA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGGGCAAACAGCTGCTaGCGGAAGGGTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGWANSC*RKGLEG
Trigger: CCCCTCCAGACCCTTCCGCAAGCAGCTGTTTGCCCA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAACAGTAGGCTGTCCGTaGGGCAGGGTATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPTVGCP*GRVWWE
Trigger: CTCCCACCATACCCTGCCCAACGGACAGCCTACTGT...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCACAGTAGGCTGTCCGTaGGGCAGGGTATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARATVGCP*GRVWWE
Trigger: CTCCCACCATACCCTGCCCAACGGACAGCCTACTGT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGAGCCGCTCGCTCTCCTaGGCGAGCTGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWSRSLS*ASWISS
Trigger: GCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGCT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGCAGAGACGGTCACCTaGGAGAATGAGGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAAETVT*ENEEEP
Trigger: CGGCTCCTCCTCATTCTCCAAGGTGACCGTCTCTGC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373057.7
CDS-3UTR CAA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCATTGTGCAGGCTGAGGTaGTGGCGCACGGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GGCFFWGWRHSSSTQARALCRLR*WRTAFF
Trigger: GAAGAACGCCGTGCGCCACAACCTCAGCCTGCACAA...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGSPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCAGCACGACGGGTGACTaGGTCCTAGAGAGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARASTTGD*VLERGL
Trigger: CAGACCCCTCTCTAGGACCAAGTCACCCGTCGTGCT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGGTCCTTGGCCTTGAGTaGGGGGTCCCCCATAGGGGG +
Preference number: 5 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWVLGLE*GVPHRG
Trigger: CCCCCTATGGGGGACCCCCAACTCAAGGCCAAGGAC...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGCCCAGTCCTTGGCCTaGAGTTGGGGGTCCCCCATA +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASAQSLA*SWGSPI
Trigger: TATGGGGGACCCCCAACTCAAGGCCAAGGACTGGGC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGCGATACGCCCAGTCCTaGGCCTTGAGTTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWRYAQS*ALSWGS
Trigger: GGACCCCCAACTCAAGGCCAAGGACTGGGCGTATCG...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTAGCAGCTTGGCCCTaGGCCTCTTTCCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLLAAWP*ASFLAA
Trigger: GGCTGCAAGGAAAGAGGCCAAGGGCCAAGCTGCTAA...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGCTGGGGCAGGTCTGTaGGGCAAACAGCTTGCGGAA +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARAAGAGL*GKQLAE
Trigger: TTCCGCAAGCTGTTTGCCCAACAGACCTGCCCCAGC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373063.7
CDS CCA 90 bp CCAGCAGCTGGTATGAACTGGTGTGATGTCCGTAAGCCTCCCCTCTaGAGAGTGCGGGCCCCAACTCTCCCTCCATGCCATGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PAAGMNWCDVRKPPL*RVRAPTLPPCHGSS
Trigger: GGAGGAGCCATGGCATGGAGGGAGAGTTGGGGCCCGCACTCTCCAGAGGGGAGGCTTACGGACATCACACCAGTTCATACCAGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451305.1
CDS-3UTR CAA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACACCGTGCCACTTGCAGTaGTCCCTGTGGCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTPCHLQ*SLWPRR
Trigger: GCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGG...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGCACTTGGAGAGCCTGTaGCTGCTGGAAGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRHLESL*LLEVQQ
Trigger: CTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGTG...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCACACTTGGAGAGCCTGTaGCTGCTGGAAGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAHLESL*LLEVQQ
Trigger: CTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGTG...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGATCTGCTGCATCTGTaGCGGGGTAAGCATCTGCGG +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARADLLHL*RGKHLR
Trigger: CCGCAGATGCTTACCCCGCAACAGATGCAGCAGATC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGATCTGCTGCATCTGTaGCGGGGTAAGCATCTGCGG +
Preference number: 5 (lower is better)
Translates to: GLFLLGMEAQFLHPGQGRDLLHL*RGKHLR
Trigger: CCGCAGATGCTTACCCCGCAACAGATGCAGCAGATC...CCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTTTCCCCAGTGCCTCTTaGGGCTGCGGTTTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRFPSAS*GCGFPA
Trigger: GGCTGGGAAACCGCAGCCCAAAGAGGCACTGGGGAA...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGGCCCCGAGGCTTGGTaGGGCTGCAGGCTGACCAGC +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAGPEAW*GCRLTS
Trigger: GCTGGTCAGCCTGCAGCCCAACCAAGCCTCGGGGCC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCTGGGCAAACAGCTGCTaGCGGAAGGGTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSWANSC*RKGLEG
Trigger: CCCCTCCAGACCCTTCCGCAAGCAGCTGTTTGCCCA...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307972.10
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGGCTGGCTGAAGGGCTaGGGCTCCGAGGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAGWLKG*GSEGRM
Trigger: CATGCGGCCCTCGGAGCCCAAGCCCTTCAGCCAGCC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCATGGGGGAGCAGAACTaGTCACTGCTTCTCCGACGG +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARAMGEQN*SLLLRR
Trigger: CCGTCGGAGAAGCAGTGACAAGTTCTGCTCCCCCAT...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTTGTGCAGGCTGAGGTaGTGGCGCACGGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWLCRLR*WRTAFF
Trigger: GAAGAACGCCGTGCGCCACAACCTCAGCCTGCACAA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTGTCCACACGGCACCCTaGACGTTCTCCACGCGGACG +
Preference number: 5 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSVHTAP*TFSTRT
Trigger: CGTCCGCGTGGAGAACGTCAAGGGTGCCGTGTGGAC...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCAGGCTCCCTGTCATCTTaGGCGGTCTCCGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPGSLSS*AVSASD
Trigger: ATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGCC...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCGGCTCCCTGTCATCTTaGGCGGTCTCCGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARAGSLSS*AVSASD
Trigger: ATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGCC...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDSPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAAGCACGACGGGTGACTaGGTCCTAGAGAGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGSTTGD*VLERGL
Trigger: CAGACCCCTCTCTAGGACCAAGTCACCCGTCGTGCT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp AAGGAGGGAGTGTCCAGAAGGTGGCGTAAGACCAGTGAGAGCCGGGTGCAGTGGCGATACGCCCAGTCCTaGGCCTTGAGTTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: KEGVSRRWRKTSESRVQWRYAQS*ALSWGS
Trigger: GGACCCCCAACTCAAGGCCAAGGACTGGGCGTATCG...CCACTGCACCCGGCTCTCACTGGTCTTACGCCACCTTCTGGACACTCCCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTACAGCGACCCTCACGTaGCTGCTGCTCTGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSTATLT*LLLCPG
Trigger: GCCTGGGCAGAGCAGCAGCAACGTGAGGGTCGCTGT...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CCTGCAGAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCCTTTGGCTTAGCAGCTaGGCCCTTGGCCTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PAEAHLAQTSVGEAVPGLLWLSS*ALGLFP
Trigger: AGGAAAGAGGCCAAGGGCCAAGCTGCTAAGCCAAAG...GAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS GCA 90 bp CTGGAAGTGCAGCAGCTCTGCGGGACTCATCTCACCATTGCTGTCTaGACCCGTGGTCACTTCCCTGCCCGTGCCACTTGCAGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: LEVQQLCGTHLTIAV*TRGHFPARATCSCP
Trigger: GGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 90 bp GTTGCTGCTGGAAGTGCAGCAGCTCTGCGGGACTCATCTCACCATTaGTGTCTGCACCCGTGGTCACTTCCCTGCCCGTGCCACTTGCAG +
Preference number: 5 (lower is better)
Translates to: VAAGSAAALRDSSHH*CLHPWSLPCPCHLQ
Trigger: CTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTCCAGCAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGGACTCATCTCACCATaGCTGTCTGCACCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGGLISP*LSAPVV
Trigger: GACCACGGGTGCAGACAGCAATGGTGAGATGAGTCC...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGCAGAGGCAGACTGTTaGCTGTCATTGTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GGCFFWGWRHSSSTQARAAEADC*LSLFPG
Trigger: CCCAGGGAACAATGACAGCAAACAGTCTGCCTCTGC...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTTGGAAGGCCAGCTGCTaGTTCCCCAGTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASWKASC*FPSASL
Trigger: CAAAGAGGCACTGGGGAACAAGCAGCTGGCCTTCCA...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GAAGCGCACCTGGCACAGACCTCTGTGGGTGAGGCGGTACCAGGCCTCTTCCCACTGCTGCTGCAACTGTaGCATTTGCAGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EAHLAQTSVGEAVPGLFPLLLQL*HLQELL
Trigger: CAGCAGCTCCTGCAAATGCAACAGTTGCAGCAGCAG...TGGGAAGAGGCCTGGTACCGCCTCACCCACAGAGGTCTGTGCCAGGTGCGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGACAGTAGGCTGTCCGTaGGGCAGGGTATGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWTVGCP*GRVWWE
Trigger: CTCCCACCATACCCTGCCCAACGGACAGCCTACTGT...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAATGGGGGAGCAGAACTaGTCACTGCTTCTCCGACGG +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGMGEQN*SLLLRR
Trigger: CCGTCGGAGAAGCAGTGACAAGTTCTGCTCCCCCAT...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTTGTGCAGGCTGAGGTaGTGGCGCACGGCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: RKRRRKGARVRKVGASGQLCRLR*WRTAFF
Trigger: GAAGAACGCCGTGCGCCACAACCTCAGCCTGCACAA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGGCTCCCTGTCATCTTaGGCGGTCTCCGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWGSLSS*AVSASD
Trigger: ATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGCC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTAGTCCTGGACTTGCCTaGAGGCTCGGGAGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSSPGLA*RLGRGC
Trigger: ACAGCCCCTCCCGAGCCTCAAGGCAAGTCCAGGACT...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TCCCTGCCCCTACGTGTTTTTGTCAGGTCACACTGGGAGCTGCTGGCCCGGGCCTGCCCCTACGTGTTTTaGTCAGGTCACACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: SLPLRVFVRSHWELLARACPYVF*SGHTGS
Trigger: GCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCA...GGCCCGGGCCAGCAGCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCATCCAGGCAGCCCCCTaGAAGACGTGGACAATGGGC +
Preference number: 5 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSIQAAP*KTWTMG
Trigger: GCCCATTGTCCACGTCTTCAAGGGGGCTGCCTGGAT...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTATCCAGGCAGCCCCCTaGAAGACGTGGACAATGGGC +
Preference number: 5 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRIQAAP*KTWTMG
Trigger: GCCCATTGTCCACGTCTTCAAGGGGGCTGCCTGGAT...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS TCA 90 bp GCCCAGAGAGGCTGCCCACGCCATTCTGACCAGATGGAGCCGACCTaGTTGTCTCCGAGGCAGATTCCACCATCATGTCGCTCTAGCGGT +
Preference number: 5 (lower is better)
Translates to: AQRGCPRHSDQMEPT*LSPRQIPPSCRSSG
Trigger: ACCGCTAGAGCGACATGATGGTGGAATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 90 bp GCCATCGGCTTGCCCAGAGAGGCTGCCCACGCCATTCTGACCAGATaGAGCCGACCTGATTGTCTCCGAGGCAGATTCCACCATCATGTC +
Preference number: 5 (lower is better)
Translates to: AIGLPREAAHAILTR*SRPDCLRGRFHHHV
Trigger: GACATGATGGTGGAATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGCAAGCCGATGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCACTTTGTGGGCTGCTaGGCTCGCTCCGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAHFVGC*ARSGSA
Trigger: AGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCACTTGGAGAGCCTGTaGCTGCTGGAAGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWHLESL*LLEVQQ
Trigger: CTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGTG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGTGGAAGGCCAGCTGCTaGTTCCCCAGTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWWKASC*FPSASL
Trigger: CAAAGAGGCACTGGGGAACAAGCAGCTGGCCTTCCA...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTGGAAGGCCAGCTGCTaGTTCCCCAGTGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: RKRRRKGARVRKVGASGQWKASC*FPSASL
Trigger: CAAAGAGGCACTGGGGAACAAGCAGCTGGCCTTCCA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTCTGCTGCTGCAACTGTaGCATTTGCAGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASLLLQL*HLQELL
Trigger: CAGCAGCTCCTGCAAATGCAACAGTTGCAGCAGCAG...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGCCGCTCGCTCTCCTaGGCGAGCTGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASRSLS*ASWISS
Trigger: GCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CTGGGCACTACACACACACACGCCTATCCAGGCAGCCCCCTTGAAGACGTGGACGGCTCCCTGTCATCTTaGGCGGTCTCCGCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LGTTHTHAYPGSPLEDVDGSLSS*AVSASD
Trigger: ATCAGAAGCGGAGACCGCCAAAGATGACAGGGAGCC...GTCCACGTCTTCAAGGGGGCTGCCTGGATAGGCGTGTGTGTGTGTAGTGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGATGCCCCTACGTGTTTTaGTCAGGTCACACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: FLLGMEAQFLHPGQGRVGCPYVF*SGHTGS
Trigger: GCTCCCAGTGTGACCTGACAAAAACACGTAGGGGCA...TCCCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp ATGGTCCTACTGCTTCAGGATGCCACCACCACACCTGGGCACTACACACACACAGAACTGCCGGGCCACTaGGAGAGCCTGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MVLLLQDATTTPGHYTHTELPGH*ESLLLL
Trigger: CAGCAGCAACAGGCTCTCCAAGTGGCCCGGCAGTTC...TGTGTGTGTGTAGTGCCCAGGTGTGGTGGTGGCATCCTGAAGCAGTAGGACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCTGCTGCTGCAACTGTaGCATTTGCAGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWLLLQL*HLQELL
Trigger: CAGCAGCTCCTGCAAATGCAACAGTTGCAGCAGCAG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGGGGCTGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAAGGGCGTGCTCTGTGTaGAGGTGTTTGATAAACTGG +
Preference number: 5 (lower is better)
Translates to: GGCFFWGWRHSSSTQARARACSV*RCLINW
Trigger: CCAGTTTATCAAACACCTCAACACAGAGCACGCCCT...TGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp GGTCTGAACCCTCCGTGTCCTCTACTGGTCCAAGACCAGGGGTTGTGTCCCTGGCTTTGGCTTAGCAGCTaGGCCCTTGGCCTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GLNPPCPLLVQDQGLCPWLWLSS*ALGLFP
Trigger: AGGAAAGAGGCCAAGGGCCAAGCTGCTAAGCCAAAG...CCAGGGACACAACCCCTGGTCTTGGACCAGTAGAGGACACGGAGGGTTCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GATGTCTCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCTGCTGCTGCAACTGTaGCATTTGCAGGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DVSRAGGTGKRTLRRWSSLLLQL*HLQELL
Trigger: CAGCAGCTCCTGCAAATGCAACAGTTGCAGCAGCAG...AGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGAGACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGGCCCCGAGGCTTGGTaGGGCTGCAGGCTGACCAGC +
Preference number: 5 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQGPEAW*GCRLTS
Trigger: GCTGGTCAGCCTGCAGCCCAACCAAGCCTCGGGGCC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCCTTGGCCTCTTTCCTaGCAGCCTATCCAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAPWPLS*QPIQGP
Trigger: GGGACCCTGGATAGGCTGCAAGGAAAGAGGCCAAGG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGGAGAGTTCCAGCAGTTaGGTGATTTGTGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWESSSS*VICGKG
Trigger: ACCCTTCCCACAAATCACCAAACTGCTGGAACTCTC...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CTGGGGGAGGTGTCAGGGGCCATCTTTGGCTTAGCAGCTTGGCCCTTGGCCTCTGAGAGTTCCAGCAGTTaGGTGATTTGTGGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: LGEVSGAIFGLAAWPLASESSSS*VICGKG
Trigger: ACCCTTCCCACAAATCACCAAACTGCTGGAACTCTC...AGAGGCCAAGGGCCAAGCTGCTAAGCCAAAGATGGCCCCTGACACCTCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGCTGCTGCCATCGGCTaGCCCAGAGAGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQAAAIG*PREAAH
Trigger: GTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGGACTCATCTCACCATaGCTGTCTGCACCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAGLISP*LSAPVV
Trigger: GACCACGGGTGCAGACAGCAATGGTGAGATGAGTCC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCACTTGGAGAGCCTGTaGCTGCTGGAAGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAHLESL*LLEVQQ
Trigger: CTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGTG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGAGGGCGTGCTCTGTGTaGAGGTGTTTGATAAACTGG +
Preference number: 5 (lower is better)
Translates to: RKRRRKGARVRKVGASGQRACSV*RCLINW
Trigger: CCAGTTTATCAAACACCTCAACACAGAGCACGCCCT...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TGTTTCTTCTGGGGATGGAGGCACAGTTCCTCCACCCAGGCCAGGGCAGGGTGGTATCCAGGGTCCCCTTaGTATAGGTTGAATGATCCC +
Preference number: 5 (lower is better)
Translates to: CFFWGWRHSSSTQARAGWYPGSP*YRLNDP
Trigger: GGGATCATTCAACCTATACAAAGGGGACCCTGGATA...CCACCCTGCCCTGGCCTGGGTGGAGGAACTGTGCCTCCATCCCCAGAAGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTTAGCAGCTTGGCCCTaGGCCTCTTTCCTTGCAGCC +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGALAAWP*ASFLAA
Trigger: GGCTGCAAGGAAAGAGGCCAAGGGCCAAGCTGCTAA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGCACTTTGTGGGCTGCTaGGCTCGCTCCGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQHFVGC*ARSGSA
Trigger: AGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTG...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCGCAGAGGCAGACTGTTaGCTGTCATTGTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAAEADC*LSLFPG
Trigger: CCCAGGGAACAATGACAGCAAACAGTCTGCCTCTGC...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGGCCAGTCTGTGTTGAGGTGTTaGATAAACTGGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RKRRRKGARVRKVGASGQSVLRC*INWPRS
Trigger: AGACCTGGGCCAGTTTATCAAACACCTCAACACAGA...CTGGCCAGAGGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp TCCAGAGCTGGTGGCACAGGTAAAAGAACCCTGCGGCGGTGGTCCTCTCCATCCTCTGTGTTGAGGTGTTaGATAAACTGGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SRAGGTGKRTLRRWSSPSSVLRC*INWPRS
Trigger: AGACCTGGGCCAGTTTATCAAACACCTCAACACAGA...GGATGGAGAGGACCACCGCCGCAGGGTTCTTTTACCTGTGCCACCAGCTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGGGCTGGCTGAAGGGCTaGGGCTCCGAGGGCCGCATG +
Preference number: 5 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEGWLKG*GSEGRM
Trigger: CATGCGGCCCTCGGAGCCCAAGCCCTTCAGCCAGCC...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CCATGGTCACCACACAGTGTGCCACGTGGGTGTGCACGCACACTAATGGTCCTATCCCCTTTGTATAGGTaGAATGATCCCGTTTCCGCC +
Preference number: 5 (lower is better)
Translates to: PWSPHSVPRGCARTLMVLSPLYR*NDPVSA
Trigger: GGCGGAAACGGGATCATTCAACCTATACAAAGGGGA...TAGGACCATTAGTGTGCGTGCACACCCACGTGGCACACTGTGTGGTGACCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCAGGGCGTGCTCTGTGTaGAGGTGTTTGATAAACTGG +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGARACSV*RCLINW
Trigger: CCAGTTTATCAAACACCTCAACACAGAGCACGCCCT...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTAGCCGCTCGCTCTCCTaGGCGAGCTGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QISCLAPTLWQELGFQTSSRSLS*ASWISS
Trigger: GCTGGAGATCCAGCTCGCCAAGGAGAGCGAGCGGCT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGCCTTGGCCTCTTTCCTaGCAGCCTATCCAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQPWPLS*QPIQGP
Trigger: GGGACCCTGGATAGGCTGCAAGGAAAGAGGCCAAGG...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTCTGTGTTGAGGTGTTaGATAAACTGGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGASVLRC*INWPRS
Trigger: AGACCTGGGCCAGTTTATCAAACACCTCAACACAGA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS-3UTR CAA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTGCCCAGTCCTTGGCCTaGAGTTGGGGGTCCCCCATA +
Preference number: 5 (lower is better)
Translates to: QISCLAPTLWQELGFQTSAQSLA*SWGSPI
Trigger: TATGGGGGACCCCCAACTCAAGGCCAAGGACTGGGC...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CCTCTCGAGGTACCATGGGGGACAGGGAATTCACCCCAGGCCCTACACAAGCGTCACTCTGGCAAGAACTaGGATTTCAAACTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: PLEVPWGTGNSPQALHKRHSGKN*DFKLVK
Trigger: TTTCACTAGTTTGAAATCCAAGTTCTTGCCAGAGTG...ACGCTTGTGTAGGGCCTGGGGTGAATTCCCTGTCCCCCATGGTACCTCGAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCTATCCAGGGTCCCCTTaGTATAGGTTGAATGATCCC +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAYPGSP*YRLNDP
Trigger: GGGATCATTCAACCTATACAAAGGGGACCCTGGATA...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp GGCCCGGTGAATAGAGGACGTTTAATATTTCTGTGCTGGTCAAACGGAACACAGGCAGAGGCAGACTGTTaGCTGTCATTGTTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: GPVNRGRLIFLCWSNGTQAEADC*LSLFPG
Trigger: CCCAGGGAACAATGACAGCAAACAGTCTGCCTCTGC...CTGTGTTCCGTTTGACCAGCACAGAAATATTAAACGTCCTCTATTCACCGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGTGTTGGGCAAACAGCTaGCGGAAGGGTCTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVECWANS*RKGLEG
Trigger: CCCCTCCAGACCCTTCCGCAAGCTGTTTGCCCAACA...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373063.7
CDS-3UTR CAA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTGGACTCATCTCACCATaGCTGTCTGCACCCGTGGTC +
Preference number: 5 (lower is better)
Translates to: QISCLAPTLWQELGFQTSGLISP*LSAPVV
Trigger: GACCACGGGTGCAGACAGCAATGGTGAGATGAGTCC...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGGATCTGCTGCATCTGTaGCGGGGTAAGCATCTGCGG +
Preference number: 5 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEDLLHL*RGKHLR
Trigger: CCGCAGATGCTTACCCCGCAACAGATGCAGCAGATC...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGATGGGGGAGCAGAACTaGTCACTGCTTCTCCGACGG +
Preference number: 5 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVEMGEQN*SLLLRR
Trigger: CCGTCGGAGAAGCAGTGACAAGTTCTGCTCCCCCAT...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CAAATCAGCTGCCTTGCTCCAACACTCTGGCAAGAACTTGGATTTCAAACTAGTATGGGGGAGCAGAACTaGTCACTGCTTCTCCGACGG +
Preference number: 5 (lower is better)
Translates to: QISCLAPTLWQELGFQTSMGEQN*SLLLRR
Trigger: CCGTCGGAGAAGCAGTGACAAGTTCTGCTCCCCCAT...ACTAGTTTGAAATCCAAGTTCTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp TTCACAGTACGGAAAAGAAGGCGGAAGGGAGCACGAGTTAGGAAAGTGGGGGCCCACTCTGGCAAGAACTaGGATTTCAAACTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: FTVRKRRRKGARVRKVGAHSGKN*DFKLVK
Trigger: TTTCACTAGTTTGAAATCCAAGTTCTTGCCAGAGTG...GGCCCCCACTTTCCTAACTCGTGCTCCCTTCCGCCTTCTTTTCCGTACTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS-3UTR CAA 90 bp CGACAGACAGAAATAGATGGACGAAAAGGACAAAAGACATGCCTGAGAGTAGAGAGCAAATCAGCTGCCTaGCTCCAACACTCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: RQTEIDGRKGQKTCLRVESKSAA*LQHSGK
Trigger: CTTGCCAGAGTGTTGGAGCAAGGCAGCTGATTTGCT...CTCTACTCTCAGGCATGTCTTTTGTCCTTTTCGTCCATCTATTTCTGTCTGTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307972.10
ENST00000373063.7
CDS CCA 72 bp GGGCCGACCGCCGCGCGCCTCAACCCCGCCGGGGCATaGCACTTTGTGGGCTGCTTGGCTCGCTCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: GPTAARLNPAGA*HFVGCLARSGS
Trigger: GGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTTGAGGCGCGCGGCGGTCGGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS CAA 90 bp CCGGGCCGACCGCCGCGCGCCTCAACCCCGCCGGGGCATGGCACTTaGTGGGCTGCTTGGCTCGCTCCGGCTCCGCTCTTCCTTCCCGGT +
Preference number: 6 (lower is better)
Translates to: PGRPPRASTPPGHGT*WAAWLAPAPLFLPG
Trigger: ACCGGGAAGGAAGAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTTGAGGCGCGCGGCGGTCGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS GCA 72 bp CGCCTCAACCCCGCCGGGGCATGGCACTTTGTGGGCTaGTTGGCTCGCTCCGGCTCCGCTCTTCCTTCCCGG +
Preference number: 6 (lower is better)
Translates to: RLNPAGAWHFVG*LARSGSALPSR
Trigger: CCGGGAAGGAAGAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTTGAGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS GCA 72 bp CCGTGCCACTTGCAGTTGTCCCTGTGGCCCCGCCGCTaGTGCCATCGGCTTGCCCAGAGAGGCTGCCCACGC +
Preference number: 6 (lower is better)
Translates to: PCHLQLSLWPRR*CHRLAQRGCPR
Trigger: GCGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 72 bp CCGCGCGCCTCAACCCCGCCGGGGCATGGCACTTTGTaGGCTGCTTGGCTCGCTCCGGCTCCGCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: PRASTPPGHGTL*AAWLAPAPLFL
Trigger: AAGGAAGAGCGGAGCCGGAGCGAGCCAAGCAGCCCACAAAGTGCCATGCCCCGGCGGGGTTGAGGCGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373063.7
ENST00000409208.5
CDS CAA 72 bp CTGCTGGCGGAGCCAGGGTTCAGCATGCCAGGGCTGTaGAGGAGGGGGAAGCTGCTCTCGGCCAGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: LLAEPGFSMPGL*RRGKLLSARAA
Trigger: GGCCGCCCTGGCCGAGAGCAGCTTCCCCCTCCTCAACAGCCCTGGCATGCTGAACCCTGGCTCCGCCAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 72 bp GCAGGCTGCCCGGGGGCACCCTCGCCCTTCCACAGCTaGGGCAGGTCTGTTGGGCAAACAGCTGCTTGCGGA +
Preference number: 6 (lower is better)
Translates to: AGCPGAPSPFHS*GRSVGQTAACG
Trigger: TCCGCAAGCAGCTGTTTGCCCAACAGACCTGCCCCAGCTGTGGAAGGGCGAGGGTGCCCCCGGGCAGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS CCA 72 bp GCAGGCTGCCCGGGGGCACCCTCGCCCTTCCACAGCTaGGGCAGGTCTGTTGGGCAAACAGCTTGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: AGCPGAPSPFHS*GRSVGQTACGR
Trigger: CCTTCCGCAAGCTGTTTGCCCAACAGACCTGCCCCAGCTGTGGAAGGGCGAGGGTGCCCCCGGGCAGCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000670130.1
CDS GCA 72 bp GTCTGCACCCGTGGTCACTTCCCTGCCCGTGCCACTTaGAGTTGTCCCTGTGGCCCCGCCGCTGCTGCCATC +
Preference number: 6 (lower is better)
Translates to: VCTRGHFPARAT*SCPCGPAAAAI
Trigger: GATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 72 bp TCCGAGGGCCGCATGTGCAGGTGGGCCATCATGGCCTaGAGCCGCTCGCTCTCCTTGGCGAGCTGGATCTCC +
Preference number: 6 (lower is better)
Translates to: SEGRMCRWAIMA*SRSLSLASWIS
Trigger: GGAGATCCAGCTCGCCAAGGAGAGCGAGCGGCTGCAGGCCATGATGGCCCACCTGCACATGCGGCCCTCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CAA 72 bp CACCCGTGGTCACTTCCCTGCCCGTGCCACTTGCAGTaGTCCCTGTGGCCCCGCCGCTGCTGCCATCGGCTT +
Preference number: 6 (lower is better)
Translates to: HPWSLPCPCHLQ*SLWPRRCCHRL
Trigger: AAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CAA 90 bp GCCACTTGCAGTTGTCCCTGTGGCCCCGCCGCTGCTGCCATCGGCTaGCCCAGAGAGGCTGCCCACGCCATTCTGACCAGATGGAGCCGA +
Preference number: 6 (lower is better)
Translates to: ATCSCPCGPAAAAIG*PREAAHAILTRWSR
Trigger: TCGGCTCCATCTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CAA 90 bp TGCTGTCTGCACCCGTGGTCACTTCCCTGCCCGTGCCACTTGCAGTaGTCCCTGTGGCCCCGCCGCTGCTGCCATCGGCTTGCCCAGAGA +
Preference number: 6 (lower is better)
Translates to: CCLHPWSLPCPCHLQ*SLWPRRCCHRLAQR
Trigger: TCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CAA 90 bp CACCATTGCTGTCTGCACCCGTGGTCACTTCCCTGCCCGTGCCACTaGCAGTTGTCCCTGTGGCCCCGCCGCTGCTGCCATCGGCTTGCC +
Preference number: 6 (lower is better)
Translates to: HHCCLHPWSLPCPCH*QLSLWPRRCCHRLA
Trigger: GGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 72 bp CCCGAGGCTTGGTTGGGCTGCAGGCTGACCAGCCCCTaGCTCTGCAGGTTGAGCAGGTGCTGCTGCTGCAAC +
Preference number: 6 (lower is better)
Translates to: PEAWLGCRLTSP*LCRLSRCCCCN
Trigger: GTTGCAGCAGCAGCACCTGCTCAACCTGCAGAGGCAGGGGCTGGTCAGCCTGCAGCCCAACCAAGCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
ENST00000670130.1
CDS CCA 72 bp GGCAGGTCTGTTGGGCAAACAGCTTGCGGAAGGGTCTaGAGGGGCCCCGAGGCTTGGTTGGGCTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GRSVGQTACGRV*RGPEAWLGCRL
Trigger: CAGCCTGCAGCCCAACCAAGCCTCGGGGCCCCTCCAGACCCTTCCGCAAGCTGTTTGCCCAACAGACCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373063.7
ENST00000670130.1
CDS CAA 72 bp AGTTGTCCCTGTGGCCCCGCCGCTGCTGCCATCGGCTaGCCCAGAGAGGCTGCCCACGCCATTCTGACCAGA +
Preference number: 6 (lower is better)
Translates to: SCPCGPAAAAIG*PREAAHAILTR
Trigger: TCTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGCAAGCCGATGGCAGCAGCGGCGGGGCCACAGGGACAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CAA 72 bp TGTCTGCACCCGTGGTCACTTCCCTGCCCGTGCCACTaGCAGTTGTCCCTGTGGCCCCGCCGCTGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: CLHPWSLPCPCH*QLSLWPRRCCH
Trigger: ATGGCAGCAGCGGCGGGGCCACAGGGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 72 bp AGGTCTGTTGGGCAAACAGCTGCTTGCGGAAGGGTCTaGAGGGGCCCCGAGGCTTGGTTGGGCTGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: RSVGQTAACGRV*RGPEAWLGCRL
Trigger: CAGCCTGCAGCCCAACCAAGCCTCGGGGCCCCTCCAGACCCTTCCGCAAGCAGCTGTTTGCCCAACAGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000409208.5
CDS GCA 72 bp AGCAAGGCCTGCAGCTGCGGGGGCGACAGGATCTGCTaGATCTGTTGCGGGGTAAGCATCTGCGGCGACATC +
Preference number: 6 (lower is better)
Translates to: SKACSCGGDRIC*ICCGVSICGDI
Trigger: GATGTCGCCGCAGATGCTTACCCCGCAACAGATGCAGCAGATCCTGTCGCCCCCGCAGCTGCAGGCCTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 72 bp CTGGAGAGTGCGGGCCCCAACTCTCCCTCCATGCCATaGCTCCTCCACGGGAGGGGCTCATTCTCCAGAAGA +
Preference number: 6 (lower is better)
Translates to: LESAGPNSPSMP*LLHGRGSFSRR
Trigger: TCTTCTGGAGAATGAGCCCCTCCCGTGGAGGAGCCATGGCATGGAGGGAGAGTTGGGGCCCGCACTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451305.1
CDS GCA 72 bp GGAAGTGCAGCAGCTCTGCGGGACTCATCTCACCATTaGTGTCTGCACCCGTGGTCACTTCCCTGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: GSAAALRDSSHH*CLHPWSLPCPC
Trigger: GCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 72 bp GAGCTGTCGTTGTGGCGTCTGCAGCTGCAGTGTCTCTaGTCCCGGCCCAGCTTCCATAAGGCTGCATGCCTC +
Preference number: 6 (lower is better)
Translates to: ELSLWRLQLQCL*SRPSFHKAACL
Trigger: GAGGCATGCAGCCTTATGGAAGCTGGGCCGGGAGCAGAGACACTGCAGCTGCAGACGCCACAACGACAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670130.1
CDS GCA 72 bp TGCCGGGCCACTTGGAGAGCCTGTTGCTGCTGGAAGTaGAGCAGCTCTGCGGGACTCATCTCACCATTGCTG +
Preference number: 6 (lower is better)
Translates to: CRATWRACCCWK*SSSAGLISPLL
Trigger: CAGCAATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTCCAGCAGCAACAGGCTCTCCAAGTGGCCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 72 bp CTGCGGGACTCATCTCACCATTGCTGTCTGCACCCGTaGTCACTTCCCTGCCCGTGCCACTTGCAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: LRDSSHHCCLHP*SLPCPCHLQLS
Trigger: GGACAACTGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CAA 72 bp TGGAAGTGCAGCAGCTCTGCGGGACTCATCTCACCATaGCTGTCTGCACCCGTGGTCACTTCCCTGCCCGTG +
Preference number: 6 (lower is better)
Translates to: WKCSSSAGLISP*LSAPVVTSLPV
Trigger: CACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CAA 90 bp TGTTGCTGCTGGAAGTGCAGCAGCTCTGCGGGACTCATCTCACCATaGCTGTCTGCACCCGTGGTCACTTCCCTGCCCGTGCCACTTGCA +
Preference number: 6 (lower is better)
Translates to: CCCWKCSSSAGLISP*LSAPVVTSLPVPLA
Trigger: TGCAAGTGGCACGGGCAGGGAAGTGACCACGGGTGCAGACAGCAATGGTGAGATGAGTCCCGCAGAGCTGCTGCACTTCCAGCAGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS TCA 72 bp GGCTGCCCACGCCATTCTGACCAGATGGAGCCGACCTaGTTGTCTCCGAGGCAGATTCCACCATCATGTCGC +
Preference number: 6 (lower is better)
Translates to: GCPRHSDQMEPT*LSPRQIPPSCR
Trigger: GCGACATGATGGTGGAATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGCGTGGGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS GCA 72 bp ACCCGGCACTGGGCTGTACTCCGGTCATCCAGGGCGTaGTCTGTGTTGAGGTGTTTGATAAACTGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: TRHWAVLRSSRA*SVLRCLINWPR
Trigger: CCTGGGCCAGTTTATCAAACACCTCAACACAGAGCACGCCCTGGATGACCGGAGTACAGCCCAGTGCCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 72 bp TTGCCCAGAGAGGCTGCCCACGCCATTCTGACCAGATaGAGCCGACCTGATTGTCTCCGAGGCAGATTCCAC +
Preference number: 6 (lower is better)
Translates to: LPREAAHAILTR*SRPDCLRGRFH
Trigger: GTGGAATCTGCCTCGGAGACAATCAGGTCGGCTCCATCTGGTCAGAATGGCGTGGGCAGCCTCTCTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307972.10
ENST00000373057.7
ENST00000373063.7
ENST00000409208.5
CDS CCA 72 bp GGTATGAACTGGTGTGATGTCCGTAAGCCTCCCCTCTaGAGAGTGCGGGCCCCAACTCTCCCTCCATGCCAT +
Preference number: 6 (lower is better)
Translates to: GMNWCDVRKPPL*RVRAPTLPPCH
Trigger: ATGGCATGGAGGGAGAGTTGGGGCCCGCACTCTCCAGAGGGGAGGCTTACGGACATCACACCAGTTCATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451305.1