Pregenerated sensors for FOXP1-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000242094Ensembl transcript IDs: ENST00000498714.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCATCCTCTTTCAGCCTCCACTCAGCTCCCTGACACACGGTGCATaGTCCAGCTCCCTGGGATTTTCCCATTCGGAAAGGGAAGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SILFQPPLSSLTHGA*SSSLGFSHSEREAV Trigger: AACGGCTTCCCTTTCCGAATGGGAAAATCCCAGGGAGCTGGACCATGCACCGTGTGTCAGGGAGCTGAGTGGAGGCTGAAAGAGGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS TCA 90 bp | TCGGAAAGGGAAGCCGTTTGTCGAGCCAGCCTCTGTGACCACTCATaGTCTGAATTACCCACAGGTGTTCGAAAATACAGAGGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SEREAVCRASLCDHS*SELPTGVRKYRGIQ Trigger: CTGGATCCCTCTGTATTTTCGAACACCTGTGGGTAATTCAGATCATGAGTGGTCACAGAGGCTGGCTCGACAAACGGCTTCCCTTTCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS GCA 90 bp | TCTCAGTGGACATCTGCCATATCACAAGATTTGACCCAATTGGCCTaGCTTACCATAGAGAAGGCCACTGCTGGAGCAGCAGATGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SQWTSAISQDLTQLA*LTIEKATAGAADGT Trigger: AGTACCATCTGCTGCTCCAGCAGTGGCCTTCTCTATGGTAAGGCAGGCCAATTGGGTCAAATCTTGTGATATGGCAGATGTCCACTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS GCA 90 bp | GACTCTCCCCAATCCAAGGGTGAAGGATACTTGGACACAACACAATaGCAGTTCAAGTTCAAGGGAAGTGTTCCATCCTCTTTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSPQSKGEGYLDTTQ*QFKFKGSVPSSFSL Trigger: GAGGCTGAAAGAGGATGGAACACTTCCCTTGAACTTGAACTGGCATTGTGTTGTGTCCAAGTATCCTTCACCCTTGGATTGGGGAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CCA 90 bp | GTTATTCATTGTAAGACTCTCCCCAATCCAAGGGTGAAGGATACTTaGACACAACACAATGCCAGTTCAAGTTCAAGGGAAGTGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VIHCKTLPNPRVKDT*TQHNASSSSREVFH Trigger: ATGGAACACTTCCCTTGAACTTGAACTGGCATTGTGTTGTGTCCAAGTATCCTTCACCCTTGGATTGGGGAGAGTCTTACAATGAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CCA 72 bp | TTTCAGCCTCCACTCAGCTCCCTGACACACGGTGCATaGTCCAGCTCCCTGGGATTTTCCCATTCGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FQPPLSSLTHGA*SSSLGFSHSER Trigger: CCTTTCCGAATGGGAAAATCCCAGGGAGCTGGACCATGCACCGTGTGTCAGGGAGCTGAGTGGAGGCTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | CTTAGCTCTCAGTGGACATCTGCCATATCACAAGATTTGACCCAATaGGCCTGCCTTACCATAGAGAAGGCCACTGCTGGAGCAGCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LSSQWTSAISQDLTQ*ACLTIEKATAGAAD Trigger: ATCTGCTGCTCCAGCAGTGGCCTTCTCTATGGTAAGGCAGGCCAATTGGGTCAAATCTTGTGATATGGCAGATGTCCACTGAGAGCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | TGGCCCAATCTTAGCTCTCAGTGGACATCTGCCATATCACAAGATTaGACCCAATTGGCCTGCCTTACCATAGAGAAGGCCACTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WPNLSSQWTSAISQD*TQLACLTIEKATAG Trigger: TCCAGCAGTGGCCTTCTCTATGGTAAGGCAGGCCAATTGGGTCAAATCTTGTGATATGGCAGATGTCCACTGAGAGCTAAGATTGGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS GCA 72 bp | ACATCTGCCATATCACAAGATTTGACCCAATTGGCCTaGCTTACCATAGAGAAGGCCACTGCTGGAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSAISQDLTQLA*LTIEKATAGAA Trigger: TGCTGCTCCAGCAGTGGCCTTCTCTATGGTAAGGCAGGCCAATTGGGTCAAATCTTGTGATATGGCAGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 72 bp | CAGTGGACATCTGCCATATCACAAGATTTGACCCAATaGGCCTGCCTTACCATAGAGAAGGCCACTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QWTSAISQDLTQ*ACLTIEKATAG Trigger: TCCAGCAGTGGCCTTCTCTATGGTAAGGCAGGCCAATTGGGTCAAATCTTGTGATATGGCAGATGTCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS TCA 72 bp | GAAGCCGTTTGTCGAGCCAGCCTCTGTGACCACTCATaGTCTGAATTACCCACAGGTGTTCGAAAATACAGA | + |
|
Preference number: 6 (lower is better) Translates to: EAVCRASLCDHS*SELPTGVRKYR Trigger: TCTGTATTTTCGAACACCTGTGGGTAATTCAGATCATGAGTGGTCACAGAGGCTGGCTCGACAAACGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 72 bp | CTTAGCTCTCAGTGGACATCTGCCATATCACAAGATTaGACCCAATTGGCCTGCCTTACCATAGAGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSQWTSAISQD*TQLACLTIEKA Trigger: GGCCTTCTCTATGGTAAGGCAGGCCAATTGGGTCAAATCTTGTGATATGGCAGATGTCCACTGAGAGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CCA 72 bp | AATCTTCCCTGGCTGGTCAAGGTAAACATTTCTAGATaGCCCAAGTCAGTTAGCCAGGCTGACAAAAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: NLPWLVKVNISR*PKSVSQADKNA Trigger: GGCATTTTTGTCAGCCTGGCTAACTGACTTGGGCCATCTAGAAATGTTTACCTTGACCAGCCAGGGAAGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | GCTACAGGTACATGGGTGCTCACTGATTTACTCTTTGTTCCTTTTTaGTGCCAAAGTTACGGCTGCGCGTTTACTGTCAACATGCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: ATGTWVLTDLLFVPF*CQSYGCAFTVNMHH Trigger: GTGATGCATGTTGACAGTAAACGCGCAGCCGTAACTTTGGCACAAAAAAGGAACAAAGAGTAAATCAGTGAGCACCCATGTACCTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS GCA 72 bp | CAATCCAAGGGTGAAGGATACTTGGACACAACACAATaGCAGTTCAAGTTCAAGGGAAGTGTTCCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSKGEGYLDTTQ*QFKFKGSVPSS Trigger: AGAGGATGGAACACTTCCCTTGAACTTGAACTGGCATTGTGTTGTGTCCAAGTATCCTTCACCCTTGGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CCA 72 bp | CAGCCCAAGGAGGCAGTTGAAGAAAAGAACAGAGTTTaGGCAACACTTGGGGAAATAAATTCCACAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: QPKEAVEEKNRV*ATLGEINSTAF Trigger: AAAGGCTGTGGAATTTATTTCCCCAAGTGTTGCCCAAACTCTGTTCTTTTCTTCAACTGCCTCCTTGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CCA 72 bp | TGTAAGACTCTCCCCAATCCAAGGGTGAAGGATACTTaGACACAACACAATGCCAGTTCAAGTTCAAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CKTLPNPRVKDT*TQHNASSSSRE Trigger: TTCCCTTGAACTTGAACTGGCATTGTGTTGTGTCCAAGTATCCTTCACCCTTGGATTGGGGAGAGTCTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 72 bp | TTACCAGTGACAGTGGTAACTATGTGTCCTCTACCATaGCGCCGTCTATTCTTTCAATCAGCTCCATGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPVTVVTMCPLP*RRLFFQSAPCF Trigger: GAAACATGGAGCTGATTGAAAGAATAGACGGCGCAATGGTAGAGGACACATAGTTACCACTGTCACTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | GGGGAAATAAATTCCACAGCCTTTCACCAAGTTGAAATCTTGGCTTaGGACACACATAAAAATGAGCCTGGCCCAATCTTAGCTCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GEINSTAFHQVEILA*DTHKNEPGPILALS Trigger: ACTGAGAGCTAAGATTGGGCCAGGCTCATTTTTATGTGTGTCCAAAGCCAAGATTTCAACTTGGTGAAAGGCTGTGGAATTTATTTCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS TCA 72 bp | GAGTTATTCATTGTAAGACTCTCCCCAATCCAAGGGTaGAGGATACTTGGACACAACACAATGCCAGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ELFIVRLSPIQG*RILGHNTMPVQ Trigger: TTGAACTGGCATTGTGTTGTGTCCAAGTATCCTTCACCCTTGGATTGGGGAGAGTCTTACAATGAATAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | ACACTTGGGGAAATAAATTCCACAGCCTTTCACCAAGTTGAAATCTaGGCTTTGGACACACATAAAAATGAGCCTGGCCCAATCTTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLGEINSTAFHQVEI*ALDTHKNEPGPILA Trigger: AGCTAAGATTGGGCCAGGCTCATTTTTATGTGTGTCCAAAGCCAAGATTTCAACTTGGTGAAAGGCTGTGGAATTTATTTCCCCAAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS TCA 72 bp | AATTATTTAAAGTTGCTTATGGACATAGATGTTATCTaGAGATGCCCCACCCCTCCTTCCCAAGGCTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: NYLKLLMDIDVI*RCPTPPSQGSI Trigger: GATTGAGCCTTGGGAAGGAGGGGTGGGGCATCTTCAGATAACATCTATGTCCATAAGCAACTTTAAATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 72 bp | AATTCCACAGCCTTTCACCAAGTTGAAATCTTGGCTTaGGACACACATAAAAATGAGCCTGGCCCAATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: NSTAFHQVEILA*DTHKNEPGPIL Trigger: TAAGATTGGGCCAGGCTCATTTTTATGTGTGTCCAAAGCCAAGATTTCAACTTGGTGAAAGGCTGTGGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 72 bp | GAAATAAATTCCACAGCCTTTCACCAAGTTGAAATCTaGGCTTTGGACACACATAAAAATGAGCCTGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EINSTAFHQVEI*ALDTHKNEPGP Trigger: TGGGCCAGGCTCATTTTTATGTGTGTCCAAAGCCAAGATTTCAACTTGGTGAAAGGCTGTGGAATTTATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | AGCTGTAGATTACCAGTGACAGTGGTAACTATGTGTCCTCTACCATaGCGCCGTCTATTCTTTCAATCAGCTCCATGTTTCATCTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: SCRLPVTVVTMCPLP*RRLFFQSAPCFIFY Trigger: ATAAAAGATGAAACATGGAGCTGATTGAAAGAATAGACGGCGCAATGGTAGAGGACACATAGTTACCACTGTCACTGGTAATCTACAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | CCGATTATACCACTGATTTCATCTAGTCTCGCATCATCGATTCTTTaGGTCATTAGCATAATCACAGAGCATCAACTCTGGCTTATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PIIPLISSSLASSIL*VISIITEHQLWLMQ Trigger: CTGCATAAGCCAGAGTTGATGCTCTGTGATTATGCTAATGACCAAAAGAATCGATGATGCGAGACTAGATGAAATCAGTGGTATAATCGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 72 bp | ATGTCTGTTACAGAGAATTGTGTTAGAAACGCTTTGTaGACAAGGAAGGTAGAATCAGTGTTTTCCCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: MSVTENCVRNAL*TRKVESVFSLK Trigger: CTTAAGGGAAAACACTGATTCTACCTTCCTTGTCAACAAAGCGTTTCTAACACAATTCTCTGTAACAGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 72 bp | GAAATGTCTGTTACAGAGAATTGTGTTAGAAACGCTTaGTTGACAAGGAAGGTAGAATCAGTGTTTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EMSVTENCVRNA*LTRKVESVFSL Trigger: AAGGGAAAACACTGATTCTACCTTCCTTGTCAACAAAGCGTTTCTAACACAATTCTCTGTAACAGACATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | CACAGAGAAATGTCTGTTACAGAGAATTGTGTTAGAAACGCTTTGTaGACAAGGAAGGTAGAATCAGTGTTTTCCCTTAAGGTTTTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: HREMSVTENCVRNAL*TRKVESVFSLKVLV Trigger: TACTAAAACCTTAAGGGAAAACACTGATTCTACCTTCCTTGTCAACAAAGCGTTTCTAACACAATTCTCTGTAACAGACATTTCTCTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||
| CDS CAA 90 bp | ATCCACAGAGAAATGTCTGTTACAGAGAATTGTGTTAGAAACGCTTaGTTGACAAGGAAGGTAGAATCAGTGTTTTCCCTTAAGGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: IHREMSVTENCVRNA*LTRKVESVFSLKVL Trigger: TAAAACCTTAAGGGAAAACACTGATTCTACCTTCCTTGTCAACAAAGCGTTTCTAACACAATTCTCTGTAACAGACATTTCTCTGTGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498714.1 |
||