RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000114861

Ensembl transcript IDs: ENST00000318779.7, ENST00000318789.10, ENST00000327590.9, ENST00000460805.5, ENST00000468577.6, ENST00000471386.3, ENST00000472382.6, ENST00000475937.5, ENST00000484350.5, ENST00000485326.7, ENST00000491238.7, ENST00000493010.2, ENST00000493089.7, ENST00000497355.7, ENST00000497553.3, ENST00000498154.6, ENST00000498215.6, ENST00000610810.5, ENST00000614176.5, ENST00000614183.1, ENST00000615603.4, ENST00000620572.1, ENST00000622151.4, ENST00000644199.1, ENST00000647614.1, ENST00000647649.1, ENST00000647741.1, ENST00000647776.1, ENST00000647829.1, ENST00000648107.1, ENST00000648113.1, ENST00000648121.1, ENST00000648155.1, ENST00000648192.1, ENST00000648321.1, ENST00000648380.1, ENST00000648384.1, ENST00000648426.1, ENST00000648654.1, ENST00000648662.1, ENST00000648710.1, ENST00000648718.1, ENST00000648748.2, ENST00000648783.1, ENST00000648794.1, ENST00000648826.1, ENST00000648895.1, ENST00000648944.1, ENST00000649081.1, ENST00000649133.1, ENST00000649145.1, ENST00000649328.1, ENST00000649417.1, ENST00000649431.1, ENST00000649439.1, ENST00000649513.1, ENST00000649528.3, ENST00000649592.1, ENST00000649596.1, ENST00000649610.1, ENST00000649631.1, ENST00000649659.1, ENST00000649695.2, ENST00000650068.1, ENST00000650073.1, ENST00000650188.1, ENST00000650231.1, ENST00000650295.1, ENST00000650387.1, ENST00000650402.1, ENST00000650555.1, ENST00000650580.1, ENST00000674446.1

Found 2111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGTAAGCTCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCAAGGGCTGAGGGGCGGCTTTGGGTT +
Preference number: 1 (lower is better)
Translates to: EVSSVEKPPMRTWRE*HLIPDSRAEGRLWV
Trigger: AACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTTACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR GCA 90 bp TTGGAATCCTTAAATTCTGGGCAAAGGCTTGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGA +
Preference number: 1 (lower is better)
Translates to: LESLNSGQRLGLQLR*TSSVGRPQCPTLAG
Trigger: TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGGGAGAGCCTTCCAAGGCCATATTGT +
Preference number: 1 (lower is better)
Translates to: NKTNPHPLSQSTQGP*QLGSTRESLPRPYC
Trigger: ACAATATGGCCTTGGAAGGCTCTCCCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR CCA 90 bp AGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTaGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTT +
Preference number: 1 (lower is better)
Translates to: SLGAQALSGVLSVQR*QDCSSKSAAKSESV
Trigger: AACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR TCA 90 bp CTTACAAGACGGACTCTAGGGACAGGTAGGTTGGATCCTCATTCCTaGCAGTGCATTTGTCTGACACACGGGACTACCTCCCTAATGTAT +
Preference number: 1 (lower is better)
Translates to: LTRRTLGTGRLDPHS*QCICLTHGTTSLMY
Trigger: ATACATTAGGGAGGTAGTCCCGTGTGTCAGACAAATGCACTGTCAGGAATGAGGATCCAACCTACCTGTCCCTAGAGTCCGTCTTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR TCA 90 bp TCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTTaGATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCAA +
Preference number: 1 (lower is better)
Translates to: SSKFSSGQYLRGRPR*IWRPRLNSSSSTVQ
Trigger: TTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR GCA 90 bp GTCCGGACTGTATCATCTTCATCAAGGCTTATGGGTAGCAGAGATTaGGTGAGCTACACTGGGCCCAAGAAATGCCTTCAGCATTGTAAA +
Preference number: 1 (lower is better)
Translates to: VRTVSSSSRLMGSRD*VSYTGPKKCLQHCK
Trigger: TTTACAATGCTGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCATAAGCCTTGATGAAGATGATACAGTCCGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR TCA 90 bp GGACTGTATCATCTTCATCAAGGCTTATGGGTAGCAGAGATTGCGTaGGCTACACTGGGCCCAAGAAATGCCTTCAGCATTGTAAATCTG +
Preference number: 1 (lower is better)
Translates to: GLYHLHQGLWVAEIA*ATLGPRNAFSIVNL
Trigger: CAGATTTACAATGCTGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCATAAGCCTTGATGAAGATGATACAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR CCA 90 bp AACTCTTCACGTATGTACATAAGCCTTGATATTCCATTTTGTGGCTaGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGG +
Preference number: 1 (lower is better)
Translates to: NSSRMYISLDIPFCG*SKGQPNSSYKTDSR
Trigger: CCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGCCACAAAATGGAATATCAAGGCTTATGTACATACGTGAAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR GCA 90 bp CTTATGGGTAGCAGAGATTGCGTGAGCTACACTGGGCCCAAGAAATaGCTTCAGCATTGTAAATCTGATTTTCAGGATAAAGAAGCAAAA +
Preference number: 1 (lower is better)
Translates to: LMGSRDCVSYTGPKK*LQHCKSDFQDKEAK
Trigger: TTTTGCTTCTTTATCCTGAAAATCAGATTTACAATGCTGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 2 (lower is better)
Translates to: APFSSSRIALAKLPRVGFSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR TCA 90 bp CCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 2 (lower is better)
Translates to: PADGSHRVHAGGCDDRGARTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...GGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR CCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR CAA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGG +
Preference number: 2 (lower is better)
Translates to: RCCWYAPLPRSALPV*RWLSCPEWDFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGCGAGGACGGCCTCGTTaGATATGGCGGCCACGTTTA +
Preference number: 2 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVRGRPR*IWRPRL
Trigger: TAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCG...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR-3UTR TCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCCGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 2 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp AGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: RGGFGFCRLHMQVGHHGLTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...CAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR GCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 2 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR GCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 2 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCGGCCATCGGCCCAAATaGAGGCCTGAGGTCAGAACT +
Preference number: 2 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSGHRPK*RPEVRT
Trigger: AGTTCTGACCTCAGGCCTCCATTTGGGCCGATGGCC...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR CAA 90 bp CCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTaGGTTCCACAAGGGAGAGCCTTCCAAGGCCATATTGTCAGTCTA +
Preference number: 2 (lower is better)
Translates to: PTHTRYRRAPKAHGN*VPQGRAFQGHIVSL
Trigger: TAGACTGACAATATGGCCTTGGAAGGCTCTCCCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 2 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 2 (lower is better)
Translates to: APFSSSRIALAKLPRVGFPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 2 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 2 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 2 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR CCA 90 bp GGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 2 (lower is better)
Translates to: GLARPDSHSMSSFTGSSSLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...CGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
3UTR CAA 90 bp TGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGT +
Preference number: 2 (lower is better)
Translates to: CSIAPFSSSRIALAK*PRVGFPMEAVVYRG
Trigger: ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 2 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 2 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCATCGGGGCAGTATTTaGGAGGACGGCCTCGTTGAA +
Preference number: 2 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLHRGSI*EDGLVE
Trigger: TTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATG...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR-3UTR GCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 2 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 2 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR CCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 2 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp CGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 2 (lower is better)
Translates to: RGWPAPIVTPCPRLLVHLHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...AAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGACCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 2 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR GCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 2 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR CCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGG +
Preference number: 2 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNSTQGP*QLGSTR
Trigger: CCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 2 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGCCCAAATGGAGGCCTaGGGTCAGAACTTAAAATGG +
Preference number: 2 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVAQMEA*GQNLKW
Trigger: CCATTTTAAGTTCTGACCTCAGGCCTCCATTTGGGC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTACTGCCTGCACATCATaGAGCTGCCTGGAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGTACTS*SCLEKF
Trigger: AAACTTTTCCAGGCAGCTTCATGATGTGCAGGCAGT...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR TCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGCAAAGGCTTGGTCTaGAGCTTAGGTGCACAAGCT +
Preference number: 2 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPGKGLV*SLGAQA
Trigger: AGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTGCGTGACCACAGACTaGCCTTTATACAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGCVTTD*PLYRKQ
Trigger: CTGCTTTCTGTATAAAGGGCAGTCTGTGGTCACGCA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp GGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 2 (lower is better)
Translates to: GWPAPIVTPCPRLLVHLRCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...ACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp CAATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 2 (lower is better)
Translates to: QSSFSGLARPDSHSMSSFCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...AAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
3UTR-3UTR GCA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 2 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACGCCCAAATGGAGGCCTaGGGTCAGAACTTAAAATGG +
Preference number: 2 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNAQMEA*GQNLKW
Trigger: CCATTTTAAGTTCTGACCTCAGGCCTCCATTTGGGC...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 2 (lower is better)
Translates to: SELMYKLSAAAATPTFRAGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp ACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 2 (lower is better)
Translates to: TLVAVGMLHCPVQLFPYCRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...GCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 2 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 2 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR CCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 2 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR TCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 2 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTACTGCTGCGTGGAATaGATCGGCATTGTTCCTAGA +
Preference number: 2 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNYCCVE*IGIVPR
Trigger: TCTAGGAACAATGCCGATTCATTCCACGCAGCAGTA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 2 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 2 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 2 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR GCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 2 (lower is better)
Translates to: SCIERCAVGVAALHVFNKLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: SCIERCAVGVAALHVFNKTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGGCCATCGGCCCAAATaGAGGCCTGAGGTCAGAACT +
Preference number: 2 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLGHRPK*RPEVRT
Trigger: AGTTCTGACCTCAGGCCTCCATTTGGGCCGATGGCC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCCCAATACTGCTGCGTaGAATGAATCGGCATTGTTC +
Preference number: 2 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLPNTAA*NESALF
Trigger: GAACAATGCCGATTCATTCCACGCAGCAGTATTGGG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 2 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 2 (lower is better)
Translates to: SCIERCAVGVAALHVFNKHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 2 (lower is better)
Translates to: IERCAVGVAALHVFNKGRHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 2 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 2 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR CAA 90 bp CTCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTaGAATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCA +
Preference number: 2 (lower is better)
Translates to: LVKVFIGAVFARTAS*NMAATFKLFIINCP
Trigger: TGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR-3UTR TCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGA +
Preference number: 2 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVFRETW*CLKEDG
Trigger: TCCATCTTCCTTCAGACATCACCACGTTTCTCTAAA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTATACAGAAAGCAGAGTaGAGCTTCAAAAGTAACTGC +
Preference number: 2 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGIQKAE*SFKSNC
Trigger: GCAGTTACTTTTGAAGCTTCACTCTGCTTTCTGTAT...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTAAACTTGGAAAAGTGTaGCCCTGGAATTTCATCATG +
Preference number: 2 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGKLGKV*PWNFIM
Trigger: CATGATGAAATTCCAGGGTCACACTTTTCCAAGTTT...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 2 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGTAGAGTGCAGCATTTaGGACCTTTTTGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAVECSI*DLFEKD
Trigger: GTCTTTTTCAAAAAGGTCCCAAATGCTGCACTCTAC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGCTGGTAGAATGTGGTaGCATTTATTAATGGTTGCT +
Preference number: 2 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAAGRMW*HLLMVA
Trigger: AGCAACCATTAATAAATGCCACCACATTCTACCAGC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp ATCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 2 (lower is better)
Translates to: IMACRRSLSFASCSSNCCHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...ACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTGCTGGTAGAATGTGGTaGCATTTATTAATGGTTGCT +
Preference number: 2 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLAGRMW*HLLMVA
Trigger: AGCAACCATTAATAAATGCCACCACATTCTACCAGC...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR TCA 90 bp TCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTACGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 2 (lower is better)
Translates to: SWLAGVLCLLQAVALTAVRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...TACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR GCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: SCIERCAVGVAALHVFNKVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CCA 90 bp GCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCAGGTGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 2 (lower is better)
Translates to: AALGSVDFTCRWVIMACRCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 2 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCATTCATTCTCTTTCTaGCAGGACGTCACGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLHSFSF*QDVTSV
Trigger: CACAGACGTGACGTCCTGCCAGAAAGAGAATGAATG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 2 (lower is better)
Translates to: SCIERCAVGVAALHVFNKHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCCTTCATGTGTAGAGTaGAGCATTTGGGACCTTTTT +
Preference number: 2 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLPSCVE*SIWDLF
Trigger: AAAAAGGTCCCAAATGCTGCACTCTACACATGAAGG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATCCCATGACCCTGTCTaGCTACTGCCTGCACATCAT +
Preference number: 2 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSSHDPV*LLPAHH
Trigger: ATGATGTGCAGGCAGTAGCCAGACAGGGTCATGGGA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CCA 90 bp TCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTAATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 2 (lower is better)
Translates to: SWLAGVLCLLQAVALTAVICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...TACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR TCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTACTGCTGCGTGGAATaGATCGGCATTGTTCCTAGA +
Preference number: 2 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIYCCVE*IGIVPR
Trigger: TCTAGGAACAATGCCGATTCATTCCACGCAGCAGTA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 2 (lower is better)
Translates to: STCSTVQIGRPLESLNSGNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR CAA 90 bp TCAGCCCTCGTTAACTCCCTTAACAAGTTCAATCTGAAATCGAATTaGCATTCAAACAGTTTAATGCCACCAAGTAGGTCTGAACTAATG +
Preference number: 2 (lower is better)
Translates to: SALVNSLNKFNLKSN*HSNSLMPPSRSELM
Trigger: CATTAGTTCAGACCTACTTGGTGGCATTAAACTGTTTGAATGCAAATTCGATTTCAGATTGAACTTGTTAAGGGAGTTAACGAGGGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACATTCCCTAAAGGTTTaGACTGAGGTATGCGTACTA +
Preference number: 2 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSHSLKV*TEVCVL
Trigger: TAGTACGCATACCTCAGTTCAAACCTTTAGGGAATG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTCCTATATAAATAAATaGCAGGAAAGTGGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: RWDSLPSVAPLILCPIFISYINK*QESGCR
Trigger: TCTGCACCCACTTTCCTGTCATTTATTTATATAGGA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAATACAGAAAGCAGAGTaGAGCTTCAAAAGTAACTGC +
Preference number: 2 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSIQKAE*SFKSNC
Trigger: GCAGTTACTTTTGAAGCTTCACTCTGCTTTCTGTAT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATATGTACATAAGCCTTaGTATTCCATTTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSYVHKP*YSILWL
Trigger: CAGCCACAAAATGGAATATCAAGGCTTATGTACATA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 3 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR CCA 72 bp AACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGGGAGAGCCTTCCAAGG +
Preference number: 3 (lower is better)
Translates to: NPHPLSQSTQGP*QLGSTRESLPR
Trigger: CCTTGGAAGGCTCTCCCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp TCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: SRGWPAPIVTPCPRLLVHSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...ATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
3UTR-3UTR CAA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: RCCWYAPLPRSALPVLRWYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...CCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR TCA 72 bp TCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCAAGGGCTGAGGGGCGG +
Preference number: 3 (lower is better)
Translates to: SVEKPPMRTWRE*HLIPDSRAEGR
Trigger: CCGCCCCTCAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR CCA 72 bp GCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAG +
Preference number: 3 (lower is better)
Translates to: APLPRSALPVLR*LSCPEWDFPWK
Trigger: CTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 3 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 3 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR CCA 72 bp TTTAGAAGCACAGGGCCCCCTTCCCATGACCCTGTCTaGCTACTGCCTGCACATCATGAAGCTGCCTGGAAA +
Preference number: 3 (lower is better)
Translates to: FRSTGPPSHDPV*LLPAHHEAAWK
Trigger: TTTCCAGGCAGCTTCATGATGTGCAGGCAGTAGCCAGACAGGGTCATGGGAAGGGGGCCCTGTGCTTCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 3 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 3 (lower is better)
Translates to: RCCWYAPLPRSALPVLRWLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...CCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 3 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR TCA 72 bp CGGACTCTAGGGACAGGTAGGTTGGATCCTCATTCCTaGCAGTGCATTTGTCTGACACACGGGACTACCTCC +
Preference number: 3 (lower is better)
Translates to: RTLGTGRLDPHS*QCICLTHGTTS
Trigger: GGAGGTAGTCCCGTGTGTCAGACAAATGCACTGTCAGGAATGAGGATCCAACCTACCTGTCCCTAGAGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR GCA 72 bp TTAAATTCTGGGCAAAGGCTTGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACG +
Preference number: 3 (lower is better)
Translates to: LNSGQRLGLQLR*TSSVGRPQCPT
Trigger: CGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCCCAGAATTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR GCA 72 bp CGACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTaGGAGGACGGCCTCGTTGAATATGGCGGCCACGTT +
Preference number: 3 (lower is better)
Translates to: RQARQSFHRGSI*EDGLVEYGGHV
Trigger: AACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR CCA 72 bp GCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTaGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGT +
Preference number: 3 (lower is better)
Translates to: AQALSGVLSVQR*QDCSSKSAAKS
Trigger: ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR CCA 72 bp GTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTTGCTGTTGGTATGCTC +
Preference number: 3 (lower is better)
Translates to: VYRMHGLHRRSA*TAVTLVAVGML
Trigger: GAGCATACCAACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR CCA 72 bp GGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGGCGTTCTTTGTCTTTT +
Preference number: 3 (lower is better)
Translates to: GAALGSVDFTCR*VIMACRRSLSF
Trigger: AAAAGACAAAGAACGCCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 3 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAASQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR CAA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGTACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 3 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 3 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR CAA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 3 (lower is better)
Translates to: SCIERCAVGVAALHVFNKSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 3 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 3 (lower is better)
Translates to: IERCAVGVAALHVFNKGRSRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 3 (lower is better)
Translates to: SCIERCAVGVAALHVFNKMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR TCA 72 bp CCTCCCCCGAACCACCCCCAATACTGCTGCGTGGAATaGATCGGCATTGTTCCTAGAGTTTGTCTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: PPPNHPQYCCVE*IGIVPRVCLSF
Trigger: AAAAGAGAGACAAACTCTAGGAACAATGCCGATTCATTCCACGCAGCAGTATTGGGGGTGGTTCGGGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR GCA 72 bp CTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTT +
Preference number: 3 (lower is better)
Translates to: LSGVLSVQRWQD*SSKSAAKSESV
Trigger: AACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 3 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 3 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR CAA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTCCTATCGCTTGTCATTaGCCTCTAAATTCTTTTGCC +
Preference number: 3 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGPIACH*PLNSFA
Trigger: GGCAAAAGAATTTAGAGGCAAATGACAAGCGATAGG...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGCGAGGACGGCCTCGTaGAATATGGCGGCCACGTTT +
Preference number: 3 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTARTAS*NMAATF
Trigger: AAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGC...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR-3UTR CAA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTATACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 3 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp CAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 3 (lower is better)
Translates to: QGLRGGFGFCRLHMQVGHSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...ATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR TCA 72 bp CATCTTCATCAAGGCTTATGGGTAGCAGAGATTGCGTaGGCTACACTGGGCCCAAGAAATGCCTTCAGCATT +
Preference number: 3 (lower is better)
Translates to: HLHQGLWVAEIA*ATLGPRNAFSI
Trigger: AATGCTGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCATAAGCCTTGATGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR TCA 72 bp TTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTTaGATATGGCGGCCACGTTTAAACTCTTCATCATCA +
Preference number: 3 (lower is better)
Translates to: FSSGQYLRGRPR*IWRPRLNSSSS
Trigger: TGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR GCA 72 bp GTATCATCTTCATCAAGGCTTATGGGTAGCAGAGATTaGGTGAGCTACACTGGGCCCAAGAAATGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: VSSSSRLMGSRD*VSYTGPKKCLQ
Trigger: CTGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCATAAGCCTTGATGAAGATGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 3 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR-3UTR CAA 90 bp AGTGTTAGCTGCTTTTCTGGAGATTCGAGAATGGCCTGCCTAATTAAAGATGCAGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 3 (lower is better)
Translates to: SVSCFSGDSRMACLIKDAASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...TGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 3 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
3UTR GCA 72 bp TTCTTGTTACTGGCAGCACATATACATGAAGCACCATaGTCACAGTCCGGACTGTATCATCTTCATCAAGGC +
Preference number: 3 (lower is better)
Translates to: FLLLAAHIHEAP*SQSGLYHLHQG
Trigger: GCCTTGATGAAGATGATACAGTCCGGACTGTGAGCATGGTGCTTCATGTATATGTGCTGCCAGTAACAAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR CCA 72 bp CGTATGTACATAAGCCTTGATATTCCATTTTGTGGCTaGTCCAAGGGGCAGCCTAACTCATCTTACAAGACG +
Preference number: 3 (lower is better)
Translates to: RMYISLDIPFCG*SKGQPNSSYKT
Trigger: CGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGCCACAAAATGGAATATCAAGGCTTATGTACATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 3 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 3 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp TCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTACATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 3 (lower is better)
Translates to: SWLAGVLCLLQAVALTAVHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...TACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
3UTR-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 3 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 3 (lower is better)
Translates to: RWDSLPSVAPLILCPIFISQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: STCSTVQIGRPLESLNSGFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
3UTR TCA 72 bp CAAAACGGAATGTTTTCTGACTTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGAATGAGTGACAGAAAG +
Preference number: 3 (lower is better)
Translates to: QNGMFSDFRETW*CLKEDGMSDRK
Trigger: CTTTCTGTCACTCATTCCATCTTCCTTCAGACATCACCACGTTTCTCTAAAGTCAGAAAACATTCCGTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR TCA 72 bp GCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTaGTACTGGGTTGGTGATATAATATTGCATAACAAA +
Preference number: 3 (lower is better)
Translates to: AQGLHDIFYEFL*YWVGDIILHNK
Trigger: TTTGTTATGCAATATTATATCACCAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PADGSHRVHAGGCDDRGAACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...GGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp GGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: GLARPDSHSMSSFTGSSSVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...CGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000648321.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGAGGGCCCCCTTCCCATaGCCCTGTCTGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLRAPFP*PCLATA
Trigger: GGCAGTAGCCAGACAGGGTCATGGGAAGGGGGCCCT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTATGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTTGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRACCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: PADGSHRVHAGGCDDRGAHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...GGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAGGGCCCCCTTCCCATaGCCCTGTCTGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAARAPFP*PCLATA
Trigger: GGCAGTAGCCAGACAGGGTCATGGGAAGGGGGCCCT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAGATTATGACGCACTGCATTCTTCCACGTGGCCGCGTTGCGTCGGAAGTAAGCGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: KIMTHCILPRGRVASEVSVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...GCTTACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SRGWPAPIVTPCPRLLVHSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...ATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAASACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTCGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LSLRTGALQLPLDRGALLSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCTTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: LRMGPTVCMLVVVMTEGPSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...AGGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGGTTCTGGCTGTTTCTaGGAAGCGGGGGTTGCCGAG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQGSGCF*EAGVAE
Trigger: CTCGGCAACCCCCGCTTCGCAGAAACAGCCAGAACC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp ACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: TLVAVGMLHCPVQLFPYCPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...GCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: AVTLVAVGMLHCPVQLFPCCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCCCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTTGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFCCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAARACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGLRGGFGFCRLHMQVGHRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...ATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CCA 90 bp TCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SGLARPDSHSMSSFTGSSRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...AGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCAATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FSGLARPDSHSMSSFTGSMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...TGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSLRTGALQLPLDRGALLAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PADGSHRVHAGGCDDRGAGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...GGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACGAGGACGGCCTCGTTaGATATGGCGGCCACGTTTA +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGRGRPR*IWRPRL
Trigger: TAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSVGEVS*PDVHGR
Trigger: CCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCAC...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTTGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCTACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LRMGPTVCMLVVVMTEGPTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...AGGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRACCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSCCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMACCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMASTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGLHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQLHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGGCCATCGGCCCAAATaGAGGCCTGAGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFGHRPK*RPEVRT
Trigger: AGTTCTGACCTCAGGCCTCCATTTGGGCCGATGGCC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGTGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YRLRMGPTVCMLVVVMTECHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...CTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAARGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCACGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: FSGLARPDSHSMSSFTGSRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...TGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGACAGTGCATTTGTCTaGCACACGGGACTACCTCCC +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQDSAFV*HTGLPP
Trigger: GGGAGGTAGTCCCGTGTGTCAGACAAATGCACTGTC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTCGAGGACGGCCTCGTTaGATATGGCGGCCACGTTTA +
Preference number: 4 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSRGRPR*IWRPRL
Trigger: TAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCG...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQLVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMASMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEASMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: RGGFGFCRLHMQVGHHGLSMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...CAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGTGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTTGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: RMHGLHRRSAWTAVTLVACLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...AGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRACLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTACTTTCAGGGCAGCTaGTCGGGGAAGCCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSYFQGS*SGKPVF
Trigger: AAAAACCGGCTTCCCCGAGCAGCTGCCCTGAAAGTA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTCCTGGGGGCACAGGTTaGAGTGAGCTGAAATGGCAC +
Preference number: 4 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSPGGTG*SELKWH
Trigger: GTGCCATTTCAGCTCACTGCAACCTGTGCCCCCAGG...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAAACCTCAGGGAGGTTTaGCTCCACAGTAGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGNLREV*LHSSWL
Trigger: CAGCCAGCTACTGTGGAGGCAAACCTCCCTGAGGTT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp TACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGCAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: YRLRMGPTVCMLVVVMTEQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...CTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGAAAGCCTGGGGTCACTaGGAGGGGGCATGCATAATG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQKAWGH*EGACIM
Trigger: CATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEAPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: LSLRTGALQLPLDRGALLPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp AAGCTCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTGACACTTGATACCAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KLCGEASDADLERVTLDTRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...GGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp ACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: TLVAVGMLHCPVQLFPYCSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...GCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: YRMHGLHRRSAWTAVTLVSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTACCAGCCAGGGCAAGATaGCGAGACGCTGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVPARAR*RDAVPT
Trigger: TGTGGGGACAGCGTCTCGCCATCTTGCCCTGGCTGG...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCAGAGGTTGGTGCGAATaGCACCCTTCCACGTGGCCG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSRGWCE*HPSTWP
Trigger: CGGCCACGTGGAAGGGTGCCATTCGCACCAACCTCT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR CCA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGAGGGTTACTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: RCCWYAPLPRSALPVLRWRVTST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGTAACCCT...CCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCCATCCGTTCATGGCTaGCAGCAAATCAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLPSVHG*QQIREG
Trigger: CCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGG...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACCATCCGTTCATGGCTaGCAGCAAATCAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGPSVHG*QQIREG
Trigger: CCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAACCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLARPDSHSMSSFTGSSSHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...CGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAGGGCCCCCTTCCCATaGCCCTGTCTGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVRAPFP*PCLATA
Trigger: GGCAGTAGCCAGACAGGGTCATGGGAAGGGGGCCCT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGAGCGGCTCCCTCTTTaGCGTTCGCCGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESERLPL*RSPGRW
Trigger: CCAGCGCCCCGGCGAACGGCAAAGAGGGAGCCGCTC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318789.10
ENST00000615603.4
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAALVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp GTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTTGAATATGGCGGCCACGCTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: VFIGAVFARTASLNMAATLVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...CGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATCTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDLVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRARRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGTGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAASTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: SGLARPDSHSMSSFTGSSVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...AGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTACTTTCAGGGCAGCTaGTCGGGGAAGCCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQYFQGS*SGKPVF
Trigger: AAAAACCGGCTTCCCCGAGCAGCTGCCCTGAAAGTA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGACCCTGTCTGGCTACTaGCTGCACATCATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLTLSGY*LHIMKL
Trigger: CAGCTTCATGATGTGCAGGCAGTAGCCAGACAGGGT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAACCCTGTCTGGCTACTaGCTGCACATCATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGTLSGY*LHIMKL
Trigger: CAGCTTCATGATGTGCAGGCAGTAGCCAGACAGGGT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATCTTCTGGGACACCGCTaGAAATGGTCTCTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDLLGHR*KWSLGA
Trigger: TGCACCGAGAGACCATTTGCAGCGGTGTCCCAGAAG...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGGAGCCCGTACTGTCTaGCTTTGGATTTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQGARTV*LWISVF
Trigger: GAAGACGGAAATCCAAAGGCAGACAGTACGGGCTCC...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTAAAGCCTGGGGTCACTaGGAGGGGGCATGCATAATG +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFKAWGH*EGACIM
Trigger: CATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTT...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGCTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTACTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVLHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCACTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMALHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGGCCATCGGCCCAAATaGAGGCCTGAGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAGHRPK*RPEVRT
Trigger: AGTTCTGACCTCAGGCCTCCATTTGGGCCGATGGCC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTCCCATGACCCTGTCTaGCTACTGCCTGCACATCAT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLSHDPV*LLPAHH
Trigger: ATGATGTGCAGGCAGTAGCCAGACAGGGTCATGGGA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATCCCATGACCCTGTCTaGCTACTGCCTGCACATCAT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQSHDPV*LLPAHH
Trigger: ATGATGTGCAGGCAGTAGCCAGACAGGGTCATGGGA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCAATAGTAGCACCTAGGTaGGAAGAAGCAGAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: FSGLARPDSHSMSSFTGSIVAPR*EEAEGG
Trigger: GCCGCCCTCTGCTTCTTCCCACCTAGGTGCTACTAT...TGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGCTGTAGATGGGTTCTaGCTGTTTCTGCGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAAVDGF*LFLRSG
Trigger: CCCGCTTCGCAGAAACAGCCAGAACCCATCTACAGC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTGGCACCCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLWHPST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGGGTGCCA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR TCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTTGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RGWPAPIVTPCPRLLVHLCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...AAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000648321.1
CDS-3UTR TCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGGGAAGGGTTACCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGGKGYH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGTAACCCTTCCC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGGGAAGGGTTACCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQGKGYH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGTAACCCTTCCC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: SGLARPDSHSMSSFTGSSPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...AGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGACAGTGCATTTGTCTaGCACACGGGACTACCTCCC +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRADSAFV*HTGLPP
Trigger: GGGAGGTAGTCCCGTGTGTCAGACAAATGCACTGTC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCGTAGCAGAGATTGCGTaGGCTACACTGGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSVAEIA*ATLGPR
Trigger: TCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTAC...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGAAAGCACTTATGCAGTaGGAGGTTGGTGCGAATGGC +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWKALMQ*EVGANG
Trigger: GCCATTCGCACCAACCTCTCACTGCATAAGTGCTTT...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCACTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRALVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCACTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPLVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SCIERCAVGVAALHVFNKACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GWPAPIVTPCPRLLVHLRSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...ACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000648321.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSSMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPSMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAACWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLSLRTGALQLPLDRGALCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...AAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: GLARPDSHSMSSFTGSSSDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...CGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: YRLRMGPTVCMLVVVMTEWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...CTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCATGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: LSLRTGALQLPLDRGALLMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTATCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGGCAAAGGCTTGGTCTaGAGCTTAGGTGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAGKGLV*SLGAQA
Trigger: AGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGGCAAAGGCTTGGTCTaGAGCTTAGGTGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCGKGLV*SLGAQA
Trigger: AGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGGCAAAGGCTTGGTCTaGAGCTTAGGTGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRGKGLV*SLGAQA
Trigger: AGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTACTTTCAGGGCAGCTaGTCGGGGAAGCCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRYFQGS*SGKPVF
Trigger: AAAAACCGGCTTCCCCGAGCAGCTGCCCTGAAAGTA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGCTGGGAGGTGGAGGTTaGAGTGTGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEALGGGG*SVLRSC
Trigger: GCATGATCTCAGCACACTGCAACCTCCACCTCCCAG...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGAGCAGTGGCGACTCCTaGTGCACAGTGGCTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSSGDS*CTVALC
Trigger: ACACAGAGCCACTGTGCAGCAGGAGTCGCCACTGCT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475937.5
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGCCGCGAGTACAGCGTaGAACCGCCACACAATAAAT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAAASTA*NRHTIN
Trigger: ATTTATTGTGTGGCGGTTGCACGCTGTACTCGCGGC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493089.7
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTACTTTCGGGTTCCGCTaGAAATGGTCTCTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAATFGFR*KWSLGA
Trigger: TGCACCGAGAGACCATTTGCAGCGGAACCCGAAAGT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp GCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCAGGGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: AALGSVDFTCRWVIMACRGWLWG*SSWDKL
Trigger: GAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAGTCAACAAAAGCTTCTaGGACACCGCGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRVNKSF*DTAESG
Trigger: CCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGAC...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: YRLRMGPTVCMLVVVMTEPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...CTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CTGTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLSLRTGALQLPLDRGALIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...AAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAADFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGGCCATCGGCCCAAATaGAGGCCTGAGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVGHRPK*RPEVRT
Trigger: AGTTCTGACCTCAGGCCTCCATTTGGGCCGATGGCC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMASTQGP*QLGSTR
Trigger: CCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCT...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSSTQGP*QLGSTR
Trigger: CCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTCACGGCGCTCCAGCCTaGGCAACACAGCAATATCCT +
Preference number: 4 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVHGAPA*ATQQYP
Trigger: AGGATATTGCTGTGTTGCCCAGGCTGGAGCGCCGTG...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGCTTCTGGGACACTCTaGCTGTTAGCAGTGGCGACT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAASGTL*LLAVAT
Trigger: AGTCGCCACTGCTAACAGCCAGAGTGTCCCAGAAGC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475937.5
3UTR CAA 72 bp TGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: WYAPLPRSALPV*RWLSCPEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR CAA 72 bp GGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACGGCTTGCATAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GPSASSGSRGSS*TCTGCTACIGD
Trigger: ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
3UTR CAA 72 bp TGCGCAATATCTGCTGACGAAATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGGATGGGTCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: CAISADEMGTLY*SEYRLRMGPTV
Trigger: CACGGTGGGACCCATCCGCAGGCGGTACTCAGACAAATACAACGTGCCCATTTCGTCAGCAGATATTGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCCATCCGTTCATGGCTaGCAGCAAATCAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSPSVHG*QQIREG
Trigger: CCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR TCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCCCATCCGTTCATGGCTaGCAGCAAATCAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRPSVHG*QQIREG
Trigger: CCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGG...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGGGAAGGGTTACCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRGKGYH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGTAACCCTTCCC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: CCHSRCCWYAPLPRSALPPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGCCCAAATGGAGGCCTaGGGTCAGAACTTAAAATGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAAQMEA*GQNLKW
Trigger: CCATTTTAAGTTCTGACCTCAGGCCTCCATTTGGGC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGCCCAAATGGAGGCCTaGGGTCAGAACTTAAAATGG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCAQMEA*GQNLKW
Trigger: CCATTTTAAGTTCTGACCTCAGGCCTCCATTTGGGC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAACTGCCTGCACATCATaGAGCTGCCTGGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQTACTS*SCLEKF
Trigger: AAACTTTTCCAGGCAGCTTCATGATGTGCAGGCAGT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGACAGGAGGCTGAGGCATaGGAATCGTTTGAACCTGGG +
Preference number: 4 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGQEAEA*ESFEPG
Trigger: CCCAGGTTCAAACGATTCTCATGCCTCAGCCTCCTG...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp GCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCAGGTGTCATCATAGCCACTaGCACGGGAACCTGACACTC +
Preference number: 4 (lower is better)
Translates to: AALGSVDFTCRWVIMACRCHHSH*HGNLTL
Trigger: GAGTGTCAGGTTCCCGTGTCAGTGGCTATGATGACA...CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCATAATGCCACAGGACTaGAACACACAGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCIMPQD*NTQREA
Trigger: GGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTAT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRATLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp AAGCTCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTGACACTTGATACCTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: KLCGEASDADLERVTLDTSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...GGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: RCCWYAPLPRSALPVLRWCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...CCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTATGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: RMHGLHRRSAWTAVTLVADRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...AGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMACKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: CCHSRCCWYAPLPRSALPCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: RGWPAPIVTPCPRLLVHLEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...AAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKREIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCATTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AAGCTCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTGACACTTGATACCGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: KLCGEASDADLERVTLDTVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...GGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRASLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEAEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSLRTGALQLPLDRGALLTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATGCGTGACCACAGACTaGCCTTTATACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQCVTTD*PLYRKQ
Trigger: CTGCTTTCTGTATAAAGGGCAGTCTGTGGTCACGCA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTATGGGTAGCAGAGATTaGGTGAGCTACACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVMGSRD*VSYTGP
Trigger: GGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCAT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGTCAACAAAAGCTTCTaGGACACCGCGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLVNKSF*DTAESG
Trigger: CCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGAC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTCAACAAAAGCTTCTaGGACACCGCGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPVNKSF*DTAESG
Trigger: CCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGAC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGCAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEAQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTCAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGAAAGCCTGGGGTCACTaGGAGGGGGCATGCATAATG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVKAWGH*EGACIM
Trigger: CATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGACCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: AWLLCMFLIREGLCATSSPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...CGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGCAGCCACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCACCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAAPASLR*TAPPED
Trigger: GTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGG...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTGCTGCTGCTGGGCGTaGGCGAGGTCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGCCCWA*ARSAAP
Trigger: CGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSLRTGALQLPLDRGALLIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEAHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCAGGCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: AALGSVDFTCRWVIMACRHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CCA 90 bp AGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RGGFGFCRLHMQVGHHGLDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...CAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSESTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GWPAPIVTPCPRLLVHLRLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...ACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CAATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: QSSFSGLARPDSHSMSSFLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...AAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: YRMHGLHRRSAWTAVTLVLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCGACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ATSSSKFSSGQYLRGRPRPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...ACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEAPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLLHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLLHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSLHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGGGCCATCGGCCCAAATaGAGGCCTGAGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLGHRPK*RPEVRT
Trigger: AGTTCTGACCTCAGGCCTCCATTTGGGCCGATGGCC...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTCCCATGACCCTGTCTaGCTACTGCCTGCACATCAT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSSHDPV*LLPAHH
Trigger: ATGATGTGCAGGCAGTAGCCAGACAGGGTCATGGGA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTTGCGTGAGCTACACTaGGCCCAAGAAATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAALRELH*AQEMPS
Trigger: TGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTTGACACCAAGCCCTaGTTAGCCACCTGGCCATGC +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPVDTKP*LATWPC
Trigger: GCATGGCCAGGTGGCTAACCAGGGCTTGGTGTCAAC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475937.5
CDS-3UTR CCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCTGGGAGTACCCCGTaGCAATTCCTCAGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSAGSTP*QFLSLL
Trigger: CAGCAGACTGAGGAATTGCCACGGGGTACTCCCAGC...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS-3UTR CCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTCAGAGCCGGTTCAGCTaGGAGTACCCCGTGGCAATT +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGQSRFS*EYPVAI
Trigger: AATTGCCACGGGGTACTCCCAGCTGAACCGGCTCTG...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRATDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TGCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGGGAAGGGTTACCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: CCHSRCCWYAPLPRSALPGKGYH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGTAACCCTTCCC...GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGCCCAAATGGAGGCCTaGGGTCAGAACTTAAAATGG +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAAQMEA*GQNLKW
Trigger: CCATTTTAAGTTCTGACCTCAGGCCTCCATTTGGGC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGGACTGAGGTTGTACTaGCCTGTAACCATCACATTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGGLRLY*PVTITF
Trigger: AAATGTGATGGTTACAGGTCAGTACAACCTCAGTCC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTACTGCCTGCACATCATaGAGCTGCCTGGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRTACTS*SCLEKF
Trigger: AAACTTTTCCAGGCAGCTTCATGATGTGCAGGCAGT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGGGGCACAGGTTGCAGTaGGCTGAAATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: AWLLCMFLIREGLCATSSGHRLQ*AEMAPL
Trigger: CAGTGGTGCCATTTCAGCTCACTGCAACCTGTGCCC...CGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGCAGCCACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPLVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGCCTGTTGCTGCTGCTaGTGGGCGTGGGCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLACCCC*WAWARS
Trigger: TGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648321.1
ENST00000648384.1
ENST00000648654.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSESMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAGATTATGACGCACTGCATTCTTCCACGTGGCCGCGTTGCGTCGGAAGTAAGCTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KIMTHCILPRGRVASEVSCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...GCTTACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCAGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: FSGLARPDSHSMSSFTGSACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...TGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AAGCTCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTGACACTTGATACCGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: KLCGEASDADLERVTLDTGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...GGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: GWPAPIVTPCPRLLVHLREIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...ACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSECLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp ACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TLVAVGMLHCPVQLFPYCEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...GCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTACTTTCAGGGCAGCTaGTCGGGGAAGCCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVYFQGS*SGKPVF
Trigger: AAAAACCGGCTTCCCCGAGCAGCTGCCCTGAAAGTA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTACTGGGCCCAAGAAATaGCTTCAGCATTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSTGPKK*LQHCKS
Trigger: AGATTTACAATGCTGAAGGCATTTCTTGGGCCCAGT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAATGGGTAGCAGAGATTaGGTGAGCTACACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSMGSRD*VSYTGP
Trigger: GGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCAT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCAGTGAGAGGTTGGTaGGAATGGCACCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSAVRGW*EWHPTD
Trigger: ATCAGTGGGGTGCCATTCGCACCAACCTCTCACTGC...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGTSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACAAAGCCTGGGGTCACTaGGAGGGGGCATGCATAATG +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNKAWGH*EGACIM
Trigger: CATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTTGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACCCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGTGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSLPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GWPAPIVTPCPRLLVHLRHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...ACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: YRMHGLHRRSAWTAVTLVPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCATTCATTCTCTTTCTaGCAGGACGTCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAHSFSF*QDVTSV
Trigger: CACAGACGTGACGTCCTGCCAGAAAGAGAATGAATG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCCCAATACTGCTGCGTaGAATGAATCGGCATTGTTC +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAPNTAA*NESALF
Trigger: GAACAATGCCGATTCATTCCACGCAGCAGTATTGGG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPSTQGP*QLGSTR
Trigger: CCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCATTCCATTTTGTGGCTaGTCCAAGGGGCAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSIPFCG*SKGQPN
Trigger: GTTAGGCTGCCCCTTGGACCAGCCACAAAATGGAAT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTTTACTAGGTCTGACTaGATGCTGGGGATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFFTRSD*MLGMVL
Trigger: TAACACCATCCCCAGCATCCAGTCAGACCTAGTAAA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTTGCGTGAGCTACACTaGGCCCAAGAAATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGLRELH*AQEMPS
Trigger: TGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTGTCAACAAAAGCTTCTaGGACACCGCTGCAAATGGT +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFVNKSF*DTAANG
Trigger: ACCATTTGCAGCGGTGTCCCAGAAGCTTTTGTTGAC...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGAAAATAGGAATCCCTaGGTCAGGTGTGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALENRNP*VRCGGS
Trigger: TGAGCCACCACACCTGACCCAGGGATTCCTATTTTC...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSESCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTTGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: GWPAPIVTPCPRLLVHLRWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...ACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCAGGTGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: AALGSVDFTCRWVIMACRWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRACKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTATGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCAGCAGGCTGCCCGGGCTaGATTGTCAGAAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAAAGCPG*IVRRPW
Trigger: CCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGC...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAARSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp ACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCAACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TASLNMAATFKLFIINCPTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...TGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CIERCAVGVAALHVFNKGTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCACGTTGTATTTGTCTaGGTACCGCCTGCGGATGGG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVHVVFV*VPPADG
Trigger: CCCATCCGCAGGCGGTACTCAGACAAATACAACGTG...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGACGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: CIERCAVGVAALHVFNKGRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGFRETW*CLKEDG
Trigger: TCCATCTTCCTTCAGACATCACCACGTTTCTCTAAA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTGCCTGCACATCATaGAGCTGCCTGGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMATACTS*SCLEKF
Trigger: AAACTTTTCCAGGCAGCTTCATGATGTGCAGGCAGT...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAAGGGCCCCCTTCCCATaGCCCTGTCTGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKRAPFP*PCLATA
Trigger: GGCAGTAGCCAGACAGGGTCATGGGAAGGGGGCCCT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCATTCCCTAAAGGTTTaGACTGAGGTATGCGTACTA +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQHSLKV*TEVCVL
Trigger: TAGTACGCATACCTCAGTTCAAACCTTTAGGGAATG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTTGGATCCTCATTCCTaGCAGTGCATTTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCLDPHS*QCICLT
Trigger: TGTCAGACAAATGCACTGTCAGGAATGAGGATCCAA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTAGCAGAGATTGCGTaGGCTACACTGGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSVAEIA*ATLGPR
Trigger: TCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTAC...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTAAGGACCCTGGACACTaGAGCATATTTGCTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSKDPGH*SIFAPN
Trigger: ATTTGGAGCAAATATGCTTCAGTGTCCAGGGTCCTT...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGATAATGCCACAGGACTaGAACACACAGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLIMPQD*NTQREA
Trigger: GGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTAT...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTATAATGCCACAGGACTaGAACACACAGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVIMPQD*NTQREA
Trigger: GGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTAT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp AAGGGAAGGGTTATGTGCGACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: KGRVMCDKLVKVFIGAVFSMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...AAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCGCACATAACCCTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESSMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTATGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: SGLARPDSHSMSSFTGSSTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...AGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RMHGLHRRSAWTAVTLVAACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...AGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQSCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATTCTCTTTCTCAGGTTaGAATAGCCTATCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQFSFSG*NSLSLV
Trigger: GACAAGCGATAGGCTATTGCAACCTGAGAAAGAGAA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATGCGTGACCACAGACTaGCCTTTATACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRACVTTD*PLYRKQ
Trigger: CTGCTTTCTGTATAAAGGGCAGTCTGTGGTCACGCA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCATACATGAAGCACCATaGTCACAGTCCGGACTGTAT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCIHEAP*SQSGLY
Trigger: ATACAGTCCGGACTGTGAGCATGGTGCTTCATGTAT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTACTTTCGGGTTCCGCTaGAAATGGTCTCTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPTFGFR*KWSLGA
Trigger: TGCACCGAGAGACCATTTGCAGCGGAACCCGAAAGT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493089.7
ENST00000649528.3
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACACTTTCGGGTTCCGCTaGAAATGGTCTCTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNTFGFR*KWSLGA
Trigger: TGCACCGAGAGACCATTTGCAGCGGAACCCGAAAGT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649528.3
CDS-3UTR GCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTGGCAATTCCTCAGTCTaGTGCACGTCCAAACCCAAA +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSGNSSV*CTSKPK
Trigger: TTTGGGTTTGGACGTGCAGCAGACTGAGGAATTGCC...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGTCAACAAAAGCTTCTaGGACACCGCGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEVNKSF*DTAESG
Trigger: CCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGAC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: RCCWYAPLPRSALPVLRWTSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...CCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAATSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTAAAGCCTGGGGTCACTaGGAGGGGGCATGCATAATG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSKAWGH*EGACIM
Trigger: CATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AAGCTCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTGACACTTGATACCTCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: KLCGEASDADLERVTLDTSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...GGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCAATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAAMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGACTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: CIERCAVGVAALHVFNKGLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCATTCATTCTCTTTCTaGCAGGACGTCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSHSFSF*QDVTSV
Trigger: CACAGACGTGACGTCCTGCCAGAAAGAGAATGAATG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCACCCAATACTGCTGCGTaGAATGAATCGGCATTGTTC +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAPNTAA*NESALF
Trigger: GAACAATGCCGATTCATTCCACGCAGCAGTATTGGG...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVSTQGP*QLGSTR
Trigger: CCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTAGCACCCAAGGCCCATaGCAACTTGGTTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSSTQGP*QLGSTR
Trigger: CCTTGTGGAACCAAGTTGCCATGGGCCTTGGGTGCT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGAAACGGAGTTCAGCTaGAATATGGAAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQETEFS*NMEKRG
Trigger: TCCTCTCTTTTCCATATTCCAGCTGAACTCCGTTTC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGATACAAAGAAATAGCTaGGTGTGGTGGTGCGTGCCT +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVIQRNS*VWWCVP
Trigger: AGGCACGCACCACCACACCCAGCTATTTCTTTGTAT...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp GGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGATGAACTCTCAAAACTaGGCTGTGAGGTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: GLARPDSHSMSSFTGSSSMNSQN*AVRSPF
Trigger: GAATGGAGACCTCACAGCCCAGTTTTGAGAGTTCAT...CGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTAAAAGTCTGCAGAGCTaGGAGGAGTCTAGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSKSLQS*EESSAY
Trigger: ATAAGCACTAGACTCCTCCCAGCTCTGCAGACTTTT...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAAGCTGTCTTGCCACCTaGAGTGCCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESSCLAT*SACCCC
Trigger: GCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: IERCAVGVAALHVFNKGRCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTATGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: NLHSRGWPAPIVTPCPRLCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...TAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR TCA 90 bp TACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: YRMHGLHRRSAWTAVTLVCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: RGWPAPIVTPCPRLLVHLVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...AAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTAACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SWLAGVLCLLQAVALTAVTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...TACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR TCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCFRETW*CLKEDG
Trigger: TCCATCTTCCTTCAGACATCACCACGTTTCTCTAAA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTACTGCTGCGTGGAATaGATCGGCATTGTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVYCCVE*IGIVPR
Trigger: TCTAGGAACAATGCCGATTCATTCCACGCAGCAGTA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCGGACTGAGGTTGTACTaGCCTGTAACCATCACATTT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSGLRLY*PVTITF
Trigger: AAATGTGATGGTTACAGGTCAGTACAACCTCAGTCC...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTACTGCCTGCACATCATaGAGCTGCCTGGAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVTACTS*SCLEKF
Trigger: AAACTTTTCCAGGCAGCTTCATGATGTGCAGGCAGT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCATTCCCTAAAGGTTTaGACTGAGGTATGCGTACTA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCHSLKV*TEVCVL
Trigger: TAGTACGCATACCTCAGTTCAAACCTTTAGGGAATG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATTGGATCCTCATTCCTaGCAGTGCATTTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRALDPHS*QCICLT
Trigger: TGTCAGACAAATGCACTGTCAGGAATGAGGATCCAA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCAAGAATTCGACTGGCTaGGAAATGGGGGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRKNSTG*EMGEER
Trigger: TCTTTCTTCCCCCATTTCTCAGCCAGTCGAATTCTT...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGAAAGCACTTATGCAGTaGGAGGTTGGTGCGAATGGC +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLKALMQ*EVGANG
Trigger: GCCATTCGCACCAACCTCTCACTGCATAAGTGCTTT...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACCATCCCAAATGTAGTTaGCACCAAGCCCTGGTTAGC +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNHPKCS*HQALVS
Trigger: GCTAACCAGGGCTTGGTGTCAACTACATTTGGGATG...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475937.5
CDS-3UTR TCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGAAGTACTGTGCGGCTaGAGCACACTCGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLEVLCG*STLEEK
Trigger: TTTCTCTTCGAGTGTGCTTCAGCCGCACAGTACTTC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGAAGTGCAGAGAAAATaGAGAGTTTGGCGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVEVQRK*RVWRRE
Trigger: CTCCCTTCGCCAAACTCTTCATTTTCTCTGCACTTC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGSVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTATGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NLHSRGWPAPIVTPCPRLCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...TAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTAGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RMHGLHRRSAWTAVTLVANCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...AGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp ACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TLVAVGMLHCPVQLFPYCWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...GCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCTTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: LRMGPTVCMLVVVMTEGPWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...AGGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGGTCTGCAGCTTAGGTaGACAAGCTCTGTCGGGCGT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESGLQLR*TSSVGR
Trigger: ACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTTCTCTTTCTCAGGTTaGAATAGCCTATCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRFSFSG*NSLSLV
Trigger: GACAAGCGATAGGCTATTGCAACCTGAGAAAGAGAA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTGCGTGACCACAGACTaGCCTTTATACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVCVTTD*PLYRKQ
Trigger: CTGCTTTCTGTATAAAGGGCAGTCTGTGGTCACGCA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTGCGTGACCACAGACTaGCCTTTATACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVCVTTD*PLYRKQ
Trigger: CTGCTTTCTGTATAAAGGGCAGTCTGTGGTCACGCA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTACTGGGCCCAAGAAATaGCTTCAGCATTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAATGPKK*LQHCKS
Trigger: AGATTTACAATGCTGAAGGCATTTCTTGGGCCCAGT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGCAGTGAGAGGTTGGTaGGAATGGCACCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESAVRGW*EWHPST
Trigger: CGTGGAAGGGTGCCATTCGCACCAACCTCTCACTGC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGACACAGCACACGCAGTaGGCCCTGGCTAGACCAAGC +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLTQHTQ*ALARPS
Trigger: GCTTGGTCTAGCCAGGGCGCACTGCGTGTGCTGTGT...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGCCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTTGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTATTTGCGAGGACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VFARTASLNMAATFKLFIDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...GATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATGACAGAGGGGCCTTaGGTGACGGGAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKMTEGP*VTGVRG
Trigger: CCCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAACTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSELPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: AWLLCMFLIREGLCATSSHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...CGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGCAGCCACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGGCCATCGGCCCAAATaGAGGCCTGAGGTCAGAACT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESGHRPK*RPEVRT
Trigger: AGTTCTGACCTCAGGCCTCCATTTGGGCCGATGGCC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTCATTCATTCTCTTTCTaGCAGGACGTCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLHSFSF*QDVTSV
Trigger: CACAGACGTGACGTCCTGCCAGAAAGAGAATGAATG...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCCCAATACTGCTGCGTaGAATGAATCGGCATTGTTC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVPNTAA*NESALF
Trigger: GAACAATGCCGATTCATTCCACGCAGCAGTATTGGG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGCTGGTAGAATGTGGTaGCATTTATTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQAGRMW*HLLMVA
Trigger: AGCAACCATTAATAAATGCCACCACATTCTACCAGC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATACCAAGCTTATGAGTaGATGGGAGTGTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGYQAYE*MGVLLF
Trigger: GAAAAGTAACACTCCCATCCACTCATAAGCTTGGTA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGAAACGGAGTTCAGCTaGAATATGGAAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAETEFS*NMEKRG
Trigger: TCCTCTCTTTTCCATATTCCAGCTGAACTCCGTTTC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTCTTCTTTGTGCCTTTaGAAACGGAGTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSSSLCL*KRSSAG
Trigger: TCCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATCTTCTTTGTGCCTTTaGAAACGGAGTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMASSLCL*KRSSAG
Trigger: TCCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGATGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CIERCAVGVAALHVFNKGCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AVTLVAVGMLHCPVQLFPCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCGAGGGGCTCTTCTTTaGCGTGTACAGGATGCACGG +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLRGALL*RVQDAR
Trigger: CCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSFRETW*CLKEDG
Trigger: TCCATCTTCCTTCAGACATCACCACGTTTCTCTAAA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTACTGCTGCGTGGAATaGATCGGCATTGTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLYCCVE*IGIVPR
Trigger: TCTAGGAACAATGCCGATTCATTCCACGCAGCAGTA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCACTTTAGCATTTGCTaGACTCAGCCCTCGTTAACT +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVHFSIC*TQPSLT
Trigger: AGTTAACGAGGGCTGAGTTCAGCAAATGCTAAAGTG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTCCTATATAAATAAATaGCAGGAAAGTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLSYINK*QESGCR
Trigger: TCTGCACCCACTTTCCTGTCATTTATTTATATAGGA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATCCTATATAAATAAATaGCAGGAAAGTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQSYINK*QESGCR
Trigger: TCTGCACCCACTTTCCTGTCATTTATTTATATAGGA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCCTAAAGGTTTGAACTaGGGTATGCGTACTAACAGT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSPKGLN*GMRTNS
Trigger: ACTGTTAGTACGCATACCTCAGTTCAAACCTTTAGG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCATTCCCTAAAGGTTTaGACTGAGGTATGCGTACTA +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSHSLKV*TEVCVL
Trigger: TAGTACGCATACCTCAGTTCAAACCTTTAGGGAATG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCACATTCCCTAAAGGTTTaGACTGAGGTATGCGTACTA +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAHSLKV*TEVCVL
Trigger: TAGTACGCATACCTCAGTTCAAACCTTTAGGGAATG...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCAAACTTGGAAAAGTGTaGCCCTGGAATTTCATCATG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCKLGKV*PWNFIM
Trigger: CATGATGAAATTCCAGGGTCACACTTTTCCAAGTTT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTATGTACATAAGCCTTaGTATTCCATTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQYVHKP*YSILWL
Trigger: CAGCCACAAAATGGAATATCAAGGCTTATGTACATA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTATGTACATAAGCCTTaGTATTCCATTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLYVHKP*YSILWL
Trigger: CAGCCACAAAATGGAATATCAAGGCTTATGTACATA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGAGCAACGGAAAGAACTaGGAAAAAGAACCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVSNGKN*EKEPQY
Trigger: ATACTGGGGTTCTTTTTCTCAGTTCTTTCCGTTGCT...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTGAGGTTGCAGTGTGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACEVAVC*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCACACTGCAACCTC...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAASVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp AGTGTTAGCTGCTTTTCTGGAGATTCGAGAATGGCCTGCCTAATTAAAGATGCAAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: SVSCFSGDSRMACLIKDASMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...TGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGSMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTAGCATGAGGGCCTGCTaGTGCTGGAGGAGAACCTGG +
Preference number: 4 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTSMRAC*CWRRTW
Trigger: CCAGGTTCTCCTCCAGCAGCAGCAGGCCCTCATGCT...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCIERCAVGVAALHVFNKCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSECKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR GCA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: APFSSSRIALAKLPRVGFNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAANCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRASCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGSCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: IERCAVGVAALHVFNKGRSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCACCTTCATGTGTAGAGTaGAGCATTTGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAPSCVE*SIWDLF
Trigger: AAAAAGGTCCCAAATGCTGCACTCTACACATGAAGG...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATTCTCTTTCTCAGGTTaGAATAGCCTATCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAFSFSG*NSLSLV
Trigger: GACAAGCGATAGGCTATTGCAACCTGAGAAAGAGAA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAACCCTGTCTGGCTACTaGCTGCACATCATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSETLSGY*LHIMKL
Trigger: CAGCTTCATGATGTGCAGGCAGTAGCCAGACAGGGT...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGACTGATAAAGCACTTATaGAGTGAGAGGTTGGTGCGA +
Preference number: 4 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGLIKHL*SERLVR
Trigger: TCGCACCAACCTCTCACTGCATAAGTGCTTTATCAG...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTACTTTCGGGTTCCGCTaGAAATGGTCTCTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCTFGFR*KWSLGA
Trigger: TGCACCGAGAGACCATTTGCAGCGGAACCCGAAAGT...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTTGACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: DKLVKVFIGAVFARTASLTSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...CAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLTSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAACAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGAAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGACACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: CIERCAVGVAALHVFNKGHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: GLARPDSHSMSSFTGSSSICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...CGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTAGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGTAGAGTGCAGCATTTaGGACCTTTTTGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRVECSI*DLFEKD
Trigger: GTCTTTTTCAAAAAGGTCCCAAATGCTGCACTCTAC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCATTCATTCTCTTTCTaGCAGGACGTCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPHSFSF*QDVTSV
Trigger: CACAGACGTGACGTCCTGCCAGAAAGAGAATGAATG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCATTCATTCTCTTTCTaGCAGGACGTCACGTCTGTG +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLHSFSF*QDVTSV
Trigger: CACAGACGTGACGTCCTGCCAGAAAGAGAATGAATG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACCCAATACTGCTGCGTaGAATGAATCGGCATTGTTC +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSPNTAA*NESALF
Trigger: GAACAATGCCGATTCATTCCACGCAGCAGTATTGGG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTATTCCATTTTGTGGCTaGTCCAAGGGGCAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSIPFCG*SKGQPN
Trigger: GTTAGGCTGCCCCTTGGACCAGCCACAAAATGGAAT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGATTCCATTTTGTGGCTaGTCCAAGGGGCAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVIPFCG*SKGQPN
Trigger: GTTAGGCTGCCCCTTGGACCAGCCACAAAATGGAAT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGAAACGGAGTTCAGCTaGAATATGGAAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAETEFS*NMEKRG
Trigger: TCCTCTCTTTTCCATATTCCAGCTGAACTCCGTTTC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTCTTCTTTGTGCCTTTaGAAACGGAGTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLSSLCL*KRSSAG
Trigger: TCCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTAGTTCAAGACCAGCCTaGTCAACATGGCGAAATTCT +
Preference number: 4 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVSSRPA*STWRNS
Trigger: AGAATTTCGCCATGTTGACCAGGCTGGTCTTGAACT...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTCTTCTTGCTGTAGATaGGTTCTGGCTGTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLSSCCR*VLAVSA
Trigger: CGCAGAAACAGCCAGAACCCATCTACAGCAAGAAGA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCGTACTGTCTGCCTTTaGATTTCCGTCTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPRTVCL*ISVFLL
Trigger: CAGCAAGAAGACGGAAATCCAAAGGCAGACAGTACG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCCAATATCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCQYLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGATATTG...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493089.7
ENST00000649596.1
3UTR CAA 72 bp GTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTaGAATATGGCGGCCACGTTTAAACTCTTCATCATC +
Preference number: 4 (lower is better)
Translates to: VFIGAVFARTAS*NMAATFKLFII
Trigger: GATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp AAGGGAAGGGTTATGTGCGACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTCCATCCGTTCATGGCTaGCAGCAAATCAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: KGRVMCDKLVKVFIGAVFPSVHG*QQIREG
Trigger: CCCTTCTCTGATTTGCTGTCAGCCATGAACGGATGG...AAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCGCACATAACCCTTCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR TCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR TCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVCKSCC*KANCWV
Trigger: TACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR TCA 90 bp AGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: RGGFGFCRLHMQVGHHGLAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...CAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAACCAGATTCAAGGGCTaGGGGGCGGCTTTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKTRFKG*GAALGS
Trigger: AGAACCCAAAGCCGCCCCTCAGCCCTTGAATCTGGT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SCIERCAVGVAALHVFNKGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTGGGAAGGGTTACCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCGKGYH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGTAACCCTTCCC...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGGGAAGGGTTACCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEGKGYH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGTAACCCTTCCC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACCACTTTAGCATTTGCTaGACTCAGCCCTCGTTAACT +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNHFSIC*TQPSLT
Trigger: AGTTAACGAGGGCTGAGTTCAGCAAATGCTAAAGTG...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGGACTGAGGTTGTACTaGCCTGTAACCATCACATTT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSGLRLY*PVTITF
Trigger: AAATGTGATGGTTACAGGTCAGTACAACCTCAGTCC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCATACAGAAAGCAGAGTaGAGCTTCAAAAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSIQKAE*SFKSNC
Trigger: GCAGTTACTTTTGAAGCTTCACTCTGCTTTCTGTAT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCCTAAAGGTTTGAACTaGGGTATGCGTACTAACAGT +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVPKGLN*GMRTNS
Trigger: ACTGTTAGTACGCATACCTCAGTTCAAACCTTTAGG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGACAGTGCATTTGTCTaGCACACGGGACTACCTCCC +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLDSAFV*HTGLPP
Trigger: GGGAGGTAGTCCCGTGTGTCAGACAAATGCACTGTC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTTGGATCCTCATTCCTaGCAGTGCATTTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPLDPHS*QCICLT
Trigger: TGTCAGACAAATGCACTGTCAGGAATGAGGATCCAA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGTAGCAGAGATTGCGTaGGCTACACTGGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLVAEIA*ATLGPR
Trigger: TCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTAC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GCGACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTGAAAGTATCGAATACTaGAGACAGGTAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: ATSSSKFSSGQYLRGRPRESIEY*RQVKEI
Trigger: GATCTCCTTTACCTGTCTTCAGTATTCGATACTTTC...ACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCACTTCACTTTCAAAGTTaGAAGATCAGTTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMALHFQS*KISWSL
Trigger: CAAGCTCCAACTGATCTTTCAACTTTGAAAGTGAAG...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR GCA 90 bp AGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTTCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: RMHGLHRRSAWTAVTLVASVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...AGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAAGTGCCTGTTGCTGCTaGTGCTGGGCGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSSACCC*CWAWAR
Trigger: CCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESCKDRR*CCCNCC
Trigger: GCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAGAAGGCCTTGGCGCTaGAAAGACAGGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGRRPWR*KDRRCC
Trigger: GCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCAGGAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: AALGSVDFTCRWVIMACRNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTAAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: NLHSRGWPAPIVTPCPRLSCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...TAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR GCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGTCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLSTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATCCACGTGGCCGCGTTaGGTCGGAAGTAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAASTWPR*VGSKQT
Trigger: TGTTTGCTTACTTCCGACGCAACGCGGCCACGTGGA...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGGCAAAGGCTTGGTCTaGAGCTTAGGTGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESGKGLV*SLGAQA
Trigger: AGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCCTTCATGTGTAGAGTaGAGCATTTGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVPSCVE*SIWDLF
Trigger: AAAAAGGTCCCAAATGCTGCACTCTACACATGAAGG...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTTCTCTTTCTCAGGTTaGAATAGCCTATCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVFSFSG*NSLSLV
Trigger: GACAAGCGATAGGCTATTGCAACCTGAGAAAGAGAA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTTCAGTTGGTTCTTCTaGAAGGCTGTGATACCTGCA +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPFSWFF*KAVIPA
Trigger: TGCAGGTATCACAGCCTTGCAGAAGAACCAACTGAA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTACTGGGCCCAAGAAATaGCTTCAGCATTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLTGPKK*LQHCKS
Trigger: AGATTTACAATGCTGAAGGCATTTCTTGGGCCCAGT...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGATACATGAAGCACCATaGTCACAGTCCGGACTGTAT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLIHEAP*SQSGLY
Trigger: ATACAGTCCGGACTGTGAGCATGGTGCTTCATGTAT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCACATCGGGGCAGTATTTaGGAGGACGGCCTCGTTGAA +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAAHRGSI*EDGLVE
Trigger: TTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATG...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCATCGGGGCAGTATTTaGGAGGACGGCCTCGTTGAA +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLHRGSI*EDGLVE
Trigger: TTCAACGAGGCCGTCCTCGCAAATACTGCCCCGATG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGAAGGAGCTGTCTTaGCACCTGAAGTGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVKKELS*HLKCRE
Trigger: TTCTCTGCACTTCAGGTGGCAAGACAGCTCCTTCTT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR GCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTACTTTCGGGTTCCGCTaGAAATGGTCTCTCGGTGCA +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACTFGFR*KWSLGA
Trigger: TGCACCGAGAGACCATTTGCAGCGGAACCCGAAAGT...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGGTCAACAAAAGCTTCTaGGACACCGCGGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWVNKSF*DTAESG
Trigger: CCCGGACTCCGCGGTGTCCCAGAAGCTTTTGTTGAC...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPTSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGAAAGCCTGGGGTCACTaGGAGGGGGCATGCATAATG +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLKAWGH*EGACIM
Trigger: CATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTT...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTGTTGCTGCTGCTGCTaGGCGTGGGCGAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFICCCCC*AWARSA
Trigger: AGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSESLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: AVTLVAVGMLHCPVQLFPRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCACATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACTTCATTCTCGGGGTTaGCCCGCCCCGATAGTCACT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKLHSRG*PAPIVT
Trigger: AGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGCTGGTAGAATGTGGTaGCATTTATTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGAGRMW*HLLMVA
Trigger: AGCAACCATTAATAAATGCCACCACATTCTACCAGC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGCTGGTAGAATGTGGTaGCATTTATTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAAGRMW*HLLMVA
Trigger: AGCAACCATTAATAAATGCCACCACATTCTACCAGC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAGCTTATGAGTGGATaGGAGTGTTACTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFKLMSG*ECYFSL
Trigger: TAAAGAAAAGTAACACTCCCATCCACTCATAAGCTT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCTGTATCCGCAGACATaGAATGATGGAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSLYPQT*NDGITV
Trigger: AACTGTAATTCCATCATTCCATGTCTGCGGATACAG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTATTGCAAAAGGACCCTaGACACTGAAGCATATTTGC +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSIAKGP*TLKHIC
Trigger: GCAAATATGCTTCAGTGTCCAGGGTCCTTTTGCAAT...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp ATCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTTGGGGGTGCTCCTCATaGGACAAACTCTTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: IMACRRSLSFASCSSNCCWGCSS*DKLFRL
Trigger: CAGCCTAAAGAGTTTGTCCCATGAGGAGCACCCCCA...ACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR TCA 90 bp CGGCCACGTTTAAACTCTTCATCATCAACTGTCCAAAAGGACCCAAACTCATCCACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: RPRLNSSSSTVQKDPNSSTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...GGATGAGTTTGGGTCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTATGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: NLHSRGWPAPIVTPCPRLCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...TAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR TCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR TCA 90 bp TCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTAGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SWLAGVLCLLQAVALTAVGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...TACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR TCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNFRETW*CLKEDG
Trigger: TCCATCTTCCTTCAGACATCACCACGTTTCTCTAAA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLFRETW*CLKEDG
Trigger: TCCATCTTCCTTCAGACATCACCACGTTTCTCTAAA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATACTGCTGCGTGGAATaGATCGGCATTGTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEYCCVE*IGIVPR
Trigger: TCTAGGAACAATGCCGATTCATTCCACGCAGCAGTA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGATACAGAAAGCAGAGTaGAGCTTCAAAAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVIQKAE*SFKSNC
Trigger: GCAGTTACTTTTGAAGCTTCACTCTGCTTTCTGTAT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGACAGTGCATTTGTCTaGCACACGGGACTACCTCCC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKDSAFV*HTGLPP
Trigger: GGGAGGTAGTCCCGTGTGTCAGACAAATGCACTGTC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATATGTACATAAGCCTTaGTATTCCATTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRAYVHKP*YSILWL
Trigger: CAGCCACAAAATGGAATATCAAGGCTTATGTACATA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTATGTACATAAGCCTTaGTATTCCATTTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGYVHKP*YSILWL
Trigger: CAGCCACAAAATGGAATATCAAGGCTTATGTACATA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGTCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLSVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: SLTCTGCTACIGDLPGLLSVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...CAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLVSGC*RPTHSG
Trigger: TCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CGGCCACGTTTAAACTCTTCATCATCAACTGTCCAAAAGGACCCAAACTCATCCAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: RPRLNSSSSTVQKDPNSSKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...GGATGAGTTTGGGTCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGGATGGCTATGGGGGTaGTCCTCATGGGACAAACTT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLGWLWG*SSWDKL
Trigger: AAGTTTGTCCCATGAGGAGCACCCCCATAGCCATCC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTAGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SWLAGVLCLLQAVALTAVEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...TACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSSCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPSCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGTGGAGAAGCCTCCGATaGGGACTTGGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWWRSLR*GLGESD
Trigger: GTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCA...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: SELMYKLSAAAATPTFRADSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMANKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCCTTCATGTGTAGAGTaGAGCATTTGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLPSCVE*SIWDLF
Trigger: AAAAAGGTCCCAAATGCTGCACTCTACACATGAAGG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGTACTTTCAGGGCAGCTaGTCGGGGAAGCCGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLYFQGS*SGKPVF
Trigger: AAAAACCGGCTTCCCCGAGCAGCTGCCCTGAAAGTA...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTTCAGTTGGTTCTTCTaGAAGGCTGTGATACCTGCA +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSFSWFF*KAVIPA
Trigger: TGCAGGTATCACAGCCTTGCAGAAGAACCAACTGAA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATGGGTAGCAGAGATTaGGTGAGCTACACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKMGSRD*VSYTGP
Trigger: GGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVTSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp AGTGTTAGCTGCTTTTCTGGAGATTCGAGAATGGCCTGCCTAATTAAAGATGCAAAAGCCTGGGGTCACTaGGAGGGGGCATGCATAATG +
Preference number: 4 (lower is better)
Translates to: SVSCFSGDSRMACLIKDAKAWGH*EGACIM
Trigger: CATTATGCATGCCCCCTCCCAGTGACCCCAGGCTTT...TGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGACCGACCCATTCTGGATaGCTGAACCGTTACTTTTTG +
Preference number: 4 (lower is better)
Translates to: CIERCAVGVAALHVFNKGPTHSG*LNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGG...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGPPDPF*MAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIPHSSK*LLPPDP
Trigger: TGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAAGGGCCTGCTGCTGCTaGAGGAGAACCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSRACCC*RRTWSC
Trigger: GCAGCTCCAGGTTCTCCTCCAGCAGCAGCAGGCCCT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAAGTACCGCCTGCGGATaGGTCCCACCGTGTGCATGC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSSTACG*VPPCAC
Trigger: GCATGCACACGGTGGGACCCATCCGCAGGCGGTACT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CAATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: QSSFSGLARPDSHSMSSFCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...AAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTACATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGCTGGTAGAATGTGGTaGCATTTATTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVAGRMW*HLLMVA
Trigger: AGCAACCATTAATAAATGCCACCACATTCTACCAGC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTAAGCTTATGAGTGGATaGGAGTGTTACTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRKLMSG*ECYFSL
Trigger: TAAAGAAAAGTAACACTCCCATCCACTCATAAGCTT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCAAGCTTATGAGTGGATaGGAGTGTTACTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCKLMSG*ECYFSL
Trigger: TAAAGAAAAGTAACACTCCCATCCACTCATAAGCTT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTTTACTAGGTCTGACTaGATGCTGGGGATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVFTRSD*MLGMVL
Trigger: TAACACCATCCCCAGCATCCAGTCAGACCTAGTAAA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTATTTACAGCCTATCTTaGGTTAAGAATCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRIYSLS*VKNPRF
Trigger: AAACCTTGGATTCTTAACCCAAGATAGGCTGTAAAT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTCTGTATCCGCAGACATaGAATGATGGAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLLYPQT*NDGITV
Trigger: AACTGTAATTCCATCATTCCATGTCTGCGGATACAG...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTTCACGTCTTACCCGCTaGAAGAATTCGCAGCATACA +
Preference number: 4 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCSRLTR*KNSQHT
Trigger: TGTATGCTGCGAATTCTTCCAGCGGGTAAGACGTGA...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAGAGGTTGGTGCGAATaGCACCCCACTGATCTTTTG +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACRGWCE*HPTDLL
Trigger: CAAAAGATCAGTGGGGTGCCATTCGCACCAACCTCT...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATATGCAGTGAGAGGTTaGTGCGAATGGCACCCCACT +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAAYAVRG*CEWHPT
Trigger: AGTGGGGTGCCATTCGCACCAACCTCTCACTGCATA...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGTCAACAAAAGCTTCTaGGACACTCTGGCTGTTAGC +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEVNKSF*DTLAVS
Trigger: GCTAACAGCCAGAGTGTCCCAGAAGCTTTTGTTGAC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475937.5
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGCGCATGCTCACTGTTaGGATGTTTTAGAAATGATT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSAHAHC*DVLEMI
Trigger: AATCATTTCTAAAACATCTCAACAGTGAGCATGCGC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGGAGAGAGTGACACTTaGTACCAGATTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLGESDT*YQIQGL
Trigger: CAGCCCTTGAATCTGGTATCAAGTGTCACTCTCTCC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CGGCCACGTTTAAACTCTTCATCATCAACTGTCCAAAAGGACCCAAACTCATCCCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: RPRLNSSSSTVQKDPNSSRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...GGATGAGTTTGGGTCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AGTGTTAGCTGCTTTTCTGGAGATTCGAGAATGGCCTGCCTAATTAAAGATGCAGGGGTCGTTGGAGTATaGGGTAAGCTCTGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SVSCFSGDSRMACLIKDAGVVGV*GKLCGE
Trigger: TTCTCCACAGAGCTTACCTCATACTCCAACGACCCC...TGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTCCTATATAAATAAATaGCAGGAAAGTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLSYINK*QESGCR
Trigger: TCTGCACCCACTTTCCTGTCATTTATTTATATAGGA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTCTTCTAAATTTACGATaGAGGAGCAGTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLLLNLR*RSSSLS
Trigger: AGAAAGAGAACTGCTCCTTCATCGTAAATTTAGAAG...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCCTAAAGGTTTGAACTaGGGTATGCGTACTAACAGT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVPKGLN*GMRTNS
Trigger: ACTGTTAGTACGCATACCTCAGTTCAAACCTTTAGG...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGAAACTTGGAAAAGTGTaGCCCTGGAATTTCATCATG +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLKLGKV*PWNFIM
Trigger: CATGATGAAATTCCAGGGTCACACTTTTCCAAGTTT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCAAAAGGACGAATGGCACCCCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: SLNMAATFKLFIINCPKGRMAPH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGGGTGCCATTCG...TCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp TCACTGTTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGACTGACACGGGAACCTaGCACTCTCCATGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLLRCFRNDWKSSHTASQTDTGT*HSPCSR
Trigger: GCGGCTACATGGAGAGTGTCAGGTTCCCGTGTCAGT...CTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR TCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGTCATCATAGCCACTaGCACGGGAACCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGCHHSH*HGNRPS
Trigger: TGAAGGACGGTTCCCGTGTCAGTGGCTATGATGACA...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCT +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGTLVSG*CRPTHS
Trigger: AGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGT...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR GCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGTGCTGGGTAGCCACCTaGTGTTGCTCTTTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWCWVAT*CCSLGC
Trigger: ACAGCCTAAAGAGCAACAGCAGGTGGCTACCCAGCA...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTTGCTGCTGTAACTGCTaGATCTGTAAAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACCCCNC*ICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSETSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGAACTGCTGTACAACCTaGATTTGTACTCTACATTGG +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLNCCTT*ICTLHW
Trigger: CCAATGTAGAGTACAAATGCAGGTTGTACAGCAGTT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATGTCTGAGTACCGCCTaGGGATGGGTCCCACCGTGT +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSCLSTA*GWVPPC
Trigger: ACACGGTGGGACCCATCCGCAGGCGGTACTCAGACA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: SSRIALAKLPRVGFPMEAWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTTTGCGCTGGCTAAGTTaGCCAGAGTGGGATTTCCCA +
Preference number: 4 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTLRWLS*PEWDFP
Trigger: TGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAA...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGAGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGTCGTTGCTGTTGGTATaGTCCATTGCCCCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWSLLLV*SIAPFS
Trigger: GCTGAACGGGGCAATGGAGCATACCAACAGCAACGA...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTTGCTGTCACTCTCGTTaGTGTTGGTATGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACCCHSR*CWYAPL
Trigger: CAATGGAGCATACCAACAGCAACGAGAGTGACAGCA...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGGAGATCTGCCTGGACTaGTGTCACTCTCGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWEICLD*CHSRCC
Trigger: ACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTC...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAACAGGATGCACGGCTTaGATAGGAGATCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKTGCTA*IGDLPG
Trigger: TCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCAACGTTGGCAGGACTaGAGTTCAAAGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLQRWQD*SSKSAA
Trigger: AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCCTTCATGTGTAGAGTaGAGCATTTGGGACCTTTTT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVPSCVE*SIWDLF
Trigger: AAAAAGGTCCCAAATGCTGCACTCTACACATGAAGG...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTTCTCTTTCTCAGGTTaGAATAGCCTATCGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVFSFSG*NSLSLV
Trigger: GACAAGCGATAGGCTATTGCAACCTGAGAAAGAGAA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAACCCTGTCTGGCTACTaGCTGCACATCATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKTLSGY*LHIMKL
Trigger: CAGCTTCATGATGTGCAGGCAGTAGCCAGACAGGGT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGCAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATTGTCAGAAGGCCTTaGCGCTGCAAAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKIVRRP*RCKDRR
Trigger: CCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SCIERCAVGVAALHVFNKTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTCACTGCTTCACAGCCTaGCCACTTGCATACACCATG +
Preference number: 4 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTHCFTA*PLAYTM
Trigger: CATGGTGTATGCAAGTGGCCAGGCTGTGAAGCAGTG...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTTGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CCA 90 bp AGTGTTAGCTGCTTTTCTGGAGATTCGAGAATGGCCTGCCTAATTAAAGATGCAGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSCFSGDSRMACLIKDADFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...TGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTATTTGCGAGGACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VFARTASLNMAATFKLFIYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...GATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKLSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: IERCAVGVAALHVFNKGRVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGGTAGAGTGCAGCATTTaGGACCTTTTTGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLVECSI*DLFEKD
Trigger: GTCTTTTTCAAAAAGGTCCCAAATGCTGCACTCTAC...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTACCAAGCTTATGAGTaGATGGGAGTGTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLYQAYE*MGVLLF
Trigger: GAAAAGTAACACTCCCATCCACTCATAAGCTTGGTA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGTTGCGTGAGCTACACTaGGCCCAAGAAATGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLLRELH*AQEMPS
Trigger: TGAAGGCATTTCTTGGGCCCAGTGTAGCTCACGCAA...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCTGTATCCGCAGACATaGAATGATGGAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPLYPQT*NDGITV
Trigger: AACTGTAATTCCATCATTCCATGTCTGCGGATACAG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTATGCAGTGAGAGGTTaGTGCGAATGGCACCCTTCC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGYAVRG*CEWHPS
Trigger: GGAAGGGTGCCATTCGCACCAACCTCTCACTGCATA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR CCA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGAAGTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLKFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAACTT...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFICCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGACTGACACGGGAACCTaGAGAGCTGGTTGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVTDTGT*RAGCLS
Trigger: TGACAAACAACCAGCTCTTCAGGTTCCCGTGTCAGT...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGGGAAGGGTTACCACTaGTCTTTTGTGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGGKGYH*SFVAFV
Trigger: AACGAAGGCCACAAAAGATCAGTGGTAACCCTTCCC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGACCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGCCCAAATGGAGGCCTaGGGTCAGAACTTAAAATGG +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGAQMEA*GQNLKW
Trigger: CCATTTTAAGTTCTGACCTCAGGCCTCCATTTGGGC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACACTTTAGCATTTGCTaGACTCAGCCCTCGTTAACT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESHFSIC*TQPSLT
Trigger: AGTTAACGAGGGCTGAGTTCAGCAAATGCTAAAGTG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCTTCTAAATTTACGATaGAGGAGCAGTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLLLNLR*RSSSLS
Trigger: AGAAAGAGAACTGCTCCTTCATCGTAAATTTAGAAG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAACTTGGAAAAGTGTaGCCCTGGAATTTCATCATG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVKLGKV*PWNFIM
Trigger: CATGATGAAATTCCAGGGTCACACTTTTCCAAGTTT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATAATGCCACAGGACTaGAACACACAGAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKIMPQD*NTQREA
Trigger: GGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSSVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCAAAAGGAAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SLNMAATFKLFIINCPKGKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...TCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKKKELS*HLKCLL
Trigger: CAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGAAATCTTCGCACACTaGTTCACAGCCTGGCCACTT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKEIFAH*FTAWPL
Trigger: AAGTGGCCAGGCTGTGAAGCAGTGTGCGAAGATTTC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGTCAAAGTTAAGATTATGACGCACTaGATTCTTCCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: ALHVFNKGRVMCDKLVKVKIMTH*ILPRGR
Trigger: GCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT...AACTTTGACGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGTTGGTATGCTCCATTaGCCCGTTCAGCTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIVGMLH*PVQLFP
Trigger: CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAAC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACAACAAGTCCATCCAATaGACAGAGTACAAATTCCTT +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNNKSIQ*TEYKFL
Trigger: AAGGAATTTGTACTCTGTGCATTGGATGGACTTGTT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGTCTGAAACTACATATTaGAAAAGGACCCTGGACACT +
Preference number: 4 (lower is better)
Translates to: AWLLCMFLIREGLCATSSSETTY*KRTLDT
Trigger: AGTGTCCAGGGTCCTTTTGCAATATGTAGTTTCAGA...CGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGCAGCCACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGAATTCCTCAGTCTGCTaGACGTCCAAACCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWNSSVC*TSKPKP
Trigger: GGGTTTGGGTTTGGACGTGCAGCAGACTGAGGAATT...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS-3UTR CCA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGTCCCTTTTGGGAGTGTaGACTGAGAGCTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWSLLGV*TESCPL
Trigger: CAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGA...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGTGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATTGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGATATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: CIERCAVGVAALHVFNKGYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACTGCATTCTTCCACGTaGCCGCGTTGCGTCGGAAGT +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSLHSST*PRCVGS
Trigger: ACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCTTCCCGTATTGCGCTaGCTAAGTTGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFILPVLR*LSCPEW
Trigger: CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGACCCTTCAGCTTCCTCTaGATCGAGGGGCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRPFSFL*IEGLFF
Trigger: AAAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGG...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTCATGGTCAAAATCTaGACTGTGGTTGGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESVMVKI*TVVGCC
Trigger: ACAACAGCCAACCACAGTCCAGATTTTGACCATGAC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTATTTACAGCCTATCTTaGGTTAAGAATCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVIYSLS*VKNPRF
Trigger: AAACCTTGGATTCTTAACCCAAGATAGGCTGTAAAT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGAAACGGAGTTCAGCTaGAATATGGAAAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEETEFS*NMEKRG
Trigger: TCCTCTCTTTTCCATATTCCAGCTGAACTCCGTTTC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGAAGAGAAAACACACTaGAACATTGCCCTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEEEKTH*NIALCR
Trigger: CCTACAAAGGGCAATGTTCCAGTGTGTTTTCTCTTC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CCA 90 bp ACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCAAGTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: TLVAVGMLHCPVQLFPYCKFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAACTT...GCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSCCCCC*RRSCLA
Trigger: GGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTTGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSECCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCAAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAARSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp AGTGTTAGCTGCTTTTCTGGAGATTCGAGAATGGCCTGCCTAATTAAAGATGCACGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: SVSCFSGDSRMACLIKDARTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...TGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR TCA 90 bp TTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGCCTGGCCGGACTTGGAGAGAGTaGCACTTGATACCAGATTCA +
Preference number: 4 (lower is better)
Translates to: LRCFRNDWKSSHTASQPGRTWRE*HLIPDS
Trigger: TGAATCTGGTATCAAGTGTCACTCTCTCCAAGTCCG...GCCAGGCTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATTTAGAGAAACGTGGTaGTGTCTGAAGGAAGATGGA +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESFRETW*CLKEDG
Trigger: TCCATCTTCCTTCAGACATCACCACGTTTCTCTAAA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTCCTATATAAATAAATaGCAGGAAAGTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVSYINK*QESGCR
Trigger: TCTGCACCCACTTTCCTGTCATTTATTTATATAGGA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAGTAGCAGAGATTGCGTaGGCTACACTGGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSVAEIA*ATLGPR
Trigger: TCTTGGGCCCAGTGTAGCTCACGCAATCTCTGCTAC...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCAGTACTCCAGCCTGGGTaGCAAAGCTCAAAACTAAAA +
Preference number: 4 (lower is better)
Translates to: AVVYRGILFSAIEACKAAVLQPG*QSSKLK
Trigger: TTTTAGTTTTGAGCTTTGTCACCCAGGCTGGAGTAC...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSSCHLK*LLLLLL
Trigger: CAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
CDS-3UTR GCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGAAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRKDRRC*CCNCCI
Trigger: GATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTT...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWACGFF*SMSTCH
Trigger: GTGACAAGTGCTCATACTGCAGAAGAAACCACAGGC...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWWSDPN*CDCCLW
Trigger: CCACAGGCAACAATCACAGCAGTTTGGATCTGACCA...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGGAGGTCTTGGAAGGTaGAGAGGAGGAGACACATGT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIGGLGR*RGGDTC
Trigger: ACATGTGTCTCCTCCTCTGCACCTTCCAAGACCTCC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAATGGGTCCCACCGTGTaGATGCTGGTGGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSMGPTV*MLVVVM
Trigger: CATCACAACCACCAGCATGCACACGGTGGGACCCAT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGATTCGAGAATGGCCTaGCTAATTAAAGATGCATAT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVDSRMA*LIKDAY
Trigger: ATATGCATCTTTAATTAGGCAGGCCATTCTCGAATC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGGCAAAGGCTTGGTCTaGAGCTTAGGTGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIGKGLV*SLGAQA
Trigger: AGCTTGTGCACCTAAGCTGCAGACCAAGCCTTTGCC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAATGGGTAGCAGAGATTaGGTGAGCTACACTGGGCCC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSMGSRD*VSYTGP
Trigger: GGGCCCAGTGTAGCTCACGCAATCTCTGCTACCCAT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCAGAGGGAAGCCTTTTaGCTAGCAGGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIQREAF*LAGITS
Trigger: GGATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGCTGCTGCAGTTCTGTTaGAATCATGCCTTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVLLQFC*NHALSK
Trigger: CTTGCTCAAGGCATGATTCCAACAGAACTGCAGCAG...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTAGGAGACACATGTCGTaGTCAGATCCAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTRRHMS*SDPNCC
Trigger: ACAGCAGTTTGGATCTGACCACGACATGTGTCTCCT...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGACTTCACATGCAGGTaGGTCATCATGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIDFTCR*VIMACR
Trigger: CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCTAAGTTGCCCAGAGTaGGATTTCCCATGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFILSCPE*DFPWKR
Trigger: CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCACTCTCGTTGCTGTTaGTATGCTCCATTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIHSRCC*YAPLPR
Trigger: ACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGACATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: IERCAVGVAALHVFNKGRHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACAAGCTTATGAGTGGATaGGAGTGTTACTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNKLMSG*ECYFSL
Trigger: TAAAGAAAAGTAACACTCCCATCCACTCATAAGCTT...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTCCCATGACCCTGTCTaGCTACTGCCTGCACATCAT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFISHDPV*LLPAHH
Trigger: ATGATGTGCAGGCAGTAGCCAGACAGGGTCATGGGA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATGTCATCATAGCCACTaGCACGGGAACCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSCHHSH*HGNLKS
Trigger: GCTCTTCAGGTTCCCGTGTCAGTGGCTATGATGACA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAGATCCAAACTGCTGTaGTTGTTGCCTGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGRSKLL*LLPVVS
Trigger: AGAAACCACAGGCAACAATCACAGCAGTTTGGATCT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSPVKLH*EVCSRR
Trigger: ACGCCTACTGCACACCTCTCAATGCAGCTTTACAGG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACACTTTAGCATTTGCTaGACTCAGCCCTCGTTAACT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKHFSIC*TQPSLT
Trigger: AGTTAACGAGGGCTGAGTTCAGCAAATGCTAAAGTG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGGACTGAGGTTGTACTaGCCTGTAACCATCACATTT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGGLRLY*PVTITF
Trigger: AAATGTGATGGTTACAGGTCAGTACAACCTCAGTCC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATTGGATCCTCATTCCTaGCAGTGCATTTGTCTGACA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKLDPHS*QCICLT
Trigger: TGTCAGACAAATGCACTGTCAGGAATGAGGATCCAA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCACTGTTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGTGCTGGAGGATCTGCTaGATTTGCTGGGGAGTGATA +
Preference number: 4 (lower is better)
Translates to: SLLRCFRNDWKSSHTASQCWRIC*ICWGVI
Trigger: TATCACTCCCCAGCAAATGCAGCAGATCCTCCAGCA...CTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAACAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAGACAGGAGGTGCTGCTaGTGTAACTGCTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSDRRCC*CNCCIC
Trigger: ACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTC...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTTCTTTCCAGAGCTaGTGCAGTTCTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWTSFQS*CSSVGI
Trigger: GATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGT...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGNCCDC*LWFLLQ
Trigger: CTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCAAAAGGACTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: SLNMAATFKLFIINCPKGLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...TCCTTTTGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp TTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGCCTGGCCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LRCFRNDWKSSHTASQPGLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...GCCAGGCTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCTATCGTCCAGCGCATaGTCACTGTTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLSSSA*SLLRCF
Trigger: AAAACATCTCAACAGTGAGCATGCGCTGGACGATAG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTTCAGTTGGTTCTTCTaGAAGGCTGTGATACCTGCA +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGFSWFF*KAVIPA
Trigger: TGCAGGTATCACAGCCTTGCAGAAGAACCAACTGAA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGACTGGGCCCAAGAAATaGCTTCAGCATTGTAAATCT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLTGPKK*LQHCKS
Trigger: AGATTTACAATGCTGAAGGCATTTCTTGGGCCCAGT...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATACATGAAGCACCATaGTCACAGTCCGGACTGTAT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKIHEAP*SQSGLY
Trigger: ATACAGTCCGGACTGTGAGCATGGTGCTTCATGTAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACTGATAAAGCACTTATaGAGTGAGAGGTTGGTGCGA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKLIKHL*SERLVR
Trigger: TCGCACCAACCTCTCACTGCATAAGTGCTTTATCAG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS-3UTR CCA 90 bp GTATTTGCGAGGACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VFARTASLNMAATFKLFIVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...GATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAACATCCATCCGTTCATaGCTGACAGCAAATCAGAGA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKTSIRS*LTANQR
Trigger: TCTCTGATTTGCTGTCAGCCATGAACGGATGGATGT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAACAAACTTTCCCTTTTaGGAGTGTGGACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKTNFPF*ECGLRA
Trigger: AGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CCA 90 bp ATCATGGCTTGCAGGCGTTCTTTGTCTTTTGCAAGCTGTAGCTCTAACTGCTGTATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: IMACRRSLSFASCSSNCCICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...ACAGCAGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGCCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSECICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCATAGGAGATCTGCCTaGACTGCTGTCACTCTCGTT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIHRRSA*TAVTLV
Trigger: AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATACCAAGCTTATGAGTaGATGGGAGTGTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESYQAYE*MGVLLF
Trigger: GAAAAGTAACACTCCCATCCACTCATAAGCTTGGTA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATTTACTAGGTCTGACTaGATGCTGGGGATGGTGTTA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKFTRSD*MLGMVL
Trigger: TAACACCATCCCCAGCATCCAGTCAGACCTAGTAAA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTCTTCTTTGTGCCTTTaGAAACGGAGTTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGSSLCL*KRSSAG
Trigger: TCCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAGCCCAAATGGAGGCCTaGGGTCAGAACTTAAAATGG +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSAQMEA*GQNLKW
Trigger: CCATTTTAAGTTCTGACCTCAGGCCTCCATTTGGGC...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR GCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVSCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTGCGTGACCACAGACTaGCCTTTATACAGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFICVTTD*PLYRKQ
Trigger: CTGCTTTCTGTATAAAGGGCAGTCTGTGGTCACGCA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAG +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWCDCCL*FLLQYE
Trigger: CTCATACTGCAGAAGAAACCACAGGCAACAATCACA...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATGGGGGTGCTCCTCATaGGACAAACTTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSWGCSS*DKLSLL
Trigger: CAAAAGGGAAAGTTTGTCCCATGAGGAGCACCCCCA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSECFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTTATCTGCTGACGAAATaGGCACGTTGTATTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTYLLTK*ARCICL
Trigger: CAGACAAATACAACGTGCCCATTTCGTCAGCAGATA...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAGATGCATATGTAAATaGTGGTCTAACTTCTGCGTT +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACRCICK*WSNFCV
Trigger: AACGCAGAAGTTAGACCACCATTTACATATGCATCT...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGTAGAGTGCAGCATTTaGGACCTTTTTGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLVECSI*DLFEKD
Trigger: GTCTTTTTCAAAAAGGTCCCAAATGCTGCACTCTAC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAATTCCATTTTGTGGCTaGTCCAAGGGGCAGCCTAAC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSIPFCG*SKGQPN
Trigger: GTTAGGCTGCCCCTTGGACCAGCCACAAAATGGAAT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGCCCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVPTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGG...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR TCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGTCACGTCTTACCCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIVTSYP*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGGGTAAGACGTGAC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATGGGGAGTGATAACTTaGGGTGTCATCATAGCCACT +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSWGVIT*GVIIAT
Trigger: AGTGGCTATGATGACACCTCAAGTTATCACTCCCCA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR TCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGAGTTTCTTCTGCAGTATaGGCACTTGTCACTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRVSSAV*ALVTSF
Trigger: GAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAAC...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATACTGCTGCGTGGAATaGATCGGCATTGTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSYCCVE*IGIVPR
Trigger: TCTAGGAACAATGCCGATTCATTCCACGCAGCAGTA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCTTCTAAATTTACGATaGAGGAGCAGTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLLLNLR*RSSSLS
Trigger: AGAAAGAGAACTGCTCCTTCATCGTAAATTTAGAAG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGATACAGAAAGCAGAGTaGAGCTTCAAAAGTAACTGC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGIQKAE*SFKSNC
Trigger: GCAGTTACTTTTGAAGCTTCACTCTGCTTTCTGTAT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTAGCAATATCCTGTCCTaGAATTTTAACGTGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RLLVHLRNLCHGQNLDCGSNILS*NFNVSH
Trigger: GTGAGACACGTTAAAATTTCAGGACAGGATATTGCT...ACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATCAGTCCCAGATTCTTaGATCATGACTCAAAAACCT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKSVPDS*IMTQKP
Trigger: AGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTTCAGTTGGTTCTTCTaGAAGGCTGTGATACCTGCA +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIFSWFF*KAVIPA
Trigger: TGCAGGTATCACAGCCTTGCAGAAGAACCAACTGAA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCATACATGAAGCACCATaGTCACAGTCCGGACTGTAT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIIHEAP*SQSGLY
Trigger: ATACAGTCCGGACTGTGAGCATGGTGCTTCATGTAT...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTGTTTTGTTCGGAAACTaGAATTGTCAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: PMEAVVYRGILFSAIEACVLFGN*NCQQKL
Trigger: AAGCTTTTGTTGACAATTCCAGTTTCCGAACAAAAC...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGACCACTGATCTTTTGTaGCCTTCGTTTTTGGAATTC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGTTDLL*PSFLEF
Trigger: GAATTCCAAAAACGAAGGCCACAAAAGATCAGTGGT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGCATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp AGTGTTAGCTGCTTTTCTGGAGATTCGAGAATGGCCTGCCTAATTAAAGATGCACATGTCCTCGTTTACTaGTTCATCTTCGTAATCTCT +
Preference number: 4 (lower is better)
Translates to: SVSCFSGDSRMACLIKDAHVLVY*FIFVIS
Trigger: AGAGATTACGAAGATGAACCAGTAAACGAGGACATG...TGCATCTTTAATTAGGCAGGCCATTCTCGAATCTCCAGAAAAGCAGCTAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGTAGAGTGCAGCATTTaGGACCTTTTTGAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGVECSI*DLFEKD
Trigger: GTCTTTTTCAAAAAGGTCCCAAATGCTGCACTCTAC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACCCAATACTGCTGCGTaGAATGAATCGGCATTGTTC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSPNTAA*NESALF
Trigger: GAACAATGCCGATTCATTCCACGCAGCAGTATTGGG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGCTGGTAGAATGTGGTaGCATTTATTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGAGRMW*HLLMVA
Trigger: AGCAACCATTAATAAATGCCACCACATTCTACCAGC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATACCAAGCTTATGAGTaGATGGGAGTGTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKYQAYE*MGVLLF
Trigger: GAAAAGTAACACTCCCATCCACTCATAAGCTTGGTA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAGGAAGATGGAATGAGTaGCAGAAAGCTACAAACGAG +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSGRWNE*QKATNE
Trigger: CTCGTTTGTAGCTTTCTGTCACTCATTCCATCTTCC...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATCCTATATAAATAAATaGCAGGAAAGTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKSYINK*QESGCR
Trigger: TCTGCACCCACTTTCCTGTCATTTATTTATATAGGA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCAGCTGTAGCTCTAACTaGTGTACAACCTGCATTTGT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFISCSSN*CTTCIC
Trigger: ACAAATGCAGGTTGTACAGCAGTTAGAGCTACAGCT...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGTGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGCATATGTAAATGGTaGTCTAACTTCTGCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKCICKW*SNFCVL
Trigger: AAGAACGCAGAAGTTAGACCACCATTTACATATGCA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAGGAATCCTTAAATTCTaGGCAAAGGCTTGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSGILKF*AKAWSA
Trigger: TGCAGACCAAGCCTTTGCCCAGAATTTAAGGATTCC...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp GTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATTGAGAAATGCAAAGAGTGAGTaGCTCACACTTGTAATCCTA +
Preference number: 4 (lower is better)
Translates to: VYRGILFSAIEACKAALRNAKSE*LTLVIL
Trigger: TAGGATTACAAGTGTGAGCCACTCACTCTTTGCATT...TCTCAATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CCA 90 bp GCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGTCAAAGTTCTGAGGAAAAACTCCTaGCAACAGAATCAAAATCAA +
Preference number: 4 (lower is better)
Translates to: ALHVFNKGRVMCDKLVKVLRKNS*QQNQNQ
Trigger: TTGATTTTGATTCTGTTGCCAGGAGTTTTTCCTCAG...AACTTTGACGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327590.9
3UTR CAA 72 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATaGTGTCCTATTTTTATCTGCAGTAGCCCCATAAAA +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLI*CPIFICSSPIK
Trigger: TTTTATGGGGCTACTGCAGATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp TCACTGTTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGTGTTGTTGTAAAAGTTaGAGCTGCAACTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SLLRCFRNDWKSSHTASQCCCKS*SCNCSC
Trigger: ACAGGAACAGTTGCAGCTTCAACTTTTACAACAACA...CTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAACAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR GCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAGTTCTGTTGGAATCATaGCTTGAGCAAGAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSVLLES*LEQEVE
Trigger: TTCAACCTCTTGCTCAAGGCATGATTCCAACAGAAC...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTGTTTTAGAAATGATTaGAAATCTTCGCACACTGCT +
Preference number: 4 (lower is better)
Translates to: STCSTVQIGRPLESLNSGCFRND*KSSHTA
Trigger: AGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCATTTGTACTCTACATTaGGCTGTACTTCTATCGTCC +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIICTLH*AVLLSS
Trigger: GGACGATAGAAGTACAGCCCAATGTAGAGTACAAAT...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR CAA 72 bp GTCTGTATCCGCAGACATGGAATGATGGAATTACAGTaGATGTCAAGGAATGAGTTTCTTTTATGCCTTATC +
Preference number: 4 (lower is better)
Translates to: VCIRRHGMMELQ*MSRNEFLLCLI
Trigger: GATAAGGCATAAAAGAAACTCATTCCTTGACATCAACTGTAATTCCATCATTCCATGTCTGCGGATACAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAAAACTTGGAAAAGTGTaGCCCTGGAATTTCATCATG +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSKLGKV*PWNFIM
Trigger: CATGATGAAATTCCAGGGTCACACTTTTCCAAGTTT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCATACCAAGCTTATGAGTaGATGGGAGTGTTACTTTTC +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSYQAYE*MGVLLF
Trigger: GAAAAGTAACACTCCCATCCACTCATAAGCTTGGTA...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR TCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACTTCTAAATTTACGATaGAGGAGCAGTTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSLLNLR*RSSSLS
Trigger: AGAAAGAGAACTGCTCCTTCATCGTAAATTTAGAAG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR GCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTGGTGGTCTAACTTCTaGGTTCTTATAAAATTCTTG +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIWWSNF*VLIKFL
Trigger: CAAGAATTTTATAAGAACGCAGAAGTTAGACCACCA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCATTTACAGCCTATCTTaGGTTAAGAATCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIIYSLS*VKNPRF
Trigger: AAACCTTGGATTCTTAACCCAAGATAGGCTGTAAAT...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CCA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAAAGCTTATGAGTGGATaGGAGTGTTACTTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSKLMSG*ECYFSL
Trigger: TAAAGAAAAGTAACACTCCCATCCACTCATAAGCTT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
3UTR CAA 72 bp GTTAACTCCCTTAACAAGTTCAATCTGAAATCGAATTaGCATTCAAACAGTTTAATGCCACCAAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VNSLNKFNLKSN*HSNSLMPPSRS
Trigger: AGACCTACTTGGTGGCATTAAACTGTTTGAATGCAAATTCGATTTCAGATTGAACTTGTTAAGGGAGTTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS GCA 90 bp CATGCAGCCCTGTTGCTGCTGCTGCTGGGCGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGGCGTCTCTCCGTTGGACCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: HAALLLLLLGVGEVS*PDVHGRRLSVGPPL
Trigger: GAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGGCTGCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648826.1
CDS GCA 90 bp GAGATGCCACTGTTGCTGCTGCTGCTGGGCGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGGCGTCTCTCCGTTGGACCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: EMPLLLLLLGVGEVS*PDVHGRRLSVGPPL
Trigger: GAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGTGGCATCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318779.7
ENST00000622151.4
ENST00000648107.1
ENST00000648662.1
CDS GCA 90 bp TCTTGCCACCTGTTGCTGCTGCTGCTGGGCGTGGGCGAGGTCAGCTaGCCCGATGTCCACGGCCGGCGTCTCTCCGTTGGACCGCCCCTC +
Preference number: 5 (lower is better)
Translates to: SCHLLLLLLGVGEVS*PDVHGRRLSVGPPL
Trigger: GAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGTGGCAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649431.1
CDS GCA 90 bp GAGGGGCCAGGACAGAGAGGGCAGCGGGCTCCGAGGACCCGCGAGTaGGCGTGGAGGGAAGAGAGGATGCGGCTCAGGGAATCCCTGCAA +
Preference number: 5 (lower is better)
Translates to: EGPGQRGQRAPRTRE*AWREERMRLRESLQ
Trigger: TTGCAGGGATTCCCTGAGCCGCATCCTCTCTTCCCTCCACGCGCACTCGCGGGTCCTCGGAGCCCGCTGCCCTCTCTGTCCTGGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648895.1
ENST00000649610.1
CDS CCA 90 bp GGGCGAGGTCAGCTGCCCCGATGTCCACGGCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: GRGQLPRCPRPASLR*TAPPEDRRTLVSGC
Trigger: GCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS GCA 90 bp GCTTCTGGGACACGGCCTGAGGATGGGCACATTCCTCGCTCCCGGTaGCTTATCGCTAGGCTCGCGCCACCCCGGCTGGCTCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: ASGTRPEDGHIPRSR*LIARLAPPRLALWG
Trigger: TCCCCAAAGAGCCAGCCGGGGTGGCGCGAGCCTAGCGATAAGGCACCGGGAGCGAGGAATGTGCCCATCCTCAGGCCGTGTCCCAGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000647649.1
ENST00000648192.1
ENST00000649328.1
ENST00000650068.1
CDS GCA 90 bp CGAAGCACCTACCGGCCTGAGGATGGGCACATTCCTCGCTCCCGGTaGCTTATCGCTAGGCTCGCGCCACCCCGGCTGGCTCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: RSTYRPEDGHIPRSR*LIARLAPPRLALWG
Trigger: TCCCCAAAGAGCCAGCCGGGGTGGCGCGAGCCTAGCGATAAGGCACCGGGAGCGAGGAATGTGCCCATCCTCAGGCCGGTAGGTGCTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650231.1
CDS GCA 90 bp AGCGGGCTCCGAGGACCCGCGAGTGCGCGTGGAGGGAAGAGAGGATaGGGCTCAGGGAATCCCTGCAAGGATCCAGAGACCGGGAAATCG +
Preference number: 5 (lower is better)
Translates to: SGLRGPASARGGKRG*GSGNPCKDPETGKS
Trigger: CGATTTCCCGGTCTCTGGATCCTTGCAGGGATTCCCTGAGCCGCATCCTCTCTTCCCTCCACGCGCACTCGCGGGTCCTCGGAGCCCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648895.1
ENST00000649610.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGGAGCGGCTCCCTCTTaGCCGTTCGCCGGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLGAAPS*PFAGAL
Trigger: CAGCGCCCCGGCGAACGGCAAAGAGGGAGCCGCTCC...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318789.10
ENST00000615603.4
CDS-3UTR CAA 90 bp CCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: PLPRSALPVLRWLSCPEWAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...CCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS GCA 90 bp CTGCTGCTGTTGCTGCTGAAGAAGGAGCTGTCTTGCCACCTGAAGTaGCTGTTGCTGCTGCTGCTGGGCGTGGGCGAGGTCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LLLLLLKKELSCHLK*LLLLLLGVGEVSCP
Trigger: GGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS GCA 90 bp GCGAGTGCGCGTGGAGGGAAGAGAGGATGCGGCTCAGGGAATCCCTaGAAGGATCCAGAGACCGGGAAATCGGCCCGAGCCAAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: ASARGGKRGCGSGNP*KDPETGKSARAKVS
Trigger: TGAGACTTTGGCTCGGGCCGATTTCCCGGTCTCTGGATCCTTGCAGGGATTCCCTGAGCCGCATCCTCTCTTCCCTCCACGCGCACTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648895.1
ENST00000649610.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS GCA 90 bp GCTCGCTCGCCGCGCGCTCTCTTCCTCTTACAAACTTTCGGGTTCTaGAGTCGACAAGAAACCGGGGCGACCCTCAGCAAGTCTTCCCCG +
Preference number: 5 (lower is better)
Translates to: ARSPRALFLLQTFGF*SRQETGATLSKSSP
Trigger: CGGGGAAGACTTGCTGAGGGTCGCCCCGGTTTCTTGTCGACTGCAGAACCCGAAAGTTTGTAAGAGGAAGAGAGCGCGCGGCGAGCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648895.1
ENST00000649610.1
CDS CCA 90 bp TCTCCGTTGGACCGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCATTCTGGATGGCTGAACCGTTACTT +
Preference number: 5 (lower is better)
Translates to: SPLDRPSRRPPHSSK*LLPPDPFWMAEPLL
Trigger: AAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS CCA 90 bp CCGCTCCAGGTCTGCAAGCAGCGACACAGCACACGCAGTGCGCCCTaGCTAGACCAAGCCCTAGCCAAACACAGCTCATTCACGCAGACA +
Preference number: 5 (lower is better)
Translates to: PLQVCKQRHSTRSAP*LDQALAKHSSFTQT
Trigger: TGTCTGCGTGAATGAGCTGTGTTTGGCTAGGGCTTGGTCTAGCCAGGGCGCACTGCGTGTGCTGTGTCGCTGCTTGCAGACCTGGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648748.2
ENST00000649695.2
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAADDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGGGGCCTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: PADGSHRVHAGGCDDRGASRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...GGCCCCTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS GCA 90 bp CGTTGGACCGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCTGGATGGCTGAACCGTTACTTTTTG +
Preference number: 5 (lower is better)
Translates to: RWTAPPEDRRTLVSG*CRPTHSGWLNRYFL
Trigger: CAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS GCA 90 bp TCCACTAACTTGCTGCTGCTGTTGCTGCTGAAGAAGGAGCTGTCTTaGCACCTGTTGCTGCTGCTGCTGGGCGTGGGCGAGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: STNLLLLLLLKKELS*HLLLLLLGVGEVSC
Trigger: GCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649431.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRADDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CAATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QSSFSGLARPDSHSMSSFDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...AAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLSSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS GCA 90 bp TGGACCGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTGGTTGCTaGCGCCCGACCCATTCTGGATGGCTGAACCGTTACTTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: WTAPPEDRRTLVSGC*RPTHSGWLNRYFLS
Trigger: AGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS GCA 90 bp TCCACTAACTTGCTGCTGCTGTTGCTGCTGAAGAAGGAGCTGTCTTaGCACCTGAAGTGCCTGTTGCTGCTGCTGCTGGGCGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: STNLLLLLLLKKELS*HLKCLLLLLLGVGE
Trigger: CTCGCCCACGCCCAGCAGCAGCAGCAACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGGCCTCGTTGGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: DKLVKVFIGAVFARTASLDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...CAACGAGGCCGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSSRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSSSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS GCA 90 bp AGGGTTAGGCTGACACACAGGTCCACTCATCTTCGTCTCAGCAACTaGTCCCCACAAGGGGACCTGCAGGACTTCCAACTCCCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: RVRLTHRSTHLRLSN*SPQGDLQDFQLPRA
Trigger: AGCCCTTGGGAGTTGGAAGTCCTGCAGGTCCCCTTGTGGGGAGCAGTTGCTGAGACGAAGATGAGTGGACCTGTGTGTCAGCCTAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318779.7
ENST00000622151.4
ENST00000648107.1
ENST00000648662.1
CDS GCA 90 bp TGGCGAAGGGAGCCCGTACTGTCTGCCTTTGGATTTCCGTCTTCTTaGTGTAGATGGGTTCTGGCTGTTTCTGCGAAGCGGGGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: WRREPVLSAFGFPSS*CRWVLAVSAKRGLP
Trigger: CGGCAACCCCCGCTTCGCAGAAACAGCCAGAACCCATCTACAGCAAGAAGACGGAAATCCAAAGGCAGACAGTACGGGCTCCCTTCGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491238.7
ENST00000648748.2
ENST00000649659.1
ENST00000649695.2
ENST00000674446.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGGAGCGGCTCCCTCTTaGCCGTTCGCCGGGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESGAAPS*PFAGAL
Trigger: CAGCGCCCCGGCGAACGGCAAAGAGGGAGCCGCTCC...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318789.10
ENST00000615603.4
CDS-3UTR CAA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: RCCWYAPLPRSALPVLRWHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...CCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp CTGTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: LLSLRTGALQLPLDRGALHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...AAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: IERCAVGVAALHVFNKGRAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTGATGACAGAGGGGCCTaGGGTGACGGGAGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGDDRGA*GDGSQG
Trigger: CCCCTGACTCCCGTCACCCAAGGCCCCTCTGTCATC...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQSRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGSSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTTATGCAGTGAGAGGTaGGTGCGAATGGCACCCTTC +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSLCSER*VRMAPF
Trigger: GAAGGGTGCCATTCGCACCAACCTCTCACTGCATAA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS CCA 90 bp GTTGAGTTAGCTACATTCAGAGCCGGTTCAGCTGGGAGTACCCCGTaGCAATTCCTCAGTCTGCTGCACGTCCAAACCCAAACCCCGCTC +
Preference number: 5 (lower is better)
Translates to: VELATFRAGSAGSTP*QFLSLLHVQTQTPL
Trigger: GAGCGGGGTTTGGGTTTGGACGTGCAGCAGACTGAGGAATTGCCACGGGGTACTCCCAGCTGAACCGGCTCTGAATGTAGCTAACTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCACACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRAHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: YRLRMGPTVCMLVVVMTELGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...CTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQNCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: SGLARPDSHSMSSFTGSSSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...AGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: APFSSSRIALAKLPRVGFSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDSRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVSSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTGCGAGGACGGCCTCGTaGAATATGGCGGCCACGTTT +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLARTAS*NMAATF
Trigger: AAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGC...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615603.4
CDS TCA 90 bp CTTAAGAGCTGTAACGCTCACCGCGAAGGTCTGCAGCTTCACGCCTaGGCCAGCGAGACCACGAACCCACCAGAAGGAAGAAACTCCAAA +
Preference number: 5 (lower is better)
Translates to: LKSCNAHREGLQLHA*ASETTNPPEGRNSK
Trigger: TTTGGAGTTTCTTCCTTCTGGTGGGTTCGTGGTCTCGCTGGCTCAGGCGTGAAGCTGCAGACCTTCGCGGTGAGCGTTACAGCTCTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTACAGAGGGAAGCCTTTaGGCTAGCAGGCATCACATC +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAATEGSL*ASRHHI
Trigger: GATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTGT...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTCACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQREEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: YRLRMGPTVCMLVVVMTENLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...CTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSNCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: AVTLVAVGMLHCPVQLFPTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...CGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 5 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGAGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSRIALAKLPRVGFPMEACWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRACWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSRIALAKLPRVGFPMEAYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRASRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: SSRIALAKLPRVGFPMEASRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...CGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMASRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATTCCTGACAGTGCATTaGTCTGACACACGGGACTAC +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGFLTVH*SDTRDY
Trigger: GTAGTCCCGTGTGTCAGACAAATGCACTGTCAGGAA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTTCCTGACAGTGCATTaGTCTGACACACGGGACTAC +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFFLTVH*SDTRDY
Trigger: GTAGTCCCGTGTGTCAGACAAATGCACTGTCAGGAA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTCTTGCACTCACGAGTTaGAAGCCAGCCAGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: GWPAPIVTPCPRLLVHLRLALTS*KPARAR
Trigger: TCTTGCCCTGGCTGGCTTCAAACTCGTGAGTGCAAG...ACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp CAATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTTTATGCAGTGAGAGGTaGGTGCGAATGGCACCCCAC +
Preference number: 5 (lower is better)
Translates to: QSSFSGLARPDSHSMSSFLCSER*VRMAPH
Trigger: GTGGGGTGCCATTCGCACCAACCTCTCACTGCATAA...AAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTACTCTTGAAGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVLLKLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCTTCAAGAG...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648384.1
CDS CCA 90 bp AGACCGCCGCACTCTAGTAAGTGGTTGCTGCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTTTTTGTCTCAGTCCCAGATTCTTGC +
Preference number: 5 (lower is better)
Translates to: RPPHSSKWLLPPDPF*MAEPLLFVSVPDSC
Trigger: GCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 31 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000471386.3
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648783.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS-3UTR CAA 90 bp TACCGCCTGCGGATGGGTCCCACCGTGTGCATGCTGGTGGTTGTGATGACAGAGCTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: YRLRMGPTVCMLVVVMTELSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...CTCTGTCATCACAACCACCAGCATGCACACGGTGGGACCCATCCGCAGGCGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTCACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TGCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: CCHSRCCWYAPLPRSALPEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: APFSSSRIALAKLPRVGFLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSNCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRANCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: CIERCAVGVAALHVFNKGAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCAGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: FSGLARPDSHSMSSFTGSAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...TGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGLARPDSHSMSSFTGSSDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...AGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: APFSSSRIALAKLPRVGFDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAADKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: QGLRGGFGFCRLHMQVGHACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...ATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CAA 90 bp CTGTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LLSLRTGALQLPLDRGALVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...AAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GLARPDSHSMSSFTGSSSVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...CGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 5 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: LPRSALPVLRWLSCPEWDDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...ATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: SRGWPAPIVTPCPRLLVHDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...ATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: YRMHGLHRRSAWTAVTLVSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp ATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGTTTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: MHGLHRRSAWTAVTLVAVSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...AACAGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGATACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp AATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTATCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: NLHSRGWPAPIVTPCPRLSRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...TAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCTCTTCTTTGTGCCTTaGGAAACGGAGTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAALFFVP*ETEFSW
Trigger: CCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGAG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAAACACACTGGAACATaGCCCTTTGTAGGCAACCTC +
Preference number: 5 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQKHTGT*PFVGNL
Trigger: GAGGTTGCCTACAAAGGGCAATGTTCCAGTGTGTTT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS TCA 90 bp AGGAGGTGCTGCTGCTGTAACTGCTGCATCTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTAGCCACCTGCTGTTGCTCTTTAGGC +
Preference number: 5 (lower is better)
Translates to: RRCCCCNCCICKSCC*KANCWVATCCCSLG
Trigger: GCCTAAAGAGCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 34 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000491238.7
ENST00000493089.7
ENST00000497553.3
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000647614.1
ENST00000647776.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649431.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS TCA 90 bp AAAGGACCCAAACTCATCCTCTACTCTGATAAAGCACTTATGCAGTaGGAGGTTGGTGCGAATGGCACCCTTCCACGTGGCCGCGTTGCG +
Preference number: 5 (lower is better)
Translates to: KGPKLILYSDKALMQ*EVGANGTLPRGRVA
Trigger: CGCAACGCGGCCACGTGGAAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGGGTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615603.4
ENST00000648426.1
CDS TCA 90 bp CTCTTGGGAGATTTTAATCCACTAACTTGCTGCTGCTGTTGCTGCTaGAGAAGGAGCTGTCTTGCCACCTGTTGCTGCTGCTGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: LLGDFNPLTCCCCCC*RRSCLATCCCCCWA
Trigger: CGCCCAGCAGCAGCAGCAACAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAGTTAGTGGATTAAAATCTCCCAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649431.1
CDS GCA 90 bp GGTCCACTCATCTTCGTCTCAGCAACTGCTCCCCACAAGGGGACCTaGAGGACTTCCAACTCCCAAGGGCTTGAAATTAGTCTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: GPLIFVSATAPHKGT*RTSNSQGLEISLLS
Trigger: GCTTAAGAGACTAATTTCAAGCCCTTGGGAGTTGGAAGTCCTGCAGGTCCCCTTGTGGGGAGCAGTTGCTGAGACGAAGATGAGTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318779.7
ENST00000622151.4
ENST00000648107.1
ENST00000648662.1
CDS GCA 90 bp GTCCAAAAGGACCCAAACTCATCCTCTACTCTGATAAAGCACTTATaGAGTGAGAGGTTGGTGCGAATGGCACCCTTCCACGTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: VQKDPNSSSTLIKHL*SERLVRMAPFHVAA
Trigger: CGCGGCCACGTGGAAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGGGTCCTTTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615603.4
ENST00000648426.1
CDS CCA 90 bp CGCCGCACTCTAGTAAGTGGTTGCTGCCGCCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTGTCTCAGTCCCAGATTCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: RRTLVSGCCRPTHSG*LNRYFLSQSQILAS
Trigger: TGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 31 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000471386.3
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648783.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS-3UTR CAA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TCTGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SGSRGSSLTCTGCTACIGEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...TCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp CGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: RCCWYAPLPRSALPVLRWNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...CCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCACTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRALGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: RGGFGFCRLHMQVGHHGLLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...CAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PAPIVTPCPRLLVHLRNLLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...GAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CWYAPLPRSALPVLRWLSGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...ACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTAAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVNCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLNCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTCTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SGLARPDSHSMSSFTGSSLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...AGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTAACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: CHSRCCWYAPLPRSALPVTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...TACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRADKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: SRIALAKLPRVGFPMEAVACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...TACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SRCCWYAPLPRSALPVLRVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...GCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp ATTCAAGGGCTGAGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: IQGLRGGFGFCRLHMQVGVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...ACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCTCAGCCCTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648321.1
ENST00000648384.1
ENST00000648654.1
CDS-3UTR CAA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp ATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: IEGLFFDVYRMHGLHRRSSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...AGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTCTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: RMHGLHRRSAWTAVTLVALLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...AGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp ACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: TGCTACIGDLPGLLSLSLLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...CAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLSRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSESSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCTGCCAGAGAAGTTTTaGTACCAAGCTTATGAGTGG +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQLPEKF*YQAYEW
Trigger: CCACTCATAAGCTTGGTACAAAAACTTCTCTGGCAG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCTCTTCTTTGTGCCTTaGGAAACGGAGTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSLFFVP*ETEFSW
Trigger: CCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGAG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGAGGCATGAGAATCGTTaGAACCTGGGAGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: HSRCCWYAPLPRSALPVLRHENR*NLGGTG
Trigger: ACCTGTGCCTCCCAGGTTCAAACGATTCTCATGCCT...CAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS TCA 90 bp TCCGGGAAGCCTTTTGTGGAGTTGTACCGTTTGTTTCTTATTGTCTaGGAAGCAGTTAGGAGCTTTCTCCCGGAGGGGGCCTCTCAACCC +
Preference number: 5 (lower is better)
Translates to: SGKPFVELYRLFLIV*EAVRSFLPEGASQP
Trigger: GGGTTGAGAGGCCCCCTCCGGGAGAAAGCTCCTAACTGCTTCTCAGACAATAAGAAACAAACGGTACAACTCCACAAAAGGCTTCCCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS TCA 90 bp ATGTGGCTAGTAGCTACCATACTAGACAGCCCAGGAAGAGCCTACTaGGCTCCCTCATGCAGCTTCGTGGATGACGAGAACTCCTGCAAA +
Preference number: 5 (lower is better)
Translates to: MWLVATILDSPGRAY*APSCSFVDDENSCK
Trigger: TTTGCAGGAGTTCTCGTCATCCACGAAGCTGCATGAGGGAGCTCAGTAGGCTCTTCCTGGGCTGTCTAGTATGGTAGCTACTAGCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS GCA 90 bp AGAACCCAAACGACATGCCAGATGCTACTGGAAGCTGGGCATCACTaGCCTCAAGAAATTCCTCCAGGCTGCACCATCGCTCTTCAAAGT +
Preference number: 5 (lower is better)
Translates to: RTQTTCQMLLEAGHH*PQEIPPGCTIALQS
Trigger: ACTTTGAAGAGCGATGGTGCAGCCTGGAGGAATTTCTTGAGGGCAGTGATGCCCAGCTTCCAGTAGCATCTGGCATGTCGTTTGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647741.1
ENST00000649081.1
CDS CCA 90 bp ACATTTGCTAAGAACCCAAACGACATGCCAGATGCTACTGGAAGCTaGGCATCACTGCCCTCAAGAAATTCCTCCAGGCTGCACCATCGC +
Preference number: 5 (lower is better)
Translates to: TFAKNPNDMPDATGS*ASLPSRNSSRLHHR
Trigger: GCGATGGTGCAGCCTGGAGGAATTTCTTGAGGGCAGTGATGCCCAGCTTCCAGTAGCATCTGGCATGTCGTTTGGGTTCTTAGCAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647741.1
ENST00000649081.1
CDS CCA 90 bp GTGGCTCACAAGAATCATGTACAGGCCAATTTGGGACAGAAAATTTaGACAGGAGTGGCTTACTTGTCCCGTGCACCCCACTCCCACGGT +
Preference number: 5 (lower is better)
Translates to: VAHKNHVQANLGQKI*TGVAYLSRAPHSHG
Trigger: ACCGTGGGAGTGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTACATGATTCTTGTGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTCTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRLSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQLNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAACACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SLLLVCSIAPFSSSRIALNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...CAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TACAGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: YRMHGLHRRSAWTAVTLVAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...AACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCACTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMALQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp ACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: TLVAVGMLHCPVQLFPYCDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...GCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: GAQALSGVLSVQRWQDCSSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...ACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTCTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAALYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTAGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: NLHSRGWPAPIVTPCPRLACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...TAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp GCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: AWLLCMFLIREGLCATSSMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...CGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGCAGCCACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AAGCTCTGTGGAGAAGCCTCCGATGCGGACTTGGAGAGAGTGACACTTGATACCGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: KLCGEASDADLERVTLDTDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...GGTATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGCTTCTCCACAGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTATTTGCGAGGACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: VFARTASLNMAATFKLFICWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...GATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AAGATTATGACGCACTGCATTCTTCCACGTGGCCGCGTTGCGTCGGAAGTAAGCCTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: KIMTHCILPRGRVASEVSLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...GCTTACTTCCGACGCAACGCGGCCACGTGGAAGAATGCAGTGCGTCATAATCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSSRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESSSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGTGGAATGAATCGGCATaGTTCCTAGAGTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: GLQLRCTSSVGRPQCPTLWNESA*FLEFVS
Trigger: AGAGACAAACTCTAGGAACAATGCCGATTCATTCCA...CAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGCCTATCGCTTGTCATTaGCCTCTAAATTCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: CSLGAQALSGVLSVQRWQPIACH*PLNSFA
Trigger: GGCAAAAGAATTTAGAGGCAAATGACAAGCGATAGG...CTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTTCCTGACAGTGCATTaGTCTGACACACGGGACTAC +
Preference number: 5 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVFLTVH*SDTRDY
Trigger: GTAGTCCCGTGTGTCAGACAAATGCACTGTCAGGAA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTCCGTACTGTCTGCCTTaGGATTTCCGTCTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVPYCLP*DFRLLA
Trigger: AGCAAGAAGACGGAAATCCAAAGGCAGACAGTACGG...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGAGAAAATGAAGAGTTaGGCGAAGGGAGCCCGTACT +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVEKMKS*AKGART
Trigger: AGTACGGGCTCCCTTCGCCAAACTCTTCATTTTCTC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS TCA 90 bp AGGAGGTGCTGCTGCTGTAACTGCTGCATCTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTAGCCACCTGCTCTTTAGGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RRCCCCNCCICKSCC*KANCWVATCSLGCF
Trigger: AAAACAGCCTAAAGAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485326.7
CDS GCA 90 bp GTCCAAAAGGACCCAAACTCATCCTCTACTCTGATAAAGCACTTATaGAGTGAGAGGTTGGTGCGAATGGCACCCTGGGATAGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: VQKDPNSSSTLIKHL*SERLVRMAPWDRSS
Trigger: GCTGCTCCTATCCCAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGGGTCCTTTTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000650580.1
CDS GCA 90 bp GGCTTAGGTAGTAACAGGCTTGGGTCCTCCCTCCAGAGACCTCTCTaGAGATTTTTAGGAGTTAGCCTGACTCCAGACTCCAACAGAAAG +
Preference number: 5 (lower is better)
Translates to: GLGSNRLGSSLQRPL*RFLGVSLTPDSNRK
Trigger: CTTTCTGTTGGAGTCTGGAGTCAGGCTAACTCCTAAAAATCTGCAGAGAGGTCTCTGGAGGGAGGACCCAAGCCTGTTACTACCTAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000648113.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSLSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAALNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGA +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSAGVSP*DRPSRR
Trigger: TCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGC...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: IERCAVGVAALHVFNKGRLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTATTTGCGAGGACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: VFARTASLNMAATFKLFINCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...GATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGCAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AATCTTCATTCTCGGGGTTGGCCCGCCCCGATAGTCACTCCATGTCCTCGTTTACTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: NLHSRGWPAPIVTPCPRLLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...TAAACGAGGACATGGAGTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGACAAACTTTCCCTTTaGGGAGTGTGGACTGAGAGC +
Preference number: 5 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLDKLSL*GVWTES
Trigger: GCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAAAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: LPVLRWLSCPEWDFPWKRHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...CCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp AGGGGCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: RGGFGFCRLHMQVGHHGLLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...CAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CAA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: LSLRTGALQLPLDRGALLGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp GCGGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTGCAGGGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: AALGSVDFTCRWVIMACRGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...CCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CAA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AGCTGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: SCIERCAVGVAALHVFNKIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...CTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTTCAGCTCTTCCCGTATaGCGCTGGCTAAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCSALPV*RWLSCP
Trigger: TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGA...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGTGTTGGTATGCTCCATaGCCCCGTTCAGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: IERCAVGVAALHVFNKGRCWYAP*PRSALP
Trigger: GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACA...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSESLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGTCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: IERCAVGVAALHVFNKGRSLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTATAGAGGTCTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: LAKLPRVGFPMEAVVYRGLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...ACCTCTATACACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMASQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTCCTATCGCTTGTCATTaGCCTCTAAATTCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAAPIACH*PLNSFA
Trigger: GGCAAAAGAATTTAGAGGCAAATGACAAGCGATAGG...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCACTGCCAGAGAAGTTTTaGTACCAAGCTTATGAGTGG +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMALPEKF*YQAYEW
Trigger: CCACTCATAAGCTTGGTACAAAAACTTCTCTGGCAG...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAACTCTTGAAGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSELLKLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCTTCAAGAG...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649596.1
CDS-3UTR CAA 90 bp GTTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTGCTTGCAGGCGTTCTTaGTCTTTTGCAAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: VVTKDRGPSASSGSRGSSACRRS*SFASLE
Trigger: TTCTAAACTTGCAAAAGACAAAGAACGCCTGCAAGC...AGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS TCA 90 bp AATTCGCAGCATACATGTTCCAAAACAGTATCGCAGCTTCACTCCTaGAGCCAGCGAGACTACGAACCCACCGGGAGGAATGAACAACTC +
Preference number: 5 (lower is better)
Translates to: NSQHTCSKTVSQLHS*SQRDYEPTGRNEQL
Trigger: GAGTTGTTCATTCCTCCCGGTGGGTTCGTAGTCTCGCTGGCTTCAGGAGTGAAGCTGCGATACTGTTTTGGAACATGTATGCTGCGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS GCA 90 bp TGGAAGGTGCAGAGGAGGAGACACATGTCGTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGGTTTCTTCTGCAGTATGAGCACTTG +
Preference number: 5 (lower is better)
Translates to: WKVQRRRHMSWSDPN*CDCCLWFLLQYEHL
Trigger: CAAGTGCTCATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTGCACCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 39 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS GCA 90 bp TACATAAGAACAGAGGGACAATGCAAAGCTGTCAGCAATGTCCCCTaGCCATATAGGGGGAACAGAATTGGGTGTGAGTGCGTGCCACTA +
Preference number: 5 (lower is better)
Translates to: YIRTEGQCKAVSNVP*PYRGNRIGCECVPL
Trigger: TAGTGGCACGCACTCACACCCAATTCTGTTCCCCCTATATGGGCAGGGGACATTGCTGACAGCTTTGCATTGTCCCTCTGTTCTTATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 90 bp GCTTTTAAGGAATATCCACAAGGCACGTTTATTGCCAACAGGCGATaGAGAGTAGGGTATGCCAGGGGAGGGTCGTTCCTAAATAAGGGG +
Preference number: 5 (lower is better)
Translates to: AFKEYPQGTFIANRR*RVGYARGGSFLNKG
Trigger: CCCCTTATTTAGGAACGACCCTCCCCTGGCATACCCTACTCTCCATCGCCTGTTGGCAATAAACGTGCCTTGTGGATATTCCTTAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644199.1
CDS CCA 90 bp TTCTCCCCGTCACTGATTTGCAGGGCGGGTGTGTGTGCACACCTCTaGGGTTGGACTTCTCTATTCAAGGAAACTAGGTGTAAAATTCTG +
Preference number: 5 (lower is better)
Translates to: FSPSLICRAGVCAHL*GWTSLFKETRCKIL
Trigger: CAGAATTTTACACCTAGTTTCCTTGAATAGAGAAGTCCAACCCCAGAGGTGTGCACACACACCCGCCCTGCAAATCAGTGACGGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000648113.1
CDS CCA 90 bp AGAATCATGTACAGGCCAATTTGGGACAGAAAATTTGGACAGGAGTaGCTTACTTGTCCCGTGCACCCCACTCCCACGGTAAGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: RIMYRPIWDRKFGQE*LTCPVHPTPTVSFQ
Trigger: CTGAAAGCTTACCGTGGGAGTGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTACATGATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS-3UTR CAA 90 bp AGGATGCACGGCTTGCATAGGAGATCTGCCTGGACTGCTGTCACTCTCGTTGCTCTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: RMHGLHRRSAWTAVTLVALNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...AGCAACGAGAGTGACAGCAGTCCAGGCAGATCTCCTATGCAAGCCGTGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CIERCAVGVAALHVFNKGGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp ACGGCCTCGTTGAATATGGCGGCCACGTTTAAACTCTTCATCATCAACTGTCCAACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: TASLNMAATFKLFIINCPTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...TGGACAGTTGATGATGAAGAGTTTAAACGTGGCCGCCATATTCAACGAGGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp TCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: SVGRPQCPTLAGLQFKVCSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...GCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GSRGSSLTCTGCTACIGDLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...ATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCTGTCACTCTCGTTGCTGTTGGTATGCTCCATTGCCCCGTTCAGCTCTTCCCTACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: CCHSRCCWYAPLPRSALPYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...GGGAAGAGCTGAACGGGGCAATGGAGCATACCAACAGCAACGAGAGTGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRAYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TATGCTCCATTGCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCATACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: YAPLPRSALPVLRWLSCPYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...TGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGCAATGGAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTCCCATGGAAGCGGTAGTGTACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: RIALAKLPRVGFPMEAVVYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...CACTACCGCTTCCATGGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAATACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAATTGCGCTGGCTAAGTaGCCCAGAGTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESIALAK*PRVGFP
Trigger: GGGAAATCCCACTCTGGGCAACTTAGCCAGCGCAAT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTCTTCATTCTCGGGGTaGGCCCGCCCCGATAGTCAC +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGSSFSG*ARPDSH
Trigger: GTGACTATCGGGGCGGGCCAACCCCGAGAATGAAGA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGATTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: QLRCTSSVGRPQCPTLAGFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...TCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: CTSSVGRPQCPTLAGLQFFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...GAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GGCTTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAATTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GLVCSLGAQALSGVLSVQFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...TTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAACCTCAGTGTCCAACGTaGGCAGGACTGCAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEPQCPT*AGLQFK
Trigger: TTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGG...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATGGAATGAATCGGCATaGTTCCTAGAGTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAWNESA*FLEFVS
Trigger: AGAGACAAACTCTAGGAACAATGCCGATTCATTCCA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCCCTATCGCTTGTCATTaGCCTCTAAATTCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSPIACH*PLNSFA
Trigger: GGCAAAAGAATTTAGAGGCAAATGACAAGCGATAGG...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGCAGCGCAATAGCCTATCGCTaGTCATTTGCCTCTAAATTC +
Preference number: 5 (lower is better)
Translates to: FLAGRHVCVRGPSCVECSAIAYR*SFASKF
Trigger: GAATTTAGAGGCAAATGACAAGCGATAGGCTATTGC...GCTGCACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCTCTGCATGTTTTTAATAAGGGAAGGGTTATGTGCGACAAGCTCGTCAAAGTTGCGAGGACGGCCTCGTaGAATATGGCGGCCACGTTT +
Preference number: 5 (lower is better)
Translates to: ALHVFNKGRVMCDKLVKVARTAS*NMAATF
Trigger: AAACGTGGCCGCCATATTCAACGAGGCCGTCCTCGC...AACTTTGACGAGCTTGTCGCACATAACCCTTCCCTTATTAAAAACATGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS TCA 90 bp CAGCCCAGGAAGAGCCTACTGAGCTCCCTCATGCAGCTTCGTGGATaGCGAGAACTCCTGCAAATATGTGTGGCCTATTTATTACTCATA +
Preference number: 5 (lower is better)
Translates to: QPRKSLLSSLMQLRG*RELLQICVAYLLLI
Trigger: TATGAGTAATAAATAGGCCACACATATTTGCAGGAGTTCTCGTCATCCACGAAGCTGCATGAGGGAGCTCAGTAGGCTCTTCCTGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS GCA 90 bp CGTGGTCAGATCCAAACTGCTGTGATTGTTGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCACTTCTTTCCAGAGCTGCTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: RGQIQTAVIVACGFF*SMSTCHFFPELLQF
Trigger: GAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 39 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS GCA 90 bp AGCAATGTCCCCTGCCCATATAGGGGGAACAGAATTGGGTGTGAGTaGGTGCCACTAAGACCTCATGCTAGTACTCAAGCCTTAATGAAA +
Preference number: 5 (lower is better)
Translates to: SNVPCPYRGNRIGCE*VPLRPHASTQALMK
Trigger: TTTCATTAAGGCTTGAGTACTAGCATGAGGTCTTAGTGGCACGCACTCACACCCAATTCTGTTCCCCCTATATGGGCAGGGGACATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 90 bp GTGGCTTACATTTCCAAACAAACGCAGCTCAGCCTGGGGAAGCGATaGCATAAAAACAGGTTTGCATATACAGAGCTCAGTGGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: VAYISKQTQLSLGKR*HKNRFAYTELSGRS
Trigger: GCTTCTGCCACTGAGCTCTGTATATGCAAACCTGTTTTTATGCCATCGCTTCCCCAGGCTGAGCTGCGTTTGTTTGGAAATGTAAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS-3UTR CAA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTACAGAGGGAAGCCTTTaGGCTAGCAGGCATCACATC +
Preference number: 5 (lower is better)
Translates to: PMEAVVYRGILFSAIEACTEGSL*ASRHHI
Trigger: GATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTGT...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAACAGAGGGAAGCCTTTaGGCTAGCAGGCATCACATC +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESTEGSL*ASRHHI
Trigger: GATGTGATGCCTGCTAGCCAAAAGGCTTCCCTCTGT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGATCTGCTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: SRGSSLTCTGCTACIGDLLNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...CAGATCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTC +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKHSSKW*LPPDPF
Trigger: GAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TCGGGCGTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTTGTTTGTCATTCCTCTaGGGAGATTTTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: SGVLSVQRWQDCSSKSAACLSFL*GDFNPL
Trigger: TAGTGGATTAAAATCTCCCAAGAGGAATGACAAACA...AGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGACGCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCCCCGTTCAGCTCTTCCCGTATTGCGCTGGCTAAGTTGCCCAGAGTGGGATTTTGTTTGTCATTCCTCTaGGGAGATTTTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: APFSSSRIALAKLPRVGFCLSFL*GDFNPL
Trigger: TAGTGGATTAAAATCTCCCAAGAGGAATGACAAACA...AAATCCCACTCTGGGCAACTTAGCCAGCGCAATACGGGAAGAGCTGAACGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: PMEAVVYRGILFSAIEACGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCT +
Preference number: 5 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIAARAE*SEGLGA
Trigger: AGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGTCACTAAGGACAGGGGCCCTTCAGCTTCCTCTGGATCGAGGGGCTCTTCTTAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: LSLRTGALQLPLDRGALLSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...AAGAAGAGCCCCTCGATCCAGAGGAAGCTGAAGGGCCCCTGTCCTTAGTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCAAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRASACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGGACGAAATGGGCACGTaGTATTTGTCTGAGTACCGC +
Preference number: 5 (lower is better)
Translates to: IERCAVGVAALHVFNKGRDEMGT*YLSEYR
Trigger: GCGGTACTCAGACAAATACAACGTGCCCATTTCGTC...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTTACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTAAAGCTGCATCACTCTCGTTGCTGTaGGTATGCTCCATTGCCCCG +
Preference number: 5 (lower is better)
Translates to: AVVYRGILFSAIEACKAASLSLL*VCSIAP
Trigger: CGGGGCAATGGAGCATACCAACAGCAACGAGAGTGA...TGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTCCCAAATGGGGTTCTaGATGGCACTAAGAGTTAAC +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPSQMGF*MALRVN
Trigger: GTTAACTCTTAGTGCCATCAAGAACCCCATTTGGGA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGGTCTGCAGCTTAGGTGCACAAGCTCTGTCGGGCGTCCTCAGTGTCCAACGTTTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LVCSLGAQALSGVLSVQRFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...ACGTTGGACACTGAGGACGCCCGACAGAGCTTGTGCACCTAAGCTGCAGACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCAACTTCCTATCGCTTGTCATTaGCCTCTAAATTCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: NKTNPHPLSQSTQGPWQLPIACH*PLNSFA
Trigger: GGCAAAAGAATTTAGAGGCAAATGACAAGCGATAGG...AAGTTGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGGCAATAGCCTATCGCTaGTCATTTGCCTCTAAATTC +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVAIAYR*SFASKF
Trigger: GAATTTAGAGGCAAATGACAAGCGATAGGCTATTGC...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGCTGCCAGAGAAGTTTTaGTACCAAGCTTATGAGTGG +
Preference number: 5 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLLPEKF*YQAYEW
Trigger: CCACTCATAAGCTTGGTACAAAAACTTCTCTGGCAG...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATTCCTGACAGTGCATTaGTCTGACACACGGGACTAC +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSEFLTVH*SDTRDY
Trigger: GTAGTCCCGTGTGTCAGACAAATGCACTGTCAGGAA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTATGTGCGACAAGCTCGTCAAAGTTTTCATCGGGGCAGTATTTGCGAGGACGCACCCCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: VMCDKLVKVFIGAVFARTHPTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGGGTG...CGTCCTCGCAAATACTGCCCCGATGAAAACTTTGACGAGCTTGTCGCACATAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS TCA 90 bp AAAGGACCCAAACTCATCCTCTACTCTGATAAAGCACTTATGCAGTaGGAGGTTGGTGCGAATGGCACCCCACTGATCTTTTGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: KGPKLILYSDKALMQ*EVGANGTPLIFCGL
Trigger: AAGGCCACAAAAGATCAGTGGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGGGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS TCA 90 bp GTCACCAATGAAACAAGACCACAGACCAGGACCCAGTGGACTCCCTaGGTGTTGAGGGACTTTGGTAAGGAAATAGTACTAAACCCACTT +
Preference number: 5 (lower is better)
Translates to: VTNETRPQTRTQWTP*VLRDFGKEIVLNPL
Trigger: AAGTGGGTTTAGTACTATTTCCTTACCAAAGTCCCTCAACACTCAGGGAGTCCACTGGGTCCTGGTCTGTGGTCTTGTTTCATTGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647741.1
ENST00000649081.1
CDS TCA 90 bp GAACACATCGTCCCGTATTCCAGGGATATGCCCTGGATCTGGCTTTaGCTGGCTGTCCTTTACATTTTCTTTCTCCACCATCAACCAAAC +
Preference number: 5 (lower is better)
Translates to: EHIVPYSRDMPWIWL*LAVLYIFFLHHQPN
Trigger: GTTTGGTTGATGGTGGAGAAAGAAAATGTAAAGGACAGCCAGTCAAAGCCAGATCCAGGGCATATCCCTGGAATACGGGACGATGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS GCA 90 bp AGGAGGAGACACATGTCGTGGTCAGATCCAAACTGCTGTGATTGTTaGCTGTGGTTTCTTCTGCAGTATGAGCACTTGTCACTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: RRRHMSWSDPNCCDC*LWFLLQYEHLSLLS
Trigger: GGAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 39 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS GCA 90 bp CTGCTATCCTGTATCCACAGGAGGCATCCAAGGAGTTTCTGCGAATaGATCCATTACCCTAAGTTTTATGACTACTCGTCACAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LLSCIHRRHPRSFCE*IHYPKFYDYSSQAS
Trigger: ACTGGCCTGTGACGAGTAGTCATAAAACTTAGGGTAATGGATGCATTCGCAGAAACTCCTTGGATGCCTCCTGTGGATACAGGATAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 90 bp AGTTGCTTAAGTAATGGTGCAGAAGTCCATAAGCACCCTCGCTCCTaGAACATTAACCACTCTGAGATCCTCAGGGGAAAGGCAGTCTAT +
Preference number: 5 (lower is better)
Translates to: SCLSNGAEVHKHPRS*NINHSEILRGKAVY
Trigger: ATAGACTGCCTTTCCCCTGAGGATCTCAGAGTGGTTAATGTTCCAGGAGCGAGGGTGCTTATGGACTTCTGCACCATTACTTAAGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CCA 90 bp AGCAACCCAGGAACCACATCTAGCAGGAGTAACACAGAGGATGCGTaGGCACCGTTTCTTCCTCTATGTAGATGGTATGTTTACCATGAA +
Preference number: 5 (lower is better)
Translates to: SNPGTTSSRSNTEDA*APFLPLCRWYVYHE
Trigger: TTCATGGTAAACATACCATCTACATAGAGGAAGAAACGGTGCCCACGCATCCTCTGTGTTACTCCTGCTAGATGTGGTTCCTGGGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS CCA 90 bp CTGCAGGATTACTATATCGACCACTGGGTCCCCCGCAAAGGTAGATaGCAATTTTTAGGTGGTATACAGCATCAGTGGTGTCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: LQDYYIDHWVPRKGR*QFLGGIQHQWCLSL
Trigger: AAGTGACAGACACCACTGATGCTGTATACCACCTAAAAATTGCCATCTACCTTTGCGGGGGACCCAGTGGTCGATATAGTAATCCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 90 bp TTCCTGTTTCTCGCAGATAAATGGTTTGCTCAAGGTCAGACGGAGTaGTACCCAGCGAGGTGTCAGGTTTACAGGTCAAATGTCCGTTTT +
Preference number: 5 (lower is better)
Translates to: FLFLADKWFAQGQTE*YPARCQVYRSNVRF
Trigger: AAAACGGACATTTGACCTGTAAACCTGACACCTCGCTGGGTACCACTCCGTCTGACCTTGAGCAAACCATTTATCTGCGAGAAACAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS-3UTR CAA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGCTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLLNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGAAGAAGGAGCTGTCTaGCCACCTGAAGTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLEEGAV*PPEVPV
Trigger: AACAGGCACTTCAGGTGGCAAGACAGCTCCTTCTTC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATGTTTGTCATTCCTCTaGGGAGATTTTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMACLSFL*GDFNPL
Trigger: TAGTGGATTAAAATCTCCCAAGAGGAATGACAAACA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGCCTGGCTTGAAGCTGCTGCTGTaGAAGCATGAGGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LRCFRNDWKSSHTASQPGLKLLL*KHEGLL
Trigger: CAGCAGGCCCTCATGCTTCAACAGCAGCAGCTTCAA...GCCAGGCTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CAA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TGCATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGACTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: CIERCAVGVAALHVFNKGLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...TCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTGTAGAGTGAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: SLSGRTSRLCERAFMCRVSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...CACTCTACACATGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TGGATCGAGGGGCTCTTCTTTGACGTGTACAGGATGCACGGCTTGCATAGGAGAAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: WIEGLFFDVYRMHGLHRRSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...TCTCCTATGCAAGCCGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCACATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 5 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGCCTCCGATGCGGACTaGGAGAGAGTGACACTTGAT +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGASDAD*ERVTLD
Trigger: ATCAAGTGTCACTCTCTCCAAGTCCGCATCGGAGGC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACTACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATACAGGATGCACGGCTaGCATAGGAGATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKYRMHG*HRRSAW
Trigger: CCAGGCAGATCTCCTATGCAAGCCGTGCATCCTGTA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TGCAAACAAAACCAACCCACACCCGTTATCGCAGAGCACCCAAGGCCCATGGCATTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: CKQNQPTPVIAEHPRPMAFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...TGCCATGGGCCTTGGGTGCTCTGCGATAACGGGTGTGGGTTGGTTTTGTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCTGAACTAATGTATAAACTCAGCGCCGCCGCCGCCACCCCTACTTTCAGGGCATTTACAACACTGATGTaGACGGTTAAGAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SELMYKLSAAAATPTFRAFTTLM*TVKRGK
Trigger: TTTTCCTCTCTTAACCGTCAACATCAGTGTTGTAAA...TGCCCTGAAAGTAGGGGTGGCGGCGGCGGCGCTGAGTTTATACATTAGTTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTTGGAATGAATCGGCATaGTTCCTAGAGTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPWNESA*FLEFVS
Trigger: AGAGACAAACTCTAGGAACAATGCCGATTCATTCCA...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTGTGGAATGAATCGGCATaGTTCCTAGAGTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: KVQKTLSLQEAIGPNGGLWNESA*FLEFVS
Trigger: AGAGACAAACTCTAGGAACAATGCCGATTCATTCCA...CAGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGGAATGAATCGGCATaGTTCCTAGAGTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSWNESA*FLEFVS
Trigger: AGAGACAAACTCTAGGAACAATGCCGATTCATTCCA...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAGCAATAGCCTATCGCTaGTCATTTGCCTCTAAATTC +
Preference number: 5 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSAIAYR*SFASKF
Trigger: GAATTTAGAGGCAAATGACAAGCGATAGGCTATTGC...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGACCTGTAACGCAATAGCCTATCGCTaGTCATTTGCCTCTAAATTC +
Preference number: 5 (lower is better)
Translates to: AELKCGGVLRTEVVLTCNAIAYR*SFASKF
Trigger: GAATTTAGAGGCAAATGACAAGCGATAGGCTATTGC...GTTACAGGTCAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCTGGTCCAAGGGGCAGCCTAACTCATCTTACAAGACGGACTCTAGGGACAGGTAAACTGTCTCCTTTATaGGATACTCTAATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: AGPRGSLTHLTRRTLGTGKLSPL*DTLIAV
Trigger: CACTGCAATTAGAGTATCCAATAAAGGAGACAGTTT...ACCTGTCCCTAGAGTCCGTCTTGTAAGATGAGTTAGGCTGCCCCTTGGACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS TCA 90 bp GCCAGTGAGCTGACACTGAGACTCAGGAGCAGTAGTGGGTCTCTGTaGATAGAAACTGAATCAGAGGTGGAGAGAAACAAATACCTGATT +
Preference number: 5 (lower is better)
Translates to: ASELTLRLRSSSGSL*IETESEVERNKYLI
Trigger: AATCAGGTATTTGTTTCTCTCCACCTCTGATTCAGTTTCTATTCACAGAGACCCACTACTGCTCCTGAGTCTCAGTGTCAGCTCACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647741.1
CDS TCA 90 bp GGGAGAGAAGTCCTTAGCAATACCAGTGAAGCTGAGTATTTTAGGTaGCACCAGTTGGGATACGCTGGTGTAGATCTGAAGAAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: GREVLSNTSEAEYFR*HQLGYAGVDLKKCP
Trigger: TGGACACTTCTTCAGATCTACACCAGCGTATCCCAACTGGTGTCACCTAAAATACTCAGCTTCACTGGTATTGCTAAGGACTTCTCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS TCA 90 bp AGATGGTATGTTTACCATGAACCGAAACACACGGTGAGTCCTGCGTaGATTCACTTAGGATGCAGTGTAAGATATCTCTGGCAGCGGTCT +
Preference number: 5 (lower is better)
Translates to: RWYVYHEPKHTVSPA*IHLGCSVRYLWQRS
Trigger: AGACCGCTGCCAGAGATATCTTACACTGCATCCTAAGTGAATTCACGCAGGACTCACCGTGTGTTTCGGTTCATGGTAAACATACCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS TCA 90 bp GAGATAGATCGCTGGAGATACATCTCTGCAAATATCGGCTGTGGCTaGAGACCTAACGGCATGAGGTTTGTGCAAGTAATATGGCAACCT +
Preference number: 5 (lower is better)
Translates to: EIDRWRYISANIGCG*RPNGMRFVQVIWQP
Trigger: AGGTTGCCATATTACTTGCACAAACCTCATGCCGTTAGGTCTTCAGCCACAGCCGATATTTGCAGAGATGTATCTCCAGCGATCTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648155.1
CDS TCA 90 bp TGCTTGGGCACCAATCATTCTGCCTTTAAAGAAGAGCTGGGTGCTTaGGTCTTATGGGCAAGGACCATATCTGAATCATCCTGTATCTCC +
Preference number: 5 (lower is better)
Translates to: CLGTNHSAFKEELGA*VLWARTISESSCIS
Trigger: GGAGATACAGGATGATTCAGATATGGTCCTTGCCCATAAGACTCAAGCACCCAGCTCTTCTTTAAAGGCAGAATGATTGGTGCCCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS TCA 90 bp TTTCCACTGTATCACCTGGGGTGCCTAGTACAATGCTGGCATTTATaGTGTACCAGGATCCGTGCTAAGCTCTTTACAAGCATCACCTCT +
Preference number: 5 (lower is better)
Translates to: FPLYHLGCLVQCWHL*CTRIRAKLFTSITS
Trigger: AGAGGTGATGCTTGTAAAGAGCTTAGCACGGATCCTGGTACATCATAAATGCCAGCATTGTACTAGGCACCCCAGGTGATACAGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS GCA 90 bp GCAAGGCTAATATATTTTGAAATGAGTAGGGGAGACCTGTGCCTCTaGTGCATATTCGGGACGGCCGTTAATCTTACCTGTAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: ARLIYFEMSRGDLCL*CIFGTAVNLTCKAA
Trigger: TGCAGCTTTACAGGTAAGATTAACGGCCGTCCCGAATATGCAGCAGAGGCACAGGTCTCCCCTACTCATTTCAAAATATATTAGCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS GCA 90 bp TCTTTTTCCTACACACCACTGTCTCTCAGCTTACCCGAGCTGAAATaGCTCTTTGCTTTGCTGTCATGGTTTAGCTGTCTTCTCTGCGTT +
Preference number: 5 (lower is better)
Translates to: SFSYTPLSLSLPELK*LFALLSWFSCLLCV
Trigger: AACGCAGAGAAGACAGCTAAACCATGACAGCAAAGCAAAGAGGCATTTCAGCTCGGGTAAGCTGAGAGACAGTGGTGTGTAGGAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS GCA 90 bp CTCCACCATCAACCAAACTACCTGTTTATCTCCAGATGCCTAGCTTaGCTAATGGAACACTCCTTAACCCGCCCCAAAATGATTGTCACA +
Preference number: 5 (lower is better)
Translates to: LHHQPNYLFISRCLA*LMEHSLTRPKMIVT
Trigger: TGTGACAATCATTTTGGGGCGGGTTAAGGAGTGTTCCATTAGGCAAGCTAGGCATCTGGAGATAAACAGGTAGTTTGGTTGATGGTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS GCA 90 bp ACCATGCTGCTATCCTGTATCCACAGGAGGCATCCAAGGAGTTTCTaGGAATGCATCCATTACCCTAAGTTTTATGACTACTCGTCACAG +
Preference number: 5 (lower is better)
Translates to: TMLLSCIHRRHPRSF*ECIHYPKFYDYSSQ
Trigger: CTGTGACGAGTAGTCATAAAACTTAGGGTAATGGATGCATTCGCAGAAACTCCTTGGATGCCTCCTGTGGATACAGGATAGCAGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 90 bp AGACACATGTCGTGGTCAGATCCAAACTGCTGTGATTGTTGCCTGTaGTTTCTTCTGCAGTATGAGCACTTGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RHMSWSDPNCCDCCL*FLLQYEHLSLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 39 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS CCA 90 bp CAGTACCTTGCTTGGGCACCAATCATTCTGCCTTTAAAGAAGAGCTaGGTGCTTGAGTCTTATGGGCAAGGACCATATCTGAATCATCCT +
Preference number: 5 (lower is better)
Translates to: QYLAWAPIILPLKKS*VLESYGQGPYLNHP
Trigger: AGGATGATTCAGATATGGTCCTTGCCCATAAGACTCAAGCACCCAGCTCTTCTTTAAAGGCAGAATGATTGGTGCCCAAGCAAGGTACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAACTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSELSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCLSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAAACCTGAAGAGCTGGTaGTTTGTCATTCCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESNLKSW*FVIPLG
Trigger: CCCAAGAGGAATGACAAACAACCAGCTCTTCAGGTT...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGGTAGCCACCTGCTGTaGCTCTTTAGGCTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKGSHLL*LFRLFS
Trigger: GGAAAACAGCCTAAAGAGCAACAGCAGGTGGCTACC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGNCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCAAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GACAGGAAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTAAACTGTCTCCTTTATaGGATACTCTAATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: DRKVGAELKCGGVLRTEVKLSPL*DTLIAV
Trigger: CACTGCAATTAGAGTATCCAATAAAGGAGACAGTTT...AACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCTCTTCTTTGTGCCTTaGGAAACGGAGTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLLFFVP*ETEFSW
Trigger: CCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGAG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS TCA 90 bp GCAACAAATCACAGAAAGGTAGGATGGAGAGTTCTGTCCCGTCCTTaGGTCTACATAAGAACAGAGGGACAATGCAAAGCTGTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: ATNHRKVGWRVLSRP*VYIRTEGQCKAVSN
Trigger: ATTGCTGACAGCTTTGCATTGTCCCTCTGTTCTTATGTAGACTCAAGGACGGGACAGAACTCTCCATCCTACCTTTCTGTGATTTGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS GCA 90 bp AGGCTAATATATTTTGAAATGAGTAGGGGAGACCTGTGCCTCTGCTaGATATTCGGGACGGCCGTTAATCTTACCTGTAAAGCTGCATTG +
Preference number: 5 (lower is better)
Translates to: RLIYFEMSRGDLCLC*IFGTAVNLTCKAAL
Trigger: CAATGCAGCTTTACAGGTAAGATTAACGGCCGTCCCGAATATGCAGCAGAGGCACAGGTCTCCCCTACTCATTTCAAAATATATTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CCA 90 bp AAGAAAAGGCAGTGGCTTACATTTCCAAACAAACGCAGCTCAGCCTaGGGAAGCGATGGCATAAAAACAGGTTTGCATATACAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KKRQWLTFPNKRSSA*GSDGIKTGLHIQSS
Trigger: TGAGCTCTGTATATGCAAACCTGTTTTTATGCCATCGCTTCCCCAGGCTGAGCTGCGTTTGTTTGGAAATGTAAGCCACTGCCTTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS-3UTR CAA 90 bp CCCATGGAAGCGGTAGTGTATAGAGGTATACTATTCTCAGCCATTGAAGCCTGTCTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: PMEAVVYRGILFSAIEACLSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...ACAGGCTTCAATGGCTGAGAATAGTATACCTCTATACACTACCGCTTCCATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp CTGTCATTCATTCTCTTTCTGGCAGGACGTCACGTCTGTGTGAGAGGGCCTTCATGTTTGTCATTCCTCTaGGGAGATTTTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: LSFILFLAGRHVCVRGPSCLSFL*GDFNPL
Trigger: TAGTGGATTAAAATCTCCCAAGAGGAATGACAAACA...TGAAGGCCCTCTCACACAGACGTGACGTCCTGCCAGAAAGAGAATGAATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCTGGGGAGTGATAACTaGAGGTGTCATCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLGSDN*RCHHSH
Trigger: GTGGCTATGATGACACCTCAAGTTATCACTCCCCAG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: VLSVQRWQDCSSKSAAKSSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...ACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp ATTGAGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGTTTTTAATAAGGGAAGGCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: IERCAVGVAALHVFNKGRHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...CCTTCCCTTATTAAAAACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGCTTGCAGGCGTTCTTaGTCTTTTGCAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKACRRS*SFASCS
Trigger: GCTACAGCTTGCAAAAGACAAAGAACGCCTGCAAGC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
ENST00000650402.1
CDS-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIMGTLY*SEYRLR
Trigger: CCGCAGGCGGTACTCAGACAAATACAACGTGCCCAT...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp GCCCCGATAGTCACTCCATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: APIVTPCPRLLVHLRNLCVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...ACAGAGATTACGAAGATGAACCAGTAAACGAGGACATGGAGTGACTATCGGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCTCGAGGGGCTCTTCTTaGACGTGTACAGGATGCACG +
Preference number: 5 (lower is better)
Translates to: RWDSLPSVAPLILCPIFISRGSS*TCTGCT
Trigger: CGTGCATCCTGTACACGTCAAAGAAGAGCCCCTCGA...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CAAGGTACAGAAAACTTTAAGCCTCCAAGAGGCCATCGGCCCAAATGGAGGCCTAAACTGTCTCCTTTATaGGATACTCTAATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: QGTENFKPPRGHRPKWRPKLSPL*DTLIAV
Trigger: CACTGCAATTAGAGTATCCAATAAAGGAGACAGTTT...AGGCCTCCATTTGGGCCGATGGCCTCTTGGAGGCTTAAAGTTTTCTGTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AAAGTGGGTGCAGAGCTGAAGTGTGGAGGGGTTCTAAGGACTGAGGTTGTACTGTCTTCACTTTCAAAGTaGAAAGATCAGTTGGAGCTT +
Preference number: 5 (lower is better)
Translates to: KVGAELKCGGVLRTEVVLSSLSK*KDQLEL
Trigger: AAGCTCCAACTGATCTTTCAACTTTGAAAGTGAAGA...CAGTACAACCTCAGTCCTTAGAACCCCTCCACACTTCAGCTCTGCACCCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS TCA 90 bp TCAGGGAGGTTTGCCTCCACAGTAGCTGGCTGGGCTCTCACTAAATaGCAAAGAAACCACAAGAATTCCTCAAGTAATTCTTCACTTTCA +
Preference number: 5 (lower is better)
Translates to: SGRFASTVAGWALTK*QRNHKNSSSNSSLS
Trigger: TGAAAGTGAAGAATTACTTGAGGAATTCTTGTGGTTTCTTTGTCATTTAGTGAGAGCCCAGCCAGCTACTGTGGAGGCAAACCTCCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491238.7
ENST00000648748.2
ENST00000649695.2
ENST00000674446.1
CDS GCA 90 bp TCTCAGAACCAATCTAGGGGTGATACAGCCCCCATTGAGAATGTATaGTGCAGAGGACTGCAATGGTATTGGATGACAAATGTCAGATTT +
Preference number: 5 (lower is better)
Translates to: SQNQSRGDTAPIENV*CRGLQWYWMTNVRF
Trigger: AAATCTGACATTTGTCATCCAATACCATTGCAGTCCTCTGCAGCATACATTCTCAATGGGGGCTGTATCACCCCTAGATTGGTTCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CCA 90 bp TCTCTCAGCTTACCCGAGCTGAAATGCCTCTTTGCTTTGCTGTCATaGTTTAGCTGTCTTCTCTGCGTTCCTACCATTCAGAAAGATTTT +
Preference number: 5 (lower is better)
Translates to: SLSLPELKCLFALLS*FSCLLCVPTIQKDF
Trigger: AAAATCTTTCTGAATGGTAGGAACGCAGAGAAGACAGCTAAACCATGACAGCAAAGCAAAGAGGCATTTCAGCTCGGGTAAGCTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS CCA 90 bp TGTCCTTTCCATCCCCACCCTTTAATGCTGTCATTATGTATAATGTaGCACACACTGTTATCACCCAAAGAAAAGCCTTCCAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: CPFHPHPLMLSLCIM*HTLLSPKEKPSREK
Trigger: CTTCTCCCTGGAAGGCTTTTCTTTGGGTGATAACAGTGTGTGCCACATTATACATAATGACAGCATTAAAGGGTGGGGATGGAAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS CCA 90 bp TTATGGGATAAAAAGTGGCTCACAAGAATCATGTACAGGCCAATTTaGGACAGAAAATTTGGACAGGAGTGGCTTACTTGTCCCGTGCAC +
Preference number: 5 (lower is better)
Translates to: LWDKKWLTRIMYRPI*DRKFGQEWLTCPVH
Trigger: GTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTACATGATTCTTGTGAGCCACTTTTTATCCCATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGCTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLLSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCACATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp AGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCATACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: SVQRWQDCSSKSAAKSESYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...TGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TCCTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAAACTGTCTCCTTTATaGGATACTCTAATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SSVSNVGRTAVQSLLLKVKLSPL*DTLIAV
Trigger: CACTGCAATTAGAGTATCCAATAAAGGAGACAGTTT...CACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS GCA 90 bp ATTAGAGCAAGGCTAATATATTTTGAAATGAGTAGGGGAGACCTGTaGCTCTGCTGCATATTCGGGACGGCCGTTAATCTTACCTGTAAA +
Preference number: 5 (lower is better)
Translates to: IRARLIYFEMSRGDL*LCCIFGTAVNLTCK
Trigger: TTTACAGGTAAGATTAACGGCCGTCCCGAATATGCAGCAGAGGCACAGGTCTCCCCTACTCATTTCAAAATATATTAGCCTTGCTCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS GCA 90 bp CTGCAATGGTATTGGATGACAAATGTCAGATTTATCTATAGAATATaGTTCTCGAACAGTCTGGGTAGGGGCAAAAACAGGACCACTGGC +
Preference number: 5 (lower is better)
Translates to: LQWYWMTNVRFIYRI*FSNSLGRGKNRTTG
Trigger: GCCAGTGGTCCTGTTTTTGCCCCTACCCAGACTGTTCGAGAAGCATATTCTATAGATAAATCTGACATTTGTCATCCAATACCATTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS GCA 90 bp GCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTaGAGGCGTTCTTTGTCTTTTGCAAGTTTAGAAATGATTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ALGSVDFTCRWVIMA*RRSLSFASLEMIGN
Trigger: ATTTCCAATCATTTCTAAACTTGCAAAAGACAAAGAACGCCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648321.1
ENST00000648384.1
ENST00000649417.1
CDS GCA 90 bp CCTTCGCTTGCACAACAAAGATTAGCATCTGCAATGGTCCATTTCTaGATAAGTGAACATATAGCCTTGCTGCTTGATCGAATAGTCCAG +
Preference number: 5 (lower is better)
Translates to: PSLAQQRLASAMVHF*ISEHIALLLDRIVQ
Trigger: CTGGACTATTCGATCAAGCAGCAAGGCTATATGTTCACTTATGCAGAAATGGACCATTGCAGATGCTAATCTTTGTTGTGCAAGCGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650073.1
ENST00000650231.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp CTCAGTGTCCAACGTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATGTTTGTCATTCCTCTaGGGAGATTTTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: LSVQRWQDCSSKSAAKSECLSFL*GDFNPL
Trigger: TAGTGGATTAAAATCTCCCAAGAGGAATGACAAACA...TTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAACGTTGGACACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAAATTGTCAGAAGGCCTaGGCGCTGCAAAGACAGGAG +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSNCQKA*ALQRQE
Trigger: CTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGCTGCTGCAGTTCTGTaGGAATCATGCCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIAAAVL*ESCLEQ
Trigger: TTGCTCAAGGCATGATTCCAACAGAACTGCAGCAGC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCAACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTC +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSTESCP*VEACGF
Trigger: GAACCCACATGCCTCTACCAATGGACAGCTCTCAGT...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGCTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327590.9
ENST00000650402.1
CDS-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIVGHHG*QAFFVF
Trigger: AAAGACAAAGAACGCCTGCAAGCCATGATGACCCAC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGTACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS TCA 90 bp TTGGTAGACTGCCCTAGTTTCCATTATTCTATAACCATCCTAAGTTaGGACATCAAAAACTGGCAGCATCTCTTAGCCAGTGAGCTGACA +
Preference number: 5 (lower is better)
Translates to: LVDCPSFHYSITILS*DIKNWQHLLASELT
Trigger: TGTCAGCTCACTGGCTAAGAGATGCTGCCAGTTTTTGATGTCTCAACTTAGGATGGTTATAGAATAATGGAAACTAGGGCAGTCTACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647741.1
CDS TCA 90 bp TTGCTAGCCCAGGGAAGCATATTTGCTGAGCCTGTCTCTCTGTTTTaGCATGCAAGACTTGTGAAATTTAAACATACTTGTAGGCATCCA +
Preference number: 5 (lower is better)
Translates to: LLAQGSIFAEPVSLF*HARLVKFKHTCRHP
Trigger: TGGATGCCTACAAGTATGTTTAAATTTCACAAGTCTTGCATGTCAAAACAGAGAGACAGGCTCAGCAAATATGCTTCCCTGGGCTAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS GCA 90 bp AATTTAGTTTCGTTGCAGAAAGCTGTGGCACTGCTATTGGTGAAATaGAAAACTACATGGGATGAGTCAACCATGCAAAGCCAAAGCAAC +
Preference number: 5 (lower is better)
Translates to: NLVSLQKAVALLLVK*KTTWDESTMQSQSN
Trigger: GTTGCTTTGGCTTTGCATGGTTGACTCATCCCATGTAGTTTTGCATTTCACCAATAGCAGTGCCACAGCTTTCTGCAACGAAACTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644199.1
CDS GCA 90 bp TCACATGTATTTTTAAAGAACACATCGTCCCGTATTCCAGGGATATaGCCTGGATCTGGCTTTGACTGGCTGTCCTTTACATTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: SHVFLKNTSSRIPGI*PGSGFDWLSFTFSF
Trigger: GAAAGAAAATGTAAAGGACAGCCAGTCAAAGCCAGATCCAGGGCATATCCCTGGAATACGGGACGATGTGTTCTTTAAAAATACATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS CCA 90 bp CAGTTTACGGATGATTCAGGCCACATGCTGAGTATGCCTGTCTTGTaGTCCTTTTACTATTTATTAGACTTTCCAACAGGGAAAAGGCTA +
Preference number: 5 (lower is better)
Translates to: QFTDDSGHMLSMPVL*SFYYLLDFPTGKRL
Trigger: TAGCCTTTTCCCTGTTGGAAAGTCTAATAAATAGTAAAAGGACCACAAGACAGGCATACTCAGCATGTGGCCTGAATCATCCGTAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGLNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp TTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTTGGCTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: LLVHLRNLCHGQNLDCGWLNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...CCAACCACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAACTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKLNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
CDS-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCCTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RWDSLPSVAPLILCPIFILQYEH*SLLSRA
Trigger: AGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAG...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp TTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGCCTGGCCATTTGTACTCTACATaGGGCTGTACTTCTATCGTC +
Preference number: 5 (lower is better)
Translates to: LRCFRNDWKSSHTASQPGHLYST*GCTSIV
Trigger: GACGATAGAAGTACAGCCCAATGTAGAGTACAAATG...GCCAGGCTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAAGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CATGTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: HVLVYWFIFVISVMVKIWVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...CCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGGTTACCACTGATCTTTaGTGGCCTTCGTTTTTGGAA +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGVTTDL*WPSFLE
Trigger: TTCCAAAAACGAAGGCCACAAAAGATCAGTGGTAAC...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp GTTGGCAGGACTGCAGTTCAAAGTCTGCTGCTAAAAGTGAATCAGTTTAGCAAATACTATTCTCAGCCATaGAAGCCTGTAAAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: VGRTAVQSLLLKVNQFSKYYSQP*KPVKLH
Trigger: ATGCAGCTTTACAGGCTTCAATGGCTGAGAATAGTA...TTTGCTAAACTGATTCACTTTTAGCAGCAGACTTTGAACTGCAGTCCTGCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000649596.1
ENST00000674446.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACTGCTGTCACTCTCGTaGCTGTTGGTATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSLLSLS*LLVCSI
Trigger: AATGGAGCATACCAACAGCAACGAGAGTGACAGCAG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGTGGAATGAATCGGCATaGTTCCTAGAGTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGWNESA*FLEFVS
Trigger: AGAGACAAACTCTAGGAACAATGCCGATTCATTCCA...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000493089.7
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGCCTATCGCTTGTCATTaGCCTCTAAATTCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGPIACH*PLNSFA
Trigger: GGCAAAAGAATTTAGAGGCAAATGACAAGCGATAGG...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACTCTTCTTTGTGCCTTaGGAAACGGAGTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSLFFVP*ETEFSW
Trigger: CCAGCTGAACTCCGTTTCCAAAGGCACAAAGAAGAG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGTGACCAGTGTCACTTaGAACACTGTAATACAACAG +
Preference number: 5 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVVTSVT*NTVIQQ
Trigger: CTGTTGTATTACAGTGTTCAAAGTGACACTGGTCAC...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS-3UTR CAA 90 bp CTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTGTGGCTTGCAGGCGTTCTTaGTCTTTTGCAAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: LVYWFIFVISVMVKIWTVACRRS*SFASLE
Trigger: TTCTAAACTTGCAAAAGACAAAGAACGCCTGCAAGC...CACAGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648321.1
ENST00000648384.1
CDS TCA 90 bp CCCCCATTGAGAATGTATGCTGCAGAGGACTGCAATGGTATTGGATaGCAAATGTCAGATTTATCTATAGAATATGCTTCTCGAACAGTC +
Preference number: 5 (lower is better)
Translates to: PPLRMYAAEDCNGIG*QMSDLSIEYASRTV
Trigger: GACTGTTCGAGAAGCATATTCTATAGATAAATCTGACATTTGTCATCCAATACCATTGCAGTCCTCTGCAGCATACATTCTCAATGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS TCA 90 bp TGGCTGAACCGTTACTTTTTGTCTCAGTCCCAGATTCTTGCATCATaGCTCAAAAACCTTGATGACTTTCTGGTTCACAATCTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: WLNRYFLSQSQILAS*LKNLDDFLVHNLRV
Trigger: AACTCTGAGATTGTGAACCAGAAAGTCATCAAGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648107.1
CDS CCA 90 bp ACAGCCCCCATTGAGAATGTATGCTGCAGAGGACTGCAATGGTATTaGATGACAAATGTCAGATTTATCTATAGAATATGCTTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: TAPIENVCCRGLQWY*MTNVRFIYRICFSN
Trigger: GTTCGAGAAGCATATTCTATAGATAAATCTGACATTTGTCATCCAATACCATTGCAGTCCTCTGCAGCATACATTCTCAATGGGGGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CCA 90 bp GGTGATACAGCCCCCATTGAGAATGTATGCTGCAGAGGACTGCAATaGTATTGGATGACAAATGTCAGATTTATCTATAGAATATGCTTC +
Preference number: 5 (lower is better)
Translates to: GDTAPIENVCCRGLQ*YWMTNVRFIYRICF
Trigger: GAAGCATATTCTATAGATAAATCTGACATTTGTCATCCAATACCATTGCAGTCCTCTGCAGCATACATTCTCAATGGGGGCTGTATCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGTGTTTGTCATTCCTCTaGGGAGATTTTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLCLSFL*GDFNPL
Trigger: TAGTGGATTAAAATCTCCCAAGAGGAATGACAAACA...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp AGATGGGACTCCCTTCCTTCTGTAGCTCCTTTAATATTGTGTCCTATTTTTATCGGCGTTCTTTGTCTTTaGCAAGCTGTAGCTCTAACT +
Preference number: 5 (lower is better)
Translates to: RWDSLPSVAPLILCPIFIGVLCL*QAVALT
Trigger: AGTTAGAGCTACAGCTTGCAAAAGACAAAGAACGCC...GATAAAAATAGGACACAATATTAAAGGAGCTACAGAAGGAAGGGAGTCCCATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp CCAAAGCCCAGGGCCTACATGATATCTTCTATGAGTTTTTGTGATACTGGGTTGAAACTGTCTCCTTTATaGGATACTCTAATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PKPRAYMISSMSFCDTGLKLSPL*DTLIAV
Trigger: CACTGCAATTAGAGTATCCAATAAAGGAGACAGTTT...CAACCCAGTATCACAAAAACTCATAGAAGATATCATGTAGGCCCTGGGCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000318789.10
ENST00000475937.5
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS TCA 90 bp AATATAATTACTGAAATGCTAAGGCCAGTGAATCTGCCTCTAAACTaGAACTGGGTAAATGGCCTATCATCAATTCCCAGGAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: NIITEMLRPVNLPLN*NWVNGLSSIPRSLK
Trigger: CTTAAGGCTCCTGGGAATTGATGATAGGCCATTTACCCAGTTTCAGTTTAGAGGCAGATTCACTGGCCTTAGCATTTCAGTAATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CCA 90 bp ACAGAGTTTGTCCCTTCTTTCAAGATAAGAATCTCTCATCCTGGGTaGGCAACTGTCTTGAAGGACTTTTTGTCTTGTGAATTTTCAGAT +
Preference number: 5 (lower is better)
Translates to: TEFVPSFKIRISHPG*ATVLKDFLSCEFSD
Trigger: ATCTGAAAATTCACAAGACAAAAAGTCCTTCAAGACAGTTGCCCACCCAGGATGAGAGATTCTTATCTTGAAAGAAGGGACAAACTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647649.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACTCAGTCCCAGATTCTaGCATCATGACTCAAAAACC +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSLSPRF*HHDSKT
Trigger: GGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp GTCCTCGTTTACTGGTTCATCTTCGTAATCTCTGTCATGGTCAAAATCTGGACTTGTTTGTCATTCCTCTaGGGAGATTTTAATCCACTA +
Preference number: 5 (lower is better)
Translates to: VLVYWFIFVISVMVKIWTCLSFL*GDFNPL
Trigger: TAGTGGATTAAAATCTCCCAAGAGGAATGACAAACA...AGTCCAGATTTTGACCATGACAGAGATTACGAAGATGAACCAGTAAACGAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327590.9
ENST00000648321.1
ENST00000648384.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACTGTACAACCTGCATTaGTACTCTACATTGGGCTGT +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSLYNLH*YSTLGC
Trigger: ACAGCCCAATGTAGAGTACAAATGCAGGTTGTACAG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
ENST00000674446.1
CDS-3UTR CAA 90 bp TCAACATGCAGTACTGTGCAAATAGGTCGTCCATTGGAATCCTTAAATTCTGGGAAGATCAGTTGGAGCTaGCAGGTAATTTTCAAAGTT +
Preference number: 5 (lower is better)
Translates to: STCSTVQIGRPLESLNSGKISWS*QVIFKV
Trigger: AACTTTGAAAATTACCTGCAAGCTCCAACTGATCTT...CCCAGAATTTAAGGATTCCAATGGACGACCTATTTGCACAGTACTGCATGTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674446.1
CDS CCA 90 bp AAGGGCTATGGAAAATGTGGAGACATCAGGAACGGTTATGAACGTTaGCATGTGTCATTTTTCCAGACCGAAATTGATGCAAATATAAAA +
Preference number: 5 (lower is better)
Translates to: KGYGKCGDIRNGYER*HVSFFQTEIDANIK
Trigger: TTTTATATTTGCATCAATTTCGGTCTGGAAAAATGACACATGCCAACGTTCATAACCGTTCCTGATGTCTCCACATTTTCCATAGCCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647741.1
CDS CCA 90 bp ATGAAAATAGAGTTTCAGGGACAGAAGGAACAAGTCCCCTCTTCTTaGTTAATATTTAATTGGGTGCTAAAGATTTCTTGGAGAGGACCT +
Preference number: 5 (lower is better)
Translates to: MKIEFQGQKEQVPSS*LIFNWVLKISWRGP
Trigger: AGGTCCTCTCCAAGAAATCTTTAGCACCCAATTAAATATTAACCAAGAAGAGGGGACTTGTTCCTTCTGTCCCTGAAACTCTATTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649145.1
CDS CCA 90 bp TTAAAGTATGGAATTTGTAATGAATGTATTTTAGGATATTTCCTCTaGCCTCCAGAGACCACTGAGGACCTTTTGAAAGGGAAACAGACC +
Preference number: 5 (lower is better)
Translates to: LKYGICNECILGYFL*PPETTEDLLKGKQT
Trigger: GGTCTGTTTCCCTTTCAAAAGGTCCTCAGTGGTCTCTGGAGGCCAGAGGAAATATCCTAAAATACATTCATTACAAATTCCATACTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649439.1
CDS-3UTR CAA 90 bp CATCCAGAATTTCAGGAGGCTATGTCATTAACCAAAAGGTACCAAAAAGATTCACTGAACCGTTACTTTTaGTCTCAGTCCCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: HPEFQEAMSLTKRYQKDSLNRYF*SQSQIL
Trigger: AAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAG...TGAATCTTTTTGGTACCTTTTGGTTAATGACATAGCCTCCTGAAATTCTGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318789.10
ENST00000615603.4
ENST00000649528.3
CDS-3UTR CAA 90 bp TCACTGTTGAGATGTTTTAGAAATGATTGGAAATCTTCGCACACTGCTTCACAGAGCGCATGCTCACTGTaGAGATGTTTTAGAAATGAT +
Preference number: 5 (lower is better)
Translates to: SLLRCFRNDWKSSHTASQSACSL*RCFRND
Trigger: ATCATTTCTAAAACATCTCAACAGTGAGCATGCGCT...CTGTGAAGCAGTGTGCGAAGATTTCCAATCATTTCTAAAACATCTCAACAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648654.1
CDS TCA 90 bp CTATTCTCAGCCATTGAAGCCTGTCATCAACCAAGAGAAAATTTATaGAGACACAGGGTATGTAAGACAAGGAAACTACTAATTATGGGT +
Preference number: 5 (lower is better)
Translates to: LFSAIEACHQPRENL*RHRVCKTRKLLIMG
Trigger: ACCCATAATTAGTAGTTTCCTTGTCTTACATACCCTGTGTCTTCATAAATTTTCTCTTGGTTGATGACAGGCTTCAATGGCTGAGAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460805.5
CDS TCA 90 bp ATCCAAACTCGTAGAAGAGAGGGAAACAATCCACTTCTCAAATCATaGATTTGTATCAATTTATTCCCCTTGCCTCATTATGGACGGAAA +
Preference number: 5 (lower is better)
Translates to: IQTRRREGNNPLLKS*ICINLFPLPHYGRK
Trigger: TTTCCGTCCATAATGAGGCAAGGGGAATAAATTGATACAAATTCATGATTTGAGAAGTGGATTGTTTCCCTCTCTTCTACGAGTTTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614183.1
ENST00000644199.1
ENST00000649081.1
CDS TCA 90 bp AGAGAGATGGAAATAACACTGGTAGTTCACTTTACTGCAAGAACCTaGCACCAGAAATATTTATATTTACATTTATGCCATCTTGGGCAC +
Preference number: 5 (lower is better)
Translates to: REMEITLVVHFTART*HQKYLYLHLCHLGH
Trigger: GTGCCCAAGATGGCATAAATGTAAATATAAATATTTCTGGTGTCAGGTTCTTGCAGTAAAGTGAACTACCAGTGTTATTTCCATCTCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647776.1
CDS TCA 90 bp CATATTGCAAAAGGACCCTGGACACTGAAGCATATTTGCTCCAAATaGCCGACACTAAGATATAATCTAATAAAATTACTGGACTTAAGA +
Preference number: 5 (lower is better)
Translates to: HIAKGPWTLKHICSK*PTLRYNLIKLLDLR
Trigger: TCTTAAGTCCAGTAATTTTATTAGATTATATCTTAGTGTCGGTCATTTGGAGCAAATATGCTTCAGTGTCCAGGGTCCTTTTGCAATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS GCA 90 bp CAGTCAAAACAGATAAACCAATACTTTGCCATTACGCTGCATCATTaGATATTGATTAAAATCGCTGGTACTAACTATAGATTGTCAACG +
Preference number: 5 (lower is better)
Translates to: QSKQINQYFAITLHH*ILIKIAGTNYRLST
Trigger: CGTTGACAATCTATAGTTAGTACCAGCGATTTTAATCAATATGCAATGATGCAGCGTAATGGCAAAGTATTGGTTTATCTGTTTTGACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS GCA 72 bp GGACAGAGAGGGCAGCGGGCTCCGAGGACCCGCGAGTaGGCGTGGAGGGAAGAGAGGATGCGGCTCAGGGAA +
Preference number: 6 (lower is better)
Translates to: GQRGQRAPRTRE*AWREERMRLRE
Trigger: TTCCCTGAGCCGCATCCTCTCTTCCCTCCACGCGCACTCGCGGGTCCTCGGAGCCCGCTGCCCTCTCTGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648895.1
ENST00000649610.1
CDS CCA 72 bp CAGCTGCCCCGATGTCCACGGCCGGCGTCTCTCCGTTaGACCGCCCCTCCCGAAGACCGCCGCACTCTAGTA +
Preference number: 6 (lower is better)
Translates to: QLPRCPRPASLR*TAPPEDRRTLV
Trigger: TACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS CAA 72 bp TCAGCTGCCCCGATGTCCACGGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGACCGCCGCACTCTAGT +
Preference number: 6 (lower is better)
Translates to: SAAPMSTAGVSP*DRPSRRPPHSS
Trigger: ACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS CAA 90 bp TGGGCGAGGTCAGCTGCCCCGATGTCCACGGCCGGCGTCTCTCCGTaGGACCGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: WARSAAPMSTAGVSP*DRPSRRPPHSSKWL
Trigger: CAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGGAGAGACGCCGGCCGTGGACATCGGGGCAGCTGACCTCGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS GCA 72 bp ACACGGCCTGAGGATGGGCACATTCCTCGCTCCCGGTaGCTTATCGCTAGGCTCGCGCCACCCCGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: TRPEDGHIPRSR*LIARLAPPRLA
Trigger: AGCCAGCCGGGGTGGCGCGAGCCTAGCGATAAGGCACCGGGAGCGAGGAATGTGCCCATCCTCAGGCCGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000647649.1
ENST00000648192.1
ENST00000649328.1
ENST00000650068.1
CDS GCA 72 bp TACCGGCCTGAGGATGGGCACATTCCTCGCTCCCGGTaGCTTATCGCTAGGCTCGCGCCACCCCGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: YRPEDGHIPRSR*LIARLAPPRLA
Trigger: AGCCAGCCGGGGTGGCGCGAGCCTAGCGATAAGGCACCGGGAGCGAGGAATGTGCCCATCCTCAGGCCGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650231.1
CDS CAA 72 bp CGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTCTGGATGGCTGAACCG +
Preference number: 6 (lower is better)
Translates to: RPSRRPPHSSKW*LPPDPFWMAEP
Trigger: CGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 31 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000471386.3
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648783.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS GCA 72 bp GCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTGGTTaGTGCCGCCCGACCCATTCTGGATGGCTGAACCGT +
Preference number: 6 (lower is better)
Translates to: APPEDRRTLVSG*CRPTHSGWLNR
Trigger: ACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 31 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000471386.3
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648783.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS GCA 72 bp CGTGGAGGGAAGAGAGGATGCGGCTCAGGGAATCCCTaGAAGGATCCAGAGACCGGGAAATCGGCCCGAGCC +
Preference number: 6 (lower is better)
Translates to: RGGKRGCGSGNP*KDPETGKSARA
Trigger: GGCTCGGGCCGATTTCCCGGTCTCTGGATCCTTGCAGGGATTCCCTGAGCCGCATCCTCTCTTCCCTCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648895.1
ENST00000649610.1
CDS GCA 72 bp GGTCACTGGGAGGGGGCATGCATAATGCCACAGGACTaGAACACACAGAGGGAAGCCGCGGAGTCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: GHWEGACIMPQD*NTQREAAESGE
Trigger: CTCCCCGGACTCCGCGGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649133.1
CDS CCA 72 bp GACCGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTaGTTGCTGCCGCCCGACCCATTCTGGATGGCTGAA +
Preference number: 6 (lower is better)
Translates to: DRPSRRPPHSSK*LLPPDPFWMAE
Trigger: TTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS CAA 90 bp TTGCTGCTGCTGTTGCTGCTGAAGAAGGAGCTGTCTTGCCACCTGTaGCTGCTGCTGCTGGGCGTGGGCGAGGTCAGCTGCCCCGATGTC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLKKELSCHL*LLLLGVGEVSCPDV
Trigger: GACATCGGGGCAGCTGACCTCGCCCACGCCCAGCAGCAGCAGCAACAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649431.1
CDS TCA 72 bp AGGCCGAGGTGGGAGGATCACTTGCACTCACGAGTTTaGAGCCAGCCAGGGCAAGATGGCGAGACGCTGTCC +
Preference number: 6 (lower is better)
Translates to: RPRWEDHLHSRV*SQPGQDGETLS
Trigger: GGACAGCGTCTCGCCATCTTGCCCTGGCTGGCTTCAAACTCGTGAGTGCAAGTGATCCTCCCACCTCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS GCA 72 bp TTGCTGCTGCTGTTGCTGCTGAAGAAGGAGCTGTCTTaGCACCTGTTGCTGCTGCTGCTGGGCGTGGGCGAG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLKKELS*HLLLLLLGVGE
Trigger: CTCGCCCACGCCCAGCAGCAGCAGCAACAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649431.1
CDS CAA 72 bp GAGGTTGAAGGGGAAGGGCAGGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCTGCAAAGACAGGAGGT +
Preference number: 6 (lower is better)
Translates to: EVEGEGQAARAE*SEGLGAAKTGG
Trigger: ACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGCCCTTCCCCTTCAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 40 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000497553.3
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000647614.1
ENST00000647776.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS CAA 72 bp GAGGCCGAGGTGGGAGGATCACTTGCACTCACGAGTTaGAAGCCAGCCAGGGCAAGATGGCGAGACGCTGTC +
Preference number: 6 (lower is better)
Translates to: EAEVGGSLALTS*KPARARWRDAV
Trigger: GACAGCGTCTCGCCATCTTGCCCTGGCTGGCTTCAAACTCGTGAGTGCAAGTGATCCTCCCACCTCGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS CAA 72 bp CTTGCTGCTGCTGTTGCTGCTGAAGAAGGAGCTGTCTaGCCACCTGTTGCTGCTGCTGCTGGGCGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: LAAAVAAEEGAV*PPVAAAAGRGR
Trigger: TCGCCCACGCCCAGCAGCAGCAGCAACAGGTGGCAAGACAGCTCCTTCTTCAGCAGCAACAGCAGCAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649431.1
CDS CAA 90 bp CCGTTGGACCGCCCCTCCCGAAGACCGCCGCACTCTAGTAAGTGGTaGCTGCCGCCCGACCCATTCTGGATGGCTGAACCGTTACTTTTT +
Preference number: 6 (lower is better)
Translates to: PLDRPSRRPPHSSKW*LPPDPFWMAEPLLF
Trigger: AAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTGCGGCGGTCTTCGGGAGGGGCGGTCCAACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS CAA 90 bp CTTGAGCAAGAGGTTGAAGGGGAAGGGCAGGCTGCCCGGGCTGAATaGTCAGAAGGCCTTGGCGCTGCAAAGACAGGAGGTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: LEQEVEGEGQAARAE*SEGLGAAKTGGAAA
Trigger: AGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAATTCAGCCCGGGCAGCCTGCCCTTCCCCTTCAACCTCTTGCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 40 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000497553.3
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000647614.1
ENST00000647776.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS CCA 72 bp GTCTGCAAGCAGCGACACAGCACACGCAGTGCGCCCTaGCTAGACCAAGCCCTAGCCAAACACAGCTCATTC +
Preference number: 6 (lower is better)
Translates to: VCKQRHSTRSAP*LDQALAKHSSF
Trigger: GAATGAGCTGTGTTTGGCTAGGGCTTGGTCTAGCCAGGGCGCACTGCGTGTGCTGTGTCGCTGCTTGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648748.2
ENST00000649695.2
CDS TCA 72 bp GGGAGGAAGTCCAGTATTTCGAAGCACCTACCGGCCTaGGGATGGGCACATTCCTCGCTCCCGGTGCCTTAT +
Preference number: 6 (lower is better)
Translates to: GRKSSISKHLPA*GWAHSSLPVPY
Trigger: ATAAGGCACCGGGAGCGAGGAATGTGCCCATCCTCAGGCCGGTAGGTGCTTCGAAATACTGGACTTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650231.1
CDS GCA 72 bp GGTCACTGGGAGGGGGCATGCATAATGCCACAGGACTaGAACACACAGAGGGAAGCCTTTTGGCTAGCAGGC +
Preference number: 6 (lower is better)
Translates to: GHWEGACIMPQD*NTQREAFWLAG
Trigger: GCCTGCTAGCCAAAAGGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 20 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000471386.3
ENST00000475937.5
ENST00000493089.7
ENST00000498154.6
ENST00000615603.4
ENST00000648192.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648718.1
ENST00000648895.1
ENST00000649328.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000650068.1
ENST00000650295.1
CDS GCA 72 bp GGTCACTGGGAGGGGGCATGCATAATGCCACAGGACTaGAACACACAGAGGGAAGCTTGTCTGGTCGCTGGT +
Preference number: 6 (lower is better)
Translates to: GHWEGACIMPQD*NTQREACLVAG
Trigger: ACCAGCGACCAGACAAGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648944.1
CDS GCA 72 bp CTGACACACAGGTCCACTCATCTTCGTCTCAGCAACTaGTCCCCACAAGGGGACCTGCAGGACTTCCAACTC +
Preference number: 6 (lower is better)
Translates to: LTHRSTHLRLSN*SPQGDLQDFQL
Trigger: GAGTTGGAAGTCCTGCAGGTCCCCTTGTGGGGAGCAGTTGCTGAGACGAAGATGAGTGGACCTGTGTGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318779.7
ENST00000622151.4
ENST00000648107.1
ENST00000648662.1
CDS GCA 72 bp TTCTGGGACACTCTGGCTGTTAGCAGTGGCGACTCCTaGTGCACAGTGGCTCTGTGTCCTCCAAGTGTCATC +
Preference number: 6 (lower is better)
Translates to: FWDTLAVSSGDS*CTVALCPPSVI
Trigger: GATGACACTTGGAGGACACAGAGCCACTGTGCAGCAGGAGTCGCCACTGCTAACAGCCAGAGTGTCCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475937.5
CDS GCA 72 bp GTTCAGCTGGGAGTACCCCGTGGCAATTCCTCAGTCTaGTGCACGTCCAAACCCAAACCCCGCTCACTACTT +
Preference number: 6 (lower is better)
Translates to: VQLGVPRGNSSV*CTSKPKPRSLL
Trigger: AAGTAGTGAGCGGGGTTTGGGTTTGGACGTGCAGCAGACTGAGGAATTGCCACGGGGTACTCCCAGCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS CCA 72 bp GCTACATTCAGAGCCGGTTCAGCTGGGAGTACCCCGTaGCAATTCCTCAGTCTGCTGCACGTCCAAACCCAA +
Preference number: 6 (lower is better)
Translates to: ATFRAGSAGSTP*QFLSLLHVQTQ
Trigger: TTGGGTTTGGACGTGCAGCAGACTGAGGAATTGCCACGGGGTACTCCCAGCTGAACCGGCTCTGAATGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS GCA 72 bp GTCAGAAGGCCTTGGCGCTGCAAAGACAGGAGGTGCTaGTGCTGTAACTGCTGCATCTGTAAAAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VRRPWRCKDRRC*CCNCCICKSCC
Trigger: GCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 40 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000497553.3
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000647614.1
ENST00000647776.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS GCA 72 bp ACGACATGCCAGATGCTACTGGAAGCTGGGCATCACTaGCCTCAAGAAATTCCTCCAGGCTGCACCATCGCT +
Preference number: 6 (lower is better)
Translates to: TTCQMLLEAGHH*PQEIPPGCTIA
Trigger: AGCGATGGTGCAGCCTGGAGGAATTTCTTGAGGGCAGTGATGCCCAGCTTCCAGTAGCATCTGGCATGTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647741.1
ENST00000649081.1
CDS GCA 72 bp CAGCTGGGAGTACCCCGTGGCAATTCCTCAGTCTGCTaGACGTCCAAACCCAAACCCCGCTCACTACTTAAT +
Preference number: 6 (lower is better)
Translates to: QLGVPRGNSSVC*TSKPKPRSLLN
Trigger: ATTAAGTAGTGAGCGGGGTTTGGGTTTGGACGTGCAGCAGACTGAGGAATTGCCACGGGGTACTCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650402.1
CDS CCA 72 bp CTGTCTGCCTTTGGATTTCCGTCTTCTTGCTGTAGATaGGTTCTGGCTGTTTCTGCGAAGCGGGGGTTGCCG +
Preference number: 6 (lower is better)
Translates to: LSAFGFPSSCCR*VLAVSAKRGLP
Trigger: CGGCAACCCCCGCTTCGCAGAAACAGCCAGAACCCATCTACAGCAAGAAGACGGAAATCCAAAGGCAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000491238.7
ENST00000648748.2
ENST00000649659.1
ENST00000649695.2
ENST00000674446.1
CDS CCA 72 bp TTGCTAGAAGCTGGGCTGCCTCAGGTAGCTCCTTTTTaGGTGGTAATCTCGCTCCTGCTCAAAACCCGCGTC +
Preference number: 6 (lower is better)
Translates to: LLEAGLPQVAPF*VVISLLLKTRV
Trigger: GACGCGGGTTTTGAGCAGGAGCGAGATTACCACCCAAAAAGGAGCTACCTGAGGCAGCCCAGCTTCTAGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS TCA 72 bp TCGGGACGGCCGTTAATCTTACCTGTAAAGCTGCATTaGGAGGTGTGCAGTAGGCGTGGCTGCTCTGCATGT +
Preference number: 6 (lower is better)
Translates to: SGRPLILPVKLH*EVCSRRGCSAC
Trigger: ACATGCAGAGCAGCCACGCCTACTGCACACCTCTCAATGCAGCTTTACAGGTAAGATTAACGGCCGTCCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS TCA 72 bp GTAGCTACCATACTAGACAGCCCAGGAAGAGCCTACTaGGCTCCCTCATGCAGCTTCGTGGATGACGAGAAC +
Preference number: 6 (lower is better)
Translates to: VATILDSPGRAY*APSCSFVDDEN
Trigger: GTTCTCGTCATCCACGAAGCTGCATGAGGGAGCTCAGTAGGCTCTTCCTGGGCTGTCTAGTATGGTAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS GCA 72 bp TTTCTCCCCGTCACTGATTTGCAGGGCGGGTGTGTGTaGACACCTCTGGGGTTGGACTTCTCTATTCAAGGA +
Preference number: 6 (lower is better)
Translates to: FLPVTDLQGGCV*TPLGLDFSIQG
Trigger: TCCTTGAATAGAGAAGTCCAACCCCAGAGGTGTGCACACACACCCGCCCTGCAAATCAGTGACGGGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000648113.1
CDS GCA 72 bp GGTCACTGGGAGGGGGCATGCATAATGCCACAGGACTaGAACACACAGAGGGAAGCTTCTTGTAAAGCCAGT +
Preference number: 6 (lower is better)
Translates to: GHWEGACIMPQD*NTQREASCKAS
Trigger: ACTGGCTTTACAAGAAGCTTCCCTCTGTGTGTTGCAGTCCTGTGGCATTATGCATGCCCCCTCCCAGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649145.1
CDS GCA 72 bp CCCTGCCCATATAGGGGGAACAGAATTGGGTGTGAGTaGGTGCCACTAAGACCTCATGCTAGTACTCAAGCC +
Preference number: 6 (lower is better)
Translates to: PCPYRGNRIGCE*VPLRPHASTQA
Trigger: GGCTTGAGTACTAGCATGAGGTCTTAGTGGCACGCACTCACACCCAATTCTGTTCCCCCTATATGGGCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 72 bp GGGGACCAAGTGCCTGTGGGTAGGAAGGACTCAATTTaGTCCTGCTTGGTAGTCACATGGTTTAGACGGGCT +
Preference number: 6 (lower is better)
Translates to: GDQVPVGRKDSI*SCLVVTWFRRA
Trigger: AGCCCGTCTAAACCATGTGACTACCAAGCAGGACCAAATTGAGTCCTTCCTACCCACAGGCACTTGGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460805.5
CDS CAA 72 bp TTCTGCGCAATATCTGACGAAATGGGCACGTTGTATTaGTCTGAGTACCGCCTGCGGATGGGTCCCACCGTG +
Preference number: 6 (lower is better)
Translates to: FCAISDEMGTLY*SEYRLRMGPTV
Trigger: CACGGTGGGACCCATCCGCAGGCGGTACTCAGACAAATACAACGTGCCCATTTCGTCAGATATTGCGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000493089.7
ENST00000614183.1
ENST00000644199.1
ENST00000647741.1
ENST00000647829.1
ENST00000648718.1
ENST00000648748.2
ENST00000649431.1
ENST00000649596.1
ENST00000649610.1
ENST00000650188.1
CDS CAA 72 bp TCCTCTACTCTGATAAAGCACTTATGCAGTGAGAGGTaGGTGCGAATGGCACCCTTCCACGTGGCCGCGTTG +
Preference number: 6 (lower is better)
Translates to: SSTLIKHLCSER*VRMAPFHVAAL
Trigger: CAACGCGGCCACGTGGAAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615603.4
ENST00000648426.1
CDS CAA 72 bp TTTGCTAGAAGCTGGGCTGCCTCAGGTAGCTCCTTTTaGGGTGGTAATCTCGCTCCTGCTCAAAACCCGCGT +
Preference number: 6 (lower is better)
Translates to: FARSWAASGSSF*GGNLAPAQNPR
Trigger: ACGCGGGTTTTGAGCAGGAGCGAGATTACCACCCAAAAAGGAGCTACCTGAGGCAGCCCAGCTTCTAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS TCA 72 bp TGCTGCTGTAACTGCTGCATCTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTAGCCACCTGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: CCCNCCICKSCC*KANCWVATCCC
Trigger: GCAACAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 38 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000497553.3
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000647614.1
ENST00000647776.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS TCA 72 bp AGTCTCTTAAGCCAACTGCTGGGACTCCTAGAGGGCTaGTGGTTTATGAGATGCCACTGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SLLSQLLGLLEG*WFMRCHCCCCC
Trigger: GCAGCAGCAGCAACAGTGGCATCTCATAAACCATCAGCCCTCTAGGAGTCCCAGCAGTTGGCTTAAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318779.7
ENST00000622151.4
ENST00000648107.1
ENST00000648662.1
CDS TCA 72 bp TCTGTGTCCTCCAAGTGTCATCATCCCAAATGTAGTTaGCACCAAGCCCTGGTTAGCCACCTGGCCATGCTG +
Preference number: 6 (lower is better)
Translates to: SVSSKCHHPKCS*HQALVSHLAML
Trigger: CAGCATGGCCAGGTGGCTAACCAGGGCTTGGTGTCAACTACATTTGGGATGATGACACTTGGAGGACACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475937.5
CDS GCA 72 bp ATTGTCAGAAGGCCTTGGCGCTGCAAAGACAGGAGGTaGTGCTGCTGTAACTGCTGCATCTGTAAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: IVRRPWRCKDRR*CCCNCCICKSC
Trigger: GCAGCTTTTACAGATGCAGCAGTTACAGCAGCAGCACCTCCTGTCTTTGCAGCGCCAAGGCCTTCTGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 40 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000497553.3
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000647614.1
ENST00000647776.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS GCA 72 bp ATCTTCGTCTCAGCAACTGCTCCCCACAAGGGGACCTaGAGGACTTCCAACTCCCAAGGGCTTGAAATTAGT +
Preference number: 6 (lower is better)
Translates to: IFVSATAPHKGT*RTSNSQGLEIS
Trigger: ACTAATTTCAAGCCCTTGGGAGTTGGAAGTCCTGCAGGTCCCCTTGTGGGGAGCAGTTGCTGAGACGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318779.7
ENST00000622151.4
ENST00000648107.1
ENST00000648662.1
CDS GCA 72 bp ACAGAGGGACAATGCAAAGCTGTCAGCAATGTCCCCTaGCCATATAGGGGGAACAGAATTGGGTGTGAGTGC +
Preference number: 6 (lower is better)
Translates to: TEGQCKAVSNVP*PYRGNRIGCEC
Trigger: GCACTCACACCCAATTCTGTTCCCCCTATATGGGCAGGGGACATTGCTGACAGCTTTGCATTGTCCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 72 bp CACTCTAGTAAGTGGTTGCTGCCGCCCGACCCATTCTaGATGGCTGAACCGTTACTTTTTGTCTCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: HSSKWLLPPDPF*MAEPLLFVSVP
Trigger: TGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 31 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000471386.3
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648783.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS CCA 72 bp GAATATCCACAAGGCACGTTTATTGCCAACAGGCGATaGAGAGTAGGGTATGCCAGGGGAGGGTCGTTCCTA +
Preference number: 6 (lower is better)
Translates to: EYPQGTFIANRR*RVGYARGGSFL
Trigger: TAGGAACGACCCTCCCCTGGCATACCCTACTCTCCATCGCCTGTTGGCAATAAACGTGCCTTGTGGATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644199.1
CDS CCA 72 bp CAGGAAGAGCCTACTGAGCTCCCTCATGCAGCTTCGTaGATGACGAGAACTCCTGCAAATATGTGTGGCCTA +
Preference number: 6 (lower is better)
Translates to: QEEPTELPHAAS*MTRTPANMCGL
Trigger: TAGGCCACACATATTTGCAGGAGTTCTCGTCATCCACGAAGCTGCATGAGGGAGCTCAGTAGGCTCTTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS CCA 72 bp TACAGGCCAATTTGGGACAGAAAATTTGGACAGGAGTaGCTTACTTGTCCCGTGCACCCCACTCCCACGGTA +
Preference number: 6 (lower is better)
Translates to: YRPIWDRKFGQE*LTCPVHPTPTV
Trigger: TACCGTGGGAGTGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 72 bp CCTGCTTCCTTAATTTGGGTTGTCAAGGTTCAGCAGTaGGAGGCTGTTTACTTTACCGCGGAGTCCGGGGAG +
Preference number: 6 (lower is better)
Translates to: PASLIWVVKVQQ*EAVYFTAESGE
Trigger: CTCCCCGGACTCCGCGGTAAAGTAAACAGCCTCCAACTGCTGAACCTTGACAACCCAAATTAAGGAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650073.1
CDS CAA 90 bp AGTGGCTCACAAGAATCATGTACAGGCCAATTTGGGACAGAAAATTaGGACAGGAGTGGCTTACTTGTCCCGTGCACCCCACTCCCACGG +
Preference number: 6 (lower is better)
Translates to: SGSQESCTGQFGTEN*DRSGLLVPCTPLPR
Trigger: CCGTGGGAGTGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTACATGATTCTTGTGAGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 90 bp GTACAGGCCAATTTGGGACAGAAAATTTGGACAGGAGTGGCTTACTaGTCCCGTGCACCCCACTCCCACGGTAAGCTTTCAGCAGAGATA +
Preference number: 6 (lower is better)
Translates to: VQANLGQKIWTGVAY*SRAPHSHGKLSAEI
Trigger: TATCTCTGCTGAAAGCTTACCGTGGGAGTGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS TCA 72 bp CATACATGTTCCAAAACAGTATCGCAGCTTCACTCCTaGAGCCAGCGAGACTACGAACCCACCGGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: HTCSKTVSQLHS*SQRDYEPTGRN
Trigger: ATTCCTCCCGGTGGGTTCGTAGTCTCGCTGGCTTCAGGAGTGAAGCTGCGATACTGTTTTGGAACATGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS GCA 72 bp CAGACACGATCCTTCTGCTTCGGTATTAACAGCCTGTaGTGGGATGACACCCTTCAAGGTCCAGTAAAAGGG +
Preference number: 6 (lower is better)
Translates to: QTRSFCFGINSL*WDDTLQGPVKG
Trigger: CCCTTTTACTGGACCTTGAAGGGTGTCATCCCAGCACAGGCTGTTAATACCGAAGCAGAAGGATCGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS CCA 72 bp CTAGTAAGTGGTTGCTGCCGCCCGACCCATTCTGGATaGCTGAACCGTTACTTTTTGTCTCAGTCCCAGATT +
Preference number: 6 (lower is better)
Translates to: LVSGCCRPTHSG*LNRYFLSQSQI
Trigger: AATCTGGGACTGAGACAAAAAGTAACGGTTCAGCCATCCAGAATGGGTCGGGCGGCAGCAACCACTTACTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 31 transcripts:
ENST00000318779.7
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000471386.3
ENST00000475937.5
ENST00000484350.5
ENST00000493089.7
ENST00000498215.6
ENST00000610810.5
ENST00000615603.4
ENST00000622151.4
ENST00000648107.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648662.1
ENST00000648710.1
ENST00000648718.1
ENST00000648783.1
ENST00000648826.1
ENST00000648895.1
ENST00000648944.1
ENST00000649431.1
ENST00000649528.3
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000650068.1
ENST00000650295.1
CDS CCA 72 bp TCACTGATTTGCAGGGCGGGTGTGTGTGCACACCTCTaGGGTTGGACTTCTCTATTCAAGGAAACTAGGTGT +
Preference number: 6 (lower is better)
Translates to: SLICRAGVCAHL*GWTSLFKETRC
Trigger: ACACCTAGTTTCCTTGAATAGAGAAGTCCAACCCCAGAGGTGTGCACACACACCCGCCCTGCAAATCAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000648113.1
CDS CAA 72 bp TTTGGGGCCAGGGAGGGTCTGCAACTGTCAAGAGATTaGCAAAAGAGCCCACGATCCTCAAAGTGTCAGAAC +
Preference number: 6 (lower is better)
Translates to: FGAREGLQLSRD*QKSPRSSKCQN
Trigger: GTTCTGACACTTTGAGGATCGTGGGCTCTTTTGCAAATCTCTTGACAGTTGCAGACCCTCCCTGGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS CAA 90 bp CCAAACTCATCCTCTACTCTGATAAAGCACTTATGCAGTGAGAGGTaGGTGCGAATGGCACCCTGGGATAGGAGCAGCAGCAAAGGAGAT +
Preference number: 6 (lower is better)
Translates to: PNSSSTLIKHLCSER*VRMAPWDRSSSKGD
Trigger: ATCTCCTTTGCTGCTGCTCCTATCCCAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000650580.1
CDS TCA 72 bp CTCATGGGACAAACTTTCCCTTTTGGGAGTGTGGACTaGGAGCTGTCCATTGGTAGAGGCATGTGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: LMGQTFPFGSVD*ELSIGRGMWVH
Trigger: ATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTCCCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 38 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS TCA 72 bp TGCTGCTGTAACTGCTGCATCTGTAAAAGCTGCTGCTaGAAAGCCAACTGCTGGGTAGCCACCTGCTCTTTA +
Preference number: 6 (lower is better)
Translates to: CCCNCCICKSCC*KANCWVATCSL
Trigger: TAAAGAGCAGGTGGCTACCCAGCAGTTGGCTTTTCAGCAGCAGCTTTTACAGATGCAGCAGTTACAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485326.7
CDS TCA 72 bp CCTTTTGTGGAGTTGTACCGTTTGTTTCTTATTGTCTaGGAAGCAGTTAGGAGCTTTCTCCCGGAGGGGGCC +
Preference number: 6 (lower is better)
Translates to: PFVELYRLFLIV*EAVRSFLPEGA
Trigger: GGCCCCCTCCGGGAGAAAGCTCCTAACTGCTTCTCAGACAATAAGAAACAAACGGTACAACTCCACAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS TCA 72 bp AAACTCATCCTCTACTCTGATAAAGCACTTATGCAGTaGGAGGTTGGTGCGAATGGCACCCTTCCACGTGGC +
Preference number: 6 (lower is better)
Translates to: KLILYSDKALMQ*EVGANGTLPRG
Trigger: GCCACGTGGAAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615603.4
ENST00000648426.1
CDS GCA 72 bp CAAGTGCCTGTGGGTAGGAAGGACTCAATTTGGTCCTaGTTGGTAGTCACATGGTTTAGACGGGCTTTCGAA +
Preference number: 6 (lower is better)
Translates to: QVPVGRKDSIWS*LVVTWFRRAFE
Trigger: TTCGAAAGCCCGTCTAAACCATGTGACTACCAAGCAGGACCAAATTGAGTCCTTCCTACCCACAGGCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460805.5
CDS GCA 72 bp GACCCAAACTCATCCTCTACTCTGATAAAGCACTTATaGAGTGAGAGGTTGGTGCGAATGGCACCCTTCCAC +
Preference number: 6 (lower is better)
Translates to: DPNSSSTLIKHL*SERLVRMAPFH
Trigger: GTGGAAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615603.4
ENST00000648426.1
CDS GCA 72 bp GACCCAAACTCATCCTCTACTCTGATAAAGCACTTATaGAGTGAGAGGTTGGTGCGAATGGCACCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: DPNSSSTLIKHL*SERLVRMAPWD
Trigger: ATCCCAGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTTGGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000650580.1
CDS CCA 72 bp AGTAATGGTGCAGAAGTCCATAAGCACCCTCGCTCCTaGAACATTAACCACTCTGAGATCCTCAGGGGAAAG +
Preference number: 6 (lower is better)
Translates to: SNGAEVHKHPRS*NINHSEILRGK
Trigger: CTTTCCCCTGAGGATCTCAGAGTGGTTAATGTTCCAGGAGCGAGGGTGCTTATGGACTTCTGCACCATTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CCA 72 bp GTTCAAGAGATCCCAAGAGACTTGCCTCAAACCACGTaGGTAATCAGTGCCCCAACCCTTGCAATTAGTCTC +
Preference number: 6 (lower is better)
Translates to: VQEIPRDLPQTT*VISAPTLAISL
Trigger: GAGACTAATTGCAAGGGTTGGGGCACTGATTACCCACGTGGTTTGAGGCAAGTCTCTTGGGATCTCTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS CCA 72 bp CTCGCAGATAAATGGTTTGCTCAAGGTCAGACGGAGTaGTACCCAGCGAGGTGTCAGGTTTACAGGTCAAAT +
Preference number: 6 (lower is better)
Translates to: LADKWFAQGQTE*YPARCQVYRSN
Trigger: ATTTGACCTGTAAACCTGACACCTCGCTGGGTACCACTCCGTCTGACCTTGAGCAAACCATTTATCTGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 72 bp CGTCCCGTATTCCAGGGATATGCCCTGGATCTGGCTTaGACTGGCTGTCCTTTACATTTTCTTTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: RPVFQGYALDLA*TGCPLHFLSPP
Trigger: TGGTGGAGAAAGAAAATGTAAAGGACAGCCAGTCAAAGCCAGATCCAGGGCATATCCCTGGAATACGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS CAA 72 bp AATTTGGGACAGAAAATTTGGACAGGAGTGGCTTACTaGTCCCGTGCACCCCACTCCCACGGTAAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: NLGQKIWTGVAY*SRAPHSHGKLS
Trigger: TGAAAGCTTACCGTGGGAGTGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 90 bp AAGCTCTGCCTTTCCCTTTTGGGAGTGTGGACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTCATTATTAAGGAGGTCTTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: KLCLSLLGVWTESCP*VEACGFIIKEVLEG
Trigger: ACCTTCCAAGACCTCCTTAATAATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGGCAGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472382.6
CDS CAA 90 bp ACACCACTGTCTCTCAGCTTACCCGAGCTGAAATGCCTCTTTGCTTaGCTGTCATGGTTTAGCTGTCTTCTCTGCGTTCCTACCATTCAG +
Preference number: 6 (lower is better)
Translates to: TPLSLSLPELKCLFA*LSWFSCLLCVPTIQ
Trigger: CTGAATGGTAGGAACGCAGAGAAGACAGCTAAACCATGACAGCAAAGCAAAGAGGCATTTCAGCTCGGGTAAGCTGAGAGACAGTGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS CAA 90 bp TGGTTCCTGAAGGTCAGATTCATGCACAGCGAATGTTCTCCACTGTaGTTGTGGGCTTGTTTCATGTGTGGGGATGTTGATGTGCCAGTG +
Preference number: 6 (lower is better)
Translates to: WFLKVRFMHSECSPL*LWACFMCGDVDVPV
Trigger: CACTGGCACATCAACATCCCCACACATGAAACAAGCCCACAACAACAGTGGAGAACATTCGCTGTGCATGAATCTGACCTTCAGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650555.1
CDS CAA 90 bp GTGGTACCCAGCGAGGTGTCAGGTTTACAGGTCAAATGTCCGTTTTaGATGCATCCAATCAAGGGACAGCCTACTATAGTCTTCAGGCCA +
Preference number: 6 (lower is better)
Translates to: VVPSEVSGLQVKCPF*MHPIKGQPTIVFRP
Trigger: TGGCCTGAAGACTATAGTAGGCTGTCCCTTGATTGGATGCATCAAAAACGGACATTTGACCTGTAAACCTGACACCTCGCTGGGTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS TCA 72 bp GAAACAAGACCACAGACCAGGACCCAGTGGACTCCCTaGGTGTTGAGGGACTTTGGTAAGGAAATAGTACTA +
Preference number: 6 (lower is better)
Translates to: ETRPQTRTQWTP*VLRDFGKEIVL
Trigger: TAGTACTATTTCCTTACCAAAGTCCCTCAACACTCAGGGAGTCCACTGGGTCCTGGTCTGTGGTCTTGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647741.1
ENST00000649081.1
CDS TCA 72 bp AAGAGCCTACTGAGCTCCCTCATGCAGCTTCGTGGATaGCGAGAACTCCTGCAAATATGTGTGGCCTATTTA +
Preference number: 6 (lower is better)
Translates to: KSLLSSLMQLRG*RELLQICVAYL
Trigger: TAAATAGGCCACACATATTTGCAGGAGTTCTCGTCATCCACGAAGCTGCATGAGGGAGCTCAGTAGGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS TCA 72 bp GTCCCGTATTCCAGGGATATGCCCTGGATCTGGCTTTaGCTGGCTGTCCTTTACATTTTCTTTCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: VPYSRDMPWIWL*LAVLYIFFLHH
Trigger: ATGGTGGAGAAAGAAAATGTAAAGGACAGCCAGTCAAAGCCAGATCCAGGGCATATCCCTGGAATACGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS GCA 72 bp CAGAGGAGGAGACACATGTCGTGGTCAGATCCAAACTaGTGTGATTGTTGCCTGTGGTTTCTTCTGCAGTAT +
Preference number: 6 (lower is better)
Translates to: QRRRHMSWSDPN*CDCCLWFLLQY
Trigger: ATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGATCTGACCACGACATGTGTCTCCTCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 39 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS CCA 72 bp GAGGATGCGTGGGCACCGTTTCTTCCTCTATGTAGATaGTATGTTTACCATGAACCGAAACACACGGTGAGT +
Preference number: 6 (lower is better)
Translates to: EDAWAPFLPLCR*YVYHEPKHTVS
Trigger: ACTCACCGTGTGTTTCGGTTCATGGTAAACATACCATCTACATAGAGGAAGAAACGGTGCCCACGCATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS CCA 72 bp GGAACCACATCTAGCAGGAGTAACACAGAGGATGCGTaGGCACCGTTTCTTCCTCTATGTAGATGGTATGTT +
Preference number: 6 (lower is better)
Translates to: GTTSSRSNTEDA*APFLPLCRWYV
Trigger: AACATACCATCTACATAGAGGAAGAAACGGTGCCCACGCATCCTCTGTGTTACTCCTGCTAGATGTGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS CCA 72 bp GCTTGGGCACCAATCATTCTGCCTTTAAAGAAGAGCTaGGTGCTTGAGTCTTATGGGCAAGGACCATATCTG +
Preference number: 6 (lower is better)
Translates to: AWAPIILPLKKS*VLESYGQGPYL
Trigger: CAGATATGGTCCTTGCCCATAAGACTCAAGCACCCAGCTCTTCTTTAAAGGCAGAATGATTGGTGCCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS CCA 72 bp AAGAATCATGTACAGGCCAATTTGGGACAGAAAATTTaGACAGGAGTGGCTTACTTGTCCCGTGCACCCCAC +
Preference number: 6 (lower is better)
Translates to: KNHVQANLGQKI*TGVAYLSRAPH
Trigger: GTGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTACATGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 72 bp CTTTCCCTTTTGGGAGTGTGGACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTCATTATTAAGGAGGTC +
Preference number: 6 (lower is better)
Translates to: LSLLGVWTESCP*VEACGFIIKEV
Trigger: GACCTCCTTAATAATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 39 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS CAA 72 bp TCTCTCAGCTTACCCGAGCTGAAATGCCTCTTTGCTTaGCTGTCATGGTTTAGCTGTCTTCTCTGCGTTCCT +
Preference number: 6 (lower is better)
Translates to: SLSLPELKCLFA*LSWFSCLLCVP
Trigger: AGGAACGCAGAGAAGACAGCTAAACCATGACAGCAAAGCAAAGAGGCATTTCAGCTCGGGTAAGCTGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS CAA 72 bp AGACAGGGCCTGCTAGGTATTTCGGAAGAGTCTAATTaGTATGGGTTGGAACAGGATCGTCTGACCACAGGA +
Preference number: 6 (lower is better)
Translates to: RQGLLGISEESN*YGLEQDRLTTG
Trigger: TCCTGTGGTCAGACGATCCTGTTCCAACCCATACAAATTAGACTCTTCCGAAATACCTAGCAGGCCCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS CAA 72 bp CAAGAATCATGTACAGGCCAATTTGGGACAGAAAATTaGGACAGGAGTGGCTTACTTGTCCCGTGCACCCCA +
Preference number: 6 (lower is better)
Translates to: QESCTGQFGTEN*DRSGLLVPCTP
Trigger: TGGGGTGCACGGGACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTACATGATTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 90 bp TGGGACAAACTTTCCCTTTTGGGAGTGTGGACTGAGAGCTGTCCATaGGTAGAGGCATGTGGGTTCATTATTAAGGAGGTCTTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: WDKLSLLGVWTESCP*VEACGFIIKEVLEG
Trigger: ACCTTCCAAGACCTCCTTAATAATGAACCCACATGCCTCTACCAATGGACAGCTCTCAGTCCACACTCCCAAAAGGGAAAGTTTGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 38 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS CAA 90 bp AACTGCTGTGATTGTTGCCTGTGGTTTCTTCTGCAGTATGAGCACTaGTCACTTCTTTCCAGAGCTGCTGCAGTTCTGTTGGAATCATGC +
Preference number: 6 (lower is better)
Translates to: NCCDCCLWFLLQYEH*SLLSRAAAVLLESC
Trigger: GCATGATTCCAACAGAACTGCAGCAGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 38 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS CAA 90 bp TTAGCATCTGCAATGGTCCATTTCTGCATAAGTGAACATATAGCCTaGCTGCTTGATCGAATAGTCCAGGGTTCTCCGTGTAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LASAMVHFCISEHIA*LLDRIVQGSPCSSS
Trigger: GGAGCTGCTACACGGAGAACCCTGGACTATTCGATCAAGCAGCAAGGCTATATGTTCACTTATGCAGAAATGGACCATTGCAGATGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650073.1
ENST00000650231.1
CDS CAA 90 bp AGCAATCAGAGACAGGGCCTGCTAGGTATTTCGGAAGAGTCTAATTaGTATGGGTTGGAACAGGATCGTCTGACCACAGGAAAACTGACT +
Preference number: 6 (lower is better)
Translates to: SNQRQGLLGISEESN*YGLEQDRLTTGKLT
Trigger: AGTCAGTTTTCCTGTGGTCAGACGATCCTGTTCCAACCCATACAAATTAGACTCTTCCGAAATACCTAGCAGGCCCTGTCTCTGATTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS CAA 90 bp TCTCCACCATCAACCAAACTACCTGTTTATCTCCAGATGCCTAGCTaGCCTAATGGAACACTCCTTAACCCGCCCCAAAATGATTGTCAC +
Preference number: 6 (lower is better)
Translates to: SPPSTKLPVYLQMPS*PNGTLLNPPQNDCH
Trigger: GTGACAATCATTTTGGGGCGGGTTAAGGAGTGTTCCATTAGGCAAGCTAGGCATCTGGAGATAAACAGGTAGTTTGGTTGATGGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS CAA 90 bp AGAACACATCGTCCCGTATTCCAGGGATATGCCCTGGATCTGGCTTaGACTGGCTGTCCTTTACATTTTCTTTCTCCACCATCAACCAAA +
Preference number: 6 (lower is better)
Translates to: RTHRPVFQGYALDLA*TGCPLHFLSPPSTK
Trigger: TTTGGTTGATGGTGGAGAAAGAAAATGTAAAGGACAGCCAGTCAAAGCCAGATCCAGGGCATATCCCTGGAATACGGGACGATGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS TCA 72 bp CGCTGGAGATACATCTCTGCAAATATCGGCTGTGGCTaGAGACCTAACGGCATGAGGTTTGTGCAAGTAATA +
Preference number: 6 (lower is better)
Translates to: RWRYISANIGCG*RPNGMRFVQVI
Trigger: TATTACTTGCACAAACCTCATGCCGTTAGGTCTTCAGCCACAGCCGATATTTGCAGAGATGTATCTCCAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648155.1
CDS TCA 72 bp GCTGGGTGCTTGAGTCTTATGGGCAAGGACCATATCTaGATCATCCTGTATCTCCCCAAATGCCTAGCATAT +
Preference number: 6 (lower is better)
Translates to: AGCLSLMGKDHI*IILYLPKCLAY
Trigger: ATATGCTAGGCATTTGGGGAGATACAGGATGATTCAGATATGGTCCTTGCCCATAAGACTCAAGCACCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS TCA 72 bp TTTCCTACACACCACTGTCTCTCAGCTTACCCGAGCTaGAATGCCTCTTTGCTTTGCTGTCATGGTTTAGCT +
Preference number: 6 (lower is better)
Translates to: FPTHHCLSAYPS*NASLLCCHGLA
Trigger: AGCTAAACCATGACAGCAAAGCAAAGAGGCATTTCAGCTCGGGTAAGCTGAGAGACAGTGGTGTGTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS TCA 72 bp CACAGAAAGGTAGGATGGAGAGTTCTGTCCCGTCCTTaGGTCTACATAAGAACAGAGGGACAATGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: HRKVGWRVLSRP*VYIRTEGQCKA
Trigger: AGCTTTGCATTGTCCCTCTGTTCTTATGTAGACTCAAGGACGGGACAGAACTCTCCATCCTACCTTTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS TCA 72 bp TATCACCTGGGGTGCCTAGTACAATGCTGGCATTTATaGTGTACCAGGATCCGTGCTAAGCTCTTTACAAGC +
Preference number: 6 (lower is better)
Translates to: YHLGCLVQCWHL*CTRIRAKLFTS
Trigger: GCTTGTAAAGAGCTTAGCACGGATCCTGGTACATCATAAATGCCAGCATTGTACTAGGCACCCCAGGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS GCA 72 bp CAACCAAACTACCTGTTTATCTCCAGATGCCTAGCTTaGCTAATGGAACACTCCTTAACCCGCCCCAAAATG +
Preference number: 6 (lower is better)
Translates to: QPNYLFISRCLA*LMEHSLTRPKM
Trigger: CATTTTGGGGCGGGTTAAGGAGTGTTCCATTAGGCAAGCTAGGCATCTGGAGATAAACAGGTAGTTTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS CCA 72 bp GAGCAAAGGGCCCGTATTAAGAAAAGTCTGCAGAGCTaGGAGGAGTCTAGTGCTTATGAACTCTCAAAACTG +
Preference number: 6 (lower is better)
Translates to: EQRARIKKSLQS*EESSAYELSKL
Trigger: CAGTTTTGAGAGTTCATAAGCACTAGACTCCTCCCAGCTCTGCAGACTTTTCTTAATACGGGCCCTTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS CCA 72 bp GCTGTGGCACTGCTATTGGTGAAATGCAAAACTACATaGGATGAGTCAACCATGCAAAGCCAAAGCAACAGC +
Preference number: 6 (lower is better)
Translates to: AVALLLVKCKTT*DESTMQSQSNS
Trigger: GCTGTTGCTTTGGCTTTGCATGGTTGACTCATCCCATGTAGTTTTGCATTTCACCAATAGCAGTGCCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644199.1
CDS CCA 72 bp ATTTGCAGGGCGGGTGTGTGTGCACACCTCTGGGGTTaGACTTCTCTATTCAAGGAAACTAGGTGTAAAATT +
Preference number: 6 (lower is better)
Translates to: ICRAGVCAHLWG*TSLFKETRCKI
Trigger: AATTTTACACCTAGTTTCCTTGAATAGAGAAGTCCAACCCCAGAGGTGTGCACACACACCCGCCCTGCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000648113.1
CDS CCA 72 bp TTACCCGAGCTGAAATGCCTCTTTGCTTTGCTGTCATaGTTTAGCTGTCTTCTCTGCGTTCCTACCATTCAG +
Preference number: 6 (lower is better)
Translates to: LPELKCLFALLS*FSCLLCVPTIQ
Trigger: CTGAATGGTAGGAACGCAGAGAAGACAGCTAAACCATGACAGCAAAGCAAAGAGGCATTTCAGCTCGGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS CCA 72 bp CGTATTCCAGGGATATGCCCTGGATCTGGCTTTGACTaGCTGTCCTTTACATTTTCTTTCTCCACCATCAAC +
Preference number: 6 (lower is better)
Translates to: RIPGICPGSGFD*LSFTFSFSTIN
Trigger: GTTGATGGTGGAGAAAGAAAATGTAAAGGACAGCCAGTCAAAGCCAGATCCAGGGCATATCCCTGGAATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS CCA 72 bp TACTATATCGACCACTGGGTCCCCCGCAAAGGTAGATaGCAATTTTTAGGTGGTATACAGCATCAGTGGTGT +
Preference number: 6 (lower is better)
Translates to: YYIDHWVPRKGR*QFLGGIQHQWC
Trigger: ACACCACTGATGCTGTATACCACCTAAAAATTGCCATCTACCTTTGCGGGGGACCCAGTGGTCGATATAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 72 bp GGCCATTATCTTCTGCAGGATTACTATATCGACCACTaGGTCCCCCGCAAAGGTAGATGGCAATTTTTAGGT +
Preference number: 6 (lower is better)
Translates to: GHYLLQDYYIDH*VPRKGRWQFLG
Trigger: ACCTAAAAATTGCCATCTACCTTTGCGGGGGACCCAGTGGTCGATATAGTAATCCTGCAGAAGATAATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 72 bp GGAAGCCTTTTGTGGAGTTGTACCGTTTGTTTCTTATaGTCTGAGAAGCAGTTAGGAGCTTTCTCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: GSLLWSCTVCFL*SEKQLGAFSRR
Trigger: CCTCCGGGAGAAAGCTCCTAACTGCTTCTCAGACAATAAGAAACAAACGGTACAACTCCACAAAAGGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS CAA 72 bp GTCAGATTCATGCACAGCGAATGTTCTCCACTGTTGTaGTGGGCTTGTTTCATGTGTGGGGATGTTGATGTG +
Preference number: 6 (lower is better)
Translates to: VRFMHSECSPLL*WACFMCGDVDV
Trigger: CACATCAACATCCCCACACATGAAACAAGCCCACAACAACAGTGGAGAACATTCGCTGTGCATGAATCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650555.1
CDS CAA 72 bp TCACAGAAAGGTAGGATGGAGAGTTCTGTCCCGTCCTaGAGTCTACATAAGAACAGAGGGACAATGCAAAGC +
Preference number: 6 (lower is better)
Translates to: SQKGRMESSVPS*SLHKNRGTMQS
Trigger: GCTTTGCATTGTCCCTCTGTTCTTATGTAGACTCAAGGACGGGACAGAACTCTCCATCCTACCTTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 90 bp AGCAACAAATCACAGAAAGGTAGGATGGAGAGTTCTGTCCCGTCCTaGAGTCTACATAAGAACAGAGGGACAATGCAAAGCTGTCAGCAA +
Preference number: 6 (lower is better)
Translates to: SNKSQKGRMESSVPS*SLHKNRGTMQSCQQ
Trigger: TTGCTGACAGCTTTGCATTGTCCCTCTGTTCTTATGTAGACTCAAGGACGGGACAGAACTCTCCATCCTACCTTTCTGTGATTTGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS TCA 72 bp AAACTCATCCTCTACTCTGATAAAGCACTTATGCAGTaGGAGGTTGGTGCGAATGGCACCCCACTGATCTTT +
Preference number: 6 (lower is better)
Translates to: KLILYSDKALMQ*EVGANGTPLIF
Trigger: AAAGATCAGTGGGGTGCCATTCGCACCAACCTCTCACTGCATAAGTGCTTTATCAGAGTAGAGGATGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS TCA 72 bp CTGACACTGAGACTCAGGAGCAGTAGTGGGTCTCTGTaGATAGAAACTGAATCAGAGGTGGAGAGAAACAAA +
Preference number: 6 (lower is better)
Translates to: LTLRLRSSSGSL*IETESEVERNK
Trigger: TTTGTTTCTCTCCACCTCTGATTCAGTTTCTATTCACAGAGACCCACTACTGCTCCTGAGTCTCAGTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647741.1
CDS TCA 72 bp GTTTACCATGAACCGAAACACACGGTGAGTCCTGCGTaGATTCACTTAGGATGCAGTGTAAGATATCTCTGG +
Preference number: 6 (lower is better)
Translates to: VYHEPKHTVSPA*IHLGCSVRYLW
Trigger: CCAGAGATATCTTACACTGCATCCTAAGTGAATTCACGCAGGACTCACCGTGTGTTTCGGTTCATGGTAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647829.1
ENST00000648155.1
CDS GCA 72 bp ATCCAAACTGCTGTGATTGTTGCCTGTGGTTTCTTCTaGAGTATGAGCACTTGTCACTTCTTTCCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: IQTAVIVACGFF*SMSTCHFFPEL
Trigger: CAGCTCTGGAAAGAAGTGACAAGTGCTCATACTGCAGAAGAAACCACAGGCAACAATCACAGCAGTTTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 39 transcripts:
ENST00000318789.10
ENST00000327590.9
ENST00000468577.6
ENST00000472382.6
ENST00000475937.5
ENST00000484350.5
ENST00000485326.7
ENST00000491238.7
ENST00000493089.7
ENST00000497355.7
ENST00000498215.6
ENST00000614176.5
ENST00000615603.4
ENST00000644199.1
ENST00000647614.1
ENST00000648121.1
ENST00000648321.1
ENST00000648380.1
ENST00000648384.1
ENST00000648426.1
ENST00000648710.1
ENST00000648718.1
ENST00000648748.2
ENST00000648794.1
ENST00000649417.1
ENST00000649431.1
ENST00000649513.1
ENST00000649528.3
ENST00000649592.1
ENST00000649596.1
ENST00000649610.1
ENST00000649631.1
ENST00000649695.2
ENST00000650068.1
ENST00000650188.1
ENST00000650387.1
ENST00000650402.1
ENST00000650580.1
ENST00000674446.1
CDS GCA 72 bp TATTTTGAAATGAGTAGGGGAGACCTGTGCCTCTGCTaGATATTCGGGACGGCCGTTAATCTTACCTGTAAA +
Preference number: 6 (lower is better)
Translates to: YFEMSRGDLCLC*IFGTAVNLTCK
Trigger: TTTACAGGTAAGATTAACGGCCGTCCCGAATATGCAGCAGAGGCACAGGTCTCCCCTACTCATTTCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS GCA 72 bp ATATATTTTGAAATGAGTAGGGGAGACCTGTGCCTCTaGTGCATATTCGGGACGGCCGTTAATCTTACCTGT +
Preference number: 6 (lower is better)
Translates to: IYFEMSRGDLCL*CIFGTAVNLTC
Trigger: ACAGGTAAGATTAACGGCCGTCCCGAATATGCAGCAGAGGCACAGGTCTCCCCTACTCATTTCAAAATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS GCA 72 bp AGGCTAATATATTTTGAAATGAGTAGGGGAGACCTGTaGCTCTGCTGCATATTCGGGACGGCCGTTAATCTT +
Preference number: 6 (lower is better)
Translates to: RLIYFEMSRGDL*LCCIFGTAVNL
Trigger: AAGATTAACGGCCGTCCCGAATATGCAGCAGAGGCACAGGTCTCCCCTACTCATTTCAAAATATATTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS GCA 72 bp TTTTTAAAGAACACATCGTCCCGTATTCCAGGGATATaGCCTGGATCTGGCTTTGACTGGCTGTCCTTTACA +
Preference number: 6 (lower is better)
Translates to: FLKNTSSRIPGI*PGSGFDWLSFT
Trigger: TGTAAAGGACAGCCAGTCAAAGCCAGATCCAGGGCATATCCCTGGAATACGGGACGATGTGTTCTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS CCA 72 bp ATTTCCAAACAAACGCAGCTCAGCCTGGGGAAGCGATaGCATAAAAACAGGTTTGCATATACAGAGCTCAGT +
Preference number: 6 (lower is better)
Translates to: ISKQTQLSLGKR*HKNRFAYTELS
Trigger: ACTGAGCTCTGTATATGCAAACCTGTTTTTATGCCATCGCTTCCCCAGGCTGAGCTGCGTTTGTTTGGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS CCA 72 bp CAGTGGCTTACATTTCCAAACAAACGCAGCTCAGCCTaGGGAAGCGATGGCATAAAAACAGGTTTGCATATA +
Preference number: 6 (lower is better)
Translates to: QWLTFPNKRSSA*GSDGIKTGLHI
Trigger: TATATGCAAACCTGTTTTTATGCCATCGCTTCCCCAGGCTGAGCTGCGTTTGTTTGGAAATGTAAGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS CAA 72 bp TATCTCAGAACCAATCTAGGGGTGATACAGCCCCCATaGAGAATGTATGCTGCAGAGGACTGCAATGGTATT +
Preference number: 6 (lower is better)
Translates to: YLRTNLGVIQPP*RMYAAEDCNGI
Trigger: AATACCATTGCAGTCCTCTGCAGCATACATTCTCAATGGGGGCTGTATCACCCCTAGATTGGTTCTGAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CAA 72 bp AGATCCAAACGGACAAAAAGCAAGGCCTTCACTTACTaGATTACTCCGCTAGCAGTGGATCTACAAGGGGTT +
Preference number: 6 (lower is better)
Translates to: RSKRTKSKAFTY*ITPLAVDLQGV
Trigger: AACCCCTTGTAGATCCACTGCTAGCGGAGTAATCAAGTAAGTGAAGGCCTTGCTTTTTGTCCGTTTGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647741.1
ENST00000649081.1
CDS CAA 72 bp GCAATGGTCCATTTCTGCATAAGTGAACATATAGCCTaGCTGCTTGATCGAATAGTCCAGGGTTCTCCGTGT +
Preference number: 6 (lower is better)
Translates to: AMVHFCISEHIA*LLDRIVQGSPC
Trigger: ACACGGAGAACCCTGGACTATTCGATCAAGCAGCAAGGCTATATGTTCACTTATGCAGAAATGGACCATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650073.1
ENST00000650231.1
CDS CAA 72 bp TCAACCAAACTACCTGTTTATCTCCAGATGCCTAGCTaGCCTAATGGAACACTCCTTAACCCGCCCCAAAAT +
Preference number: 6 (lower is better)
Translates to: STKLPVYLQMPS*PNGTLLNPPQN
Trigger: ATTTTGGGGCGGGTTAAGGAGTGTTCCATTAGGCAAGCTAGGCATCTGGAGATAAACAGGTAGTTTGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648748.2
CDS CAA 72 bp AAGGTCAGATTCATGCACAGCGAATGTTCTCCACTGTaGTTGTGGGCTTGTTTCATGTGTGGGGATGTTGAT +
Preference number: 6 (lower is better)
Translates to: KVRFMHSECSPL*LWACFMCGDVD
Trigger: ATCAACATCCCCACACATGAAACAAGCCCACAACAACAGTGGAGAACATTCGCTGTGCATGAATCTGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650555.1
CDS CAA 72 bp AGCGAGGTGTCAGGTTTACAGGTCAAATGTCCGTTTTaGATGCATCCAATCAAGGGACAGCCTACTATAGTC +
Preference number: 6 (lower is better)
Translates to: SEVSGLQVKCPF*MHPIKGQPTIV
Trigger: GACTATAGTAGGCTGTCCCTTGATTGGATGCATCAAAAACGGACATTTGACCTGTAAACCTGACACCTCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 90 bp TGGGTTAATGAGCTATTTATCCAACCATTGAAGGCTGTGTCAAGTTaGGTCATTTCTCCAGGTTCCATCTCTGGAGATAGATCGCTGGAG +
Preference number: 6 (lower is better)
Translates to: WVNELFIQPLKAVSS*VISPGSISGDRSLE
Trigger: CTCCAGCGATCTATCTCCAGAGATGGAACCTGGAGAAATGACCAAACTTGACACAGCCTTCAATGGTTGGATAAATAGCTCATTAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648155.1
CDS CAA 90 bp GGCTTTGGGTTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTTTGCAAGTTTAGAAATGATTGGAAA +
Preference number: 6 (lower is better)
Translates to: GFGFCRLHMQVGHHG*QAFFVFCKFRNDWK
Trigger: TTTCCAATCATTTCTAAACTTGCAAAAGACAAAGAACGCCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAACCCAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648321.1
ENST00000648384.1
ENST00000649417.1
CDS CAA 90 bp AGACAGGGCCTGCTAGGTATTTCGGAAGAGTCTAATTTGTATGGGTaGGAACAGGATCGTCTGACCACAGGAAAACTGACTTCATATAAC +
Preference number: 6 (lower is better)
Translates to: RQGLLGISEESNLYG*EQDRLTTGKLTSYN
Trigger: GTTATATGAAGTCAGTTTTCCTGTGGTCAGACGATCCTGTTCCAACCCATACAAATTAGACTCTTCCGAAATACCTAGCAGGCCCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS TCA 72 bp ACTGAAATGCTAAGGCCAGTGAATCTGCCTCTAAACTaGAACTGGGTAAATGGCCTATCATCAATTCCCAGG +
Preference number: 6 (lower is better)
Translates to: TEMLRPVNLPLN*NWVNGLSSIPR
Trigger: CCTGGGAATTGATGATAGGCCATTTACCCAGTTTCAGTTTAGAGGCAGATTCACTGGCCTTAGCATTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS TCA 72 bp GGGCTATGGAAAATGTGGAGACATCAGGAACGGTTATaGACGTTGGCATGTGTCATTTTTCCAGACCGAAAT +
Preference number: 6 (lower is better)
Translates to: GLWKMWRHQERL*TLACVIFPDRN
Trigger: ATTTCGGTCTGGAAAAATGACACATGCCAACGTTCATAACCGTTCCTGATGTCTCCACATTTTCCATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647741.1
CDS TCA 72 bp ACCAATCATTCTGCCTTTAAAGAAGAGCTGGGTGCTTaGGTCTTATGGGCAAGGACCATATCTGAATCATCC +
Preference number: 6 (lower is better)
Translates to: TNHSAFKEELGA*VLWARTISESS
Trigger: GGATGATTCAGATATGGTCCTTGCCCATAAGACTCAAGCACCCAGCTCTTCTTTAAAGGCAGAATGATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS GCA 72 bp GCTGAACCGTTACTTTTTGTCTCAGTCCCAGATTCTTaGATCATGACTCAAAAACTGTCCTGTCTTCAGGAG +
Preference number: 6 (lower is better)
Translates to: AEPLLFVSVPDS*IMTQKLSCLQE
Trigger: CTCCTGAAGACAGGACAGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622151.4
CDS GCA 72 bp TCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTTaGAGGCGTTCTTTGTCTTTTGCAAGTTTAGAAATG +
Preference number: 6 (lower is better)
Translates to: SVDFTCRWVIMA*RRSLSFASLEM
Trigger: CATTTCTAAACTTGCAAAAGACAAAGAACGCCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648321.1
ENST00000648384.1
ENST00000649417.1
CDS CCA 72 bp CTGAAATGTGCAACATGTAAAAAGTTTGCTAGAAGCTaGGCTGCCTCAGGTAGCTCCTTTTTGGGTGGTAAT +
Preference number: 6 (lower is better)
Translates to: LKCATCKKFARS*AASGSSFLGGN
Trigger: ATTACCACCCAAAAAGGAGCTACCTGAGGCAGCCCAGCTTCTAGCAAACTTTTTACATGTTGCACATTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CAA 90 bp ATATACAGAGCTCAGTGGCAGAAGCGAGAGTTCCGTAGGATTTATTaGACACTTATTTTCCGGGAAGCCTTTTGTGGAGTTGTACCGTTT +
Preference number: 6 (lower is better)
Translates to: IYRAQWQKREFRRIY*TLIFREAFCGVVPF
Trigger: AAACGGTACAACTCCACAAAAGGCTTCCCGGAAAATAAGTGTCAAATAAATCCTACGGAACTCTCGCTTCTGCCACTGAGCTCTGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498215.6
CDS CAA 90 bp TCATATTTGCTCAAGTATTATGGTCCTTTGGAAGGACACAAGACATaGCAGTATCTCAGAACCAATCTAGGGGTGATACAGCCCCCATTG +
Preference number: 6 (lower is better)
Translates to: SYLLKYYGPLEGHKT*QYLRTNLGVIQPPL
Trigger: CAATGGGGGCTGTATCACCCCTAGATTGGTTCTGAGATACTGCAATGTCTTGTGTCCTTCCAAAGGACCATAATACTTGAGCAAATATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS TCA 72 bp TTTGCCTCCACAGTAGCTGGCTGGGCTCTCACTAAATaGCAAAGAAACCACAAGAATTCCTCAAGTAATTCT +
Preference number: 6 (lower is better)
Translates to: FASTVAGWALTK*QRNHKNSSSNS
Trigger: AGAATTACTTGAGGAATTCTTGTGGTTTCTTTGTCATTTAGTGAGAGCCCAGCCAGCTACTGTGGAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000491238.7
ENST00000648748.2
ENST00000649695.2
ENST00000674446.1
CDS GCA 72 bp TCTCACCTAGGATTCCATCCACTCGATGACACTGTTTaGTTCACTGGAAGTAAAGAAAGAGGCTTTCATTCT +
Preference number: 6 (lower is better)
Translates to: SHLGFHPLDDTV*FTGSKERGFHS
Trigger: AGAATGAAAGCCTCTTTCTTTACTTCCAGTGAAGCAAACAGTGTCATCGAGTGGATGGAATCCTAGGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS GCA 72 bp CAACAACAGGGACAGCTGATTTTTAAGGCTTCTGGGTaGTACCCTATTTCAGGTTTTTGTTCCAAATGTGGT +
Preference number: 6 (lower is better)
Translates to: QQQGQLIFKASG*YPISGFCSKCG
Trigger: ACCACATTTGGAACAAAAACCTGAAATAGGGTAGCACCCAGAAGCCTTAAAAATCAGCTGTCCCTGTTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS GCA 72 bp TTATCACCCAAAGAAAAGCCTTCCAGGGAGAAGTTCTaGAGGGCGTCTGGAGATAACCATTTACACATAAAT +
Preference number: 6 (lower is better)
Translates to: LSPKEKPSREKF*RASGDNHLHIN
Trigger: ATTTATGTGTAAATGGTTATCTCCAGACGCCCTGCAGAACTTCTCCCTGGAAGGCTTTTCTTTGGGTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS GCA 72 bp ACAGTGACACCCCTTTGCTTGTATATTATCTATGGCTaGTTTTGTGCTCTAAAGGCAGAGTTGACTAGTTGC +
Preference number: 6 (lower is better)
Translates to: TVTPLCLYIIYG*FCALKAELTSC
Trigger: GCAACTAGTCAACTCTGCCTTTAGAGCACAAAAGCAGCCATAGATAATATACAAGCAAAGGGGTGTCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS GCA 72 bp GCTGAACCGTTACTTTTTGTCTCAGTCCCAGATTCTTaGATCATGACTCAAAAACCATTTCCTGGATGCTTG +
Preference number: 6 (lower is better)
Translates to: AEPLLFVSVPDS*IMTQKPFPGCL
Trigger: CAAGCATCCAGGAAATGGTTTTTGAGTCATGATGCAAGAATCTGGGACTGAGACAAAAAGTAACGGTTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648662.1
CDS CCA 72 bp CATCCCCACCCTTTAATGCTGTCATTATGTATAATGTaGCACACACTGTTATCACCCAAAGAAAAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: HPHPLMLSLCIM*HTLLSPKEKPS
Trigger: GGAAGGCTTTTCTTTGGGTGATAACAGTGTGTGCCACATTATACATAATGACAGCATTAAAGGGTGGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS CAA 72 bp TTCTGTAGACTTCACATGCAGGTGGGTCATCATGGCTaGCAGGCGTTCTTTGTCTTTTGCAAGTTTAGAAAT +
Preference number: 6 (lower is better)
Translates to: FCRLHMQVGHHG*QAFFVFCKFRN
Trigger: ATTTCTAAACTTGCAAAAGACAAAGAACGCCTGCAAGCCATGATGACCCACCTGCATGTGAAGTCTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648321.1
ENST00000648384.1
ENST00000649417.1
CDS CAA 90 bp ATCCAGTTTACGGATGATTCAGGCCACATGCTGAGTATGCCTGTCTaGTGGTCCTTTTACTATTTATTAGACTTTCCAACAGGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: IQFTDDSGHMLSMPV*WSFYYLLDFPTGKR
Trigger: CCTTTTCCCTGTTGGAAAGTCTAATAAATAGTAAAAGGACCACAAGACAGGCATACTCAGCATGTGGCCTGAATCATCCGTAAACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS TCA 72 bp AAAGCAGTAAAGAGGAGACATTATGGTGAACAACAGTaGTGCACCTTCAAGGTATTACCTCCAATCTTAGGC +
Preference number: 6 (lower is better)
Translates to: KAVKRRHYGEQQ*CTFKVLPPILG
Trigger: GCCTAAGATTGGAGGTAATACCTTGAAGGTGCATCACTGTTGTTCACCATAATGTCTCCTCTTTACTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS TCA 72 bp TTAATTAGTATTGCTAGCCCAGGGAAGCATATTTGCTaGGCCTGTCTCTCTGTTTTGACATGCAAGACTTGT +
Preference number: 6 (lower is better)
Translates to: LISIASPGKHIC*ACLSVLTCKTC
Trigger: ACAAGTCTTGCATGTCAAAACAGAGAGACAGGCTCAGCAAATATGCTTCCCTGGGCTAGCAATACTAATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS GCA 72 bp AGATGTCTAGGATTCCATCCACTCGATGACACTGTTTaGTTCACTGGAAGTAAAGAAAGAGGCTTTCATTCT +
Preference number: 6 (lower is better)
Translates to: RCLGFHPLDDTV*FTGSKERGFHS
Trigger: AGAATGAAAGCCTCTTTCTTTACTTCCAGTGAAGCAAACAGTGTCATCGAGTGGATGGAATCCTAGACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647741.1
CDS GCA 72 bp GCACAACAAAGATTAGCATCTGCAATGGTCCATTTCTaGATAAGTGAACATATAGCCTTGCTGCTTGATCGA +
Preference number: 6 (lower is better)
Translates to: AQQRLASAMVHF*ISEHIALLLDR
Trigger: TCGATCAAGCAGCAAGGCTATATGTTCACTTATGCAGAAATGGACCATTGCAGATGCTAATCTTTGTTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650073.1
ENST00000650231.1
CDS CCA 72 bp TTTTCCAAGCAATTTCTGCAGACTTGTGAGAAAGTATaGAGTAGTGACACTTGGCTGCTTTCTCATGTTCTC +
Preference number: 6 (lower is better)
Translates to: FSKQFLQTCEKV*SSDTWLLSHVL
Trigger: GAGAACATGAGAAAGCAGCCAAGTGTCACTACTCCATACTTTCTCACAAGTCTGCAGAAATTGCTTGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620572.1
CDS CCA 72 bp GCCCCCATTGAGAATGTATGCTGCAGAGGACTGCAATaGTATTGGATGACAAATGTCAGATTTATCTATAGA +
Preference number: 6 (lower is better)
Translates to: APIENVCCRGLQ*YWMTNVRFIYR
Trigger: TCTATAGATAAATCTGACATTTGTCATCCAATACCATTGCAGTCCTCTGCAGCATACATTCTCAATGGGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CCA 72 bp AAAAAGTGGCTCACAAGAATCATGTACAGGCCAATTTaGGACAGAAAATTTGGACAGGAGTGGCTTACTTGT +
Preference number: 6 (lower is better)
Translates to: KKWLTRIMYRPI*DRKFGQEWLTC
Trigger: ACAAGTAAGCCACTCCTGTCCAAATTTTCTGTCCCAAATTGGCCTGTACATGATTCTTGTGAGCCACTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 72 bp CAGAGGGAAGCAAATCCAATTCCAAGTAAGTTGAAGTaGCTGACAGATAAGTCAACTCATCCTCAAGCACTT +
Preference number: 6 (lower is better)
Translates to: QREANPIPSKLK*LTDKSTHPQAL
Trigger: AAGTGCTTGAGGATGAGTTGACTTATCTGTCAGCAACTTCAACTTACTTGGAATTGGATTTGCTTCCCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493010.2
ENST00000648783.1
CDS CAA 72 bp ACGGATGATTCAGGCCACATGCTGAGTATGCCTGTCTaGTGGTCCTTTTACTATTTATTAGACTTTCCAACA +
Preference number: 6 (lower is better)
Translates to: TDDSGHMLSMPV*WSFYYLLDFPT
Trigger: TGTTGGAAAGTCTAATAAATAGTAAAAGGACCACAAGACAGGCATACTCAGCATGTGGCCTGAATCATCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS CAA 72 bp ATAAAGTCTCACTGGAGCACAGTGACACCCCTTTGCTaGTATATTATCTATGGCTGCTTTTGTGCTCTAAAG +
Preference number: 6 (lower is better)
Translates to: IKSHWSTVTPLC*YIIYGCFCALK
Trigger: CTTTAGAGCACAAAAGCAGCCATAGATAATATACAAGCAAAGGGGTGTCACTGTGCTCCAGTGAGACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 72 bp GTAAATAAAGTCTCACTGGAGCACAGTGACACCCCTTaGCTTGTATATTATCTATGGCTGCTTTTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: VNKVSLEHSDTP*LVYYLWLLLCS
Trigger: AGAGCACAAAAGCAGCCATAGATAATATACAAGCAAAGGGGTGTCACTGTGCTCCAGTGAGACTTTATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CAA 90 bp ACAGCTTTCTCTACTAATTGGGTTAATGAGCTATTTATCCAACCATaGAAGGCTGTGTCAAGTTTGGTCATTTCTCCAGGTTCCATCTCT +
Preference number: 6 (lower is better)
Translates to: TAFSTNWVNELFIQP*KAVSSLVISPGSIS
Trigger: AGAGATGGAACCTGGAGAAATGACCAAACTTGACACAGCCTTCAATGGTTGGATAAATAGCTCATTAACCCAATTAGTAGAGAAAGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648155.1
CDS TCA 72 bp CCAGTATTGCCAATAAGTACTAAATGGACAGTATGGTaGGCCAAGTTTAAAATAGCAGCTGAACTTAGGGCT +
Preference number: 6 (lower is better)
Translates to: PVLPISTKWTVW*AKFKIAAELRA
Trigger: AGCCCTAAGTTCAGCTGCTATTTTAAACTTGGCTCACCATACTGTCCATTTAGTACTTATTGGCAATACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS TCA 72 bp AAAAGATGTTTGAATAAACAGGAAGTACTGTGCGGCTaGAGCACACTCGAAGAGAAAACACACTGGAACATT +
Preference number: 6 (lower is better)
Translates to: KRCLNKQEVLCG*STLEEKTHWNI
Trigger: AATGTTCCAGTGTGTTTTCTCTTCGAGTGTGCTTCAGCCGCACAGTACTTCCTGTTTATTCAAACATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000491238.7
ENST00000648748.2
ENST00000649659.1
ENST00000649695.2
ENST00000674446.1
CDS TCA 72 bp AGGTTTCACATGCCGGGTCTTTTCTGCATAGATCCTTaGGATAATAATGCCATCTATATGGTCCTCAAGATT +
Preference number: 6 (lower is better)
Translates to: RFHMPGLFCIDP*DNNAIYMVLKI
Trigger: AATCTTGAGGACCATATAGATGGCATTATTATCTCAAGGATCTATGCAGAAAAGACCCGGCATGTGAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493010.2
ENST00000648783.1
CDS CAA 72 bp AACACACAGAGGGAAGCAAATCCAATTCCAAGTAAGTaGAAGTTGCTGACAGATAAGTCAACTCATCCTCAA +
Preference number: 6 (lower is better)
Translates to: NTQREANPIPSK*KLLTDKSTHPQ
Trigger: TTGAGGATGAGTTGACTTATCTGTCAGCAACTTCAACTTACTTGGAATTGGATTTGCTTCCCTCTGTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493010.2
ENST00000648783.1
CDS CAA 72 bp GAGCAATACATGTACAAATCACACAATTTAGTTTCGTaGCAGAAAGCTGTGGCACTGCTATTGGTGAAATGC +
Preference number: 6 (lower is better)
Translates to: EQYMYKSHNLVS*QKAVALLLVKC
Trigger: GCATTTCACCAATAGCAGTGCCACAGCTTTCTGCAACGAAACTAAATTGTGTGATTTGTACATGTATTGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644199.1
CDS CAA 90 bp GAGAAACGAGAGCAATACATGTACAAATCACACAATTTAGTTTCGTaGCAGAAAGCTGTGGCACTGCTATTGGTGAAATGCAAAACTACA +
Preference number: 6 (lower is better)
Translates to: EKREQYMYKSHNLVS*QKAVALLLVKCKTT
Trigger: TGTAGTTTTGCATTTCACCAATAGCAGTGCCACAGCTTTCTGCAACGAAACTAAATTGTGTGATTTGTACATGTATTGCTCTCGTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644199.1
CDS TCA 72 bp GCACAAGTATTTAGTTCTAGGGTCCCCGTAAGCTGCTaGATCAAAATAGAACGAATATTTGCATTAAAGACG +
Preference number: 6 (lower is better)
Translates to: AQVFSSRVPVSC*IKIERIFALKT
Trigger: CGTCTTTAATGCAAATATTCGTTCTATTTTGATTCAGCAGCTTACGGGGACCCTAGAACTAAATACTTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644199.1
CDS TCA 72 bp CAGGGAAGCATATTTGCTGAGCCTGTCTCTCTGTTTTaGCATGCAAGACTTGTGAAATTTAAACATACTTGT +
Preference number: 6 (lower is better)
Translates to: QGSIFAEPVSLF*HARLVKFKHTC
Trigger: ACAAGTATGTTTAAATTTCACAAGTCTTGCATGTCAAAACAGAGAGACAGGCTCAGCAAATATGCTTCCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649328.1
CDS CCA 72 bp TCTCCATTAATAACTCCTACAAACAGTGCTAGTGCTTaGATTGCACAGCTTTCTCTACTAATTGGGTTAATG +
Preference number: 6 (lower is better)
Translates to: SPLITPTNSASA*IAQLSLLIGLM
Trigger: CATTAACCCAATTAGTAGAGAAAGCTGTGCAATCCAAGCACTAGCACTGTTTGTAGGAGTTATTAATGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648155.1
CDS CAA 72 bp AAGATAAGAATCTCTCATCCTGGGTGGGCAACTGTCTaGAAGGACTTTTTGTCTTGTGAATTTTCAGATGAA +
Preference number: 6 (lower is better)
Translates to: KIRISHPGWATV*KDFLSCEFSDE
Trigger: TTCATCTGAAAATTCACAAGACAAAAAGTCCTTCAAGACAGTTGCCCACCCAGGATGAGAGATTCTTATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647649.1
CDS CAA 72 bp TCTACTAATTGGGTTAATGAGCTATTTATCCAACCATaGAAGGCTGTGTCAAGTTTGGTCATTTCTCCAGGT +
Preference number: 6 (lower is better)
Translates to: STNWVNELFIQP*KAVSSLVISPG
Trigger: ACCTGGAGAAATGACCAAACTTGACACAGCCTTCAATGGTTGGATAAATAGCTCATTAACCCAATTAGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648155.1
CDS TCA 72 bp TTACTCAGTCCTTTCTTACTAGTGATACAGCAGACCTaGTTCTGTAATGGGATATTTGCCTCAAATTCTATG +
Preference number: 6 (lower is better)
Translates to: LLSPFLLVIQQT*FCNGIFASNSM
Trigger: CATAGAATTTGAGGCAAATATCCCATTACAGAATCAGGTCTGCTGTATCACTAGTAAGAAAGGACTGAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS TCA 72 bp AGATTTAAACTCTCACATACAAAACCTTGGCTTCCCTaGCAAGGCAGATCTTCTAAACTCAATGTGAGAAAA +
Preference number: 6 (lower is better)
Translates to: RFKLSHTKPWLP*QGRSSKLNVRK
Trigger: TTTTCTCACATTGAGTTTAGAAGATCTGCCTTGTCAGGGAAGCCAAGGTTTTGTATGTGAGAGTTTAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650073.1
CDS CAA 72 bp AATATAGGAATTTCTGGCATTTCATTTCCTGGATGCTaGAGGATTTGCGACTGGCCAAGAAATCTTGAAAAT +
Preference number: 6 (lower is better)
Translates to: NIGISGISFPGC*RICDWPRNLEN
Trigger: ATTTTCAAGATTTCTTGGCCAGTCGCAAATCCTCAAGCATCCAGGAAATGAAATGCCAGAAATTCCTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620572.1
CDS CAA 72 bp AAGAGAGGGAAACAATCCACTTCTCAAATCATGAATTaGTATCAATTTATTCCCCTTGCCTCATTATGGACG +
Preference number: 6 (lower is better)
Translates to: KRGKQSTSQIMN*YQFIPLASLWT
Trigger: CGTCCATAATGAGGCAAGGGGAATAAATTGATACAAATTCATGATTTGAGAAGTGGATTGTTTCCCTCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000614183.1
ENST00000644199.1
ENST00000649081.1
CDS TCA 72 bp AAAGGACCCTGGACACTGAAGCATATTTGCTCCAAATaGCCGACACTAAGATATAATCTAATAAAATTACTG +
Preference number: 6 (lower is better)
Translates to: KGPWTLKHICSK*PTLRYNLIKLL
Trigger: CAGTAATTTTATTAGATTATATCTTAGTGTCGGTCATTTGGAGCAAATATGCTTCAGTGTCCAGGGTCCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327590.9
CDS TCA 72 bp AGAATGTATGCTGCAGAGGACTGCAATGGTATTGGATaGCAAATGTCAGATTTATCTATAGAATATGCTTCT +
Preference number: 6 (lower is better)
Translates to: RMYAAEDCNGIG*QMSDLSIEYAS
Trigger: AGAAGCATATTCTATAGATAAATCTGACATTTGTCATCCAATACCATTGCAGTCCTCTGCAGCATACATTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644199.1
ENST00000649081.1
CDS CAA 72 bp CAATTAAAGCTCACTCCTTTGTTAATGCATCCCCTCTaGTTTAACAGCCCTCAAAATGTAGTTATTTCATGT +
Preference number: 6 (lower is better)
Translates to: QLKLTPLLMHPL*FNSPQNVVISC
Trigger: ACATGAAATAACTACATTTTGAGGGCTGTTAAACAAGAGGGGATGCATTAACAAAGGAGTGAGCTTTAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649081.1
CDS GCA 72 bp CAGATAAACCAATACTTTGCCATTACGCTGCATCATTaGATATTGATTAAAATCGCTGGTACTAACTATAGA +
Preference number: 6 (lower is better)
Translates to: QINQYFAITLHH*ILIKIAGTNYR
Trigger: TCTATAGTTAGTACCAGCGATTTTAATCAATATGCAATGATGCAGCGTAATGGCAAAGTATTGGTTTATCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649417.1
CDS CAA 72 bp CACAAGAATTCCTCAAGTAATTCTTCACTTTCAAAGTaGAAAGATCAGTTGGAGCTTGCAGGTAATTTTCAA +
Preference number: 6 (lower is better)
Translates to: HKNSSSNSSLSK*KDQLELAGNFQ
Trigger: TTGAAAATTACCTGCAAGCTCCAACTGATCTTTCAACTTTGAAAGTGAAGAATTACTTGAGGAATTCTTGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000491238.7
ENST00000648748.2
ENST00000649695.2
ENST00000674446.1
CDS CAA 72 bp AACCAATACTTTGCCATTACGCTGCATCATTGCATATaGATTAAAATCGCTGGTACTAACTATAGATTGTCA +
Preference number: 6 (lower is better)
Translates to: NQYFAITLHHCI*IKIAGTNYRLS
Trigger: TGACAATCTATAGTTAGTACCAGCGATTTTAATCAATATGCAATGATGCAGCGTAATGGCAAAGTATTGGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649417.1