RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000150907

Ensembl transcript IDs: ENST00000379561.6

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAATCTGCACTGTTACTAAACTCGGGTAGCGAAATGCAGGAGGCATaGCTACGTCCTGATGGGACTTACATGGCCACCCCTGGCCACACT +
Preference number: 1 (lower is better)
Translates to: ESALLLNSGSEMQEA*LRPDGTYMATPGHT
Trigger: AGTGTGGCCAGGGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTACCCGAGTTTAGTAACAGTGCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 90 bp AGGCCACATAATGTTTGCTTTCCAGACAGACCAGATGCCTTTCCCTaGACTTCACTGTTCTCAGAGAGCTACCAAGGATTCATGACAGGA +
Preference number: 1 (lower is better)
Translates to: RPHNVCFPDRPDAFP*TSLFSESYQGFMTG
Trigger: TCCTGTCATGAATCCTTGGTAGCTCTCTGAGAACAGTGAAGTCCAGGGAAAGGCATCTGGTCTGTCTGGAAAGCAAACATTATGTGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 90 bp TCATGTGAATTCTGTGGCAACGTGAACAGGTCCAAGGCTGTTCAATaGAGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTC +
Preference number: 1 (lower is better)
Translates to: SCEFCGNVNRSKAVQ*RCRMEIQFFVIRQF
Trigger: GAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCTCCATTGAACAGCCTTGGACCTGTTCACGTTGCCACAGAATTCACATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 90 bp ATTGATAACAGGCTACTTGGTTCTCATGTGAATTCTGTGGCAACGTaGACAGGTCCAAGGCTGTTCAATGGAGATGCAGAATGGAGATTC +
Preference number: 1 (lower is better)
Translates to: IDNRLLGSHVNSVAT*TGPRLFNGDAEWRF
Trigger: GAATCTCCATTCTGCATCTCCATTGAACAGCCTTGGACCTGTTCACGTTGCCACAGAATTCACATGAGAACCAAGTAGCCTGTTATCAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 90 bp TCTAATCTGCAGGGCAGAAGGGAGAATGAGATGAAGTATGAGTGTTaGCATAATTCCTCAAGGCAGAACTACAAAACCAACCTCCACCTG +
Preference number: 1 (lower is better)
Translates to: SNLQGRRENEMKYEC*HNSSRQNYKTNLHL
Trigger: CAGGTGGAGGTTGGTTTTGTAGTTCTGCCTTGAGGAATTATGTCAACACTCATACTTCATCTCATTCTCCCTTCTGCCCTGCAGATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR GCA 90 bp GTGCTTAGAGGAACTTGGGTTTCTAAAACCAGCTATGTCTTGGACTaGCCCAAAATGAGGATGATAGAGTGGTGGCTGTTCAATGAATCT +
Preference number: 1 (lower is better)
Translates to: VLRGTWVSKTSYVLD*PKMRMIEWWLFNES
Trigger: AGATTCATTGAACAGCCACCACTCTATCATCCTCATTTTGGGGCAGTCCAAGACATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 90 bp AGCTACCAAGGATTCATGACAGGATTTCAACACACAATGGGGGCTTaGGAGAGGTATAATTACCCAGACTCAGGAGGAAGATATATTTTC +
Preference number: 1 (lower is better)
Translates to: SYQGFMTGFQHTMGA*ERYNYPDSGGRYIF
Trigger: GAAAATATATCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTGAAATCCTGTCATGAATCCTTGGTAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR GCA 90 bp ATATACAGAAAAATTAGATCCTTCTCAAGAACACAAGAGGAACAGTaGTGTGCACCTGTTCTCTTCATTGTGATGACTTTGGGCTTTCCA +
Preference number: 1 (lower is better)
Translates to: IYRKIRSFSRTQEEQ*CAPVLFIVMTLGFP
Trigger: TGGAAAGCCCAAAGTCATCACAATGAAGAGAACAGGTGCACAGCACTGTTCCTCTTGTGTTCTTGAGAAGGATCTAATTTTTCTGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 90 bp GGTAGCATATATCCAGCAGTTGAACAAGTCCAATTTGTATATCGTTaGAGAATGATTTCCATTTTAAGCATCCTTATCCTCTTCTTGGGA +
Preference number: 1 (lower is better)
Translates to: GSIYPAVEQVQFVYR*RMISILSILILFLG
Trigger: TCCCAAGAAGAGGATAAGGATGCTTAAAATGGAAATCATTCTCCAACGATATACAAATTGGACTTGTTCAACTGCTGGATATATGCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 90 bp CAAAGTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTaGAACGTTGAATATGCAAGTACTAATTACAATGATTTAAGATTA +
Preference number: 1 (lower is better)
Translates to: QSVHNYTSLSCPTRA*NVEYASTNYNDLRL
Trigger: TAATCTTAAATCATTGTAATTAGTACTTGCATATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACACTTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 90 bp ACCAAGCCAATGAAGATGCAATTAACATACAAGACAAAGCAAGTGTaGTGTGGGCTATATACAGAAAAATTAGATCCTTCTCAAGAACAC +
Preference number: 1 (lower is better)
Translates to: TKPMKMQLTYKTKQV*CGLYTEKLDPSQEH
Trigger: GTGTTCTTGAGAAGGATCTAATTTTTCTGTATATAGCCCACATCACACTTGCTTTGTCTTGTATGTTAATTGCATCTTCATTGGCTTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 90 bp GCCAATGAAGATGCAATTAACATACAAGACAAAGCAAGTGTGATGTaGGCTATATACAGAAAAATTAGATCCTTCTCAAGAACACAAGAG +
Preference number: 1 (lower is better)
Translates to: ANEDAINIQDKASVM*AIYRKIRSFSRTQE
Trigger: CTCTTGTGTTCTTGAGAAGGATCTAATTTTTCTGTATATAGCCCACATCACACTTGCTTTGTCTTGTATGTTAATTGCATCTTCATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCATACCCGGGAGGCTGTaGTTAGAGGAACTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPIPGRL*LEELGF
Trigger: AAACCCAAGTTCCTCTAAGCACAGCCTCCCGGGTAT...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGACTAAAAGGGAGTTGGTaGAAGACATCTTTGGACTGC +
Preference number: 2 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRLKGSW*KTSLDC
Trigger: GCAGTCCAAAGATGTCTTTCACCAACTCCCTTTTAG...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCAAGCACACCAGGATCTaGAAATCTTTTCTGCAATTA +
Preference number: 2 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPKHTRI*KSFLQL
Trigger: TAATTGCAGAAAAGATTTTCAGATCCTGGTGTGCTT...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATAATTCTGTGGCAACGTaGACAGGTCCAAGGCTGTTC +
Preference number: 2 (lower is better)
Translates to: VSITIHHFPAQPGPETLNNSVAT*TGPRLF
Trigger: GAACAGCCTTGGACCTGTTCACGTTGCCACAGAATT...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGAAACCTCCACCTGGACTaGAACAAGAGCAAAGAATTA +
Preference number: 2 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRNLHLD*NKSKEL
Trigger: TAATTCTTTGCTCTTGTTTCAGTCCAGGTGGAGGTT...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGAAATGCAGGAGGCATaGCTACGTCCTGATGGGACT +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNEMQEA*LRPDGT
Trigger: AGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTC...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGATCAAAATCCCTCGTTTaGCAAAGGACCATTGCTTTA +
Preference number: 2 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRSKSLV*QRTIAL
Trigger: TAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGA...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTACACAAGAGGAACAGTaGTGTGCACCTGTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFTQEEQ*CAPVLF
Trigger: GAAGAGAACAGGTGCACAGCACTGTTCCTCTTGTGT...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACTCCAGACAGACCAGATaGCTTTCCCTGGACTTCACT +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNSRQTR*LSLDFT
Trigger: AGTGAAGTCCAGGGAAAGGCATCTGGTCTGTCTGGA...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTAGGTTCCTTGTATTATaGTGCAGTAATGGCACGGGA +
Preference number: 2 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFRFLVL*CSNGTG
Trigger: TCCCGTGCCATTACTGCATCATAATACAAGGAACCT...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTCAGCAGCACATAACCTaGACACATTGGGCAAACATC +
Preference number: 2 (lower is better)
Translates to: EANCNARLVCSHKPQYIFQQHIT*THWANI
Trigger: GATGTTTGCCCAATGTGTGCAGGTTATGTGCTGCTG...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp CCCGGGAGGCTGTGCTTAGAGGAACTTGGGTTTCTAAAACCAGCTATGTCTTGGTTTTCTGCAATTATATaGTGTAGTGAGTTTGGCACT +
Preference number: 2 (lower is better)
Translates to: PGRLCLEELGFLKPAMSWFSAII*CSEFGT
Trigger: AGTGCCAAACTCACTACACCATATAATTGCAGAAAA...CCAAGACATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCACAGCCTCCCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACCACACAATGGGGGCTTaGGAGAGGTATAATTACCCA +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNHTMGA*ERYNYP
Trigger: TGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTG...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTGATTTCAACACACAATaGGGGCTTGGGAGAGGTATA +
Preference number: 2 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFDFNTQ*GLGRGI
Trigger: TATACCTCTCCCAAGCCCCCATTGTGTGTTGAAATC...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CAA 90 bp AACATTATGAGGCCTCCCAGGACTACAGAGGTCTCTAGAGAAGACTaGATGCTATGCAGTACGCATAGTTCAGTAGAAGCAGATGAAATT +
Preference number: 2 (lower is better)
Translates to: NIMRPPRTTEVSRED*MLCSTHSSVEADEI
Trigger: AATTTCATCTGCTTCTACTGAACTATGCGTACTGCATAGCATCAAGTCTTCTCTAGAGACCTCTGTAGTCCTGGGAGGCCTCATAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTTGCCCAACCAGGGCCTaGAACGTTGAATATGCAAGT +
Preference number: 2 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFCPTRA*NVEYAS
Trigger: ACTTGCATATTCAACGTTTCAGGCCCTGGTTGGGCA...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGGCTACCAAGGATTCATaGCAGGATTTCAACACACAA +
Preference number: 2 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVATKDS*QDFNTQ
Trigger: TTGTGTGTTGAAATCCTGTCATGAATCCTTGGTAGC...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGAAAGTTCTATTCCATTTaGTACCCATCTGAACTTATG +
Preference number: 2 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRKFYSI*YPSELM
Trigger: CATAAGTTCAGATGGGTAGCAAATGGAATAGAACTT...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGAGGCCACATAATGTTTaGTTTCCAGACAGACCAGAT +
Preference number: 2 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVRPHNV*FPDRPD
Trigger: ATCTGGTCTGTCTGGAAAGCAAACATTATGTGGCCT...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCATAACCTGCACACATTaGGCAAACATCCTGTACAGG +
Preference number: 2 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCITCTH*ANILYR
Trigger: CCTGTACAGGATGTTTGCCCAATGTGTGCAGGTTAT...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGAAGACAAAGCAAGTGTaGTGTGGGCTATATACAGAA +
Preference number: 2 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVKTKQV*CGLYTE
Trigger: TTCTGTATATAGCCCACATCACACTTGCTTTGTCTT...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTGACCATTGCTTTAGATaGAGATCTCCCTTTTCTGAT +
Preference number: 2 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFDHCFR*RSPFSD
Trigger: ATCAGAAAAGGGAGATCTGCATCTAAAGCAATGGTC...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACTCCAAGGCTGTTCAATaGAGATGCAGAATGGAGATT +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNSKAVQ*RCRMEI
Trigger: AATCTCCATTCTGCATCTCCATTGAACAGCCTTGGA...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACTTTGGGCTTTCCACATaGCTTGAAAATACTGATGGA +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNFGLST*LENTDG
Trigger: TCCATCAGTATTTTCAAGTCATGTGGAAAGCCCAAA...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGAAAATTATGAATGCTaGCCCAAATACCTGTGGTTC +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNENYEC*PKYLWF
Trigger: GAACCACAGGTATTTGGGGCAGCATTCATAATTTTC...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTAGAGGAACAGTGCTGTaGACCTGTTCTCTTCATTGT +
Preference number: 2 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFRGTVL*TCSLHC
Trigger: ACAATGAAGAGAACAGGTGCACAGCACTGTTCCTCT...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCTGCCCCAAATACCTGTaGTTCCACAAAATTTACAAG +
Preference number: 2 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCCPKYL*FHKIYK
Trigger: CTTGTAAATTTTGTGGAACCACAGGTATTTGGGGCA...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTCTCAACTCAAAATGGTaGAGTGGATCAAAATCCCTC +
Preference number: 2 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFLNSKW*SGSKSL
Trigger: GAGGGATTTTGATCCACTTCACCATTTTGAGTTGAG...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACCATTTGCTACCCATCTaGACTTATGAACACAAATTC +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNHLLPI*TYEHKF
Trigger: GAATTTGTGTTCATAAGTTCAGATGGGTAGCAAATG...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTTGACAAAGGACCATTaGTTTAGATGCAGATCTCCC +
Preference number: 2 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNLTKDH*FRCRSP
Trigger: GGGAGATCTGCATCTAAAGCAATGGTCCTTTGTCAA...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACTGCACAACTTACAGCTaGTTTTCAAATAAATCTCCC +
Preference number: 2 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNCTTYS*FSNKSP
Trigger: GGGAGATTTATTTGAAAACCAGCTGTAAGTTGTGCA...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTTCCTTATCCTCTTCTTaGGATGTTCCATTGATTTAC +
Preference number: 2 (lower is better)
Translates to: EANCNARLVCSHKPQYIFSLSSS*DVPLIY
Trigger: GTAAATCAATGGAACATCCCAAGAAGAGGATAAGGA...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR GCA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACGAAGACTTGATGCTATaGAGTACGCATAGTTCAGTA +
Preference number: 2 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNEDLML*STHSSV
Trigger: TACTGAACTATGCGTACTGCATAGCATCAAGTCTTC...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CCA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTAGGATGATAGAGTGGTaGCTGTTCAATGAATCTTCA +
Preference number: 2 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFRMIEW*LFNESS
Trigger: TGAAGATTCATTGAACAGCCACCACTCTATCATCCT...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR TCA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTGCTGTCAGACAATCTaGAGTACTTTTAAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNCCQTI*STFKCN
Trigger: GTTACACTTAAAAGTACTTCAGATTGTCTGACAGCA...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 72 bp CTGTTACTAAACTCGGGTAGCGAAATGCAGGAGGCATaGCTACGTCCTGATGGGACTTACATGGCCACCCCT +
Preference number: 3 (lower is better)
Translates to: LLLNSGSEMQEA*LRPDGTYMATP
Trigger: AGGGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTACCCGAGTTTAGTAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCGTCTCTAGAGAAGACTaGATGCTATGCAGTACGCAT +
Preference number: 3 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPVSRED*MLCSTH
Trigger: ATGCGTACTGCATAGCATCAAGTCTTCTCTAGAGAC...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 72 bp CAGTTACATACCCGGGAGGCTGTGCTTAGAGGAACTTaGGTTTCTAAAACCAGCTATGTCTTGGACTGCCCC +
Preference number: 3 (lower is better)
Translates to: QLHTREAVLRGT*VSKTSYVLDCP
Trigger: GGGGCAGTCCAAGACATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCACAGCCTCCCGGGTATGTAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCACAGGAAAAATGTCTTaGCTGCCAAGTCTGACGAAA +
Preference number: 3 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPTGKMS*LPSLTK
Trigger: TTTCGTCAGACTTGGCAGCAAAGACATTTTTCCTGT...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCATCCTTATCCTCTTCTaGGGATGTTCCATTGATTTA +
Preference number: 3 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPILILF*GCSIDL
Trigger: TAAATCAATGGAACATCCCAAGAAGAGGATAAGGAT...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 72 bp AGGCTACTTGGTTCTCATGTGAATTCTGTGGCAACGTaGACAGGTCCAAGGCTGTTCAATGGAGATGCAGAA +
Preference number: 3 (lower is better)
Translates to: RLLGSHVNSVAT*TGPRLFNGDAE
Trigger: TTCTGCATCTCCATTGAACAGCCTTGGACCTGTTCACGTTGCCACAGAATTCACATGAGAACCAAGTAGCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR GCA 72 bp GGAACTTGGGTTTCTAAAACCAGCTATGTCTTGGACTaGCCCAAAATGAGGATGATAGAGTGGTGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: GTWVSKTSYVLD*PKMRMIEWWLF
Trigger: GAACAGCCACCACTCTATCATCCTCATTTTGGGGCAGTCCAAGACATAGCTGGTTTTAGAAACCCAAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR GCA 72 bp TTTGGCACCAAGTTCAGTTACATACCCGGGAGGCTGTaGTTAGAGGAACTTGGGTTTCTAAAACCAGCTATG +
Preference number: 3 (lower is better)
Translates to: FGTKFSYIPGRL*LEELGFLKPAM
Trigger: CATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCACAGCCTCCCGGGTATGTAACTGAACTTGGTGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 72 bp GGATTCATGACAGGATTTCAACACACAATGGGGGCTTaGGAGAGGTATAATTACCCAGACTCAGGAGGAAGA +
Preference number: 3 (lower is better)
Translates to: GFMTGFQHTMGA*ERYNYPDSGGR
Trigger: TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTGAAATCCTGTCATGAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 72 bp TTCTGTGGCAACGTGAACAGGTCCAAGGCTGTTCAATaGAGATGCAGAATGGAGATTCAGTTCTTTGTGATC +
Preference number: 3 (lower is better)
Translates to: FCGNVNRSKAVQ*RCRMEIQFFVI
Trigger: GATCACAAAGAACTGAATCTCCATTCTGCATCTCCATTGAACAGCCTTGGACCTGTTCACGTTGCCACAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 72 bp TTTAGCAGATTGATAACAGGCTACTTGGTTCTCATGTaGATTCTGTGGCAACGTGAACAGGTCCAAGGCTGT +
Preference number: 3 (lower is better)
Translates to: FSRLITGYLVLM*ILWQREQVQGC
Trigger: ACAGCCTTGGACCTGTTCACGTTGCCACAGAATTCACATGAGAACCAAGTAGCCTGTTATCAATCTGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 72 bp AGTCCTTATCTACAGCAGCACATAACCTGCACACATTaGGCAAACATCCTGTACAGGAAAAATGTCTTTGCT +
Preference number: 3 (lower is better)
Translates to: SPYLQQHITCTH*ANILYRKNVFA
Trigger: AGCAAAGACATTTTTCCTGTACAGGATGTTTGCCCAATGTGTGCAGGTTATGTGCTGCTGTAGATAAGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACCATAACCTGCACACATaGGGCAAACATCCTGTACAG +
Preference number: 3 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNHNLHT*GKHPVQ
Trigger: CTGTACAGGATGTTTGCCCAATGTGTGCAGGTTATG...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACCCAGGGCCTGAAACGTaGAATATGCAAGTACTAATT +
Preference number: 3 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNPGPET*NMQVLI
Trigger: AATTAGTACTTGCATATTCAACGTTTCAGGCCCTGG...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGCTTATATACAAAACTaGAAAGCACACCAGGATCTG +
Preference number: 3 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNAYIQN*KAHQDL
Trigger: CAGATCCTGGTGTGCTTTCAAGTTTTGTATATAAGC...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCAAAACTAAAAGGGAGTaGGTGAAAGACATCTTTGGA +
Preference number: 3 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCKTKRE*VKDIFG
Trigger: TCCAAAGATGTCTTTCACCAACTCCCTTTTAGTTTT...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR GCA 72 bp AAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTaGTTTAGATGCAGATCTCCCTTTTCTGATCTACAA +
Preference number: 3 (lower is better)
Translates to: KWIKIPRLTKDH*FRCRSPFSDLQ
Trigger: TTGTAGATCAGAAAAGGGAGATCTGCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR GCA 72 bp TCCTTATCCTCTTCTTGGGATGTTCCATTGATTTACTaGTCACTGGGATACATGTGCTCATTTAGACTTTGT +
Preference number: 3 (lower is better)
Translates to: SLSSSWDVPLIY*SLGYMCSFRLC
Trigger: ACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGGAACATCCCAAGAAGAGGATAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR TCA 72 bp CATAACTATACATCACTTTCCTGCCCAACCAGGGCCTaGAACGTTGAATATGCAAGTACTAATTACAATGAT +
Preference number: 3 (lower is better)
Translates to: HNYTSLSCPTRA*NVEYASTNYND
Trigger: ATCATTGTAATTAGTACTTGCATATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR-3UTR CAA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTTATGGTGTAGTGAGTTaGGCACTTCATTGTAATGAA +
Preference number: 3 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFYGVVS*ALHCNE
Trigger: TTCATTACAATGAAGTGCCAAACTCACTACACCATA...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CCA 72 bp GATGCAATTAACATACAAGACAAAGCAAGTGTGATGTaGGCTATATACAGAAAAATTAGATCCTTCTCAAGA +
Preference number: 3 (lower is better)
Translates to: DAINIQDKASVM*AIYRKIRSFSR
Trigger: TCTTGAGAAGGATCTAATTTTTCTGTATATAGCCCACATCACACTTGCTTTGTCTTGTATGTTAATTGCATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCTGCGGCGGGACGAGCTaGTCTTGCGCGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPCGGTS*SCAAAP
Trigger: CGGGGCAGCCGCGCAAGAGCAGCTCGTCCCGCCGCA...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGGCGCCGCGCTCCAGCTaGCAGGGCCGCGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVAPRSS*QGRGRK
Trigger: CTTCCGTCCGCGGCCCTGTCAGCTGGAGCGCGGCGC...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp CCCGGGAGGCTGTGCTTAGAGGAACTTGGGTTTCTAAAACCAGCTATGTCTTGGCCAGAACCCGGCTGTTaGGCTGGGCTACCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PGRLCLEELGFLKPAMSWPEPGC*AGLPQD
Trigger: ATCCTGGGGTAGCCCAGCCCAACAGCCGGGTTCTGG...CCAAGACATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCACAGCCTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCCCCATCATGACGTTCTaGCCCAGAACCCGGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPPIMTF*PRTRLL
Trigger: CAACAGCCGGGTTCTGGGCCAGAACGTCATGATGGG...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCCTGATGGGACTTACATaGCCACCCCTGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPLMGLT*PPLATL
Trigger: CAGTGTGGCCAGGGGTGGCCATGTAAGTCCCATCAG...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp AATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAACGGAGCCGGGCGCCTaGGGGAAGTCCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NGDSVLCDPSVPQKTGSTTEPGA*GKSSLS
Trigger: GGAGAGCGAGGACTTCCCGCAGGCGCCCGGCTCCGT...TGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTCCGACGGCGCCGGGCTaGAGGTGGCCGAGTTGGACT +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFPTAPG*RWPSWT
Trigger: AGTCCAACTCGGCCACCTCCAGCCCGGCGCCGTCGG...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGATCCCCAGCACCCTCCTaGCCAGACTGGAGAGATGCT +
Preference number: 4 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRSPAPS*PDWRDA
Trigger: AGCATCTCTCCAGTCTGGCCAGGAGGGTGCTGGGGA...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp AGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGTCGATCTCCACCACCTaGGGCGCCTCGGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: RCRMEIQFFVIRQFRRKQSISTT*GASAMV
Trigger: CACCATGGCCGAGGCGCCTCAGGTGGTGGAGATCGA...CTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp AATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAGGTTGCCCCACGCGTTaGGGCGGGACGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: NGDSVLCDPSVPQKTGSTGCPTR*GGTSCS
Trigger: AGAGCAGCTCGTCCCGCCGCAACGCGTGGGGCAACC...TGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATCACACTGCCAGGCTGTaGCCACCTCAAGGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VSITIHHFPAQPGPETLNHTARL*PPQGEA
Trigger: GGCCTCTCCTTGAGGTGGGCACAGCCTGGCAGTGTG...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATGGACGGTCCGAGATTTaGGGGAACGAAGCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: VSITIHHFPAQPGPETLNGRSEI*GNEAGA
Trigger: CGCACCGGCTTCGTTCCCCCAAATCTCGGACCGTCC...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCGATCTACAAACATTATaGGGCCTCCCAGGACTACAG +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPDLQTL*GLPGLQ
Trigger: CTGTAGTCCTGGGAGGCCTCATAATGTTTGTAGATC...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGAGGCATGACTACGTCCTaGTGGGACTTACATGGCCAC +
Preference number: 4 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRGMTTS*WDLHGH
Trigger: GTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCC...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTTGAATGTGGCGGCTaGGGCAGCGGCTGCTGCGAC +
Preference number: 4 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNVECGG*GSGCCD
Trigger: GTCGCAGCAGCCGCTGCCGCAGCCGCCACATTCAAC...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTGGGGAACGAAGCCGGTaGGGCGAGCGGACGGAAACT +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFGERSR*GERTET
Trigger: AGTTTCCGTCCGCTCGCCGCACCGGCTTCGTTCCCC...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCGAAGGCGCGGCGGAGTaGAAGCGCGAGCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCEGAAE*KREPRT
Trigger: AGTTCTGGGCTCGCGCTTCCACTCCGCCGCGCCTTC...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp CCCGGGAGGCTGTGCTTAGAGGAACTTGGGTTTCTAAAACCAGCTATGTCTTGGTGCCCAACCAGGGCCTaGAACGTTGAATATGCAAGT +
Preference number: 4 (lower is better)
Translates to: PGRLCLEELGFLKPAMSWCPTRA*NVEYAS
Trigger: ACTTGCATATTCAACGTTTCAGGCCCTGGTTGGGCA...CCAAGACATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCACAGCCTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCCCAGTTCCTTCATTCTaGACACGAATGAACTTGCTG +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPPVPSF*TRMNLL
Trigger: CAGCAAGTTCATTCGTGTGCAGAATGAAGGAACTGG...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCGTGGCCGAGTTGGACTaGCTAAACTCCGGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCVAELD*LNSGLG
Trigger: GCCCAGGCCGGAGTTTAGCCAGTCCAACTCGGCCAC...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTACCCGGCTGTTGGGCTaGGCTACCCCAGGATCAACT +
Preference number: 4 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFTRLLG*ATPGST
Trigger: AGTTGATCCTGGGGTAGCCCAGCCCAACAGCCGGGT...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATAAGTCATCATTGCTGTaGGAGCCAGGGCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VSITIHHFPAQPGPETLNKSSLL*EPGLAG
Trigger: GCCTGCAAGCCCTGGCTCTCACAGCAATGATGACTT...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCTACTTGGTTCTCATGTaGATTCTGTGGCAACGTGAA +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPYLVLM*ILWQRE
Trigger: TTCACGTTGCCACAGAATTCACATGAGAACCAAGTA...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCGCTACCAAGGATTCATaGCAGGATTTCAACACACAA +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPATKDS*QDFNTQ
Trigger: TTGTGTGTTGAAATCCTGTCATGAATCCTTGGTAGC...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCAGCTATGTCTTGGACTaGCCCAAAATGAGGATGATA +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPSYVLD*PKMRMI
Trigger: TATCATCCTCATTTTGGGGCAGTCCAAGACATAGCT...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCACGAGCGGACGGAAACTaGGAGGAAGGCGCGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSRADGN*EEGAAE
Trigger: CTCCGCCGCGCCTTCCTCCCAGTTTCCGTCCGCTCG...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCTCAAAATCCCTCGTTTaGCAAAGGACCATTGCTTTA +
Preference number: 4 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPSKSLV*QRTIAL
Trigger: TAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGA...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp CCCGGGAGGCTGTGCTTAGAGGAACTTGGGTTTCTAAAACCAGCTATGTCTTGGTATCAAAGTCATCATTaGTGTGAGAGCCAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGRLCLEELGFLKPAMSWYQSHH*CESQGL
Trigger: CAAGCCCTGGCTCTCACAGCAATGATGACTTTGATA...CCAAGACATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCACAGCCTCCCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATGAGATGCTTTCTTCTTaGCAGCTCGGCTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSITIHHFPAQPGPETLNEMLSS*QLGFGS
Trigger: AGAGCCGAAGCCGAGCTGCCAAGAAGAAAGCATCTC...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACACTGCAGATGTCTGCTaGGCATGTCCAGGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNTADVC*ACPGWV
Trigger: TACCCACCCTGGACATGCTCAGCAGACATCTGCAGT...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTGGGACGCCCGTTAACTaGAGATGTCTGCTGAGCATG +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFGTPVN*RCLLSM
Trigger: CATGCTCAGCAGACATCTGCAGTTAACGGGCGTCCC...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp CCCGGGAGGCTGTGCTTAGAGGAACTTGGGTTTCTAAAACCAGCTATGTCTTGGGTTCCATTGATTTACTaGTCACTGGGATACATGTGC +
Preference number: 4 (lower is better)
Translates to: PGRLCLEELGFLKPAMSWVPLIY*SLGYMC
Trigger: GCACATGTATCCCAGTGAGCAGTAAATCAATGGAAC...CCAAGACATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCACAGCCTCCCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGACTCGGGTAGCGAAATaGAGGAGGCATGACTACGTC +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVTRVAK*RRHDYV
Trigger: GACGTAGTCATGCCTCCTGCATTTCGCTACCCGAGT...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCTTCATACCCGAGGTGTaGGGCATGGTGCTTACCGTG +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCFIPEV*GMVLTV
Trigger: CACGGTAAGCACCATGCCCCACACCTCGGGTATGAA...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGACTCGACTTATTGTCCTaGAGTGTTTGTATAGGCATC +
Preference number: 4 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRLDLLS*SVCIGI
Trigger: GATGCCTATACAAACACTTCAGGACAATAAGTCGAG...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCGCCAGACTGGAGAGATaGTTTCTTCTTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCARLER*FLLGSS
Trigger: CGAGCTGCCAAGAAGAAAGCATCTCTCCAGTCTGGC...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCAATGGTGCTTACCGTGTaGGGCAGGGGACGCCCGTTA +
Preference number: 4 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSMVLTV*GRGRPL
Trigger: TAACGGGCGTCCCCTGCCCCACACGGTAAGCACCAT...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATCACACAATGGGGGCTTaGGAGAGGTATAATTACCCA +
Preference number: 4 (lower is better)
Translates to: VSITIHHFPAQPGPETLNHTMGA*ERYNYP
Trigger: TGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTG...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGAGTCTAAGCGCTCAATaGACATGCCATCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVSLSAQ*TCHPSH
Trigger: GTGACTTGGATGGCATGTTCATTGAGCGCTTAGACT...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTAATTCTGTGGCAACGTaGACAGGTCCAAGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFNSVAT*TGPRLF
Trigger: GAACAGCCTTGGACCTGTTCACGTTGCCACAGAATT...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGAATGAAGTATGAGTGTTaGCATAATTCCTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRMKYEC*HNSSRQ
Trigger: CTGCCTTGAGGAATTATGTCAACACTCATACTTCAT...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp AGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGCAGCAGCACATAACCTaGACACATTGGGCAAACATC +
Preference number: 4 (lower is better)
Translates to: RCRMEIQFFVIRQFRRKQQQHIT*THWANI
Trigger: GATGTTTGCCCAATGTGTGCAGGTTATGTGCTGCTG...CTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp AGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGACACAAGAGGAACAGTaGTGTGCACCTGTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RCRMEIQFFVIRQFRRKQTQEEQ*CAPVLF
Trigger: GAAGAGAACAGGTGCACAGCACTGTTCCTCTTGTGT...CTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCATACCCGGGAGGCTGTaGTTAGAGGAACTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCIPGRL*LEELGF
Trigger: AAACCCAAGTTCCTCTAAGCACAGCCTCCCGGGTAT...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp AATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACATCCAGACAGACCAGATaGCTTTCCCTGGACTTCACT +
Preference number: 4 (lower is better)
Translates to: NGDSVLCDPSVPQKTGSTSRQTR*LSLDFT
Trigger: AGTGAAGTCCAGGGAAAGGCATCTGGTCTGTCTGGA...TGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTCATCTTTGCGGCAGATaGCGGGTACACCATAGAATG +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFHLCGR*RVHHRM
Trigger: CATTCTATGGTGTACCCGCCATCTGCCGCAAAGATG...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACCTTGGGAGCTTCTCCTaGTGGAGAAGGCCCATTCTG +
Preference number: 4 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNLGSFS*WRRPIL
Trigger: CAGAATGGGCCTTCTCCACCAGGAGAAGCTCCCAAG...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGTTCGGTCATAATGGGTaGGAGTCTCCCACTAATAGT +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVFGHNG*ESPTNS
Trigger: ACTATTAGTGGGAGACTCTCACCCATTATGACCGAA...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp AGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGTATGTGTCGTTGTCTTaGCACTGTGTGGGAAGCTTT +
Preference number: 4 (lower is better)
Translates to: RCRMEIQFFVIRQFRRKQYVSLS*HCVGSF
Trigger: AAAGCTTCCCACACAGTGTCAAGACAACGACACATA...CTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTCTAAAAGGGAGTTGGTaGAAGACATCTTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFLKGSW*KTSLDC
Trigger: GCAGTCCAAAGATGTCTTTCACCAACTCCCTTTTAG...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATAACCTCCACCTGGACTaGAACAAGAGCAAAGAATTA +
Preference number: 4 (lower is better)
Translates to: VSITIHHFPAQPGPETLNNLHLD*NKSKEL
Trigger: TAATTCTTTGCTCTTGTTTCAGTCCAGGTGGAGGTT...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGGGTACACCATAGAATaGACATCCCCTTCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNGYTIE*TSPSPR
Trigger: TCTTGGAGAAGGGGATGTGCATTCTATGGTGTACCC...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp AGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGCCATGTTTTCGGGATTaGTTATCTCAGACAGACTGG +
Preference number: 4 (lower is better)
Translates to: RCRMEIQFFVIRQFRRKQPCFRD*LSQTDW
Trigger: CCAGTCTGTCTGAGATAAGCAATCCCGAAAACATGG...CTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTTTCTGCCATAGCCATTaGAGCTGCTCACGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFFCHSH*SCSRRS
Trigger: ACTCCTCCGTGAGCAGCTGCAATGGCTATGGCAGAA...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGATTCAAACTGGTGTTTaGTGGCGCAAACGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVIQTGV*WRKRVA
Trigger: TGCTACTCGTTTGCGCCACCAAACACCAGTTTGAAT...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTATAACCTGCACACATTaGGCAAACATCCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFITCTH*ANILYR
Trigger: CCTGTACAGGATGTTTGCCCAATGTGTGCAGGTTAT...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CAA 72 bp CAGTCCTTATCTACAGCAGCACATAACCTGCACACATaGGGCAAACATCCTGTACAGGAAAAATGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QSLSTAAHNLHT*GKHPVQEKCLC
Trigger: GCAAAGACATTTTTCCTGTACAGGATGTTTGCCCAATGTGTGCAGGTTATGTGCTGCTGTAGATAAGGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGCTCAACTCAAAATGGTaGAGTGGATCAAAATCCCTC +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVLNSKW*SGSKSL
Trigger: GAGGGATTTTGATCCACTTCACCATTTTGAGTTGAG...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATACAAGGCTGCATAGGTaGTATCATTTGCACATTTCA +
Preference number: 4 (lower is better)
Translates to: VSITIHHFPAQPGPETLNTRLHR*YHLHIS
Trigger: TGAAATGTGCAAATGATATCACCTATGCAGCCTTGT...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTCTTGGGATGTTCCATTaGTTTACTGCTCACTGGGAT +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFLGMFH*FTAHWD
Trigger: ATCCCAGTGAGCAGTAAATCAATGGAACATCCCAAG...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACAGAGGAACAGTGCTGTaGACCTGTTCTCTTCATTGT +
Preference number: 4 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNRGTVL*TCSLHC
Trigger: ACAATGAAGAGAACAGGTGCACAGCACTGTTCCTCT...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTGCAAAGGGCTCATGCTaGATTGGCCATATGTATATT +
Preference number: 4 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFAKGSC*IGHMYI
Trigger: AATATACATATGGCCAATCCAGCATGAGCCCTTTGC...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGATTTTCTGCAATTATATaGTGTAGTGAGTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRFSAII*CSEFGT
Trigger: AGTGCCAAACTCACTACACCATATAATTGCAGAAAA...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTCCAAGGCTGTTCAATaGAGATGCAGAATGGAGATT +
Preference number: 4 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFSKAVQ*RCRMEI
Trigger: AATCTCCATTCTGCATCTCCATTGAACAGCCTTGGA...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGATTTCAACACACAATaGGGGCTTGGGAGAGGTATA +
Preference number: 4 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNDFNTQ*GLGRGI
Trigger: TATACCTCTCCCAAGCCCCCATTGTGTGTTGAAATC...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp AATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAACTGTAATGCCAGGTTaGTCTGTTCGCATAAACCAC +
Preference number: 4 (lower is better)
Translates to: NGDSVLCDPSVPQKTGSTTVMPG*SVRINH
Trigger: GTGGTTTATGCGAACAGACCAACCTGGCATTACAGT...TGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CAA 72 bp CAACTCAAAATGGTGAAGTGGATCAAAATCCCTCGTTaGACAAAGGACCATTGCTTTAGATGCAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: QLKMVKWIKIPR*TKDHCFRCRSP
Trigger: GGGAGATCTGCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCATTTTGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp AATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACATCTCTAGAGAAGACTTaGTGCTATGCAGTACGCATA +
Preference number: 4 (lower is better)
Translates to: NGDSVLCDPSVPQKTGSTSLEKT*CYAVRI
Trigger: TATGCGTACTGCATAGCATCAAGTCTTCTCTAGAGA...TGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp ATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAAACAAAAGGCACGGGAGGAAAGTaGCAGTACGTAGTAATAGAA +
Preference number: 4 (lower is better)
Translates to: IQFFVIRQFRRKQVVQTKGTGGK*QYVVIE
Trigger: TTCTATTACTACGTACTGTCACTTTCCTCCCGTGCC...TTTTGTTTGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTTTTGGTAGTTTGGGCTaGGTGAATTCAAACTGGTGT +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFFGSLG*VNSNWC
Trigger: ACACCAGTTTGAATTCACCCAGCCCAAACTACCAAA...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp AGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGTGCCCCAAATACCTGTaGTTCCACAAAATTTACAAG +
Preference number: 4 (lower is better)
Translates to: RCRMEIQFFVIRQFRRKQCPKYL*FHKIYK
Trigger: CTTGTAAATTTTGTGGAACCACAGGTATTTGGGGCA...CTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGAGGATGATAGAGTGGTaGCTGTTCAATGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVRMIEW*LFNESS
Trigger: TGAAGATTCATTGAACAGCCACCACTCTATCATCCT...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp ATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAAACAAAAAGGTTCCTTGTATTATaGTGCAGTAATGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: IQFFVIRQFRRKQVVQTKRFLVL*CSNGTG
Trigger: TCCCGTGCCATTACTGCATCATAATACAAGGAACCT...TTTTGTTTGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAAACAAAACTTTTAAGTGTAACCTaGTCACTAACCCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: IQFFVIRQFRRKQVVQTKLLSVT*SLTLSL
Trigger: CAGGCTGAGGGTTAGTGAGCAGGTTACACTTAAAAG...TTTTGTTTGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGAATGAAAATTATGAATaGTGCCCCAAATACCTGTGG +
Preference number: 4 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVNENYE*CPKYLW
Trigger: CCACAGGTATTTGGGGCAGCATTCATAATTTTCATT...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACCAAGAACGTGGAATCTaGACTGTTACTAAACTCGGG +
Preference number: 4 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNQERGI*TVTKLG
Trigger: CCCGAGTTTAGTAACAGTGCAGATTCCACGTTCTTG...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTATGAGGATGATAGAGTaGTGGCTGTTCAATGAATCT +
Preference number: 4 (lower is better)
Translates to: EANCNARLVCSHKPQYIFMRMIE*WLFNES
Trigger: AGATTCATTGAACAGCCACCACTCTATCATCCTCAT...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGCTTAGAGGAACTTaGGTTTCTAAAACCAGCTAT +
Preference number: 4 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNVLRGT*VSKTSY
Trigger: ATAGCTGGTTTTAGAAACCCAAGTTCCTCTAAGCAC...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCTGCTGTCAGACAATCTaGAGTACTTTTAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCCCQTI*STFKCN
Trigger: GTTACACTTAAAAGTACTTCAGATTGTCTGACAGCA...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCCATTTGCTACCCATCTaGACTTATGAACACAAATTC +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCHLLPI*TYEHKF
Trigger: GAATTTGTGTTCATAAGTTCAGATGGGTAGCAAATG...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCTGCACAACTTACAGCTaGTTTTCAAATAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCCTTYS*FSNKSP
Trigger: GGGAGATTTATTTGAAAACCAGCTGTAAGTTGTGCA...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTTTTGGGCTTTCCACATaGCTTGAAAATACTGATGGA +
Preference number: 4 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFFGLST*LENTDG
Trigger: TCCATCAGTATTTTCAAGTCATGTGGAAAGCCCAAA...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTGAAGACTTGATGCTATaGAGTACGCATAGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFEDLML*STHSSV
Trigger: TACTGAACTATGCGTACTGCATAGCATCAAGTCTTC...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCATTGACAAAGGACCATTaGTTTAGATGCAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSLTKDH*FRCRSP
Trigger: GGGAGATCTGCATCTAAAGCAATGGTCCTTTGTCAA...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCAAGGCCACATAATGTTTaGTTTCCAGACAGACCAGAT +
Preference number: 4 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSRPHNV*FPDRPD
Trigger: ATCTGGTCTGTCTGGAAAGCAAACATTATGTGGCCT...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR TCA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACAAGCACACCAGGATCTaGAAATCTTTTCTGCAATTA +
Preference number: 4 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNKHTRI*KSFLQL
Trigger: TAATTGCAGAAAAGATTTTCAGATCCTGGTGTGCTT...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCAGAAAATTATGAATGCTaGCCCAAATACCTGTGGTTC +
Preference number: 4 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSENYEC*PKYLWF
Trigger: GAACCACAGGTATTTGGGGCAGCATTCATAATTTTC...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCAGACCATTGCTTTAGATaGAGATCTCCCTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSDHCFR*RSPFSD
Trigger: ATCAGAAAAGGGAGATCTGCATCTAAAGCAATGGTC...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CCA 90 bp ATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAAACAAAATCCTTATCCTCTTCTTaGGATGTTCCATTGATTTAC +
Preference number: 4 (lower is better)
Translates to: IQFFVIRQFRRKQVVQTKSLSSS*DVPLIY
Trigger: GTAAATCAATGGAACATCCCAAGAAGAGGATAAGGA...TTTTGTTTGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
3UTR CAA 72 bp AGAATGATTTCCATTTTAAGCATCCTTATCCTCTTCTaGGGATGTTCCATTGATTTACTGCTCACTGGGATA +
Preference number: 4 (lower is better)
Translates to: RMISILSILILF*GCSIDLLLTGI
Trigger: TATCCCAGTGAGCAGTAAATCAATGGAACATCCCAAGAAGAGGATAAGGATGCTTAAAATGGAAATCATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR GCA 90 bp ATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAAACAAAAAAGTTCTATTCCATTTaGTACCCATCTGAACTTATG +
Preference number: 4 (lower is better)
Translates to: IQFFVIRQFRRKQVVQTKKFYSI*YPSELM
Trigger: CATAAGTTCAGATGGGTAGCAAATGGAATAGAACTT...TTTTGTTTGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS GCA 90 bp GACGCCGCGGGCCGCTTGCTCTCCCCAGCGGCGCGCCCGCTGCGCTaGTGCCTGTTGAATGTGGCGGCTGCGGCAGCGGCTGCTGCGACT +
Preference number: 5 (lower is better)
Translates to: DAAGRLLSPAARPLR*CLLNVAAAAAAAAT
Trigger: AGTCGCAGCAGCCGCTGCCGCAGCCGCCACATTCAACAGGCAGCAGCGCAGCGGGCGCGCCGCTGGGGAGAGCAAGCGGCCCGCGGCGTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS GCA 90 bp AGGGGGCGCGAAGGGACGGTCCGAGATTTGGGGGAACGAAGCCGGTaGGGCGAGCGGACGGAAACTGGGAGGAAGGCGCGGCGGAGTGGA +
Preference number: 5 (lower is better)
Translates to: RGREGTVRDLGERSR*GERTETGRKARRSG
Trigger: TCCACTCCGCCGCGCCTTCCTCCCAGTTTCCGTCCGCTCGCCGCACCGGCTTCGTTCCCCCAAATCTCGGACCGTCCCTTCGCGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GTAGCGAAATGCAGGAGGCATGACTACGTCCTGATGGGACTTACATGGCCACCCGGGACGGTCCGAGATTaGGGGGAACGAAGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: VAKCRRHDYVLMGLTWPPGTVRD*GERSRC
Trigger: GCACCGGCTTCGTTCCCCCAAATCTCGGACCGTCCC...GGGTGGCCATGTAAGTCCCATCAGGACGTAGTCATGCCTCCTGCATTTCGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GAGAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTCCCAGAACCCGGCTGTaGGGCTGGGCTACCCCAGGA +
Preference number: 5 (lower is better)
Translates to: ERPTVMPGWSVRINHNTFPRTRL*GWATPG
Trigger: TCCTGGGGTAGCCCAGCCCAACAGCCGGGTTCTGGG...AAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGGGAGATTTCCCGCTCTaGCCACCCTCTGGATTGAGC +
Preference number: 5 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVGDFPL*PPSGLS
Trigger: GCTCAATCCAGAGGGTGGCAAGAGCGGGAAATCTCC...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GTGTCCATAACTATACATCACTTTCCTGCCCAACCAGGGCCTGAAACGTTGAATAGAGATGCTTTCTTCTaGGCAGCTCGGCTTCGGCTC +
Preference number: 5 (lower is better)
Translates to: VSITIHHFPAQPGPETLNRDAFF*AARLRL
Trigger: GAGCCGAAGCCGAGCTGCCAAGAAGAAAGCATCTCT...ATTCAACGTTTCAGGCCCTGGTTGGGCAGGAAAGTGATGTATAGTTATGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTCTGGAGGTGGCCGAGTaGGACTGGCTAAACTCCGGC +
Preference number: 5 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFLEVAE*DWLNSG
Trigger: GCCGGAGTTTAGCCAGTCCAACTCGGCCACCTCCAG...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACTGTGAGAGCCAGGGCTaGCAGGCCATTTGGAAAACT +
Preference number: 5 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNCESQG*QAIWKT
Trigger: AGTTTTCCAAATGGCCTGCAAGCCCTGGCTCTCACA...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTACTGTGTGGGAAGCTTaGGTTGGGCAACACATTGTC +
Preference number: 5 (lower is better)
Translates to: EANCNARLVCSHKPQYIFTVWEA*VGQHIV
Trigger: GACAATGTGTTGCCCAACCAAAGCTTCCCACACAGT...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACTTGGGGCTGGGGTTATaGGTAGCATATATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNLGLGL*VAYIQQ
Trigger: CTGCTGGATATATGCTACCAATAACCCCAGCCCCAA...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGTGCACACGAATGAACTaGCTGTGTAGGGACAGATTA +
Preference number: 5 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVCTRMN*LCRDRL
Trigger: TAATCTGTCCCTACACAGCAAGTTCATTCGTGTGCA...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp ATGGTGAAGTGGATCAAAATCCCTCGTTTGACAAAGGACCATTGCTTTAGATGCCATAACCTGCACACATaGGGCAAACATCCTGTACAG +
Preference number: 5 (lower is better)
Translates to: MVKWIKIPRLTKDHCFRCHNLHT*GKHPVQ
Trigger: CTGTACAGGATGTTTGCCCAATGTGTGCAGGTTATG...GCATCTAAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGATCCACTTCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGATATGAGGGGAAACTTTaGCTAAAGCTCAACTCAAAA +
Preference number: 5 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRYEGKL*LKLNSK
Trigger: TTTTGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATA...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp CAACACACAATGGGGGCTTGGGAGAGGTATAATTACCCAGACTCAGGAGGAAGAATCCTTATCCTCTTCTaGGGATGTTCCATTGATTTA +
Preference number: 5 (lower is better)
Translates to: QHTMGAWERYNYPDSGGRILILF*GCSIDL
Trigger: TAAATCAATGGAACATCCCAAGAAGAGGATAAGGAT...TCTTCCTCCTGAGTCTGGGTAATTATACCTCTCCCAAGCCCCCATTGTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp TGTGTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACTCCATGTTTTCGGGATaGCTTATCTCAGACAGACTG +
Preference number: 5 (lower is better)
Translates to: CVCKYINIRHFSEYRNKNSMFSG*LISDRL
Trigger: CAGTCTGTCTGAGATAAGCAATCCCGAAAACATGGA...GTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GAGGCCAACTGTAATGCCAGGTTGGTCTGTTCGCATAAACCACAATACATTTTTAGGGCTCATGCTGGATaGGCCATATGTATATTTTTG +
Preference number: 5 (lower is better)
Translates to: EANCNARLVCSHKPQYIFRAHAG*AICIFL
Trigger: CAAAAATATACATATGGCCAATCCAGCATGAGCCCT...AAAAATGTATTGTGGTTTATGCGAACAGACCAACCTGGCATTACAGTTGGCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp GTCTGTAAGTACATCAACATCAGGCACTTCTCAGAGTATCGGAACAAGAACGTGGGTGATGAGAGAAGGTaGAGATTATCCAAAAGATTT +
Preference number: 5 (lower is better)
Translates to: VCKYINIRHFSEYRNKNVGDERR*RLSKRF
Trigger: AAATCTTTTGGATAATCTCAACCTTCTCTCATCACC...CACGTTCTTGTTCCGATACTCTGAGAAGTGCCTGATGTTGATGTACTTACAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCAAATTCAAACTGGTGTTaGGTGGCGCAAACGAGTAGC +
Preference number: 5 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSNSNWC*VAQTSS
Trigger: GCTACTCGTTTGCGCCACCAAACACCAGTTTGAATT...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp AGATGCAGAATGGAGATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGTATGGTGTAGTGAGTTaGGCACTTCATTGTAATGAA +
Preference number: 5 (lower is better)
Translates to: RCRMEIQFFVIRQFRRKQYGVVS*ALHCNE
Trigger: TTCATTACAATGAAGTGCCAAACTCACTACACCATA...CTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAATCTCCATTCTGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTTCTTGGGATGTTCCATaGATTTACTGCTCACTGGGA +
Preference number: 5 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFSWDVP*IYCSLG
Trigger: TCCCAGTGAGCAGTAAATCAATGGAACATCCCAAGA...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACAACTGTAATGCCAGGTaGGTCTGTTCGCATAAACCA +
Preference number: 5 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNNCNAR*VCSHKP
Trigger: TGGTTTATGCGAACAGACCAACCTGGCATTACAGTT...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACACAGGAAAAATGTCTTaGCTGCCAAGTCTGACGAAA +
Preference number: 5 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNTGKMS*LPSLTK
Trigger: TTTCGTCAGACTTGGCAGCAAAGACATTTTTCCTGT...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp CCATTGATTTACTGCTCACTGGGATACATGTGCTCATTTAGACTTTGTCAGTTTGCTTATATACAAAACTaGAAAGCACACCAGGATCTG +
Preference number: 5 (lower is better)
Translates to: PLIYCSLGYMCSFRLCQFAYIQN*KAHQDL
Trigger: CAGATCCTGGTGTGCTTTCAAGTTTTGTATATAAGC...AAACTGACAAAGTCTAAATGAGCACATGTATCCCAGTGAGCAGTAAATCAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp ATTCAGTTCTTTGTGATCCGTCAGTTCCGCAGAAAACAGGTAGTACAAACAAAAATCAAAATCCCTCGTTaGACAAAGGACCATTGCTTT +
Preference number: 5 (lower is better)
Translates to: IQFFVIRQFRRKQVVQTKIKIPR*TKDHCF
Trigger: AAAGCAATGGTCCTTTGTCAAACGAGGGATTTTGAT...TTTTGTTTGTACTACCTGTTTTCTGCGGAACTGACGGATCACAAAGAACTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp TGGACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTGGTTGGGCAACACATaGTCAAAGTTAAAATCCAAT +
Preference number: 5 (lower is better)
Translates to: WTETRAKNYEGKLLLKLNWLGNT*SKLKSN
Trigger: ATTGGATTTTAACTTTGACAATGTGTTGCCCAACCA...GTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS-3UTR CAA 90 bp ACTGAAACAAGAGCAAAGAATTATGAGGGGAAACTTTTGCTAAAGCTCAACTCATATATTTTTGGTAGTTaGGGCTGGGTGAATTCAAAC +
Preference number: 5 (lower is better)
Translates to: TETRAKNYEGKLLLKLNSYIFGS*GWVNSN
Trigger: GTTTGAATTCACCCAGCCCAAACTACCAAAAATATA...TGAGTTGAGCTTTAGCAAAAGTTTCCCCTCATAATTCTTTGCTCTTGTTTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS CCA 72 bp TCCACATCGAGGCTCCTCGGGGTCCGCCGCACGGACTaGACGGCCGGCCAGAGCCGCCGGGCCGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: STSRLLGVRRTD*TAGQSRRAGAE
Trigger: CTCTGCCCCGGCCCGGCGGCTCTGGCCGGCCGTCCAGTCCGTGCGGCGGACCCCGAGGAGCCTCGATGTGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS GCA 72 bp GGCCGCTTGCTCTCCCCAGCGGCGCGCCCGCTGCGCTaGTGCCTGTTGAATGTGGCGGCTGCGGCAGCGGCT +
Preference number: 6 (lower is better)
Translates to: GRLLSPAARPLR*CLLNVAAAAAA
Trigger: AGCCGCTGCCGCAGCCGCCACATTCAACAGGCAGCAGCGCAGCGGGCGCGCCGCTGGGGAGAGCAAGCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS CAA 72 bp GCGCTGCCCGACGGCGCCGGGCTGGAGGTGGCCGAGTaGGACTGGCTAAACTCCGGCCTGGGCAGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: ALPDGAGLEVAE*DWLNSGLGSGQ
Trigger: CTGGCCGCTGCCCAGGCCGGAGTTTAGCCAGTCCAACTCGGCCACCTCCAGCCCGGCGCCGTCGGGCAGCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS GCA 72 bp CGCTTGCTCTCCCCAGCGGCGCGCCCGCTGCGCTGCTaGCTGTTGAATGTGGCGGCTGCGGCAGCGGCTGCT +
Preference number: 6 (lower is better)
Translates to: RLLSPAARPLRC*LLNVAAAAAAA
Trigger: AGCAGCCGCTGCCGCAGCCGCCACATTCAACAGGCAGCAGCGCAGCGGGCGCGCCGCTGGGGAGAGCAAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS GCA 72 bp GAAGGGACGGTCCGAGATTTGGGGGAACGAAGCCGGTaGGGCGAGCGGACGGAAACTGGGAGGAAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: EGTVRDLGERSR*GERTETGRKAR
Trigger: CCGCGCCTTCCTCCCAGTTTCCGTCCGCTCGCCGCACCGGCTTCGTTCCCCCAAATCTCGGACCGTCCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS CAA 90 bp CTGTCCCCAGCACCCTCCTGGCCAGACTGGAGAGATGCTTTCTTCTaGGCAGCTCGGCTTCGGCTCTTAGCAAATTTACTGTTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: LSPAPSWPDWRDAFF*AARLRLLANLLLLS
Trigger: GGACAACAACAGTAAATTTGCTAAGAGCCGAAGCCGAGCTGCCAAGAAGAAAGCATCTCTCCAGTCTGGCCAGGAGGGTGCTGGGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS CAA 72 bp GCACCCTCCTGGCCAGACTGGAGAGATGCTTTCTTCTaGGCAGCTCGGCTTCGGCTCTTAGCAAATTTACTG +
Preference number: 6 (lower is better)
Translates to: APSWPDWRDAFF*AARLRLLANLL
Trigger: CAGTAAATTTGCTAAGAGCCGAAGCCGAGCTGCCAAGAAGAAAGCATCTCTCCAGTCTGGCCAGGAGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6
CDS CAA 72 bp TTTGGTAGTTTGGGCTGGGTGAATTCAAACTGGTGTTaGGTGGCGCAAACGAGTAGCACGGCGTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: FGSLGWVNSNWC*VAQTSSTASAA
Trigger: TGCAGCAGACGCCGTGCTACTCGTTTGCGCCACCAAACACCAGTTTGAATTCACCCAGCCCAAACTACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379561.6