RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000111206

Ensembl transcript IDs: ENST00000342628.6, ENST00000359843.8, ENST00000361953.7, ENST00000366362.3, ENST00000535350.1, ENST00000536066.1, ENST00000537018.5, ENST00000538564.5, ENST00000545049.1, ENST00000627656.2

Found 879 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTGCCTGCTGTCCTCACTCAGAGGCTTGGGGTGCACTGAGCCTTaGAGTGCCCGGGATGGTGGACAGCTTGAGCACAGGGGCAAGGGC +
Preference number: 1 (lower is better)
Translates to: PCLLSSLRGLGCTEP*SARDGGQLEHRGKG
Trigger: GCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 90 bp GAGCAGAACAGTCCCTGCCTGCTGTCCTCACTCAGAGGCTTGGGGTaGACTGAGCCTTGGAGTGCCCGGGATGGTGGACAGCTTGAGCAC +
Preference number: 1 (lower is better)
Translates to: EQNSPCLLSSLRGLG*TEPWSARDGGQLEH
Trigger: GTGCTCAAGCTGTCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 90 bp ATGAGGAGCAGAACAGTCCCTGCCTGCTGTCCTCACTCAGAGGCTTaGGGTGCACTGAGCCTTGGAGTGCCCGGGATGGTGGACAGCTTG +
Preference number: 1 (lower is better)
Translates to: MRSRTVPACCPHSEA*GALSLGVPGMVDSL
Trigger: CAAGCTGTCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 90 bp GTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTaGCTCTTTGCAAAGCTGAGGGGCAAGCTAAGGAAGCCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: VLKLAHTHAVSWGLG*LFAKLRGKLRKPGR
Trigger: CCTGCCTGGCTTCCTTAGCTTGCCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR TCA 90 bp GCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCT +
Preference number: 1 (lower is better)
Translates to: AVASSSAVRPGGVRF*WSCSGGALDSVVSA
Trigger: AGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR GCA 90 bp ATAATCAGGCAGCAGGGAGCTATGAGGAGCAGAACAGTCCCTGCCTaGTGTCCTCACTCAGAGGCTTGGGGTGCACTGAGCCTTGGAGTG +
Preference number: 1 (lower is better)
Translates to: IIRQQGAMRSRTVPA*CPHSEAWGALSLGV
Trigger: CACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTCCTCATAGCTCCCTGCTGCCTGATTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 90 bp TTGCATAATCAGGCAGCAGGGAGCTATGAGGAGCAGAACAGTCCCTaGCTGCTGTCCTCACTCAGAGGCTTGGGGTGCACTGAGCCTTGG +
Preference number: 1 (lower is better)
Translates to: LHNQAAGSYEEQNSP*LLSSLRGLGCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTCCTCATAGCTCCCTGCTGCCTGATTATGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 90 bp GGCAGGGAGGGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTaGGTCCCTGCAGTGAAGAACCCAAGATCCAGGTACCTCAGCCTG +
Preference number: 1 (lower is better)
Translates to: GREGQKGLWQADPLV*VPAVKNPRSRYLSL
Trigger: CAGGCTGAGGTACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCCCTCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 90 bp TCAAGTAGCGGTTGGCACTGGGGTGAATGGTCCAGAAGGAGACCTTaGCATTGGCAGACGTCTCCCGGACAAACATGTCGTGCAGGGAAA +
Preference number: 1 (lower is better)
Translates to: SSSGWHWGEWSRRRP*HWQTSPGQTCRAGK
Trigger: TTTCCCTGCACGACATGTTTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGACCATTCACCCCAGTGCCAACCGCTACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR GCA 90 bp GGGAACACAAGGTCCCAGCAGTGGCTAGGGTGTGACTGCTACTTTTaGATAATCAGGCAGCAGGGAGCTATGAGGAGCAGAACAGTCCCT +
Preference number: 1 (lower is better)
Translates to: GNTRSQQWLGCDCYF*IIRQQGAMRSRTVP
Trigger: AGGGACTGTTCTGCTCCTCATAGCTCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGTGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 90 bp GCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTGCTTAAACACCTGGTCCAATGTCAA +
Preference number: 1 (lower is better)
Translates to: AQGEFGFDGHVPAEL*IRSFLLLKHLVQCQ
Trigger: TTGACATTGGACCAGGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR TCA 90 bp AAAAAGGACTCTGGCAAGCAGATCCACTTGTCTGGGTCCCTGCAGTaGAGAACCCAAGATCCAGGTACCTCAGCCTGGAAGAAACCGTGC +
Preference number: 1 (lower is better)
Translates to: KKDSGKQIHLSGSLQ*RTQDPGTSAWKKPC
Trigger: GCACGGTTTCTTCCAGGCTGAGGTACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 90 bp GGGGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATaGCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAAACATC +
Preference number: 1 (lower is better)
Translates to: GALSAFSSLHLSSRQ*QSPWYDWGHYQRNI
Trigger: GATGTTTCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR TCA 90 bp TCAGATACTCTTGGGGAACACAAGGTCCCAGCAGTGGCTAGGGTGTaGCTGCTACTTTTGCATAATCAGGCAGCAGGGAGCTATGAGGAG +
Preference number: 1 (lower is better)
Translates to: SDTLGEHKVPAVARV*LLLLHNQAAGSYEE
Trigger: CTCCTCATAGCTCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGTGTTCCCCAAGAGTATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 90 bp ATACTCTTGGGGAACACAAGGTCCCAGCAGTGGCTAGGGTGTGACTaGTACTTTTGCATAATCAGGCAGCAGGGAGCTATGAGGAGCAGA +
Preference number: 1 (lower is better)
Translates to: ILLGNTRSQQWLGCD*YFCIIRQQGAMRSR
Trigger: TCTGCTCCTCATAGCTCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGTGTTCCCCAAGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 90 bp CAGCAGAGGAATCAGATACTCTTGGGGAACACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTACTTTTGCATAATCAGGCAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: QQRNQILLGNTRSQQ*LGCDCYFCIIRQQG
Trigger: TCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCCTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 90 bp AAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTaGATCCATCCTCCCACCCCAAATTCAACTCCTGACCCAATACAA +
Preference number: 1 (lower is better)
Translates to: KHLIAHIWAPTLCFS*IHPPTPNSTPDPIQ
Trigger: TTGTATTGGGTCAGGAGTTGAATTTGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 90 bp TTATCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTaGTTCAGTTGCATCCATCCTCCCACCCCAAATTCAACTCCTGAC +
Preference number: 1 (lower is better)
Translates to: LSEKHLIAHIWAPTL*FSCIHPPTPNSTPD
Trigger: GTCAGGAGTTGAATTTGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR TCA 90 bp ACGTATAGATGTCTTTCAAAGTCATGCGCTTCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGGCCATGTAAGAGTAGGGTGGCCGCT +
Preference number: 1 (lower is better)
Translates to: TYRCLSKSCASSQCC*WRIVSWPCKSRVAA
Trigger: AGCGGCCACCCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACATCTATACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGGGTGCACTGAGCCTTaGAGTGCCCGGGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGGCTEP*SARDGG
Trigger: TCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGGGTGCACTGAGCCTTaGAGTGCCCGGGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPGCTEP*SARDGG
Trigger: TCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: LTRGSSGFIFRRAPRGSSVPAEL*IRSFLL
Trigger: CAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAAC...CGAACTCCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGGATGGTGGACAGCTTaGGCACAGGGGCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALGWWTA*AQGQGQ
Trigger: CTGCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAGGCTTGGGGTGCACTaGGCCTTGGAGTGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWRLGVH*ALECPG
Trigger: TCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TATGAGCTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGCGGACAAACATGTCGTaGAGGGAAAGGTTGTGGCGG +
Preference number: 2 (lower is better)
Translates to: YELTRGSSGFIFRRAPRGRTNMS*RERLWR
Trigger: CCGCCACAACCTTTCCCTGCACGACATGTTTGTCCG...CCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAGCTCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCCACCCTTCAGCTCCTaGCAGGGACAGCAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAPPFSS*QGQQRN
Trigger: ATTCCTCTGCTGTCCCTGCCAGGAGCTGAAGGGTGG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCACCCTTCAGCTCCTaGCAGGGACAGCAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPPFSS*QGQQRN
Trigger: ATTCCTCTGCTGTCCCTGCCAGGAGCTGAAGGGTGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CAA 90 bp TATGAGGAGCAGAACAGTCCCTGCCTGCTGTCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGGAGTGCCCGGGATGGTGGACAGCTT +
Preference number: 2 (lower is better)
Translates to: YEEQNSPCLLSSLRG*GCTEPWSARDGGQL
Trigger: AAGCTGTCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTCCTCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CAA 90 bp AGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTaGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: SSGFIFRRAPRGSSV*MVMFRRSSGFGRFC
Trigger: GCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCTGGGTCCCTGCAGTaGAGAACCCAAGATCCAGGT +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASGSLQ*RTQDPG
Trigger: ACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGCAGAACAGTCCCTaGCTGCTGTCCTCACTCAGA +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAEQNSP*LLSSLR
Trigger: TCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGGGTGCACTGAGCCTTaGAGTGCCCGGGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWGCTEP*SARDGG
Trigger: TCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTAC +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPTRSQQ*LGCDCY
Trigger: GTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGCAGGAAAGCTGACTTaGAAACACGGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPAGKLT*KHGEVA
Trigger: TGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTGC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGCAGGAAAGCTGACTTaGAAACACGGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGAGKLT*KHGEVA
Trigger: TGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTGC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGGATGGTGGACAGCTTaGGCACAGGGGCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVGWWTA*AQGQGQ
Trigger: CTGCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTTCTTGCAGGAAAGCTaGCTTGGAAACACGGGGAGG +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAFLQES*LGNTGR
Trigger: CCTCCCCGTGTTTCCAAGTCAGCTTTCCTGCAAGAA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTTCTTGCAGGAAAGCTaGCTTGGAAACACGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPFLQES*LGNTGR
Trigger: CCTCCCCGTGTTTCCAAGTCAGCTTTCCTGCAAGAA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTGGGCACCCACACTCTaGTTCAGTTGCATCCATCCT +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAWAPTL*FSCIHP
Trigger: AGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTAC +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALTRSQQ*LGCDCY
Trigger: GTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCAGATCCACTTGTCTaGGTCCCTGCAGTGAAGAAC +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAADPLV*VPAVKN
Trigger: GTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCTAATAGCGCACATCTaGGCACCCACACTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALIAHI*APTLCF
Trigger: GAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCTAATAGCGCACATCTaGGCACCCACACTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPLIAHI*APTLCF
Trigger: GAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCTAATAGCGCACATCTaGGCACCCACACTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGLIAHI*APTLCF
Trigger: GAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTCTGGGTCCCTGCAGTaGAGAACCCAAGATCCAGGT +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSSGSLQ*RTQDPG
Trigger: ACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCTCAAGCCTCCACCTaGGTTCTCGTCAATGCCAGT +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSQAST*VLVNAS
Trigger: ACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTACTTGTCTGGGTCCCTaGAGTGAAGAACCCAAGATC +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKATCLGP*SEEPKI
Trigger: GATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGGGCACCCACACTCTaGTTCAGTTGCATCCATCCT +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALWAPTL*FSCIHP
Trigger: AGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGATGTCAAGTAGCGGTTaGCACTGGGGTGAATGGTCC +
Preference number: 2 (lower is better)
Translates to: AQGEFGFDGHVPAELWIRMSSSG*HWGEWS
Trigger: GGACCATTCACCCCAGTGCCAACCGCTACTTGACAT...CCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGGAACAGAAGTCAATTaGAACCCCAGGTCATCCTAC +
Preference number: 2 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGGTEVN*NPRSSY
Trigger: GTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTTCTTGCAGGAAAGCTaGCTTGGAAACACGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSFLQES*LGNTGR
Trigger: CCTCCCCGTGTTTCCAAGTCAGCTTTCCTGCAAGAA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCCAGTCTCCCTGGTATaGTTGGGGACATTATCAGAG +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALPVSLV*LGTLSE
Trigger: CTCTGATAATGTCCCCAATCATACCAGGGAGACTGG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGCCTGGAAGAAACCGTaGACTGCAGGTCTTCCCTTC +
Preference number: 2 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWAWKKP*TAGLPF
Trigger: GAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCACACTCTGCTTCAGTTaGATCCATCCTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSTLCFS*IHPPTP
Trigger: TGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACCTCACTCAGAGGCTTaGGGTGCACTGAGCCTTGGA +
Preference number: 2 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVPHSEA*GALSLG
Trigger: TCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTAAGGTAAGAGACTGCTaGGCAGAGAATGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAKVRDC*AENGNR
Trigger: CCTGTTTCCATTCTCTGCCCAGCAGTCTCTTACCTT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGAAGGTAAGAGACTGCTaGGCAGAGAATGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGKVRDC*AENGNR
Trigger: CCTGTTTCCATTCTCTGCCCAGCAGTCTCTTACCTT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCCAGGTACCTCAGCCTaGAAGAAACCGTGCACTGCA +
Preference number: 2 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWPGTSA*KKPCTA
Trigger: TGCAGTGCACGGTTTCTTCCAGGCTGAGGTACCTGG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp TTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACCGGTTGGCACTGGGGTaGATGGTCCAGAAGGAGACC +
Preference number: 2 (lower is better)
Translates to: LMVMFRRSSGFGRFCCLNRLALG*MVQKET
Trigger: GGTCTCCTTCTGGACCATTCACCCCAGTGCCAACCG...GTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGAGCAGAACAGTCCCTaGCTGCTGTCCTCACTCAGA +
Preference number: 2 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVEQNSP*LLSSLR
Trigger: TCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGAAGAAACCGTGCACTaGAGGTCTTCCCTTCTATCA +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALEETVH*RSSLLS
Trigger: TGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCACTTGTCTGGGTCCCTaGAGTGAAGAACCCAAGATC +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSTCLGP*SEEPKI
Trigger: GATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGACACTCTGCTTCAGTTaGATCCATCCTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWTLCFS*IHPPTP
Trigger: TGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GGAGACCTTGCCATTGGCAGACGTCTCCCGGACAAACATGTCGTGCAGGGAAAGTCAGACACAGAGTTCTaGCAGGACGCTGATGGTCTC +
Preference number: 2 (lower is better)
Translates to: GDLAIGRRLPDKHVVQGKSDTEF*QDADGL
Trigger: GAGACCATCAGCGTCCTGGCAGAACTCTGTGTCTGA...CTTTCCCTGCACGACATGTTTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR GCA 90 bp GTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACACCTGGTCCAGAAGGAGACCTTaGCATTGGCAGACGTCTCCC +
Preference number: 2 (lower is better)
Translates to: VMFRRSSGFGRFCCLNTWSRRRP*HWQTSP
Trigger: GGGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGA...CCAGGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTATCCTACCCACCTTCTaGCAGTCTCTGGATAATGAT +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPILPTF*QSLDND
Trigger: ATCATTATCCAGAGACTGCCAGAAGGTGGGTAGGAT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACCAGGTACCTCAGCCTaGAAGAAACCGTGCACTGCA +
Preference number: 2 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVPGTSA*KKPCTA
Trigger: TGCAGTGCACGGTTTCTTCCAGGCTGAGGTACCTGG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGCAGATCCACTTGTCTaGGTCCCTGCAGTGAAGAAC +
Preference number: 2 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWADPLV*VPAVKN
Trigger: GTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGTGGCGAATTGTATCATaGCCATGTAAGAGTAGGGTG +
Preference number: 2 (lower is better)
Translates to: HLPPCAQGEFGFDGHVPAWRIVS*PCKSRV
Trigger: CACCCTACTCTTACATGGCCATGATACAATTCGCCA...CGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGATGGTGGACAGCTTaGGCACAGGGGCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGWWTA*AQGQGQ
Trigger: CTGCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGGAACAGAAGTCAATTaGAACCCCAGGTCATCCTAC +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSGTEVN*NPRSSY
Trigger: GTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGTGACTGCTACTTTTaGATAATCAGGCAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALCDCYF*IIRQQG
Trigger: TCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGAAGAAACCGTGCACTaGAGGTCTTCCCTTCTATCA +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSEETVH*RSSLLS
Trigger: TGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GCGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTGGATTCTGTCTTTCAAAGTCATaGGCTTCCTCTCAGTGCTGT +
Preference number: 2 (lower is better)
Translates to: APRGSSVLMVMFRRSSGFCLSKS*ASSQCC
Trigger: ACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACA...GAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTAGAATGGAAACAGGCTaGGGGGTTCCTAATCTCTTT +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALRMETG*GVPNLF
Trigger: AAAGAGATTAGGAACCCCCCAGCCTGTTTCCATTCT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCAAGGTAAGAGACTGCTaGGCAGAGAATGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSKVRDC*AENGNR
Trigger: CCTGTTTCCATTCTCTGCCCAGCAGTCTCTTACCTT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCTCCCTGGTATGATTaGGGACATTATCAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASPWYD*GHYQRN
Trigger: GTTTCTCTGATAATGTCCCCAATCATACCAGGGAGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGGATGGTGGACAGCTTaGGCACAGGGGCAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKGWWTA*AQGQGQ
Trigger: CTGCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCCCAAATTCAACTCCTaGCCCAATACAAAAGACTTT +
Preference number: 2 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPPKFNS*PNTKDF
Trigger: AAAGTCTTTTGTATTGGGTCAGGAGTTGAATTTGGG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAACTTGTCTGGGTCCCTaGAGTGAAGAACCCAAGATC +
Preference number: 2 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVTCLGP*SEEPKI
Trigger: GATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGGGTGCACTGAGCCTTaGAGTGCCCGGGATGGTGGA +
Preference number: 2 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKGCTEP*SARDGG
Trigger: TCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCCAGAAGGAGACCTTGCCATTGGCAGACGTCTCCCGGACAAACATGTCGTGCACATGTAAGAGTAGGGTaGCCGCTCAGACACAGAGTT +
Preference number: 2 (lower is better)
Translates to: SRRRPCHWQTSPGQTCRAHVRVG*PLRHRV
Trigger: AACTCTGTGTCTGAGCGGCCACCCTACTCTTACATG...TGCACGACATGTTTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTCAGAGGCTTGGGGTaGACTGAGCCTTGGAGTGCC +
Preference number: 2 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLRGLG*TEPWSA
Trigger: GGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTAC +
Preference number: 2 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCTRSQQ*LGCDCY
Trigger: GTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACCACCCTTCAGCTCCTaGCAGGGACAGCAGAGGAAT +
Preference number: 2 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRPPFSS*QGQQRN
Trigger: ATTCCTCTGCTGTCCCTGCCAGGAGCTGAAGGGTGG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGATCCTACCCACCTTCTaGCAGTCTCTGGATAATGAT +
Preference number: 2 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWILPTF*QSLDND
Trigger: ATCATTATCCAGAGACTGCCAGAAGGTGGGTAGGAT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCTGGGTCCCTGCAGTaGAGAACCCAAGATCCAGGT +
Preference number: 2 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSGSLQ*RTQDPG
Trigger: ACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCTCAGAGGCTTGGGGTaGACTGAGCCTTGGAGTGCC +
Preference number: 2 (lower is better)
Translates to: EETVHCRSSLLSKLKARNLRGLG*TEPWSA
Trigger: GGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGCAGGAAAGCTGACTTaGAAACACGGGGAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRAGKLT*KHGEVA
Trigger: TGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTGC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp ATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACACCGGAGTTCTTCCAGCCTaGCTTGGCAATGTGCTTAAA +
Preference number: 2 (lower is better)
Translates to: MVMFRRSSGFGRFCCLNTGVLPA*LGNVLK
Trigger: TTTAAGCACATTGCCAAGCCAGGCTGGAAGAACTCC...GGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR CAA 90 bp GTCTTTCAAAGTCATGCGCTTCCTCTCAGTGCTGTTGATGGCGAATaGTATCATGGCCATGTAAGAGTAGGGTGGCCGCTCAGACACAGA +
Preference number: 2 (lower is better)
Translates to: VFQSHALPLSAVDGE*YHGHVRVGWPLRHR
Trigger: TCTGTGTCTGAGCGGCCACCCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGGAAGCGCATGACTTTGAAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR TCA 90 bp TTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACTCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGG +
Preference number: 2 (lower is better)
Translates to: LMVMFRRSSGFGRFCCLNSSQCC*WRIVSW
Trigger: CCATGATACAATTCGCCATCAACAGCACTGAGAGGA...GTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAGCAGAACAGTCCCTaGCTGCTGTCCTCACTCAGA +
Preference number: 2 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKEQNSP*LLSSLR
Trigger: TCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTAC +
Preference number: 2 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLTRSQQ*LGCDCY
Trigger: GTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGGAACAGAAGTCAATTaGAACCCCAGGTCATCCTAC +
Preference number: 2 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCGTEVN*NPRSSY
Trigger: GTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGAAGAAACCGTGCACTaGAGGTCTTCCCTTCTATCA +
Preference number: 2 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCEETVH*RSSLLS
Trigger: TGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCATCCTACCCACCTTCTaGCAGTCTCTGGATAATGAT +
Preference number: 2 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCILPTF*QSLDND
Trigger: ATCATTATCCAGAGACTGCCAGAAGGTGGGTAGGAT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATGTGACTGCTACTTTTaGATAATCAGGCAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRCDCYF*IIRQQG
Trigger: TCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAAGAATGGAAACAGGCTaGGGGGTTCCTAATCTCTTT +
Preference number: 2 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRRMETG*GVPNLF
Trigger: AAAGAGATTAGGAACCCCCCAGCCTGTTTCCATTCT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTGTGACTGCTACTTTTaGATAATCAGGCAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLCDCYF*IIRQQG
Trigger: TCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGAGAATGGAAACAGGCTaGGGGGTTCCTAATCTCTTT +
Preference number: 2 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKRMETG*GVPNLF
Trigger: AAAGAGATTAGGAACCCCCCAGCCTGTTTCCATTCT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAAGGTAAGAGACTGCTaGGCAGAGAATGGAAACAGG +
Preference number: 2 (lower is better)
Translates to: EETVHCRSSLLSKLKARNKVRDC*AENGNR
Trigger: CCTGTTTCCATTCTCTGCCCAGCAGTCTCTTACCTT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTGTGACTGCTACTTTTaGATAATCAGGCAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: EETVHCRSSLLSKLKARNCDCYF*IIRQQG
Trigger: TCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAGAATGGAAACAGGCTaGGGGGTTCCTAATCTCTTT +
Preference number: 2 (lower is better)
Translates to: EETVHCRSSLLSKLKARNRMETG*GVPNLF
Trigger: AAAGAGATTAGGAACCCCCCAGCCTGTTTCCATTCT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACATCCTACCCACCTTCTaGCAGTCTCTGGATAATGAT +
Preference number: 2 (lower is better)
Translates to: EETVHCRSSLLSKLKARNILPTF*QSLDND
Trigger: ATCATTATCCAGAGACTGCCAGAAGGTGGGTAGGAT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSSLRG*GCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCGTCCAGAAGGAGACCTaGCCATTGGCAGACGTCTCC +
Preference number: 3 (lower is better)
Translates to: FRRAPRGSSVLMVMFRRSVQKET*PLADVS
Trigger: GGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGAC...GCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR GCA 72 bp CACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTaGAAAGCTGAGGGGCAAGCTAAGGAAGCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: HPCGQLGPRVAL*KAEGQAKEARQ
Trigger: CTGCCTGGCTTCCTTAGCTTGCCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 72 bp CTGTCCTCACTCAGAGGCTTGGGGTGCACTGAGCCTTaGAGTGCCCGGGATGGTGGACAGCTTGAGCACAGG +
Preference number: 3 (lower is better)
Translates to: LSSLRGLGCTEP*SARDGGQLEHR
Trigger: CCTGTGCTCAAGCTGTCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 72 bp AGAACAGTCCCTGCCTGCTGTCCTCACTCAGAGGCTTaGGGTGCACTGAGCCTTGGAGTGCCCGGGATGGTG +
Preference number: 3 (lower is better)
Translates to: RTVPACCPHSEA*GALSLGVPGMV
Trigger: CACCATCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGGACTGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR TCA 72 bp TCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGAGCTCTGGATTCGGTC +
Preference number: 3 (lower is better)
Translates to: SSSAVRPGGVRF*WSCSGGALDSV
Trigger: GACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR CCA 72 bp CTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTaGCTCTTTGCAAAGCTGAGGGGCAAGCTAAGGAAG +
Preference number: 3 (lower is better)
Translates to: LAHTHAVSWGLG*LFAKLRGKLRK
Trigger: CTTCCTTAGCTTGCCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 72 bp AGTGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTaGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGC +
Preference number: 3 (lower is better)
Translates to: SVLKLAHTHAVS*GLGWLFAKLRG
Trigger: GCCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCACACTCTGCTTCAGTaGCATCCATCCTCCCACCCC +
Preference number: 3 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALHTLLQ*HPSSHP
Trigger: GGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTCACCATTGCCTTTGTaGTTCCCACCCTTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSPLPL*FPPFSS
Trigger: GGAGCTGAAGGGTGGGAACAACAAAGGCAATGGTGA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSSLRG*GCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp CTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGCTGTTGATGGCGAATaGTATCATGGCCATGTAAGA +
Preference number: 3 (lower is better)
Translates to: LTRGSSGFIFRRAPRGSSAVDGE*YHGHVR
Trigger: TCTTACATGGCCATGATACAATTCGCCATCAACAGC...CGAACTCCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTAGGAATCAGATACTCTaGGGGAACACAAGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALRNQIL*GNTRSQ
Trigger: CTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCCT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACACACTCTGCTTCAGTaGCATCCATCCTCCCACCCC +
Preference number: 3 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVHTLLQ*HPSSHP
Trigger: GGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TATGAGCTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGTTCCTCTCAGTGCTGTaGATGGCGAATTGTATCATG +
Preference number: 3 (lower is better)
Translates to: YELTRGSSGFIFRRAPRGFLSVL*MANCIM
Trigger: CATGATACAATTCGCCATCAACAGCACTGAGAGGAA...CCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAGCTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 3 (lower is better)
Translates to: AGSHPCGQLGPRVALCKANLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGAGGAACAGAAGTCAATaGAAACCCCAGGTCATCCTA +
Preference number: 3 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGRNRSQ*KPQVIL
Trigger: TAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp ATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACACCAAGGAGACCTTGCCATaGGCAGACGTCTCCCGGACA +
Preference number: 3 (lower is better)
Translates to: MVMFRRSSGFGRFCCLNTKETLP*ADVSRT
Trigger: TGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCTT...GGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR TCA 72 bp CTTGGGGAACACAAGGTCCCAGCAGTGGCTAGGGTGTaGCTGCTACTTTTGCATAATCAGGCAGCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: LGEHKVPAVARV*LLLLHNQAAGS
Trigger: GCTCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGTGTTCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR TCA 72 bp TCTGGCAAGCAGATCCACTTGTCTGGGTCCCTGCAGTaGAGAACCCAAGATCCAGGTACCTCAGCCTGGAAG +
Preference number: 3 (lower is better)
Translates to: SGKQIHLSGSLQ*RTQDPGTSAWK
Trigger: CTTCCAGGCTGAGGTACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGCTTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 72 bp GGGCAAAAAGGACTCTGGCAAGCAGATCCACTTGTCTaGGTCCCTGCAGTGAAGAACCCAAGATCCAGGTAC +
Preference number: 3 (lower is better)
Translates to: GQKGLWQADPLV*VPAVKNPRSRY
Trigger: GTACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGCTTGCCAGAGTCCTTTTTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSSLRG*GCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 3 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSNLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCAGGAACAGAAGTCAATaGAAACCCCAGGTCATCCTA +
Preference number: 3 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSRNRSQ*KPQVIL
Trigger: TAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 72 bp GAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTGCTTAAACACCTGGTC +
Preference number: 3 (lower is better)
Translates to: EFGFDGHVPAEL*IRSFLLLKHLV
Trigger: GACCAGGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLSSLRG*GCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTCACCATTGCCTTTGTaGTTCCCACCCTTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSPLPL*FPPFSS
Trigger: GGAGCTGAAGGGTGGGAACAACAAAGGCAATGGTGA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 72 bp AAACATCTAATAGCGCACATCTGGGCACCCACACTCTaGTTCAGTTGCATCCATCCTCCCACCCCAAATTCA +
Preference number: 3 (lower is better)
Translates to: KHLIAHIWAPTL*FSCIHPPTPNS
Trigger: TGAATTTGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR GCA 72 bp AGATCCAGGTACCTCAGCCTGGAAGAAACCGTGCACTaGAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGG +
Preference number: 3 (lower is better)
Translates to: RSRYLSLEETVH*RSSLLSKLKAR
Trigger: CCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGCTGAGGTACCTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 72 bp AATCAGATACTCTTGGGGAACACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTACTTTTGCATAATCAGG +
Preference number: 3 (lower is better)
Translates to: NQILLGNTRSQQ*LGCDCYFCIIR
Trigger: CCTGATTATGCAAAAGTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGTGTTCCCCAAGAGTATCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CCA 72 bp GGGACATTATCAGAGAAACATCTAATAGCGCACATCTaGGCACCCACACTCTGCTTCAGTTGCATCCATCCT +
Preference number: 3 (lower is better)
Translates to: GTLSEKHLIAHI*APTLCFSCIHP
Trigger: AGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGATAATGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTCACCATTGCCTTTGTaGTTCCCACCCTTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: EETVHCRSSLLSKLKARNSPLPL*FPPFSS
Trigger: GGAGCTGAAGGGTGGGAACAACAAAGGCAATGGTGA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGGAACAGAAGTCAATaGAAACCCCAGGTCATCCTA +
Preference number: 3 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRNRSQ*KPQVIL
Trigger: TAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 3 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLNLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR TCA 72 bp TGTCTTTCAAAGTCATGCGCTTCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGGCCATGTAAGAGTAGG +
Preference number: 3 (lower is better)
Translates to: CLSKSCASSQCC*WRIVSWPCKSR
Trigger: CCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
3UTR-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 3 (lower is better)
Translates to: EETVHCRSSLLSKLKARNNLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCGGAGTCCTGGAGGCTaGGTTGGGGCTCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGRSPGG*VGAPPQ
Trigger: CTGTGGGGGAGCCCCAACTCAGCCTCCAGGACTCCG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCGGAGTCCTGGAGGCTaGGTTGGGGCTCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPRSPGG*VGAPPQ
Trigger: CTGTGGGGGAGCCCCAACTCAGCCTCCAGGACTCCG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTAGGCTTGGGGTGCACTaGGCCTTGGAGTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPRLGVH*ALECPG
Trigger: TCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCAAGCTCTGAGCTCATaGGGGAAGCCGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGQALSS*GKPPGA
Trigger: TGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCAAGCTCTGAGCTCATaGGGGAAGCCGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAQALSS*GKPPGA
Trigger: TGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGATGGCGGGCAAGCTCTaGGCTCATGAGGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGMAGKL*AHEGSR
Trigger: GCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCAT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTAGTACTGGGCCCCTCTaGGAAGAGCAGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSTGPL*EEQLRL
Trigger: GAGCCGGAGCTGCTCTTCTCAGAGGGGCCCAGTACT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGGATGGTGGACAGCTTaGGCACAGGGGCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAGWWTA*AQGQGQ
Trigger: CTGCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp ACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTCCTGGAGGCTGAGTTaGGGCTCCCCCACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TRGSSGFIFRRAPRGSSVSWRLS*GSPTAD
Trigger: ATCAGCTGTGGGGGAGCCCCAACTCAGCCTCCAGGA...AACCGAACTCCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTTGAGGCCGGAGTCCTaGAGGCTGAGTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALRPES*RLSWGS
Trigger: GGAGCCCCAACTCAGCCTCCAGGACTCCGGCCTCAA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGTCAGAGGAGTCTGCTaGGAACGGGAGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGVRGVC*ERELCG
Trigger: GCCGCAGAGCTCCCGTTCCCAGCAGACTCCTCTGAC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGTTGTCAGGGCCCAGTaGGTCCTCGTCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALVVRAQ*VLVQAR
Trigger: CCTGGCCTGGACGAGGACCCACTGGGCCCTGACAAC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCCGGGGGTGGGGTCTaGCACCGGAGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAAGGGV*HRSFQF
Trigger: AAACTGAAAGCTCCGGTGCCAGACCCCACCCCCGGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359843.8
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCTCCATCTCTTGCTTaGTGCTGCGGGAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPPSLA*CCGSPV
Trigger: GACTGGGCTCCCGCAGCATCAAGCAAGAGATGGAGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGTTCTGCCAGGACGCTaGTGGTCTCGAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAVLPGR*WSRRLL
Trigger: GAGGAGCCTTCGAGACCATCAGCGTCCTGGCAGAAC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCGGTTGGCACTGGGGTaGATGGTCCAGAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKARLALG*MVQKET
Trigger: GGTCTCCTTCTGGACCATTCACCCCAGTGCCAACCG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGCGGTTGGCACTGGGGTaGATGGTCCAGAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: HLPPCAQGEFGFDGHVPARLALG*MVQKET
Trigger: GGTCTCCTTCTGGACCATTCACCCCAGTGCCAACCG...CGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCAAGCTCTGAGCTCATaGGGGAAGCCGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALQALSS*GKPPGA
Trigger: TGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGGGATGGCCACTACTTaGGTGTTGGGCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGGMATT*VLGMVG
Trigger: CCCCACCATGCCCAACACGCAAGTAGTGGCCATCCC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGGGATGGCCACTACTTaGGTGTTGGGCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPGMATT*VLGMVG
Trigger: CCCCACCATGCCCAACACGCAAGTAGTGGCCATCCC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGAGGGTCAGAGGAGTCTaGTGGGAACGGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGRVRGV*WERELC
Trigger: GCAGAGCTCCCGTTCCCAGCAGACTCCTCTGACCCT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCTCAGAGGCTTGGGGTaGACTGAGCCTTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGLRGLG*TEPWSA
Trigger: GGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCACCTTGGGGGCAATaGGGACTCGCTTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAAPWGQ*GLACYG
Trigger: GCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCCTGGAGGCTGAGTTaGGGCTCCCCCACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSWRLS*GSPTAD
Trigger: ATCAGCTGTGGGGGAGCCCCAACTCAGCCTCCAGGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTCCTGGAGGCTGAGTTaGGGCTCCCCCACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSWRLS*GSPTAD
Trigger: ATCAGCTGTGGGGGAGCCCCAACTCAGCCTCCAGGA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKARTRLL*RASSEL
Trigger: GAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCCCAGCGGGAAGTACTaGGCCCCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPPSGKY*APLRRA
Trigger: TGCTCTTCTCAGAGGGGCCCAGTACTTCCCGCTGGG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCCAGCGGGAAGTACTaGGCCCCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPSGKY*APLRRA
Trigger: TGCTCTTCTCAGAGGGGCCCAGTACTTCCCGCTGGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGTCAGAGGAGTCTGCTaGGAACGGGAGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALVRGVC*ERELCG
Trigger: GCCGCAGAGCTCCCGTTCCCAGCAGACTCCTCTGAC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCCCCCTACTTTGGCTaGGGGCGTGAGCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSPYFG*GREPPG
Trigger: TCCTGGAGGCTCACGCCCCCAGCCAAAGTAGGGGGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGGGTCAGAGGCACCCTaGGAGGTTTGTACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAGSEAP*EVCTGL
Trigger: CAGCCCAGTACAAACCTCCCAGGGTGCCTCTGACCC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCGGGGAGCCTGGCTTaGGGACGTCTATATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPGSLA*GRLYLR
Trigger: CCTCAGATATAGACGTCCCCAAGCCAGGCTCCCCGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGGGTGCACTGAGCCTTaGAGTGCCCGGGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALGCTEP*SARDGG
Trigger: TCCACCATCCCGGGCACTCCAAGGCTCAGTGCACCC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGACCCATGCGGTCAGCTaGGGCCTAGGGTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGTHAVS*GLGWLF
Trigger: AAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTACCCATGCGGTCAGCTaGGGCCTAGGGTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPTHAVS*GLGWLF
Trigger: AAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCAGCTAGCAGCACCTTaGGGGCAATGCGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGQLAAP*GQCGLA
Trigger: AGCGAGTCCGCATTGCCCCCAAGGTGCTGCTAGCTG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCAGCTAGCAGCACCTTaGGGGCAATGCGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAQLAAP*GQCGLA
Trigger: AGCGAGTCCGCATTGCCCCCAAGGTGCTGCTAGCTG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CAA 72 bp CAGAACAGTCCCTGCCTGCTGTCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGGAGTGCCCGGGATGGT +
Preference number: 4 (lower is better)
Translates to: QNSPCLLSSLRG*GCTEPWSARDG
Trigger: ACCATCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGACAGCAGGCAGGGACTGTTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGGGVRF*WSCSGG
Trigger: TCCGCCGGAACATGACCATCAAAACCGAACTCCCCC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGTACCAGGTATGAGCTaGCCCGTGGTAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGVPGMS*PVVAVA
Trigger: AGCCACTGCTACCACGGGTCAGCTCATACCTGGTAC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGGGCTGCAACACCAGTaGCTGGTTCACCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALGLQHQ*LVHREL
Trigger: CAGTTCCCGGTGAACCAGTCACTGGTGTTGCAGCCC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGTTTGTTCCGCTGTTTaGAATTGGCGCCGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPVCSAV*NWRRRS
Trigger: GCTCCGCCGGCGCCAATTTCAAACAGCGGAACAAAC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359843.8
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCAATGCGGACTCGCTTaGTATGGCGGGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAQCGLA*YGGQAL
Trigger: CAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTAGGGTCAGAGGAGTCTaGTGGGAACGGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALRVRGV*WERELC
Trigger: GCAGAGCTCCCGTTCCCAGCAGACTCCTCTGACCCT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGCACCTTGGGGGCAATaGGGACTCGCTTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALAPWGQ*GLACYG
Trigger: GCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGVPAEL*IRSFLL
Trigger: CAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAAC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTTCCTCTTTGAAAGATaGGGCCGGGGAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAFLFER*GRGGPL
Trigger: GAGTGGCCCTCCCCGGCCCCATCTTTCAAAGAGGAA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTTCCTCTTTGAAAGATaGGGCCGGGGAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGFLFER*GRGGPL
Trigger: GAGTGGCCCTCCCCGGCCCCATCTTTCAAAGAGGAA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCTTGGGGTGGGAGATTaGGACGAATCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGLGVGD*DESSQE
Trigger: CTCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCGAGACACACCGGGTTaGGGACCTAAGCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGRDTPG*GPKPTV
Trigger: TACAGTGGGCTTAGGTCCCCAACCCGGTGTGTCTCG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGTCAGAGGAGTCTGCTaGGAACGGGAGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSVRGVC*ERELCG
Trigger: GCCGCAGAGCTCCCGTTCCCAGCAGACTCCTCTGAC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCTCACTCAGAGGCTTaGGGTGCACTGAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPHSEA*GALSLG
Trigger: TCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGAGCTGGGGCCTAGGGTaGCTCTTTGCAAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSWGLG*LFAKLR
Trigger: CCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGTTCTGCCAGGACGCTaGTGGTCTCGAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSVLPGR*WSRRLL
Trigger: GAGGAGCCTTCGAGACCATCAGCGTCCTGGCAGAAC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCGGTTGGCACTGGGGTaGATGGTCCAGAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSRLALG*MVQKET
Trigger: GGTCTCCTTCTGGACCATTCACCCCAGTGCCAACCG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGCTCTCCACTTTaGTGGGTCTCGCTAAGTGTG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAEGSPL*WVSLSV
Trigger: CACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGAGATGATTCCTCTTTaGAAGATGGGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPEMIPL*KMGPGR
Trigger: CCTCCCCGGCCCCATCTTTCAAAGAGGAATCATCTC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAGTACTGGGCCCCTCTaGGAAGAGCAGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWSTGPL*EEQLRL
Trigger: GAGCCGGAGCTGCTCTTCTCAGAGGGGCCCAGTACT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAAGGCTTGGGGTGCACTaGGCCTTGGAGTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVRLGVH*ALECPG
Trigger: TCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCAAGAGTTGGACTCTaGCACTTCCTTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAARVGL*HFLGGL
Trigger: GAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGCAAGAGTTGGACTCTaGCACTTCCTTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPARVGL*HFLGGL
Trigger: GAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TATGAGCTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGTGTTGGGCCCACTACTaGCACTCTCTTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: YELTRGSSGFIFRRAPRGCWAHY*HSLFPW
Trigger: CCAAGGGAAAAGAGAGTGGCAGTAGTGGGCCCAACA...CCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAGCTCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGATAGTGCAGCCTGCTaGCTCACCATCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGDSAAC*LTICTG
Trigger: ACCTGTGCAGATGGTGAGGCAGCAGGCTGCACTATC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCGGACAAACATGTCGTaGAGGGAAAGGTTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKARTNMS*RERLWR
Trigger: CCGCCACAACCTTTCCCTGCACGACATGTTTGTCCG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCGGACAAACATGTCGTaGAGGGAAAGGTTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGRTNMS*RERLWR
Trigger: CCGCCACAACCTTTCCCTGCACGACATGTTTGTCCG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGTCCAGAAGGAGACCTTaGCATTGGCAGACGTCTCCC +
Preference number: 4 (lower is better)
Translates to: HLPPCAQGEFGFDGHVPASRRRP*HWQTSP
Trigger: GGGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGA...CGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTACCTTCACCGAGGGCTaGAACACCAGTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPTFTEG*NTSDWF
Trigger: GAACCAGTCACTGGTGTTGCAGCCCTCGGTGAAGGT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCAGGGAGGCAGTAGATaGTGTTTTCTCCGAGACCGG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPQGGSR*CFLRDR
Trigger: CCGGTCTCGGAGAAAACAGCATCTACTGCCTCCCTG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGCCTGGAAGAAACCGTaGACTGCAGGTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGAWKKP*TAGLPF
Trigger: GAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCCTGGAAGAAACCGTaGACTGCAGGTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAAWKKP*TAGLPF
Trigger: GAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCTAGGGTGGCTCTTTaGAAAGCTGAGGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPRVAL*KAEGQA
Trigger: AGCTTGCCCCTCAGCTTTGCAAAGAGCCACCCTAGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCTAGCTGCAGGTTTTaGTCCCAAGGTCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPSCRF*SQGLQG
Trigger: ACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTAGTAGCGGTTGGCACTaGGGTGAATGGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSSGWH*GEWSRR
Trigger: CCTTCTGGACCATTCACCCCAGTGCCAACCGCTACT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTAGTAGCGGTTGGCACTaGGGTGAATGGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASSGWH*GEWSRR
Trigger: CCTTCTGGACCATTCACCCCAGTGCCAACCGCTACT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TATGAGCTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGATGTCAAGTAGCGGTTaGCACTGGGGTGAATGGTCC +
Preference number: 4 (lower is better)
Translates to: YELTRGSSGFIFRRAPRGMSSSG*HWGEWS
Trigger: GGACCATTCACCCCAGTGCCAACCGCTACTTGACAT...CCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAGCTCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTTCCTCTTTGAAAGATaGGGCCGGGGAGGGCCACTC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALFLFER*GRGGPL
Trigger: GAGTGGCCCTCCCCGGCCCCATCTTTCAAAGAGGAA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCAGATTTGCTCGGGGTaGAGGAGATGGGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGQICSG*RRWAAF
Trigger: AAACGCTGCCCATCTCCTCCACCCCGAGCAAATCTG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCTGGGAGGTTTGTACTaGGCTGAAATCCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPLGGLY*AEIQSP
Trigger: GGGGGACTGGATTTCAGCCCAGTACAAACCTCCCAG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCTGGGAGGTTTGTACTaGGCTGAAATCCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALGGLY*AEIQSP
Trigger: GGGGGACTGGATTTCAGCCCAGTACAAACCTCCCAG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGTTGTCAGGGCCCAGTaGGTCCTCGTCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVVVRAQ*VLVQAR
Trigger: CCTGGCCTGGACGAGGACCCACTGGGCCCTGACAAC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCCTCACTCAGAGGCTTaGGGTGCACTGAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALPHSEA*GALSLG
Trigger: TCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTAC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGTRSQQ*LGCDCY
Trigger: GTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCCAGGTACCTCAGCCTaGAAGAAACCGTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAPGTSA*KKPCTA
Trigger: TGCAGTGCACGGTTTCTTCCAGGCTGAGGTACCTGG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTAGCTGGGGCCTAGGGTaGCTCTTTGCAAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSWGLG*LFAKLR
Trigger: CCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCAGCTAGCAGCACCTTaGGGGCAATGCGGACTCGCT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSQLAAP*GQCGLA
Trigger: AGCGAGTCCGCATTGCCCCCAAGGTGCTGCTAGCTG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
3UTR CAA 72 bp TTCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGTTTaGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGT +
Preference number: 4 (lower is better)
Translates to: FIFRRAPRGSSV*MVMFRRSSGFG
Trigger: ACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGGCGGAAGATGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTTGGAGGCCTCTGCTTaGTTAGACTCCTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALEASA*LDSCWA
Trigger: TGCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCCTCCATCTCTTGCTTaGTGCTGCGGGAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWPPSLA*CCGSPV
Trigger: GACTGGGCTCCCGCAGCATCAAGCAAGAGATGGAGG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGGGCTGCAACACCAGTaGCTGGTTCACCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWGLQHQ*LVHREL
Trigger: CAGTTCCCGGTGAACCAGTCACTGGTGTTGCAGCCC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAATGGCGGGCAAGCTCTaGGCTCATGAGGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVMAGKL*AHEGSR
Trigger: GCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCAT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAAGTACTGGGCCCCTCTaGGAAGAGCAGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSTGPL*EEQLRL
Trigger: GAGCCGGAGCTGCTCTTCTCAGAGGGGCCCAGTACT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTTCTTGCAGGAAAGCTaGCTTGGAAACACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGFLQES*LGNTGR
Trigger: CCTCCCCGTGTTTCCAAGTCAGCTTTCCTGCAAGAA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTCTCAAGCCTCCACCTaGGTTCTCGTCAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSQAST*VLVNAS
Trigger: ACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTGTTGGGCCCACTACTaGCACTCTCTTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPCWAHY*HSLFPW
Trigger: CCAAGGGAAAAGAGAGTGGCAGTAGTGGGCCCAACA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGATAGTGCAGCCTGCTaGCTCACCATCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALDSAAC*LTICTG
Trigger: ACCTGTGCAGATGGTGAGGCAGCAGGCTGCACTATC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTTTTCCTCCATCTCTTaGTTGATGCTGCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAFSSIS*LMLREP
Trigger: GGGCTCCCGCAGCATCAAGCAAGAGATGGAGGAAAA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCAGACACAGAGTTCTaGCAGGACGCTGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSDTEF*QDADGL
Trigger: GAGACCATCAGCGTCCTGGCAGAACTCTGTGTCTGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCCAGAAGGAGACCTTaGCATTGGCAGACGTCTCCC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSRRRP*HWQTSP
Trigger: GGGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCAGGGAGGCAGTAGATaGTGTTTTCTCCGAGACCGG +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALQGGSR*CFLRDR
Trigger: CCGGTCTCGGAGAAAACAGCATCTACTGCCTCCCTG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCTCAGAGGCTTGGGGTaGACTGAGCCTTGGAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLRGLG*TEPWSA
Trigger: GGCACTCCAAGGCTCAGTGCACCCCAAGCCTCTGAG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTACACTCTGCTTCAGTTaGATCCATCCTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPTLCFS*IHPPTP
Trigger: TGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTACACTCTGCTTCAGTTaGATCCATCCTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKATLCFS*IHPPTP
Trigger: TGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTGGGCACCCACACTCTaGTTCAGTTGCATCCATCCT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGWAPTL*FSCIHP
Trigger: AGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTAGGAGACCTTGCCATTaGCAGACGTCTCCCGGACAA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALRRPCH*QTSPGQ
Trigger: TTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTGGATTCAGTAGCGGTTGGCACTaGGGTGAATGGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: APRGSSVLMVMFRRSSGFSSGWH*GEWSRR
Trigger: CCTTCTGGACCATTCACCCCAGTGCCAACCGCTACT...GAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTATGTCAAGTAGCGGTTaGCACTGGGGTGAATGGTCC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAMSSSG*HWGEWS
Trigger: GGACCATTCACCCCAGTGCCAACCGCTACTTGACAT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGTGCTCGGGCAATTGTaGAGACCCTGGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWVLGQL*RPWVQW
Trigger: CCACTGGACCCAGGGTCTCCACAATTGCCCGAGCAC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTTGGGGTGGGAGATTaGGACGAATCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLGVGD*DESSQE
Trigger: CTCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATCCCCCTACTTTGGCTaGGGGCGTGAGCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSPYFG*GREPPG
Trigger: TCCTGGAGGCTCACGCCCCCAGCCAAAGTAGGGGGA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCTGGGAGGTTTGTACTaGGCTGAAATCCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALLGGLY*AEIQSP
Trigger: GGGGGACTGGATTTCAGCCCAGTACAAACCTCCCAG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGGGTCAGAGGCACCCTaGGAGGTTTGTACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWGSEAP*EVCTGL
Trigger: CAGCCCAGTACAAACCTCCCAGGGTGCCTCTGACCC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCCGGGGAGCCTGGCTTaGGGACGTCTATATCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWPGSLA*GRLYLR
Trigger: CCTCAGATATAGACGTCCCCAAGCCAGGCTCCCCGG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCCTCACTCAGAGGCTTaGGGTGCACTGAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSPHSEA*GALSLG
Trigger: TCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGCAGGAAAGCTGACTTaGAAACACGGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALAGKLT*KHGEVA
Trigger: TGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTGC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCGGAGTCCTGGAGGCTaGGTTGGGGCTCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRSPGG*VGAPPQ
Trigger: CTGTGGGGGAGCCCCAACTCAGCCTCCAGGACTCCG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTCTCAGTGCTGTTGATGGCGAATTGTATCATGGCCATGTAAGAGTAGGGTGGCGGAGTCCTGGAGGCTaGGTTGGGGCTCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: PLSAVDGELYHGHVRVGWRSPGG*VGAPPQ
Trigger: CTGTGGGGGAGCCCCAACTCAGCCTCCAGGACTCCG...CCACCCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGTTCTGCCAGGACGCTaGTGGTCTCGAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVVLPGR*WSRRLL
Trigger: GAGGAGCCTTCGAGACCATCAGCGTCCTGGCAGAAC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGAGACCTTGCCATTGGCAGACGTCTCCCGGACAAACATGTCGTGCAGGGAAAGGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: GDLAIGRRLPDKHVVQGKGGVRF*WSCSGG
Trigger: TCCGCCGGAACATGACCATCAAAACCGAACTCCCCC...CTTTCCCTGCACGACATGTTTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGTACCAGGTATGAGCTaGCCCGTGGTAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWVPGMS*PVVAVA
Trigger: AGCCACTGCTACCACGGGTCAGCTCATACCTGGTAC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGAGATGATTCCTCTTTaGAAGATGGGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSEMIPL*KMGPGR
Trigger: CCTCCCCGGCCCCATCTTTCAAAGAGGAATCATCTC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCTCCTCTCCCTGTGTTaGATCACAAGCATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPLLSLC*ITSISE
Trigger: CTCGGAAATGCTTGTGATTCAACACAGGGAGAGGAG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCTCCTCTCCCTGTGTTaGATCACAAGCATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALLSLC*ITSISE
Trigger: CTCGGAAATGCTTGTGATTCAACACAGGGAGAGGAG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTAGGTTTGTACTGGGCTaGAATCCAGTCCCCCTACTT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPRFVLG*NPVPLL
Trigger: AAGTAGGGGGACTGGATTTCAGCCCAGTACAAACCT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTAGGTTTGTACTGGGCTaGAATCCAGTCCCCCTACTT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKARFVLG*NPVPLL
Trigger: AAGTAGGGGGACTGGATTTCAGCCCAGTACAAACCT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGAGGTTTGTACTGGGCTaGAATCCAGTCCCCCTACTT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGRFVLG*NPVPLL
Trigger: AAGTAGGGGGACTGGATTTCAGCCCAGTACAAACCT...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCCAGCAGGATCTTGCTaGGGCTGTCATTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPPAGSC*GCHSLC
Trigger: ACACAATGAATGACAGCCTCAGCAAGATCCTGCTGG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGCAAGAGTTGGACTCTaGCACTTCCTTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSARVGL*HFLGGL
Trigger: GAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCAGGTCTCCCGTTTCTaGTCGCAAAGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWQVSRF*SQRAPG
Trigger: ACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTTTTCCTCCATCTCTTaGTTGATGCTGCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALFSSIS*LMLREP
Trigger: GGGCTCCCGCAGCATCAAGCAAGAGATGGAGGAAAA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTCCAGAAGGAGACCTTaGCATTGGCAGACGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSSRRRP*HWQTSP
Trigger: GGGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTGCTGTGATTCCAAGTaGTCGGGCAATTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGCCDSK*SGNCGD
Trigger: GTCTCCACAATTGCCCGAGCACTTGGAATCACAGCA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCAATGCGGACTCGCTTaGTATGGCGGGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWQCGLA*YGGQAL
Trigger: CAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCAGGGAGGCAGTAGATaGTGTTTTCTCCGAGACCGG +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSQGGSR*CFLRDR
Trigger: CCGGTCTCGGAGAAAACAGCATCTACTGCCTCCCTG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAAGGGTCAGAGGAGTCTaGTGGGAACGGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVRVRGV*WERELC
Trigger: GCAGAGCTCCCGTTCCCAGCAGACTCCTCTGACCCT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCAGAGAACGATTGGCTaGAAGGCCAGAAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALQRTIG*KARNLW
Trigger: CCACAGGTTTCTGGCCTTGCAGCCAATCGTTCTCTG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGAGCAGAACAGTCCCTaGCTGCTGTCCTCACTCAGA +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSEQNSP*LLSSLR
Trigger: TCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCCTAGGGTGGCTCTTTaGAAAGCTGAGGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSPRVAL*KAEGQA
Trigger: AGCTTGCCCCTCAGCTTTGCAAAGAGCCACCCTAGG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TATGAGCTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGTTTTGGCATCATAGCTaGTTTGGGTTTGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: YELTRGSSGFIFRRAPRGFWHHS*FGFEAG
Trigger: TCCGGCCTCAAACCCAAACCAGCTATGATGCCAAAA...CCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAGCTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATC +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAAKGSR*SRKIHI
Trigger: GATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCAATTGTGGAGACCCTaGGTCCAGTGGCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGQLWRP*VQWLKH
Trigger: GTGTTTAAGCCACTGGACCCAGGGTCTCCACAATTG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGTGCTCGGGCAATTGTaGAGACCCTGGGTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVVLGQL*RPWVQW
Trigger: CCACTGGACCCAGGGTCTCCACAATTGCCCGAGCAC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTGGTTCACCGGGAACTaGATAGGTACCAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGWFTGN*IGTRYE
Trigger: CTCATACCTGGTACCTATCCAGTTCCCGGTGAACCA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTGGTTCACCGGGAACTaGATAGGTACCAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAWFTGN*IGTRYE
Trigger: CTCATACCTGGTACCTATCCAGTTCCCGGTGAACCA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTGCAACACCAGTGACTaGTTCACCGGGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPCNTSD*FTGNWI
Trigger: TATCCAGTTCCCGGTGAACCAGTCACTGGTGTTGCA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVRTRLL*RASSEL
Trigger: GAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCAGATTTGCTCGGGGTaGAGGAGATGGGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSQICSG*RRWAAF
Trigger: AAACGCTGCCCATCTCCTCCACCCCGAGCAAATCTG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGGCTCCGGGGAGCCTaGCTTGGGGACGTCTATATC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVWLRGA*LGDVYI
Trigger: GATATAGACGTCCCCAAGCCAGGCTCCCCGGAGCCA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTAC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSTRSQQ*LGCDCY
Trigger: GTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGCAGGAAAGCTGACTTaGAAACACGGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSAGKLT*KHGEVA
Trigger: TGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTGC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAGCTGGGGCCTAGGGTaGCTCTTTGCAAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWSWGLG*LFAKLR
Trigger: CCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCTTAGGTTCCTCCTCTaGTGTTTCACTTGGGGCATT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPLRFLL*CFTWGI
Trigger: AATGCCCCAAGTGAAACATCAGAGGAGGAACCTAAG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTTGGAGGCCTCTGCTTaGTTAGACTCCTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLEASA*LDSCWA
Trigger: TGCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTGTCGCTGCTCCAGGTaGCAATTCTCCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSCRCSR*QFSFSS
Trigger: GGAGGAAAAGGAGAATTGTCACCTGGAGCAGCGACA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVGGVRF*WSCSGG
Trigger: TCCGCCGGAACATGACCATCAAAACCGAACTCCCCC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCGTACCAGGTATGAGCTaGCCCGTGGTAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SVLMVMFRRSSGFGRFCCVPGMS*PVVAVA
Trigger: AGCCACTGCTACCACGGGTCAGCTCATACCTGGTAC...GCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGAGGGCTCTCCACTTTaGTGGGTCTCGCTAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWEGSPL*WVSLSV
Trigger: CACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGAGATGATTCCTCTTTaGAAGATGGGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWEMIPL*KMGPGR
Trigger: CCTCCCCGGCCCCATCTTTCAAAGAGGAATCATCTC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCTCCCAGGAGTGAGATaGTTCCTCTTTGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPLPGVR*FLFERW
Trigger: CCATCTTTCAAAGAGGAATCATCTCACTCCTGGGAG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCTCCCAGGAGTGAGATaGTTCCTCTTTGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALPGVR*FLFERW
Trigger: CCATCTTTCAAAGAGGAATCATCTCACTCCTGGGAG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCTCCTCTCCCTGTGTTaGATCACAAGCATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALLLSLC*ITSISE
Trigger: CTCGGAAATGCTTGTGATTCAACACAGGGAGAGGAG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGGCTTGGGGTGCACTaGGCCTTGGAGTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRLGVH*ALECPG
Trigger: TCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCCCAGCTGGAAACTTaGAAGAGTTGGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSQLET*KSWTLP
Trigger: TGGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTATTCACATCCCTAGCTaGAGGTTTTGGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAIHIPS*RFWSQG
Trigger: ACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAAT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTGCTGCCTCACCATCTaGACAGGTCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWCCLTI*TGLPFL
Trigger: CAGAAACGGGAGACCTGTGCAGATGGTGAGGCAGCA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGACCTTCACCGAGGGCTaGAACACCAGTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWTFTEG*NTSDWF
Trigger: GAACCAGTCACTGGTGTTGCAGCCCTCGGTGAAGGT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCTCTTTCCCTGGTCCTaGAGAAGAAAGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALFPWS*RRKRSY
Trigger: ATAGCTCCTCTTTCTTCTGCAGGACCAGGGAAAGAG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGGGGAGGACAGATTTaGTCGGGGTGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVWGGQI*SGWRRW
Trigger: CCATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCAGAGAACGATTGGCTaGAAGGCCAGAAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSQRTIG*KARNLW
Trigger: CCACAGGTTTCTGGCCTTGCAGCCAATCGTTCTCTG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGAGCAGAACAGTCCCTaGCTGCTGTCCTCACTCAGA +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWEQNSP*LLSSLR
Trigger: TCTGAGTGAGGACAGCAGGCAGGGACTGTTCTGCTC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGAAGAAACCGTGCACTaGAGGTCTTCCCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGEETVH*RSSLLS
Trigger: TGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCTGAGTTCTCGTCAATaGCAGTCTCCCTGGTATGAT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPLSSRQ*QSPWYD
Trigger: ATCATACCAGGGAGACTGGCATTGACGAGAACTCAG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCCTAGGGTGGCTCTTTaGAAAGCTGAGGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWPRVAL*KAEGQA
Trigger: AGCTTGCCCCTCAGCTTTGCAAAGAGCCACCCTAGG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCTTTTGAGAATCAGTaGCCGACGGGGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSFENQ*PTGASF
Trigger: AAAACTAGCCCCCGTCGGCCACTGATTCTCAAAAGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCTTTTGAGAATCAGTaGCCGACGGGGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASFENQ*PTGASF
Trigger: AAAACTAGCCCCCGTCGGCCACTGATTCTCAAAAGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTTTTGGCATCATAGCTaGTTTGGGTTTGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPFWHHS*FGFEAG
Trigger: TCCGGCCTCAAACCCAAACCAGCTATGATGCCAAAA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCCTAGCTGCAGGTTTTaGTCCCAAGGTCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWPSCRF*SQGLQG
Trigger: ACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCATGTAAGAGTAGGGTaGCCGCTCAGACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALHVRVG*PLRHRV
Trigger: AACTCTGTGTCTGAGCGGCCACCCTACTCTTACATG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGGAGTTCTTCCAGCCTaGCTTGGCAATGTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPGVLPA*LGNVLK
Trigger: TTTAAGCACATTGCCAAGCCAGGCTGGAAGAACTCC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGGAGTTCTTCCAGCCTaGCTTGGCAATGTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAGVLPA*LGNVLK
Trigger: TTTAAGCACATTGCCAAGCCAGGCTGGAAGAACTCC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCAGATTTGCTCGGGGTaGAGGAGATGGGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWQICSG*RRWAAF
Trigger: AAACGCTGCCCATCTCCTCCACCCCGAGCAAATCTG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCTGTCAGAGAACGATTaGCTGCAAGGCCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALLSEND*LQGQKP
Trigger: AGGTTTCTGGCCTTGCAGCCAATCGTTCTCTGACAG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGTTGTCAGGGCCCAGTaGGTCCTCGTCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCVVRAQ*VLVQAR
Trigger: CCTGGCCTGGACGAGGACCCACTGGGCCCTGACAAC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTAAGGTAAGAGACTGCTaGGCAGAGAATGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPKVRDC*AENGNR
Trigger: CCTGTTTCCATTCTCTGCCCAGCAGTCTCTTACCTT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGCAGGAAAGCTGACTTaGAAACACGGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWAGKLT*KHGEVA
Trigger: TGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTGC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTAATAGCGCACATCTaGGCACCCACACTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLIAHI*APTLCF
Trigger: GAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTTAGTGTTCTCAAGCTaGCTCACACCCATGCGGTCA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALLVFSS*LTPMRS
Trigger: TGACCGCATGGGTGTGAGCCAGCTTGAGAACACTAA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTTGGAGGCCTCTGCTTaGTTAGACTCCTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLEASA*LDSCWA
Trigger: TGCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGCTGTGATGATGCTGTaGATATTAGCATTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGAVMML*ILALLG
Trigger: CCCCAACAATGCTAATATTCACAGCATCATCACAGC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCTGTGATGATGCTGTaGATATTAGCATTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAAVMML*ILALLG
Trigger: CCCCAACAATGCTAATATTCACAGCATCATCACAGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCGGAGTCCTGGAGGCTaGGTTGGGGCTCCCCCACAG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRSPGG*VGAPPQ
Trigger: CTGTGGGGGAGCCCCAACTCAGCCTCCAGGACTCCG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACGTTCTGCCAGGACGCTaGTGGTCTCGAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LMVMFRRSSGFGRFCCLNVLPGR*WSRRLL
Trigger: GAGGAGCCTTCGAGACCATCAGCGTCCTGGCAGAAC...GTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACGGTCGTTTCTGCTGTaGTTCCAAGTGCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVRSFLL*FQVLGQ
Trigger: TTGCCCGAGCACTTGGAATCACAGCAGAAACGACCG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCCTCCTTGATAGTCTaGACTGGAAGCAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSSLIV*TGSKGE
Trigger: TTCTCCTTTGCTTCCAGTTCAGACTATCAAGGAGGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGAGGGCTCTCCACTTTaGTGGGTCTCGCTAAGTGTG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVEGSPL*WVSLSV
Trigger: CACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGAATCCTCCCAGGAGTaGGATGATTCCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGESSQE*DDSSLK
Trigger: TTTCAAAGAGGAATCATCTCACTCCTGGGAGGATTC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGAATCCTCCCAGGAGTaGGATGATTCCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPESSQE*DDSSLK
Trigger: TTTCAAAGAGGAATCATCTCACTCCTGGGAGGATTC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGTACTGGGCCCCTCTaGGAAGAGCAGCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSTGPL*EEQLRL
Trigger: GAGCCGGAGCTGCTCTTCTCAGAGGGGCCCAGTACT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTAAGGGTTCTGAACTaGGGAGCCTTTGCGGTGATT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLRVLN*GAFAVI
Trigger: AATCACCGCAAAGGCTCCTCAGTTCAGAACCCTTAG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCAAAGGGGACGGAGATaGGGTCTAAGGGTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWQRGRR*GLRVLN
Trigger: GTTCAGAACCCTTAGACCTCATCTCCGTCCCCTTTG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGGGGACGTCTATATCTaGGGGAGAAGAGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSGDVYI*GRRVAK
Trigger: TTTGGCAACTCTTCTCCCTCAGATATAGACGTCCCC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCCAGCAGGATCTTGCTaGGGCTGTCATTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSPAGSC*GCHSLC
Trigger: ACACAATGAATGACAGCCTCAGCAAGATCCTGCTGG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGGATGGTGGACAGCTTaGGCACAGGGGCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCGWWTA*AQGQGQ
Trigger: CTGCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAAGGCTTGGGGTGCACTaGGCCTTGGAGTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRRLGVH*ALECPG
Trigger: TCCCGGGCACTCCAAGGCTCAGTGCACCCCAAGCCT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTTCTTGCAGGAAAGCTaGCTTGGAAACACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWFLQES*LGNTGR
Trigger: CCTCCCCGTGTTTCCAAGTCAGCTTTCCTGCAAGAA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTGTTGGGCCCACTACTaGCACTCTCTTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWCWAHY*HSLFPW
Trigger: CCAAGGGAAAAGAGAGTGGCAGTAGTGGGCCCAACA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTTTTCCTCCATCTCTTaGTTGATGCTGCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWFSSIS*LMLREP
Trigger: GGGCTCCCGCAGCATCAAGCAAGAGATGGAGGAAAA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCATGGCCATGTAAGAGTAGGGTGGCCGCTCAGACACAGAGTTCTGCCAGGACGTCAGACACAGAGTTCTaGCAGGACGCTGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: SWPCKSRVAAQTQSSARTSDTEF*QDADGL
Trigger: GAGACCATCAGCGTCCTGGCAGAACTCTGTGTCTGA...CGTCCTGGCAGAACTCTGTGTCTGAGCGGCCACCCTACTCTTACATGGCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTGTCTTTCAAAGTCATaGGCTTCCTCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPCLSKS*ASSQCC
Trigger: ACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACGGACAAACATGTCGTaGAGGGAAAGGTTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVRTNMS*RERLWR
Trigger: CCGCCACAACCTTTCCCTGCACGACATGTTTGTCCG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAACCTTCACCGAGGGCTaGAACACCAGTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVTFTEG*NTSDWF
Trigger: GAACCAGTCACTGGTGTTGCAGCCCTCGGTGAAGGT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCAGAGAACGATTGGCTaGAAGGCCAGAAACCTGTGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWQRTIG*KARNLW
Trigger: CCACAGGTTTCTGGCCTTGCAGCCAATCGTTCTCTG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTGTGACTGCTACTTTTaGATAATCAGGCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKACDCYF*IIRQQG
Trigger: TCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTGTGACTGCTACTTTTaGATAATCAGGCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPCDCYF*IIRQQG
Trigger: TCCCTGCTGCCTGATTATGCAAAAGTAGCAGTCACA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTGGGCACCCACACTCTaGTTCAGTTGCATCCATCCT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWWAPTL*FSCIHP
Trigger: AGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACCTAGGGTGGCTCTTTaGAAAGCTGAGGGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVPRVAL*KAEGQA
Trigger: AGCTTGCCCCTCAGCTTTGCAAAGAGCCACCCTAGG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGTTGATAGTGCAGCCTaGTGCCTCACCATCACAGGT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWVDSAA*CLTITG
Trigger: ACCTGTGATGGTGAGGCAGCAGGCTGCACTATCAAC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTTGGGCATGGTGGGGTaGTTAATAATCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALGMVG*LIILIP
Trigger: TGGGATCAAGATTATTAACCACCCCACCATGCCCAA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTTGAGGCCGGAGTCCTaGAGGCTGAGTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCLRPES*RLSWGS
Trigger: GGAGCCCCAACTCAGCCTCCAGGACTCCGGCCTCAA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACACCTGGCCTAGCTGCAGGTTTTaGTCCCAAGGTCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VMFRRSSGFGRFCCLNTWPSCRF*SQGLQG
Trigger: ACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGG...CCAGGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTGGCGAATTGTATCATaGCCATGTAAGAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAWRIVS*PCKSRV
Trigger: CACCCTACTCTTACATGGCCATGATACAATTCGCCA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGGAGTTCTTCCAGCCTaGCTTGGCAATGTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALGVLPA*LGNVLK
Trigger: TTTAAGCACATTGCCAAGCCAGGCTGGAAGAACTCC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGGGAGTTCTTCCAGCCTaGCTTGGCAATGTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: AQGEFGFDGHVPAELWIRGVLPA*LGNVLK
Trigger: TTTAAGCACATTGCCAAGCCAGGCTGGAAGAACTCC...CCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAAGGAGACCTTGCCATTaGCAGACGTCTCCCGGACAA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVRRPCH*QTSPGQ
Trigger: TTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACACCTGGTCCAATGTAGGAGACCTTGCCATTaGCAGACGTCTCCCGGACAA +
Preference number: 4 (lower is better)
Translates to: PAELWIRSFLLLKHLVQCRRPCH*QTSPGQ
Trigger: TTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCT...ACATTGGACCAGGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTGCAACACCAGTGACTaGTTCACCGGGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSCNTSD*FTGNWI
Trigger: TATCCAGTTCCCGGTGAACCAGTCACTGGTGTTGCA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTCTTGGGTCTTGGGGTaGGAGATTGGGACGAATCCT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWSWVLG*EIGTNP
Trigger: AGGATTCGTCCCAATCTCCCACCCCAAGACCCAAGA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCTAATAGCGCACATCTaGGCACCCACACTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLIAHI*APTLCF
Trigger: GAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGTTTTCACTCTCCATTaGGAATCACAAGTGTGGACC +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALVFTLH*ESQVWT
Trigger: GGTCCACACTTGTGATTCTCAATGGAGAGTGAAAAC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGTCGCTGCTCCAGGTaGCAATTCTCCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVCRCSR*QFSFSS
Trigger: GGAGGAAAAGGAGAATTGTCACCTGGAGCAGCGACA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGCAAGGGAGTGGTGCTaGGATCCATCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRAREWC*DPSAPG
Trigger: CCCTGGGGCTGATGGATCTCAGCACCACTCCCTTGC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCTAAGGGTTCTGAACTaGGGAGCCTTTGCGGTGATT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLRVLN*GAFAVI
Trigger: AATCACCGCAAAGGCTCCTCAGTTCAGAACCCTTAG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACAAAGGGGACGGAGATaGGGTCTAAGGGTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVQRGRR*GLRVLN
Trigger: GTTCAGAACCCTTAGACCTCATCTCCGTCCCCTTTG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTCCCTTGGCAGTCAGTaGTGTGATGATGCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSSLGSQ*CDDAVN
Trigger: ATTCACAGCATCATCACAGCACTGACTGCCAAGGGA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTCTTTCCCTGGTCCTaGAGAAGAAAGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLFPWS*RRKRSY
Trigger: ATAGCTCCTCTTTCTTCTGCAGGACCAGGGAAAGAG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWAKGSR*SRKIHI
Trigger: GATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTATCTTTCGAAGCCACTaGATGTTGGATAGGCTATTG +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAIFRSH*MLDRLL
Trigger: CAATAGCCTATCCAACATCCAGTGGCTTCGAAAGAT...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCATGTAAGAGTAGGGTaGCCGCTCAGACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWHVRVG*PLRHRV
Trigger: AACTCTGTGTCTGAGCGGCCACCCTACTCTTACATG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCACTGTAGGACTTCTTaGGTCTTGGGGTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWHCRTS*VLGWEI
Trigger: AATCTCCCACCCCAAGACCCAAGAAGTCCTACAGTG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCCCAGCGGGAAGTACTaGGCCCCTCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCPSGKY*APLRRA
Trigger: TGCTCTTCTCAGAGGGGCCCAGTACTTCCCGCTGGG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGTCAGAGGAGTCTGCTaGGAACGGGAGCTCTGCGGC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRVRGVC*ERELCG
Trigger: GCCGCAGAGCTCCCGTTCCCAGCAGACTCCTCTGAC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGGGTCAGAGGCACCCTaGGAGGTTTGTACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCGSEAP*EVCTGL
Trigger: CAGCCCAGTACAAACCTCCCAGGGTGCCTCTGACCC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTCTCCCTGGTATGATTaGGGACATTATCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSPWYD*GHYQRN
Trigger: GTTTCTCTGATAATGTCCCCAATCATACCAGGGAGA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCTCCCTGGTATGATTaGGGACATTATCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSPWYD*GHYQRN
Trigger: GTTTCTCTGATAATGTCCCCAATCATACCAGGGAGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCAATGCCAGTCTCCCTaGTATGATTGGGGACATTAT +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALQCQSP*YDWGHY
Trigger: ATAATGTCCCCAATCATACCAGGGAGACTGGCATTG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCACCCATGCGGTCAGCTaGGGCCTAGGGTGGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCTHAVS*GLGWLF
Trigger: AAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGCTGTGATGATGCTGTaGATATTAGCATTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSAVMML*ILALLG
Trigger: CCCCAACAATGCTAATATTCACAGCATCATCACAGC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGATGGCGGGCAAGCTCTaGGCTCATGAGGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLMAGKL*AHEGSR
Trigger: GCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCAT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGCAAGGGAGTGGTGCTaGGATCCATCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLAREWC*DPSAPG
Trigger: CCCTGGGGCTGATGGATCTCAGCACCACTCCCTTGC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGCAAGGGAGTGGTGCTaGGATCCATCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKAREWC*DPSAPG
Trigger: CCCTGGGGCTGATGGATCTCAGCACCACTCCCTTGC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACTAAGGGTTCTGAACTaGGGAGCCTTTGCGGTGATT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVLRVLN*GAFAVI
Trigger: AATCACCGCAAAGGCTCCTCAGTTCAGAACCCTTAG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGGGGACGTCTATATCTaGGGGAGAAGAGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVGDVYI*GRRVAK
Trigger: TTTGGCAACTCTTCTCCCTCAGATATAGACGTCCCC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACCAGCAGGATCTTGCTaGGGCTGTCATTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVPAGSC*GCHSLC
Trigger: ACACAATGAATGACAGCCTCAGCAAGATCCTGCTGG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCCCAAATTCAACTCCTaGCCCAATACAAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGPKFNS*PNTKDF
Trigger: AAAGTCTTTTGTATTGGGTCAGGAGTTGAATTTGGG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCCCAAATTCAACTCCTaGCCCAATACAAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAPKFNS*PNTKDF
Trigger: AAAGTCTTTTGTATTGGGTCAGGAGTTGAATTTGGG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACCAGTCTCCCTGGTATaGTTGGGGACATTATCAGAG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVPVSLV*LGTLSE
Trigger: CTCTGATAATGTCCCCAATCATACCAGGGAGACTGG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTCCCTTGGCAGTCAGTaGTGTGATGATGCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWSLGSQ*CDDAVN
Trigger: ATTCACAGCATCATCACAGCACTGACTGCCAAGGGA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGATTCACATCCCTAGCTaGAGGTTTTGGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWIHIPS*RFWSQG
Trigger: ACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAAT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCAGGTCTCCCGTTTCTaGTCGCAAAGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCQVSRF*SQRAPG
Trigger: ACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTGTCTTTCAAAGTCATaGGCTTCCTCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSCLSKS*ASSQCC
Trigger: ACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCAATGCGGACTCGCTTaGTATGGCGGGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCQCGLA*YGGQAL
Trigger: CAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTGGGGAGGACAGATTTaGTCGGGGTGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCWGGQI*SGWRRW
Trigger: CCATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTTGGGCATGGTGGGGTaGTTAATAATCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLGMVG*LIILIP
Trigger: TGGGATCAAGATTATTAACCACCCCACCATGCCCAA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTTGAGGCCGGAGTCCTaGAGGCTGAGTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLRPES*RLSWGS
Trigger: GGAGCCCCAACTCAGCCTCCAGGACTCCGGCCTCAA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVAKGSR*SRKIHI
Trigger: GATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp ACACCTGGTCCAATGTCAAGTAGCGGTTGGCACTGGGGTGAATGGTCCAGAAGGGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATC +
Preference number: 4 (lower is better)
Translates to: TPGPMSSSGWHWGEWSRRAKGSR*SRKIHI
Trigger: GATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGC...CCTTCTGGACCATTCACCCCAGTGCCAACCGCTACTTGACATTGGACCAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACAATTGTGGAGACCCTaGGTCCAGTGGCTTAAACAC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVQLWRP*VQWLKH
Trigger: GTGTTTAAGCCACTGGACCCAGGGTCTCCACAATTG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCVPAEL*IRSFLL
Trigger: CAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAAC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTCTCAGTGCTGTTGATGGCGAATTGTATCATGGCCATGTAAGAGTAGGGTGGGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLSAVDGELYHGHVRVGWVPAEL*IRSFLL
Trigger: CAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAAC...CCACCCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRRTRLL*RASSEL
Trigger: GAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTTTCTCCTCTTTCCCTaGTCCTGCAGAAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWFLLFP*SCRRKR
Trigger: CCTCTTTCTTCTGCAGGACCAGGGAAAGAGGAGAAA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCTTGGGGTGGGAGATTaGGACGAATCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCLGVGD*DESSQE
Trigger: CTCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTCCCCCTACTTTGGCTaGGGGCGTGAGCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLSPYFG*GREPPG
Trigger: TCCTGGAGGCTCACGCCCCCAGCCAAAGTAGGGGGA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATGGCTCCGGGGAGCCTaGCTTGGGGACGTCTATATC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRWLRGA*LGDVYI
Trigger: GATATAGACGTCCCCAAGCCAGGCTCCCCGGAGCCA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACTGTCAGAGAACGATTaGCTGCAAGGCCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVLSEND*LQGQKP
Trigger: AGGTTTCTGGCCTTGCAGCCAATCGTTCTCTGACAG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCCTCACTCAGAGGCTTaGGGTGCACTGAGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCPHSEA*GALSLG
Trigger: TCCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCCACCCTTCAGCTCCTaGCAGGGACAGCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCPPFSS*QGQQRN
Trigger: ATTCCTCTGCTGTCCCTGCCAGGAGCTGAAGGGTGG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCATCCTACCCACCTTCTaGCAGTCTCTGGATAATGAT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSILPTF*QSLDND
Trigger: ATCATTATCCAGAGACTGCCAGAAGGTGGGTAGGAT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGCTGGGGCCTAGGGTaGCTCTTTGCAAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSWGLG*LFAKLR
Trigger: CCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATTAGTGTTCTCAAGCTaGCTCACACCCATGCGGTCA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVLVFSS*LTPMRS
Trigger: TGACCGCATGGGTGTGAGCCAGCTTGAGAACACTAA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGCCGGGGGTGGGGTCTaGCACCGGAGCTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLAGGGV*HRSFQF
Trigger: AAACTGAAAGCTCCGGTGCCAGACCCCACCCCCGGC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359843.8
ENST00000627656.2
3UTR CAA 72 bp AGTCATGCGCTTCCTCTCAGTGCTGTTGATGGCGAATaGTATCATGGCCATGTAAGAGTAGGGTGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SHALPLSAVDGE*YHGHVRVGWPL
Trigger: GAGCGGCCACCCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGGAAGCGCATGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGTTTTCACTCTCCATTaGGAATCACAAGTGTGGACC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWVFTLH*ESQVWT
Trigger: GGTCCACACTTGTGATTCTCAATGGAGAGTGAAAAC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCCTCCATCTCTTGCTTaGTGCTGCGGGAGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKPPSLA*CCGSPV
Trigger: GACTGGGCTCCCGCAGCATCAAGCAAGAGATGGAGG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGTTCTGCCAGGACGCTaGTGGTCTCGAAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLVLPGR*WSRRLL
Trigger: GAGGAGCCTTCGAGACCATCAGCGTCCTGGCAGAAC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSSQCC*WRIVSW
Trigger: CCATGATACAATTCGCCATCAACAGCACTGAGAGGA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCGGTTGGCACTGGGGTaGATGGTCCAGAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKRLALG*MVQKET
Trigger: GGTCTCCTTCTGGACCATTCACCCCAGTGCCAACCG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGGVRF*WSCSGG
Trigger: TCCGCCGGAACATGACCATCAAAACCGAACTCCCCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGGGCTGCAACACCAGTaGCTGGTTCACCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLGLQHQ*LVHREL
Trigger: CAGTTCCCGGTGAACCAGTCACTGGTGTTGCAGCCC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCAAGCTCTGAGCTCATaGGGGAAGCCGCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNQALSS*GKPPGA
Trigger: TGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACATGGCGGGCAAGCTCTaGGCTCATGAGGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNMAGKL*AHEGSR
Trigger: GCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCAT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGAGGGCTCTCCACTTTaGTGGGTCTCGCTAAGTGTG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCEGSPL*WVSLSV
Trigger: CACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACTCCCAGGAGTGAGATaGTTCCTCTTTGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVLPGVR*FLFERW
Trigger: CCATCTTTCAAAGAGGAATCATCTCACTCCTGGGAG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGCAAGGGAGTGGTGCTaGGATCCATCAGCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNAREWC*DPSAPG
Trigger: CCCTGGGGCTGATGGATCTCAGCACCACTCCCTTGC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGGATGGTGGACAGCTTaGGCACAGGGGCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNGWWTA*AQGQGQ
Trigger: CTGCCCTTGCCCCTGTGCTCAAGCTGTCCACCATCC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTCTGGGTCCCTGCAGTaGAGAACCCAAGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSGSLQ*RTQDPG
Trigger: ACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCACCTTCGCTTTTATTaGGTAGTTAGTGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALHLRFY*VVSVLK
Trigger: CTTGAGAACACTAACTACTCAATAAAAGCGAAGGTG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGGGATGGCCACTACTTaGGTGTTGGGCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLGMATT*VLGMVG
Trigger: CCCCACCATGCCCAACACGCAAGTAGTGGCCATCCC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATCCCTTGGCAGTCAGTaGTGTGATGATGCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSLGSQ*CDDAVN
Trigger: ATTCACAGCATCATCACAGCACTGACTGCCAAGGGA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAATTCACATCCCTAGCTaGAGGTTTTGGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVIHIPS*RFWSQG
Trigger: ACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAAT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACAGGTCTCCCGTTTCTaGTCGCAAAGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRQVSRF*SQRAPG
Trigger: ACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTGCTGCCTCACCATCTaGACAGGTCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCCCLTI*TGLPFL
Trigger: CAGAAACGGGAGACCTGTGCAGATGGTGAGGCAGCA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp CCTCTCAGTGCTGTTGATGGCGAATTGTATCATGGCCATGTAAGAGTAGGGTGGCGGACAAACATGTCGTaGAGGGAAAGGTTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PLSAVDGELYHGHVRVGWRTNMS*RERLWR
Trigger: CCGCCACAACCTTTCCCTGCACGACATGTTTGTCCG...CCACCCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACAATGCGGACTCGCTTaGTATGGCGGGCAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRQCGLA*YGGQAL
Trigger: CAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGAGGGTCAGAGGAGTCTaGTGGGAACGGGAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRVRGV*WERELC
Trigger: GCAGAGCTCCCGTTCCCAGCAGACTCCTCTGACCCT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGAAGAAACCGTGCACTaGAGGTCTTCCCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVEETVH*RSSLLS
Trigger: TGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACTGAGTTCTCGTCAATaGCAGTCTCCCTGGTATGAT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVLSSRQ*QSPWYD
Trigger: ATCATACCAGGGAGACTGGCATTGACGAGAACTCAG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGCACCTTGGGGGCAATaGGGACTCGCTTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLAPWGQ*GLACYG
Trigger: GCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTCAATCCACGTATAGATGTCTTTCAAAGTCATGCGCTTCCTCTCAGTGCTGTTTTGAGGCCGGAGTCCTaGAGGCTGAGTTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LNPRIDVFQSHALPLSAVLRPES*RLSWGS
Trigger: GGAGCCCCAACTCAGCCTCCAGGACTCCGGCCTCAA...AACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACATCTATACGTGGATTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGGAGACCTTGCCATTaGCAGACGTCTCCCGGACAA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRRPCH*QTSPGQ
Trigger: TTGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRTRLL*RASSEL
Trigger: GAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACGAGACACACCGGGTTaGGGACCTAAGCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRRDTPG*GPKPTV
Trigger: TACAGTGGGCTTAGGTCCCCAACCCGGTGTGTCTCG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCCGGGGAGCCTGGCTTaGGGACGTCTATATCTGAGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLPGSLA*GRLYLR
Trigger: CCTCAGATATAGACGTCCCCAAGCCAGGCTCCCCGG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTGGCTCCGGGGAGCCTaGCTTGGGGACGTCTATATC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKWLRGA*LGDVYI
Trigger: GATATAGACGTCCCCAAGCCAGGCTCCCCGGAGCCA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCGGTTGGCACTGGGGTaGATGGTCCAGAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNRLALG*MVQKET
Trigger: GGTCTCCTTCTGGACCATTCACCCCAGTGCCAACCG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACGGTCGTTTCTGCTGTaGTTCCAAGTGCTCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRRSFLL*FQVLGQ
Trigger: TTGCCCGAGCACTTGGAATCACAGCAGAAACGACCG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKGGVRF*WSCSGG
Trigger: TCCGCCGGAACATGACCATCAAAACCGAACTCCCCC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGTACCAGGTATGAGCTaGCCCGTGGTAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKVPGMS*PVVAVA
Trigger: AGCCACTGCTACCACGGGTCAGCTCATACCTGGTAC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGTACCAGGTATGAGCTaGCCCGTGGTAGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLVPGMS*PVVAVA
Trigger: AGCCACTGCTACCACGGGTCAGCTCATACCTGGTAC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGGGCTGCAACACCAGTaGCTGGTTCACCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNGLQHQ*LVHREL
Trigger: CAGTTCCCGGTGAACCAGTCACTGGTGTTGCAGCCC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCCCAAATTCAACTCCTaGCCCAATACAAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSPKFNS*PNTKDF
Trigger: AAAGTCTTTTGTATTGGGTCAGGAGTTGAATTTGGG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCACCTTCGCTTTTATTaGGTAGTTAGTGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSHLRFY*VVSVLK
Trigger: CTTGAGAACACTAACTACTCAATAAAAGCGAAGGTG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTGTTGGGCCCACTACTaGCACTCTCTTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCCWAHY*HSLFPW
Trigger: CCAAGGGAAAAGAGAGTGGCAGTAGTGGGCCCAACA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GTCCTCAATCCACGTATAGATGTCTTTCAAAGTCATGCGCTTCCTCTCAGTGCTCAGGTCTCCCGTTTCTaGTCGCAAAGGGCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VLNPRIDVFQSHALPLSAQVSRF*SQRAPG
Trigger: ACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTG...AGCACTGAGAGGAAGCGCATGACTTTGAAAGACATCTATACGTGGATTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATGCTGCCTCACCATCTaGACAGGTCTCCCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRCCLTI*TGLPFL
Trigger: CAGAAACGGGAGACCTGTGCAGATGGTGAGGCAGCA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGATAGTGCAGCCTGCTaGCTCACCATCTGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRDSAAC*LTICTG
Trigger: ACCTGTGCAGATGGTGAGGCAGCAGGCTGCACTATC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGTTGATAGTGCAGCCTaGTGCCTCACCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCVDSAA*CLTICT
Trigger: TGTGCAGATGGTGAGGCAGCAGGCTGCACTATCAAC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCCAGAAGGAGACCTTaGCATTGGCAGACGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSRRRP*HWQTSP
Trigger: GGGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTGGGGAGGACAGATTTaGTCGGGGTGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLWGGQI*SGWRRW
Trigger: CCATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCACACTCTGCTTCAGTTaGATCCATCCTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCTLCFS*IHPPTP
Trigger: TGGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTGGGCACCCACACTCTaGTTCAGTTGCATCCATCCT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCWAPTL*FSCIHP
Trigger: AGGATGGATGCAACTGAAGCAGAGTGTGGGTGCCCA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAATCTTGATCCCAGCTaGAAACTTGCAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWNLDPS*KLARVG
Trigger: TCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTCCTGGAGGCTGAGTTaGGGCTCCCCCACAGCTGAT +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNSWRLS*GSPTAD
Trigger: ATCAGCTGTGGGGGAGCCCCAACTCAGCCTCCAGGA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACCTAGCTGCAGGTTTTaGTCCCAAGGTCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRPSCRF*SQGLQG
Trigger: ACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCAGCCTGGCTTGGCAATGTGCTTAAAGTAGGGAAAGTGGTCCTCAATCCACGTCATGTAAGAGTAGGGTaGCCGCTCAGACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PAWLGNVLKVGKVVLNPRHVRVG*PLRHRV
Trigger: AACTCTGTGTCTGAGCGGCCACCCTACTCTTACATG...ACGTGGATTGAGGACCACTTTCCCTACTTTAAGCACATTGCCAAGCCAGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGGCGAATTGTATCATaGCCATGTAAGAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVWRIVS*PCKSRV
Trigger: CACCCTACTCTTACATGGCCATGATACAATTCGCCA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKVPAEL*IRSFLL
Trigger: CAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAAC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTTGGGGTGGGAGATTaGGACGAATCCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLGVGD*DESSQE
Trigger: CTCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCGAGACACACCGGGTTaGGGACCTAAGCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKRDTPG*GPKPTV
Trigger: TACAGTGGGCTTAGGTCCCCAACCCGGTGTGTCTCG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACAGATTTGCTCGGGGTaGAGGAGATGGGCAGCGTTT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRQICSG*RRWAAF
Trigger: AAACGCTGCCCATCTCCTCCACCCCGAGCAAATCTG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCCACCCTTCAGCTCCTaGCAGGGACAGCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKPPFSS*QGQQRN
Trigger: ATTCCTCTGCTGTCCCTGCCAGGAGCTGAAGGGTGG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCCACCCTTCAGCTCCTaGCAGGGACAGCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLPPFSS*QGQQRN
Trigger: ATTCCTCTGCTGTCCCTGCCAGGAGCTGAAGGGTGG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAAGAATGGAAACAGGCTaGGGGGTTCCTAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVRMETG*GVPNLF
Trigger: AAAGAGATTAGGAACCCCCCAGCCTGTTTCCATTCT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCTAATAGCGCACATCTaGGCACCCACACTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCLIAHI*APTLCF
Trigger: GAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTCTCCCTGGTATGATTaGGGACATTATCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWSPWYD*GHYQRN
Trigger: GTTTCTCTGATAATGTCCCCAATCATACCAGGGAGA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACAATGCCAGTCTCCCTaGTATGATTGGGGACATTAT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVQCQSP*YDWGHY
Trigger: ATAATGTCCCCAATCATACCAGGGAGACTGGCATTG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AGTGCTGTTGATGGCGAATTGTATCATGGCCATGTAAGAGTAGGGTGGCCGCTCTCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGG +
Preference number: 4 (lower is better)
Translates to: SAVDGELYHGHVRVGWPLSSQCC*WRIVSW
Trigger: CCATGATACAATTCGCCATCAACAGCACTGAGAGGA...GAGCGGCCACCCTACTCTTACATGGCCATGATACAATTCGCCATCAACAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCCAGCAGGATCTTGCTaGGGCTGTCATTCATTGTGT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCPAGSC*GCHSLC
Trigger: ACACAATGAATGACAGCCTCAGCAAGATCCTGCTGG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTCTGGGTCCCTGCAGTaGAGAACCCAAGATCCAGGT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKSGSLQ*RTQDPG
Trigger: ACCTGGATCTTGGGTTCTTCACTGCAGGGACCCAGA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGCAAGAGTTGGACTCTaGCACTTCCTTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLARVGL*HFLGGL
Trigger: GAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGTTGATAGTGCAGCCTaGTGCCTCACCATCTGCACA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRVDSAA*CLTICT
Trigger: TGTGCAGATGGTGAGGCAGCAGGCTGCACTATCAAC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCGGACAAACATGTCGTaGAGGGAAAGGTTGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRTNMS*RERLWR
Trigger: CCGCCACAACCTTTCCCTGCACGACATGTTTGTCCG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTGGGGAGGACAGATTTaGTCGGGGTGGAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNWGGQI*SGWRRW
Trigger: CCATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGCCTGGAAGAAACCGTaGACTGCAGGTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKAWKKP*TAGLPF
Trigger: GAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAATCTTTCGAAGCCACTaGATGTTGGATAGGCTATTG +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVIFRSH*MLDRLL
Trigger: CAATAGCCTATCCAACATCCAGTGGCTTCGAAAGAT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCATGTAAGAGTAGGGTaGCCGCTCAGACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCHVRVG*PLRHRV
Trigger: AACTCTGTGTCTGAGCGGCCACCCTACTCTTACATG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGAGTAGCGGTTGGCACTaGGGTGAATGGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLSSGWH*GEWSRR
Trigger: CCTTCTGGACCATTCACCCCAGTGCCAACCGCTACT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGAGTAGCGGTTGGCACTaGGGTGAATGGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKSSGWH*GEWSRR
Trigger: CCTTCTGGACCATTCACCCCAGTGCCAACCGCTACT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTGGTTCACCGGGAACTaGATAGGTACCAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCWFTGN*IGTRYE
Trigger: CTCATACCTGGTACCTATCCAGTTCCCGGTGAACCA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCTTGGGTCTTGGGGTaGGAGATTGGGACGAATCCT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSWVLG*EIGTNP
Trigger: AGGATTCGTCCCAATCTCCCACCCCAAGACCCAAGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCTGGGAGGTTTGTACTaGGCTGAAATCCAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKLGGLY*AEIQSP
Trigger: GGGGGACTGGATTTCAGCCCAGTACAAACCTCCCAG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAAGCTCAGGAATAAACTaGGACCAGTTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSSGIN*DQLMLS
Trigger: TGACAACATCAACTGGTCCCAGTTTATTCCTGAGCT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGACAAGGTCCCAGCAGTaGCTAGGGTGTGACTGCTAC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKTRSQQ*LGCDCY
Trigger: GTAGCAGTCACACCCTAGCCACTGCTGGGACCTTGT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGCAGGAAAGCTGACTTaGAAACACGGGGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKAGKLT*KHGEVA
Trigger: TGCCACCTCCCCGTGTTTCCAAGTCAGCTTTCCTGC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTGTCGCTGCTCCAGGTaGCAATTCTCCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKCRCSR*QFSFSS
Trigger: GGAGGAAAAGGAGAATTGTCACCTGGAGCAGCGACA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGAGATGATTCCTCTTTaGAAGATGGGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNEMIPL*KMGPGR
Trigger: CCTCCCCGGCCCCATCTTTCAAAGAGGAATCATCTC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGGGACGTCTATATCTaGGGGAGAAGAGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGDVYI*GRRVAK
Trigger: TTTGGCAACTCTTCTCCCTCAGATATAGACGTCCCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTTCTTGCAGGAAAGCTaGCTTGGAAACACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLFLQES*LGNTGR
Trigger: CCTCCCCGTGTTTCCAAGTCAGCTTTCCTGCAAGAA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTTCTTGCAGGAAAGCTaGCTTGGAAACACGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKFLQES*LGNTGR
Trigger: CCTCCCCGTGTTTCCAAGTCAGCTTTCCTGCAAGAA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACCCAAATTCAACTCCTaGCCCAATACAAAAGACTTT +
Preference number: 4 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVPKFNS*PNTKDF
Trigger: AAAGTCTTTTGTATTGGGTCAGGAGTTGAATTTGGG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACCAGTCTCCCTGGTATaGTTGGGGACATTATCAGAG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRPVSLV*LGTLSE
Trigger: CTCTGATAATGTCCCCAATCATACCAGGGAGACTGG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTCTCAAGCCTCCACCTaGGTTCTCGTCAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKSQAST*VLVNAS
Trigger: ACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTTTTCCTCCATCTCTTaGTTGATGCTGCGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKFSSIS*LMLREP
Trigger: GGGCTCCCGCAGCATCAAGCAAGAGATGGAGGAAAA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTCAGACACAGAGTTCTaGCAGGACGCTGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKSDTEF*QDADGL
Trigger: GAGACCATCAGCGTCCTGGCAGAACTCTGTGTCTGA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACTGTCTTTCAAAGTCATaGGCTTCCTCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LMVMFRRSSGFGRFCCLNCLSKS*ASSQCC
Trigger: ACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACA...GTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACACCTTCACCGAGGGCTaGAACACCAGTGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNTFTEG*NTSDWF
Trigger: GAACCAGTCACTGGTGTTGCAGCCCTCGGTGAAGGT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAAACCTTGGGGGCAATaGGGACTCGCTTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNKPWGQ*GLACYG
Trigger: GCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTTT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342628.6
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGCCTGGAAGAAACCGTaGACTGCAGGTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNAWKKP*TAGLPF
Trigger: GAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGGC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGATAGTGCAGCCTGCTaGCTCACCATCACAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNDSAAC*LTITGL
Trigger: GAGACCTGTGATGGTGAGGCAGCAGGCTGCACTATC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTCTTTTGAGAATCAGTaGCCGACGGGGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSFENQ*PTGASF
Trigger: AAAACTAGCCCCCGTCGGCCACTGATTCTCAAAAGA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRAKGSR*SRKIHI
Trigger: GATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGATGTCAAGTAGCGGTTaGCACTGGGGTGAATGGTCC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLMSSSG*HWGEWS
Trigger: GGACCATTCACCCCAGTGCCAACCGCTACTTGACAT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATGGTTCACCGGGAACTaGATAGGTACCAGGTATGAG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRWFTGN*IGTRYE
Trigger: CTCATACCTGGTACCTATCCAGTTCCCGGTGAACCA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTCTTGGGTCTTGGGGTaGGAGATTGGGACGAATCCT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKSWVLG*EIGTNP
Trigger: AGGATTCGTCCCAATCTCCCACCCCAAGACCCAAGA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACTGTCAGAGAACGATTaGCTGCAAGGCCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRLSEND*LQGQKP
Trigger: AGGTTTCTGGCCTTGCAGCCAATCGTTCTCTGACAG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGAATCAGATACTCTTaGGGAACACAAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGIRYS*GTQGPS
Trigger: GCTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAAGGTAAGAGACTGCTaGGCAGAGAATGGAAACAGG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCKVRDC*AENGNR
Trigger: CCTGTTTCCATTCTCTGCCCAGCAGTCTCTTACCTT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCCAGGTACCTCAGCCTaGAAGAAACCGTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNPGTSA*KKPCTA
Trigger: TGCAGTGCACGGTTTCTTCCAGGCTGAGGTACCTGG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGCAGATCCACTTGTCTaGGTCCCTGCAGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKADPLV*VPAVKN
Trigger: GTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTAATAGCGCACATCTaGGCACCCACACTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLIAHI*APTLCF
Trigger: GAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTTGGAGGCCTCTGCTTaGTTAGACTCCTGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNLEASA*LDSCWA
Trigger: TGCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGCTGTGATGATGCTGTaGATATTAGCATTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCAVMML*ILALLG
Trigger: CCCCAACAATGCTAATATTCACAGCATCATCACAGC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSSQCC*WRIVSW
Trigger: CCATGATACAATTCGCCATCAACAGCACTGAGAGGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTCCTCCTTGATAGTCTaGACTGGAAGCAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSSLIV*TGSKGE
Trigger: TTCTCCTTTGCTTCCAGTTCAGACTATCAAGGAGGA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGAATCCTCCCAGGAGTaGGATGATTCCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCESSQE*DDSSLK
Trigger: TTTCAAAGAGGAATCATCTCACTCCTGGGAGGATTC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCTCCTCTCCCTGTGTTaGATCACAAGCATTTCCGAG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKLLSLC*ITSISE
Trigger: CTCGGAAATGCTTGTGATTCAACACAGGGAGAGGAG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGAACAGAAGTCAATTaGAACCCCAGGTCATCCTAC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGTEVN*NPRSSY
Trigger: GTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTCTCAAGCCTCCACCTaGGTTCTCGTCAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNSQAST*VLVNAS
Trigger: ACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTCAGACACAGAGTTCTaGCAGGACGCTGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNSDTEF*QDADGL
Trigger: GAGACCATCAGCGTCCTGGCAGAACTCTGTGTCTGA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTGTCTTTCAAAGTCATaGGCTTCCTCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCCLSKS*ASSQCC
Trigger: ACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGAAGAAACCGTGCACTaGAGGTCTTCCCTTCTATCA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQREETVH*RSSLLS
Trigger: TGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGACTTGTCTGGGTCCCTaGAGTGAAGAACCCAAGATC +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKTCLGP*SEEPKI
Trigger: GATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATTTTGGCATCATAGCTaGTTTGGGTTTGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRFWHHS*FGFEAG
Trigger: TCCGGCCTCAAACCCAAACCAGCTATGATGCCAAAA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCATGTAAGAGTAGGGTaGCCGCTCAGACACAGAGTT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKHVRVG*PLRHRV
Trigger: AACTCTGTGTCTGAGCGGCCACCCTACTCTTACATG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGAGTTCTTCCAGCCTaGCTTGGCAATGTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGVLPA*LGNVLK
Trigger: TTTAAGCACATTGCCAAGCCAGGCTGGAAGAACTCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACATGTCAAGTAGCGGTTaGCACTGGGGTGAATGGTCC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNMSSSG*HWGEWS
Trigger: GGACCATTCACCCCAGTGCCAACCGCTACTTGACAT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTGCAACACCAGTGACTaGTTCACCGGGAACTGGATA +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLCNTSD*FTGNWI
Trigger: TATCCAGTTCCCGGTGAACCAGTCACTGGTGTTGCA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATTTCTCCTCTTTCCCTaGTCCTGCAGAAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRFLLFP*SCRRKR
Trigger: CCTCTTTCTTCTGCAGGACCAGGGAAAGAGGAGAAA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCACTGTAGGACTTCTTaGGTCTTGGGGTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKHCRTS*VLGWEI
Trigger: AATCTCCCACCCCAAGACCCAAGAAGTCCTACAGTG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGAATGGAAACAGGCTaGGGGGTTCCTAATCTCTTT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRMETG*GVPNLF
Trigger: AAAGAGATTAGGAACCCCCCAGCCTGTTTCCATTCT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGCAGATCCACTTGTCTaGGTCCCTGCAGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNADPLV*VPAVKN
Trigger: GTTCTTCACTGCAGGGACCCAGACAAGTGGATCTGC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTTAGGTTCCTCCTCTaGTGTTTCACTTGGGGCATT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLRFLL*CFTWGI
Trigger: AATGCCCCAAGTGAAACATCAGAGGAGGAACCTAAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKSSQCC*WRIVSW
Trigger: CCATGATACAATTCGCCATCAACAGCACTGAGAGGA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTCCTCTCAGTGCTGTTaGTGGCGAATTGTATCATGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLSSQCC*WRIVSW
Trigger: CCATGATACAATTCGCCATCAACAGCACTGAGAGGA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCCTCCTTGATAGTCTaGACTGGAAGCAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSSLIV*TGSKGE
Trigger: TTCTCCTTTGCTTCCAGTTCAGACTATCAAGGAGGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAGGTTTGTACTGGGCTaGAATCCAGTCCCCCTACTT +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNRFVLG*NPVPLL
Trigger: AAGTAGGGGGACTGGATTTCAGCCCAGTACAAACCT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGGGGACGTCTATATCTaGGGGAGAAGAGTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNGDVYI*GRRVAK
Trigger: TTTGGCAACTCTTCTCCCTCAGATATAGACGTCCCC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGATTCACATCCCTAGCTaGAGGTTTTGGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKIHIPS*RFWSQG
Trigger: ACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAAT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTGCTGTGATTCCAAGTaGTCGGGCAATTGTGGAGAC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNCCDSK*SGNCGD
Trigger: GTCTCCACAATTGCCCGAGCACTTGGAATCACAGCA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCTCTTTCCCTGGTCCTaGAGAAGAAAGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKLFPWS*RRKRSY
Trigger: ATAGCTCCTCTTTCTTCTGCAGGACCAGGGAAAGAG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTCTTTCCCTGGTCCTaGAGAAGAAAGAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLFPWS*RRKRSY
Trigger: ATAGCTCCTCTTTCTTCTGCAGGACCAGGGAAAGAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACACTTGTCTGGGTCCCTaGAGTGAAGAACCCAAGATC +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNTCLGP*SEEPKI
Trigger: GATCTTGGGTTCTTCACTGCAGGGACCCAGACAAGT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCTGAGTTCTCGTCAATaGCAGTCTCCCTGGTATGAT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKLSSRQ*QSPWYD
Trigger: ATCATACCAGGGAGACTGGCATTGACGAGAACTCAG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTGAGTTCTCGTCAATaGCAGTCTCCCTGGTATGAT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLSSRQ*QSPWYD
Trigger: ATCATACCAGGGAGACTGGCATTGACGAGAACTCAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGGATTCGGTCGTTTCTaGTGCTGCTTAAACACCTGG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNGFGRF*CCLNTW
Trigger: CCAGGTGTTTAAGCAGCAGCAGAAACGACCGAATCC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTCTTTTGAGAATCAGTaGCCGACGGGGGCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLSFENQ*PTGASF
Trigger: AAAACTAGCCCCCGTCGGCCACTGATTCTCAAAAGA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAAACTTGCAAGAGTTaGACTCTGCCACTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKETCKS*TLPLPW
Trigger: CCAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAATCTTGATCCCAGCTaGAAACTTGCAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCNLDPS*KLARVG
Trigger: TCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATTGGGCATGGTGGGGTaGTTAATAATCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRLGMVG*LIILIP
Trigger: TGGGATCAAGATTATTAACCACCCCACCATGCCCAA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTTTTGGCATCATAGCTaGTTTGGGTTTGAGGCCGGA +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKFWHHS*FGFEAG
Trigger: TCCGGCCTCAAACCCAAACCAGCTATGATGCCAAAA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTTTCTCCTCTTTCCCTaGTCCTGCAGAAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLFLLFP*SCRRKR
Trigger: CCTCTTTCTTCTGCAGGACCAGGGAAAGAGGAGAAA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCACTGTAGGACTTCTTaGGTCTTGGGGTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNHCRTS*VLGWEI
Trigger: AATCTCCCACCCCAAGACCCAAGAAGTCCTACAGTG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAATCCTACCCACCTTCTaGCAGTCTCTGGATAATGAT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRILPTF*QSLDND
Trigger: ATCATTATCCAGAGACTGCCAGAAGGTGGGTAGGAT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACAATGCCAGTCTCCCTaGTATGATTGGGGACATTAT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRQCQSP*YDWGHY
Trigger: ATAATGTCCCCAATCATACCAGGGAGACTGGCATTG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGTTTTCACTCTCCATTaGGAATCACAAGTGTGGACC +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLVFTLH*ESQVWT
Trigger: GGTCCACACTTGTGATTCTCAATGGAGAGTGAAAAC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTCCTCCTTGATAGTCTaGACTGGAAGCAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLSSLIV*TGSKGE
Trigger: TTCTCCTTTGCTTCCAGTTCAGACTATCAAGGAGGA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCTCCCAGGAGTGAGATaGTTCCTCTTTGAAAGATGG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNLPGVR*FLFERW
Trigger: CCATCTTTCAAAGAGGAATCATCTCACTCCTGGGAG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCACCTTCGCTTTTATTaGGTAGTTAGTGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCHLRFY*VVSVLK
Trigger: CTTGAGAACACTAACTACTCAATAAAAGCGAAGGTG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTCAATCCACGTATAGATGTCTTTCAAAGTCATGCGCTTCCTCTCAGTGCTGTTATTCACATCCCTAGCTaGAGGTTTTGGTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LNPRIDVFQSHALPLSAVIHIPS*RFWSQG
Trigger: ACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAAT...AACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACATCTATACGTGGATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR GCA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTGTCTTTCAAAGTCATaGGCTTCCTCTCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLCLSKS*ASSQCC
Trigger: ACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR GCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAATCTCTTTTCACCATTaGCTTTGTTGTTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRISFHH*LCCSHP
Trigger: AGGGTGGGAACAACAAAGGCAATGGTGAAAAGAGAT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAAATCTTGATCCCAGCTaGAAACTTGCAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRNLDPS*KLARVG
Trigger: TCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAATCTTTCGAAGCCACTaGATGTTGGATAGGCTATTG +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRIFRSH*MLDRLL
Trigger: CAATAGCCTATCCAACATCCAGTGGCTTCGAAAGAT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTGGCGAATTGTATCATaGCCATGTAAGAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKWRIVS*PCKSRV
Trigger: CACCCTACTCTTACATGGCCATGATACAATTCGCCA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTTTCTCCTCTTTCCCTaGTCCTGCAGAAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNFLLFP*SCRRKR
Trigger: CCTCTTTCTTCTGCAGGACCAGGGAAAGAGGAGAAA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAAGCTCAGGAATAAACTaGGACCAGTTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSSGIN*DQLMLS
Trigger: TGACAACATCAACTGGTCCCAGTTTATTCCTGAGCT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGATCCTACCCACCTTCTaGCAGTCTCTGGATAATGAT +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKILPTF*QSLDND
Trigger: ATCATTATCCAGAGACTGCCAGAAGGTGGGTAGGAT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCTCCCTGGTATGATTaGGGACATTATCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSPWYD*GHYQRN
Trigger: GTTTCTCTGATAATGTCCCCAATCATACCAGGGAGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGAATCCTCCCAGGAGTaGGATGATTCCTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNESSQE*DDSSLK
Trigger: TTTCAAAGAGGAATCATCTCACTCCTGGGAGGATTC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTTGGGCATGGTGGGGTaGTTAATAATCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNLGMVG*LIILIP
Trigger: TGGGATCAAGATTATTAACCACCCCACCATGCCCAA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTGGCGAATTGTATCATaGCCATGTAAGAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNWRIVS*PCKSRV
Trigger: CACCCTACTCTTACATGGCCATGATACAATTCGCCA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp CTCAATCCACGTATAGATGTCTTTCAAAGTCATGCGCTTCCTCTCAGTGCTGTTTGGCGAATTGTATCATaGCCATGTAAGAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LNPRIDVFQSHALPLSAVWRIVS*PCKSRV
Trigger: CACCCTACTCTTACATGGCCATGATACAATTCGCCA...AACAGCACTGAGAGGAAGCGCATGACTTTGAAAGACATCTATACGTGGATTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CCA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGAGCTCAGGAATAAACTaGGACCAGTTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKSSGIN*DQLMLS
Trigger: TGACAACATCAACTGGTCCCAGTTTATTCCTGAGCT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAATCTTGATCCCAGCTaGAAACTTGCAAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNNLDPS*KLARVG
Trigger: TCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAGCTCAGGAATAAACTaGGACCAGTTGATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNSSGIN*DQLMLS
Trigger: TGACAACATCAACTGGTCCCAGTTTATTCCTGAGCT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR TCA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCACCTTCGCTTTTATTaGGTAGTTAGTGTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: EETVHCRSSLLSKLKARNHLRFY*VVSVLK
Trigger: CTTGAGAACACTAACTACTCAATAAAAGCGAAGGTG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCCAGTCCCCCTACTTaGGCTGGGGGCGTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSSPPT*AGGVSL
Trigger: GAGGCTCACGCCCCCAGCCAAAGTAGGGGGACTGGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS TCA 90 bp CACCTTGGGGGCAATGCGGACTCGCTTGCTATGGCGGGCAAGCTCTaGGCTCATGAGGGAAGCCGCCAGGGGCAATGGCACCTTCACCGA +
Preference number: 5 (lower is better)
Translates to: HLGGNADSLAMAGKL*AHEGSRQGQWHLHR
Trigger: TCGGTGAAGGTGCCATTGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000366362.3
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCCGTGCGCCCAGGGGGAGTTCGGGCATCATAGCTGGTTaGGGTTTGAGGCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LTRGSSGFIFRRAPRGSSGIIAG*GLRPES
Trigger: GGACTCCGGCCTCAAACCCAAACCAGCTATGATGCC...CGAACTCCCCCTGGGCGCACGGCGGAAGATGAAGCCACTGCTACCACGGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCCAGTCCCCCTACTTaGGCTGGGGGCGTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSSPPT*AGGVSL
Trigger: GAGGCTCACGCCCCCAGCCAAAGTAGGGGGACTGGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCAGCTAGCAGCACCTaGGGGGCAATGCGGACTCGC +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASASST*GAMRTR
Trigger: GCGAGTCCGCATTGCCCCCAAGGTGCTGCTAGCTGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS TCA 90 bp AACCTTGGGGGCAATGCGGACTCGCTTGCTATGGCGGGCAAGCTCTaGGCTCATGAGGGAAGCCGCCAGGGGCAATGGCACCTTCACCGA +
Preference number: 5 (lower is better)
Translates to: NLGGNADSLAMAGKL*AHEGSRQGQWHLHR
Trigger: TCGGTGAAGGTGCCATTGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342628.6
CDS CCA 90 bp TCCTCAGCTAGCAGCACCTTGGGGGCAATGCGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTCATGAGGGAAGCCGCCAGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: SSASSTLGAMRTRLL*RASSELMREAARGN
Trigger: ATTGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGCTGCTAGCTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGGCAGCCTCCGTCTTTaGAGAATCAGTGGCCGACGG +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGGSLRL*RISGRR
Trigger: CCGTCGGCCACTGATTCTCAAAAGACGGAGGCTGCC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGCAATGCGGACTCGCTaGCTATGGCGGGCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPAMRTR*LWRASS
Trigger: AGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCTGGGGAGGACAGATTaGCTCGGGGTGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGLGRTD*LGVEEM
Trigger: CATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCAG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTCCGGGGAGCCTGGCTaGGGGACGTCTATATCTGAG +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSGEPG*GTSISE
Trigger: CTCAGATATAGACGTCCCCAAGCCAGGCTCCCCGGA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCCGGGGAGCCTGGCTaGGGGACGTCTATATCTGAG +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASGEPG*GTSISE
Trigger: CTCAGATATAGACGTCCCCAAGCCAGGCTCCCCGGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSSLRG*GCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS GCA 90 bp CTCATGAGGGAAGCCGCCAGGGGCAATGGCACCTTCACCGAGGGCTaGAACACCAGTGACTGGTTCACCGGGAACTGGATAGGTACCAGG +
Preference number: 5 (lower is better)
Translates to: LMREAARGNGTFTEG*NTSDWFTGNWIGTR
Trigger: CCTGGTACCTATCCAGTTCCCGGTGAACCAGTCACTGGTGTTGCAGCCCTCGGTGAAGGTGCCATTGCCCCTGGCGGCTTCCCTCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000366362.3
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS GCA 90 bp CCCAGAACAAGGACCAGGCCCAAGGCCCACTCTCCCATACTAACGTaGGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PRTRTRPKAHSPILT*AQGEFGFDGHVPAE
Trigger: CTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGTTAGTATGGGAGAGTGGGCCTTGGGCCTGGTCCTTGTTCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGCCACTACTTGCGTGTaGGGCATGGTGGGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGATTCV*GMVGWL
Trigger: TAACCACCCCACCATGCCCAACACGCAAGTAGTGGC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTATAGCTGGTTTGGGTTaGAGGCCGGAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPIAGLG*RPESWR
Trigger: CCTCCAGGACTCCGGCCTCAAACCCAAACCAGCTAT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGGCATCATAGCTGGTTaGGGTTTGAGGCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGGIIAG*GLRPES
Trigger: GGACTCCGGCCTCAAACCCAAACCAGCTATGATGCC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCCTCCATCTCTTGCTaGATGCTGCGGGAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASSISC*MLREPS
Trigger: ACTGGGCTCCCGCAGCATCAAGCAAGAGATGGAGGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGTCCAGAAGGAGACCTaGCCATTGGCAGACGTCTCC +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGVQKET*PLADVS
Trigger: GGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGAC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCTTGGGGTGGGAGATaGGGACGAATCCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSWGGR*GRILPG
Trigger: TCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCTGGGGAGGACAGATTaGCTCGGGGTGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALLGRTD*LGVEEM
Trigger: CATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCAG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGGGACCAGTTGATGTaGTCAGGGCCCAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALWDQLM*SGPSGS
Trigger: GGACCCACTGGGCCCTGACAACATCAACTGGTCCCA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSSLRG*GCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCACACTCTGCTTCAGTaGCATCCATCCTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAHTLLQ*HPSSHP
Trigger: GGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGCACACTCTGCTTCAGTaGCATCCATCCTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGHTLLQ*HPSSHP
Trigger: GGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTG...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGGGGATGGCCACTACTaGCGTGTTGGGCATGGTGGG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWGDGHY*RVGHGG
Trigger: CCCACCATGCCCAACACGCAAGTAGTGGCCATCCCC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCCTCCATCTCTTGCTaGATGCTGCGGGAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSSISC*MLREPS
Trigger: ACTGGGCTCCCGCAGCATCAAGCAAGAGATGGAGGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTAAGGAGACCTTGCCATaGGCAGACGTCTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALKETLP*ADVSRT
Trigger: TGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCTT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGTCCAGAAGGAGACCTaGCCATTGGCAGACGTCTCC +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALVQKET*PLADVS
Trigger: GGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGAC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGGAGGGCTCTCCACTTaGATGGGTCTCGCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPGGLST*MGLAKC
Trigger: ACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTCC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGGAGGGCTCTCCACTTaGATGGGTCTCGCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAGGLST*MGLAKC
Trigger: ACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTCC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATCCAGTCCCCCTACTTaGGCTGGGGGCGTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSSPPT*AGGVSL
Trigger: GAGGCTCACGCCCCCAGCCAAAGTAGGGGGACTGGA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCTGAGGGAGAAGAGTaGCCAAAGGGGACGGAGATG +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSEGEE*PKGTEM
Trigger: CATCTCCGTCCCCTTTGGCAACTCTTCTCCCTCAGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTGGGACCAGTTGATGTaGTCAGGGCCCAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSWDQLM*SGPSGS
Trigger: GGACCCACTGGGCCCTGACAACATCAACTGGTCCCA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS GCA 90 bp TCTGAGAAGAGCAGCTCCGGCTCATCCACACAGGGAGGCAGTAGATaGTGTTTTCTCCGAGACCGGCTCCTCTCCCTCCTCTCCCTGTGT +
Preference number: 5 (lower is better)
Translates to: SEKSSSGSSTQGGSR*CFLRDRLLSLLSLC
Trigger: ACACAGGGAGAGGAGGGAGAGGAGCCGGTCTCGGAGAAAACAGCATCTACTGCCTCCCTGTGTGGATGAGCCGGAGCTGCTCTTCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CCA 90 bp AGCACAGGGGCAAGGGCAGGGCTCTACTGTAGCTCAGGAATAAACTaGGACCAGTTGATGTTGTCAGGGCCCAGTGGGTCCTCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: STGARAGLYCSSGIN*DQLMLSGPSGSSSR
Trigger: CCTGGACGAGGACCCACTGGGCCCTGACAACATCAACTGGTCCCAGTTTATTCCTGAGCTACAGTAGAGCCCTGCCCTTGCCCCTGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTATCCCAGCTGGAAACTaGCAAGAGTTGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPIPAGN*QELDSA
Trigger: GGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGAT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTCCACTCTCTTTTCCCTaGGCAGTCAGTGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPPLSFP*AVSAVM
Trigger: CATCACAGCACTGACTGCCAAGGGAAAAGAGAGTGG...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCATAGCTGGTTTGGGTTaGAGGCCGGAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSIAGLG*RPESWR
Trigger: CCTCCAGGACTCCGGCCTCAAACCCAAACCAGCTAT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGCAATGCGGACTCGCTaGCTATGGCGGGCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWAMRTR*LWRASS
Trigger: AGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCTGGGGAGGACAGATTaGCTCGGGGTGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLGRTD*LGVEEM
Trigger: CATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCAG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTCTGAGGGAGAAGAGTaGCCAAAGGGGACGGAGATG +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALSEGEE*PKGTEM
Trigger: CATCTCCGTCCCCTTTGGCAACTCTTCTCCCTCAGA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTTCTGTCAGAGAACGATaGGCTGCAAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPSVRER*AARPET
Trigger: GGTTTCTGGCCTTGCAGCCAATCGTTCTCTGACAGA...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTCTGTCAGAGAACGATaGGCTGCAAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGSVRER*AARPET
Trigger: GGTTTCTGGCCTTGCAGCCAATCGTTCTCTGACAGA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCTGTCAGAGAACGATaGGCTGCAAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASVRER*AARPET
Trigger: GGTTTCTGGCCTTGCAGCCAATCGTTCTCTGACAGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTTCACCATTGCCTTTGTaGTTCCCACCCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKASPLPL*FPPFSS
Trigger: GGAGCTGAAGGGTGGGAACAACAAAGGCAATGGTGA...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATCAGCTAGCAGCACCTaGGGGGCAATGCGGACTCGC +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSASST*GAMRTR
Trigger: GCGAGTCCGCATTGCCCCCAAGGTGCTGCTAGCTGA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS TCA 90 bp GTAAGAGTAGGGTGGCCGCTCAGACACAGAGTTCTGCCAGGACGCTaGTGGTCTCGAAGGCTCCTCAACCTTAACCTGTCGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: VRVGWPLRHRVLPGR*WSRRLLNLNLSLLQ
Trigger: CTGGAGCAGCGACAGGTTAAGGTTGAGGAGCCTTCGAGACCATCAGCGTCCTGGCAGAACTCTGTGTCTGAGCGGCCACCCTACTCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
ENST00000627656.2
CDS TCA 90 bp TGGGAGATTGGGACGAATCCTCCCAGGAGTGAGATGATTCCTCTTTaGAAGATGGGGCCGGGGAGGGCCACTCTTCCAAGGGAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: WEIGTNPPRSEMIPL*KMGPGRATLPREGS
Trigger: AGAGCCCTCCCTTGGAAGAGTGGCCCTCCCCGGCCCCATCTTTCAAAGAGGAATCATCTCACTCCTGGGAGGATTCGTCCCAATCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS TCA 90 bp GTAAGAGTAGGGTGGCCGCTCAGACACAGAGTTCTGCCAGGACGCTaGTGGTCTCGAAGGCTCCTCAACCACAGGTCTCCCGTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: VRVGWPLRHRVLPGR*WSRRLLNHRSPVSA
Trigger: AGCAGAAACGGGAGACCTGTGGTTGAGGAGCCTTCGAGACCATCAGCGTCCTGGCAGAACTCTGTGTCTGAGCGGCCACCCTACTCTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS CCA 90 bp GTCCCAAGGTCTCCAGGGTCACTTCTGTCCTTTTGGCATCATAGCTaGTTTGGGTTTGAGGCCGGAGTCCTGGAGGCTGAGTTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: VPRSPGSLLSFWHHS*FGFEAGVLEAELGL
Trigger: GAGCCCCAACTCAGCCTCCAGGACTCCGGCCTCAAACCCAAACCAGCTATGATGCCAAAAGGACAGAAGTGACCCTGGAGACCTTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGTTGATTAGACTCCTGTaGGGCAGGGGATCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGLIRLL*GRGSLR
Trigger: CCTAAGAGATCCCCTGCCCAACAGGAGTCTAATCAA...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTTGGAGGCCTCTGCTaGATTAGACTCCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLGGLC*IRLLLG
Trigger: GCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGCCACTACTTGCGTGTaGGGCATGGTGGGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWATTCV*GMVGWL
Trigger: TAACCACCCCACCATGCCCAACACGCAAGTAGTGGC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTATGAGGATGAATTTGTaGGGCCCACTACTGCCACTC +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPMRMNL*GPLLPL
Trigger: GAGTGGCAGTAGTGGGCCCAACAAATTCATCCTCAT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCTGATGAGGATGAATTaGTTGGGCCCACTACTGCCA +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKALMRMN*LGPLLP
Trigger: TGGCAGTAGTGGGCCCAACAAATTCATCCTCATCAG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGGCATCATAGCTGGTTaGGGTTTGAGGCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWGIIAG*GLRPES
Trigger: GGACTCCGGCCTCAAACCCAAACCAGCTATGATGCC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAAGGAGACCTTGCCATaGGCAGACGTCTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWKETLP*ADVSRT
Trigger: TGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCTT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAGGGGGAGTTCGGTTTaGATGGTCATGTTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWRGSSV*MVMFRR
Trigger: CCGCCGGAACATGACCATCAAAACCGAACTCCCCCT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGGAGGGCTCTCCACTTaGATGGGTCTCGCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSGGLST*MGLAKC
Trigger: ACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTCC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAGGACTTCTTGGGTCTaGGGGTGGGAGATTGGGACG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWRTSWV*GWEIGT
Trigger: CGTCCCAATCTCCCACCCCAAGACCCAAGAAGTCCT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCACACTCTGCTTCAGTaGCATCCATCCTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWHTLLQ*HPSSHP
Trigger: GGGGTGGGAGGATGGATGCAACTGAAGCAGAGTGTG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS TCA 90 bp TGCTGTTTTCTCCGAGACCGGCTCCTCTCCCTCCTCTCCCTGTGTTaGATCACAAGCATTTCCGAGACACACCGGGTTGGGGACCTAAGC +
Preference number: 5 (lower is better)
Translates to: CCFLRDRLLSLLSLC*ITSISETHRVGDLS
Trigger: GCTTAGGTCCCCAACCCGGTGTGTCTCGGAAATGCTTGTGATTCAACACAGGGAGAGGAGGGAGAGGAGCCGGTCTCGGAGAAAACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCTTGGAGGCCTCTGCTaGATTAGACTCCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLGGLC*IRLLLG
Trigger: GCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTGGAAACTTGCAAGAGTaGGACTCTGCCACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALGNLQE*DSATSL
Trigger: CAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCC...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCATCCCAGCTGGAAACTaGCAAGAGTTGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSIPAGN*QELDSA
Trigger: GGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGAT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGCCACTACTTGCGTGTaGGGCATGGTGGGGTGGTTA +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVATTCV*GMVGWL
Trigger: TAACCACCCCACCATGCCCAACACGCAAGTAGTGGC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACACCTGGTCCAATGTATAGCTGGTTTGGGTTaGAGGCCGGAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PAELWIRSFLLLKHLVQCIAGLG*RPESWR
Trigger: CCTCCAGGACTCCGGCCTCAAACCCAAACCAGCTAT...ACATTGGACCAGGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGGCATCATAGCTGGTTaGGGTTTGAGGCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVGIIAG*GLRPES
Trigger: GGACTCCGGCCTCAAACCCAAACCAGCTATGATGCC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCTTTTCCTCCATCTCTaGCTTGATGCTGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLFLHL*LDAAGA
Trigger: GGCTCCCGCAGCATCAAGCAAGAGATGGAGGAAAAG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGGATAGGTACCAGGTATGAGCTGACCCGTGGTAGCAGTGGCTTCATCTTCCGCAAGGAGACCTTGCCATaGGCAGACGTCTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: WIGTRYELTRGSSGFIFRKETLP*ADVSRT
Trigger: TGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCTT...GCGGAAGATGAAGCCACTGCTACCACGGGTCAGCTCATACCTGGTACCTATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTCCTCCTCTCCCTGTGTaGAATCACAAGCATTTCCGA +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALPPLPV*NHKHFR
Trigger: TCGGAAATGCTTGTGATTCAACACAGGGAGAGGAGG...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTCTGAGGGAGAAGAGTaGCCAAAGGGGACGGAGATG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWSEGEE*PKGTEM
Trigger: CATCTCCGTCCCCTTTGGCAACTCTTCTCCCTCAGA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTCTGTCAGAGAACGATaGGCTGCAAGGCCAGAAACC +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSSVRER*AARPET
Trigger: GGTTTCTGGCCTTGCAGCCAATCGTTCTCTGACAGA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CCA 90 bp CTCTGGGCTCAGATCCCTTTGAGGTGGGAACAGAATCCCAGAGTCTaGTTCCCTAAAGATATGGCCCCAGAACAAGGACCAGGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LWAQIPLRWEQNPRV*FPKDMAPEQGPGPR
Trigger: CCTTGGGCCTGGTCCTTGTTCTGGGGCCATATCTTTAGGGAACCAGACTCTGGGATTCTGTTCCCACCTCAAAGGGATCTGAGCCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS CCA 90 bp GCCCAGGGGGAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTGCTGCTTAAACACCTGGTCCAATGT +
Preference number: 5 (lower is better)
Translates to: AQGEFGFDGHVPAEL*IRSFLLLLKHLVQC
Trigger: ACATTGGACCAGGTGTTTAAGCAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCGTTTTCACTCTCCATaGAGAATCACAAGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKARFHSP*RITSVD
Trigger: GTCCACACTTGTGATTCTCAATGGAGAGTGAAAACG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTTCACTTGGGGCATTTaGAACAGGAAGGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWFTWGI*NRKGQP
Trigger: AGGCTGCCCCTTCCTGTTCAAAATGCCCCAAGTGAA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCCTCTGATGTTTCACTaGGGGCATTTTGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAPLMFH*GHFEQE
Trigger: TTCCTGTTCAAAATGCCCCAAGTGAAACATCAGAGG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTTGATTAGACTCCTGTaGGGCAGGGGATCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLIRLL*GRGSLR
Trigger: CCTAAGAGATCCCCTGCCCAACAGGAGTCTAATCAA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGAGGGGGGGTGGTTAATAATCTaGATCCCAGCTGGAAACTTG +
Preference number: 5 (lower is better)
Translates to: SHPCGQLGPRVALCKAEGGWLII*IPAGNL
Trigger: CAAGTTTCCAGCTGGGATCAAGATTATTAACCACCC...CCCCTCAGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGGGGATGGCCACTACTaGCGTGTTGGGCATGGTGGG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCGDGHY*RVGHGG
Trigger: CCCACCATGCCCAACACGCAAGTAGTGGCCATCCCC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCCACTCTCTTTTCCCTaGGCAGTCAGTGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWPLSFP*AVSAVM
Trigger: CATCACAGCACTGACTGCCAAGGGAAAAGAGAGTGG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGATGAGGATGAATTaGTTGGGCCCACTACTGCCA +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSLMRMN*LGPLLP
Trigger: TGGCAGTAGTGGGCCCAACAAATTCATCCTCATCAG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTATGTTGGATAGGCTATaGTTGATAGTGCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPMLDRL*LIVQPA
Trigger: AGCAGGCTGCACTATCAACAATAGCCTATCCAACAT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTCGAAGCCACTGGATGTaGGATAGGCTATTGTTGATA +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKARSHWM*DRLLLI
Trigger: TATCAACAATAGCCTATCCAACATCCAGTGGCTTCG...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTGCAAAGCTGCTGTTGATGGCGAATaGTATCATGGCCATGTAAGA +
Preference number: 5 (lower is better)
Translates to: AGSHPCGQLGPRVALCKAAVDGE*YHGHVR
Trigger: TCTTACATGGCCATGATACAATTCGCCATCAACAGC...AGCTTTGCAAAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTGCTGTTGATGGCGAATaGTATCATGGCCATGTAAGA +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPAVDGE*YHGHVR
Trigger: TCTTACATGGCCATGATACAATTCGCCATCAACAGC...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCCTCCTCTCCCTGTGTaGAATCACAAGCATTTCCGA +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSPPLPV*NHKHFR
Trigger: TCGGAAATGCTTGTGATTCAACACAGGGAGAGGAGG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCCAGTCCCCCTACTTaGGCTGGGGGCGTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSSPPT*AGGVSL
Trigger: GAGGCTCACGCCCCCAGCCAAAGTAGGGGGACTGGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATCTGAGGGAGAAGAGTaGCCAAAGGGGACGGAGATG +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVSEGEE*PKGTEM
Trigger: CATCTCCGTCCCCTTTGGCAACTCTTCTCCCTCAGA...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCAGGAATCAGATACTCTaGGGGAACACAAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSRNQIL*GNTRSQ
Trigger: CTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCCT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTCACCATTGCCTTTGTaGTTCCCACCCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWSPLPL*FPPFSS
Trigger: GGAGCTGAAGGGTGGGAACAACAAAGGCAATGGTGA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGGCAAGCTAAGGAAGCCAGGCAGGTCAGGGGCCCTTTCGGCCTTCTCAAGCCTAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 5 (lower is better)
Translates to: GQAKEARQVRGPFGLLKPNLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...AGGCTTGAGAAGGCCGAAAGGGCCCCTGACCTGCCTGGCTTCCTTAGCTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CCA 90 bp ACCATCTGCACAGGTCTCCCGTTTCTGCTCGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATCCCTAGCTGCAGGTTTTGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: TICTGLPFLLAKGSR*SRKIHIPSCRFWSQ
Trigger: TTGGGACCAAAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTGTGCAGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
CDS CCA 90 bp CCCAGGAGCTTTGCTCTCCTTCTCTGGGCTCAGATCCCTTTGAGGTaGGAACAGAATCCCAGAGTCTGGTTCCCTAAAGATATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: PRSFALLLWAQIPLR*EQNPRVWFPKDMAP
Trigger: TGGGGCCATATCTTTAGGGAACCAGACTCTGGGATTCTGTTCCCACCTCAAAGGGATCTGAGCCCAGAGAAGGAGAGCAAAGCTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS CCA 90 bp TCCTCAACCACAGGTCTCCCGTTTCTGCTCGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATCCCTAGCTGCAGGTTTTGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: SSTTGLPFLLAKGSR*SRKIHIPSCRFWSQ
Trigger: TTGGGACCAAAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTGTGGTTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS CCA 90 bp CTCACCATCACAGGTCTCCCGTTTCTGCTCGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATCCCTAGCTGCAGGTTTTGGTCCCAA +
Preference number: 5 (lower is better)
Translates to: LTITGLPFLLAKGSR*SRKIHIPSCRFWSQ
Trigger: TTGGGACCAAAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTGTGATGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTTGATTAGACTCCTGTaGGGCAGGGGATCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWLIRLL*GRGSLR
Trigger: CCTAAGAGATCCCCTGCCCAACAGGAGTCTAATCAA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAATCCCAGCTGGAAACTaGCAAGAGTTGGACTCTGCC +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVIPAGN*QELDSA
Trigger: GGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGAT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGGGATGGCCACTACTaGCGTGTTGGGCATGGTGGG +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGDGHY*RVGHGG
Trigger: CCCACCATGCCCAACACGCAAGTAGTGGCCATCCCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTATGTTGGATAGGCTATaGTTGATAGTGCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALMLDRL*LIVQPA
Trigger: AGCAGGCTGCACTATCAACAATAGCCTATCCAACAT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTTTCCTCTCAGTGCTGTaGATGGCGAATTGTATCATG +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALFLSVL*MANCIM
Trigger: CATGATACAATTCGCCATCAACAGCACTGAGAGGAA...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAACACCTGGTCCAATGTCAAGTAGCGGTTGGCACTGGGGTGAATGGTCCAGAAGTCCAGAAGGAGACCTaGCCATTGGCAGACGTCTCC +
Preference number: 5 (lower is better)
Translates to: KHLVQCQVAVGTGVNGPEVQKET*PLADVS
Trigger: GGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGAC...TTCTGGACCATTCACCCCAGTGCCAACCGCTACTTGACATTGGACCAGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp TTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACAGGGGGAGTTCGGTTTaGATGGTCATGTTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: LMVMFRRSSGFGRFCCLNRGSSV*MVMFRR
Trigger: CCGCCGGAACATGACCATCAAAACCGAACTCCCCCT...GTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGCAATGCGGACTCGCTaGCTATGGCGGGCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCAMRTR*LWRASS
Trigger: AGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCCTCCTCTCCCTGTGTaGAATCACAAGCATTTCCGA +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWPPLPV*NHKHFR
Trigger: TCGGAAATGCTTGTGATTCAACACAGGGAGAGGAGG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCTGGGGAGGACAGATTaGCTCGGGGTGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCLGRTD*LGVEEM
Trigger: CATCTCCTCCACCCCGAGCAAATCTGTCCTCCCCAG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTCCGGGGAGCCTGGCTaGGGGACGTCTATATCTGAG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSGEPG*GTSISE
Trigger: CTCAGATATAGACGTCCCCAAGCCAGGCTCCCCGGA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCATGTCCAGCAGGATCTaGCTGAGGCTGTCATTCATT +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSMSSRI*LRLSFI
Trigger: AATGAATGACAGCCTCAGCAAGATCCTGCTGGACAT...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTGGGACCAGTTGATGTaGTCAGGGCCCAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCWDQLM*SGPSGS
Trigger: GGACCCACTGGGCCCTGACAACATCAACTGGTCCCA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTCCTCACTCAGAGGCTaGGGGTGCACTGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSSLRG*GCTEPW
Trigger: CCAAGGCTCAGTGCACCCCAAGCCTCTGAGTGAGGA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALNLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TGTTCTCAAGCTGGCTCACACCCATGCGGTCAGCTGGGGCCTAGGGTGGCTCTTACCGGAGCTTTCAGTTaGTTCCGCTGTTTGAAATTG +
Preference number: 5 (lower is better)
Translates to: CSQAGSHPCGQLGPRVALTGAFS*FRCLKL
Trigger: CAATTTCAAACAGCGGAACAAACTGAAAGCTCCGGT...AAGAGCCACCCTAGGCCCCAGCTGACCGCATGGGTGTGAGCCAGCTTGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359843.8
CDS TCA 90 bp TCAGCCCCAGGAGCTTTGCTCTCCTTCTCTGGGCTCAGATCCCTTTaGGGTGGGAACAGAATCCCAGAGTCTGGTTCCCTAAAGATATGG +
Preference number: 5 (lower is better)
Translates to: SAPGALLSFSGLRSL*GGNRIPESGSLKIW
Trigger: CCATATCTTTAGGGAACCAGACTCTGGGATTCTGTTCCCACCTCAAAGGGATCTGAGCCCAGAGAAGGAGAGCAAAGCTCCTGGGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS GCA 90 bp CTCGCAAAGGGCTCCAGGTGGTCTAGGAAGATTCACATCCCTAGCTaGAGGTTTTGGTCCCAAGGTCTCCAGGGTCACTTCTGTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LAKGSRWSRKIHIPS*RFWSQGLQGHFCPF
Trigger: AAAAGGACAGAAGTGACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS GCA 90 bp ACAGCACTGGAGAGACTGTCAGGCTGGGCTGACCTTGATTTTGGTTaGTGTGGGACACATTACCTTCCAGCCTGGCTTGGCAATGTGCTT +
Preference number: 5 (lower is better)
Translates to: TALERLSGWADLDFG*CGTHYLPAWLGNVL
Trigger: AAGCACATTGCCAAGCCAGGCTGGAAGGTAATGTGTCCCACAGCAACCAAAATCAAGGTCAGCCCAGCCTGACAGTCTCTCCAGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545049.1
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCCTCTGATGTTTCACTaGGGGCATTTTGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSPLMFH*GHFEQE
Trigger: TTCCTGTTCAAAATGCCCCAAGTGAAACATCAGAGG...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGGGGATGGCCACTACTaGCGTGTTGGGCATGGTGGG +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKGDGHY*RVGHGG
Trigger: CCCACCATGCCCAACACGCAAGTAGTGGCCATCCCC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCGCTGTTGATGGCGAATaGTATCATGGCCATGTAAGA +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSAVDGE*YHGHVR
Trigger: TCTTACATGGCCATGATACAATTCGCCATCAACAGC...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGCCCTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCTTCCTCTCAGTGCTGTaGATGGCGAATTGTATCATG +
Preference number: 5 (lower is better)
Translates to: GPFGLLKPPPEFSSMPVSFLSVL*MANCIM
Trigger: CATGATACAATTCGCCATCAACAGCACTGAGAGGAA...GGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAAGGAGACCTTGCCATaGGCAGACGTCTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCKETLP*ADVSRT
Trigger: TGTCCGGGAGACGTCTGCCAATGGCAAGGTCTCCTT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGGGGGAGTTCGGTTTaGATGGTCATGTTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRGSSV*MVMFRR
Trigger: CCGCCGGAACATGACCATCAAAACCGAACTCCCCCT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCTCTTGGGGTGGGAGATaGGGACGAATCCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSWGGR*GRILPG
Trigger: TCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAGA...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGGACTTCTTGGGTCTaGGGGTGGGAGATTGGGACG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRTSWV*GWEIGT
Trigger: CGTCCCAATCTCCCACCCCAAGACCCAAGAAGTCCT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATGGGACCAGTTGATGTaGTCAGGGCCCAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRWDQLM*SGPSGS
Trigger: GGACCCACTGGGCCCTGACAACATCAACTGGTCCCA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS GCA 90 bp TGGAAACTTGCAAGAGTTGGACTCTGCCACTTCCTTGGAGGCCTCTaGTTGATTAGACTCCTGTTGGGCAGGGGATCTCTTAGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: WKLARVGLCHFLGGL*LIRLLLGRGSLRFL
Trigger: GAGGAACCTAAGAGATCCCCTGCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CCA 90 bp TTGCGTGTTGGGCATGGTGGGGTGGTTAATAATCTTGATCCCAGCTaGAAACTTGCAAGAGTTGGACTCTGCCACTTCCTTGGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LRVGHGGVVNNLDPS*KLARVGLCHFLGGL
Trigger: GAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATTATTAACCACCCCACCATGCCCAACACGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CCA 90 bp GGCTCCAGGTGGTCTAGGAAGATTCACATCCCTAGCTGCAGGTTTTaGTCCCAAGGTCTCCAGGGTCACTTCTGTCCTTTTGGCATCATA +
Preference number: 5 (lower is better)
Translates to: GSRWSRKIHIPSCRF*SQGLQGHFCPFGII
Trigger: TATGATGCCAAAAGGACAGAAGTGACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCACCTGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGCGTTTTCACTCTCCATaGAGAATCACAAGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWRFHSP*RITSVD
Trigger: GTCCACACTTGTGATTCTCAATGGAGAGTGAAAACG...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGGGGTGGTTAATAATCTaGATCCCAGCTGGAAACTTG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWGWLII*IPAGNL
Trigger: CAAGTTTCCAGCTGGGATCAAGATTATTAACCACCC...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp ATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTAAACACCATGAGGATGAATTTGTaGGGCCCACTACTGCCACTC +
Preference number: 5 (lower is better)
Translates to: MVMFRRSSGFGRFCCLNTMRMNL*GPLLPL
Trigger: GAGTGGCAGTAGTGGGCCCAACAAATTCATCCTCAT...GGTGTTTAAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCCTCCATCTCTTGCTaGATGCTGCGGGAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSSISC*MLREPS
Trigger: ACTGGGCTCCCGCAGCATCAAGCAAGAGATGGAGGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTTCCTCTCAGTGCTGTaGATGGCGAATTGTATCATG +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWFLSVL*MANCIM
Trigger: CATGATACAATTCGCCATCAACAGCACTGAGAGGAA...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCAAGTGCTCGGGCAATaGTGGAGACCCTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLQVLGQ*WRPWVQ
Trigger: CTGGACCCAGGGTCTCCACAATTGCCCGAGCACTTG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGCAATGCGGACTCGCTaGCTATGGCGGGCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKAMRTR*LWRASS
Trigger: AGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCGGAGGGCTCTCCACTTaGATGGGTCTCGCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCGGLST*MGLAKC
Trigger: ACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTCC...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATCTTGGGGTGGGAGATaGGGACGAATCCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRSWGGR*GRILPG
Trigger: TCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAGA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGTCCGGGGAGCCTGGCTaGGGGACGTCTATATCTGAG +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLSGEPG*GTSISE
Trigger: CTCAGATATAGACGTCCCCAAGCCAGGCTCCCCGGA...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAATGTCCAGCAGGATCTaGCTGAGGCTGTCATTCATT +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVMSSRI*LRLSFI
Trigger: AATGAATGACAGCCTCAGCAAGATCCTGCTGGACAT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTTTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGAGGAACAGAAGTCAATaGAAACCCCAGGTCATCCTA +
Preference number: 5 (lower is better)
Translates to: LSAFSSLHLSSRQCQSPWRNRSQ*KPQVIL
Trigger: TAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCT...CCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCAGTTTGTTCCGCTGTTaGAAATTGGCGCCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCSLFRC*KLAPAE
Trigger: CTCCGCCGGCGCCAATTTCAAACAGCGGAACAAACT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359843.8
CDS TCA 90 bp CTGCCACTCTCTTTTCCCTTGGCAGTCAGTGCTGTGATGATGCTGTaGATATTAGCATTGTTGGGGATGGCCACTACTTGCGTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: LPLSFPLAVSAVMML*ILALLGMATTCVLG
Trigger: GCCCAACACGCAAGTAGTGGCCATCCCCAACAATGCTAATATTCACAGCATCATCACAGCACTGACTGCCAAGGGAAAAGAGAGTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CCA 90 bp GCATTGTTGGGGATGGCCACTACTTGCGTGTTGGGCATGGTGGGGTaGTTAATAATCTTGATCCCAGCTGGAAACTTGCAAGAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: ALLGMATTCVLGMVG*LIILIPAGNLQELD
Trigger: GTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATTATTAACCACCCCACCATGCCCAACACGCAAGTAGTGGCCATCCCCAACAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTACCTCTGATGTTTCACTaGGGGCATTTTGAACAGGAA +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVPLMFH*GHFEQE
Trigger: TTCCTGTTCAAAATGCCCCAAGTGAAACATCAGAGG...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAGGGTGGTTAATAATCTaGATCCCAGCTGGAAACTTG +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVGWLII*IPAGNL
Trigger: CAAGTTTCCAGCTGGGATCAAGATTATTAACCACCC...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCCACTCTCTTTTCCCTaGGCAGTCAGTGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCPLSFP*AVSAVM
Trigger: CATCACAGCACTGACTGCCAAGGGAAAAGAGAGTGG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GATGGCGAATTGTATCATGGCCATGTAAGAGTAGGGTGGCCGCTCAGACACAGACTGATGAGGATGAATTaGTTGGGCCCACTACTGCCA +
Preference number: 5 (lower is better)
Translates to: DGELYHGHVRVGWPLRHRLMRMN*LGPLLP
Trigger: TGGCAGTAGTGGGCCCAACAAATTCATCCTCATCAG...TCTGTGTCTGAGCGGCCACCCTACTCTTACATGGCCATGATACAATTCGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGATAGCTGGTTTGGGTTaGAGGCCGGAGTCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKIAGLG*RPESWR
Trigger: CCTCCAGGACTCCGGCCTCAAACCCAAACCAGCTAT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGGGCATCATAGCTGGTTaGGGTTTGAGGCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLGIIAG*GLRPES
Trigger: GGACTCCGGCCTCAAACCCAAACCAGCTATGATGCC...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCAAGTGCTCGGGCAATaGTGGAGACCCTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNQVLGQ*WRPWVQ
Trigger: CTGGACCCAGGGTCTCCACAATTGCCCGAGCACTTG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342628.6
ENST00000359843.8
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGAGGGGGAGTTCGGTTTaGATGGTCATGTTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRGSSV*MVMFRR
Trigger: CCGCCGGAACATGACCATCAAAACCGAACTCCCCCT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGAGGGGGAGTTCGGTTTaGATGGTCATGTTCCGGCGG +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKRGSSV*MVMFRR
Trigger: CCGCCGGAACATGACCATCAAAACCGAACTCCCCCT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGAGGACTTCTTGGGTCTaGGGGTGGGAGATTGGGACG +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRTSWV*GWEIGT
Trigger: CGTCCCAATCTCCCACCCCAAGACCCAAGAAGTCCT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGAGGACTTCTTGGGTCTaGGGGTGGGAGATTGGGACG +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKRTSWV*GWEIGT
Trigger: CGTCCCAATCTCCCACCCCAAGACCCAAGAAGTCCT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TTCGGCCTTCTCAAGCCTCCACCTGAGTTCTCGTCAATGCCAGTCTCCCTGGTAAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 5 (lower is better)
Translates to: FGLLKPPPEFSSMPVSLVNLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...TACCAGGGAGACTGGCATTGACGAGAACTCAGGTGGAGGCTTGAGAAGGCCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS GCA 90 bp GGTGTAAGCCACAGCGCCCGGCCAAATCCATCTCTTTCTAAGGCCTaGCTCCCTTGTGTATCTTCCTTAATAATCCTAGCCCATCTATCA +
Preference number: 5 (lower is better)
Translates to: GVSHSARPNPSLSKA*LPCVSSLIILAHLS
Trigger: TGATAGATGGGCTAGGATTATTAAGGAAGATACACAAGGGAGGCAGGCCTTAGAAAGAGATGGATTTGGCCGGGCGCTGTGGCTTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGATTCACTTGGGGCATTTaGAACAGGAAGGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRFTWGI*NRKGQP
Trigger: AGGCTGCCCCTTCCTGTTCAAAATGCCCCAAGTGAA...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTTGGAGGCCTCTGCTaGATTAGACTCCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLGGLC*IRLLLG
Trigger: GCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCTTGGAGGCCTCTGCTaGATTAGACTCCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKLGGLC*IRLLLG
Trigger: GCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACCACTCTCTTTTCCCTaGGCAGTCAGTGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRPLSFP*AVSAVM
Trigger: CATCACAGCACTGACTGCCAAGGGAAAAGAGAGTGG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCATGAGGATGAATTTGTaGGGCCCACTACTGCCACTC +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCMRMNL*GPLLPL
Trigger: GAGTGGCAGTAGTGGGCCCAACAAATTCATCCTCAT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGCTTTTCCTCCATCTCTaGCTTGATGCTGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKLFLHL*LDAAGA
Trigger: GGCTCCCGCAGCATCAAGCAAGAGATGGAGGAAAAG...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GGTTTTGATGGTCATGTTCCGGCGGAGCTCTGGATTCGGTCGTTTCTGCTGCTTGCTGTTGATGGCGAATaGTATCATGGCCATGTAAGA +
Preference number: 5 (lower is better)
Translates to: GFDGHVPAELWIRSFLLLAVDGE*YHGHVR
Trigger: TCTTACATGGCCATGATACAATTCGCCATCAACAGC...AAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACGTCCAGAAGGAGACCTaGCCATTGGCAGACGTCTCC +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNVQKET*PLADVS
Trigger: GGAGACGTCTGCCAATGGCAAGGTCTCCTTCTGGAC...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTCTTGGGGTGGGAGATaGGGACGAATCCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNSWGGR*GRILPG
Trigger: TCCTGGGAGGATTCGTCCCAATCTCCCACCCCAAGA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS GCA 90 bp GTTAATAATCTTGATCCCAGCTGGAAACTTGCAAGAGTTGGACTCTaGCACTTCCTTGGAGGCCTCTGCTTGATTAGACTCCTGTTGGGC +
Preference number: 5 (lower is better)
Translates to: VNNLDPSWKLARVGL*HFLGGLCLIRLLLG
Trigger: GCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATTATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CCA 90 bp GCTGACCTTGATTTTGGTTGCTGTGGGACACATTACCTTCCAGCCTaGCTTGGCAATGTGCTTAAAGTAGGGAAAGTGGTCCTCAATCCA +
Preference number: 5 (lower is better)
Translates to: ADLDFGCCGTHYLPA*LGNVLKVGKVVLNP
Trigger: TGGATTGAGGACCACTTTCCCTACTTTAAGCACATTGCCAAGCCAGGCTGGAAGGTAATGTGTCCCACAGCAACCAAAATCAAGGTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545049.1
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTTCACTTGGGGCATTTaGAACAGGAAGGGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKFTWGI*NRKGQP
Trigger: AGGCTGCCCCTTCCTGTTCAAAATGCCCCAAGTGAA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAGGAAACTTGCAAGAGTaGGACTCTGCCACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRGNLQE*DSATSL
Trigger: CAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCC...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAATGAGGATGAATTTGTaGGGCCCACTACTGCCACTC +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRMRMNL*GPLLPL
Trigger: GAGTGGCAGTAGTGGGCCCAACAAATTCATCCTCAT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACCTTTTCCTCCATCTCTaGCTTGATGCTGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNLFLHL*LDAAGA
Trigger: GGCTCCCGCAGCATCAAGCAAGAGATGGAGGAAAAG...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCATGTCCAGCAGGATCTaGCTGAGGCTGTCATTCATT +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCMSSRI*LRLSFI
Trigger: AATGAATGACAGCCTCAGCAAGATCCTGCTGGACAT...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAAGGAATCAGATACTCTaGGGGAACACAAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRRNQIL*GNTRSQ
Trigger: CTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCCT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCGTTTTCACTCTCCATaGAGAATCACAAGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRFHSP*RITSVD
Trigger: GTCCACACTTGTGATTCTCAATGGAGAGTGAAAACG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGTTGATTAGACTCCTGTaGGGCAGGGGATCTCTTAGG +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKLIRLL*GRGSLR
Trigger: CCTAAGAGATCCCCTGCCCAACAGGAGTCTAATCAA...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGGAAACTTGCAAGAGTaGGACTCTGCCACTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKGNLQE*DSATSL
Trigger: CAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGATGAGGATGAATTTGTaGGGCCCACTACTGCCACTC +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKMRMNL*GPLLPL
Trigger: GAGTGGCAGTAGTGGGCCCAACAAATTCATCCTCAT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCTGATGAGGATGAATTaGTTGGGCCCACTACTGCCA +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLLMRMN*LGPLLP
Trigger: TGGCAGTAGTGGGCCCAACAAATTCATCCTCATCAG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp TCAGAGAAACATCTAATAGCGCACATCTGGGCACCCACACTCTGCTTCAGTTGCCGAAGCCACTGGATGTaGGATAGGCTATTGTTGATA +
Preference number: 5 (lower is better)
Translates to: SEKHLIAHIWAPTLCFSCRSHWM*DRLLLI
Trigger: TATCAACAATAGCCTATCCAACATCCAGTGGCTTCG...GCAACTGAAGCAGAGTGTGGGTGCCCAGATGTGCGCTATTAGATGTTTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCCTCCTCTCCCTGTGTaGAATCACAAGCATTTCCGA +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLPPLPV*NHKHFR
Trigger: TCGGAAATGCTTGTGATTCAACACAGGGAGAGGAGG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGAATGTCCAGCAGGATCTaGCTGAGGCTGTCATTCATT +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRMSSRI*LRLSFI
Trigger: AATGAATGACAGCCTCAGCAAGATCCTGCTGGACAT...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CTGAGTTCTCGTCAATGCCAGTCTCCCTGGTATGATTGGGGACATTATCAGAGACGTTTTCACTCTCCATaGAGAATCACAAGTGTGGAC +
Preference number: 5 (lower is better)
Translates to: LSSRQCQSPWYDWGHYQRRFHSP*RITSVD
Trigger: GTCCACACTTGTGATTCTCAATGGAGAGTGAAAACG...TCTCTGATAATGTCCCCAATCATACCAGGGAGACTGGCATTGACGAGAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CATGCGCTTCCTCTCAGTGCTGTTGATGGCGAATTGTATCATGGCCATGTAAGATTCCTCTCAGTGCTGTaGATGGCGAATTGTATCATG +
Preference number: 5 (lower is better)
Translates to: HALPLSAVDGELYHGHVRFLSVL*MANCIM
Trigger: CATGATACAATTCGCCATCAACAGCACTGAGAGGAA...TCTTACATGGCCATGATACAATTCGCCATCAACAGCACTGAGAGGAAGCGCATG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAGGAATCAGATACTCTaGGGGAACACAAGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNRNQIL*GNTRSQ
Trigger: CTGGGACCTTGTGTTCCCCAAGAGTATCTGATTCCT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGGGTGGTTAATAATCTaGATCCCAGCTGGAAACTTG +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKGWLII*IPAGNL
Trigger: CAAGTTTCCAGCTGGGATCAAGATTATTAACCACCC...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGCGAAGCCACTGGATGTaGGATAGGCTATTGTTGATA +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRSHWM*DRLLLI
Trigger: TATCAACAATAGCCTATCCAACATCCAGTGGCTTCG...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp CCTGGAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGAATCTCTTTTCACCATaGCCTTTGTTGTTCCCACCC +
Preference number: 5 (lower is better)
Translates to: PGRNRALQVFPSIKTKSKNLFSP*PLLFPP
Trigger: GGGTGGGAACAACAAAGGCAATGGTGAAAAGAGATT...CTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp AAAAGCAAGGAACAGAAGTCAATTGAAACCCCAGGTCATCCTACCCACCTTCTGAGGAACAGAAGTCAATaGAAACCCCAGGTCATCCTA +
Preference number: 5 (lower is better)
Translates to: KSKEQKSIETPGHPTHLLRNRSQ*KPQVIL
Trigger: TAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCT...CAGAAGGTGGGTAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCTTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACATGTTGGATAGGCTATaGTTGATAGTGCAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNMLDRL*LIVQPA
Trigger: AGCAGGCTGCACTATCAACAATAGCCTATCCAACAT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACTTCCTCTCAGTGCTGTaGATGGCGAATTGTATCATG +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNFLSVL*MANCIM
Trigger: CATGATACAATTCGCCATCAACAGCACTGAGAGGAA...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS-3UTR CAA 90 bp GAAGAAACCGTGCACTGCAGGTCTTCCCTTCTATCAAAACTAAAAGCAAGGAACAGGAACAGAAGTCAATaGAAACCCCAGGTCATCCTA +
Preference number: 5 (lower is better)
Translates to: EETVHCRSSLLSKLKARNRNRSQ*KPQVIL
Trigger: TAGGATGACCTGGGGTTTCAATTGACTTCTGTTCCT...GTTCCTTGCTTTTAGTTTTGATAGAAGGGAAGACCTGCAGTGCACGGTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS TCA 90 bp ATCTTCCTTAATAATCCTAGCCCATCTATCACAATCACTTTTGTCTaGATTCTTACAAGCTCATCAGGTATTTATGGGCCTTCTGACACC +
Preference number: 5 (lower is better)
Translates to: IFLNNPSPSITITFV*ILTSSSGIYGPSDT
Trigger: GGTGTCAGAAGGCCCATAAATACCTGATGAGCTTGTAAGAATTCAGACAAAAGTGATTGTGATAGATGGGCTAGGATTATTAAGGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS TCA 90 bp TTTTGTCTGAATTCTTACAAGCTCATCAGGTATTTATGGGCCTTCTaGCACCACTTACATTGTAATCCAAATACCTTTTTAGCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: FCLNSYKLIRYLWAF*HHLHCNPNTFLALL
Trigger: TAGAAGAGCTAAAAAGGTATTTGGATTACAATGTAAGTGGTGTCAGAAGGCCCATAAATACCTGATGAGCTTGTAAGAATTCAGACAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CAA 72 bp GGGCCGGGGGTGGGGTCTGGCACCGGAGCTTTCAGTTaGTTCCGCTGTTTGAAATTGGCGCCGGCGGAGCGT +
Preference number: 6 (lower is better)
Translates to: GPGVGSGTGAFS*FRCLKLAPAER
Trigger: ACGCTCCGCCGGCGCCAATTTCAAACAGCGGAACAAACTGAAAGCTCCGGTGCCAGACCCCACCCCCGGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359843.8
CDS TCA 72 bp GGCAATGCGGACTCGCTTGCTATGGCGGGCAAGCTCTaGGCTCATGAGGGAAGCCGCCAGGGGCAATGGCAC +
Preference number: 6 (lower is better)
Translates to: GNADSLAMAGKL*AHEGSRQGQWH
Trigger: GTGCCATTGCCCCTGGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000366362.3
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS CCA 72 bp ACACCCACCTTGGGGGCAATGCGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTCATGAGGGAAGCCGCC +
Preference number: 6 (lower is better)
Translates to: TPTLGAMRTRLL*RASSELMREAA
Trigger: GGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CCA 72 bp AGCAGCACCTTGGGGGCAATGCGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTCATGAGGGAAGCCGCC +
Preference number: 6 (lower is better)
Translates to: SSTLGAMRTRLL*RASSELMREAA
Trigger: GGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS GCA 72 bp GAAGCCGCCAGGGGCAATGGCACCTTCACCGAGGGCTaGAACACCAGTGACTGGTTCACCGGGAACTGGATA +
Preference number: 6 (lower is better)
Translates to: EAARGNGTFTEG*NTSDWFTGNWI
Trigger: TATCCAGTTCCCGGTGAACCAGTCACTGGTGTTGCAGCCCTCGGTGAAGGTGCCATTGCCCCTGGCGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000366362.3
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS GCA 72 bp AGCAGCTCCGGCTCATCCACACAGGGAGGCAGTAGATaGTGTTTTCTCCGAGACCGGCTCCTCTCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SSSGSSTQGGSR*CFLRDRLLSLL
Trigger: GAGGAGGGAGAGGAGCCGGTCTCGGAGAAAACAGCATCTACTGCCTCCCTGTGTGGATGAGCCGGAGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CCA 72 bp GGCATCATAGCTGGTTTGGGTTTGAGGCCGGAGTCCTaGAGGCTGAGTTGGGGCTCCCCCACAGCTGATGAG +
Preference number: 6 (lower is better)
Translates to: GIIAGLGLRPES*RLSWGSPTADE
Trigger: CTCATCAGCTGTGGGGGAGCCCCAACTCAGCCTCCAGGACTCCGGCCTCAAACCCAAACCAGCTATGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS CCA 72 bp CCAAAAACCTTGGGGGCAATGCGGACTCGCTTGCTATaGCGGGCAAGCTCTGAGCTCATGAGGGAAGCCGCC +
Preference number: 6 (lower is better)
Translates to: PKTLGAMRTRLL*RASSELMREAA
Trigger: GGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTTTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342628.6
CDS CCA 72 bp AGGCAAGGGGTCAGAGGCACCCTGGGAGGTTTGTACTaGGCTGAAATCCAGTCCCCCTACTTTGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: RQGVRGTLGGLY*AEIQSPYFGWG
Trigger: CCCCCAGCCAAAGTAGGGGGACTGGATTTCAGCCCAGTACAAACCTCCCAGGGTGCCTCTGACCCCTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CAA 90 bp TCAGAGGAAAATAGGACACCCACCTTGGGGGCAATGCGGACTCGCTaGCTATGGCGGGCAAGCTCTGAGCTCATGAGGGAAGCCGCCAGG +
Preference number: 6 (lower is better)
Translates to: SEENRTPTLGAMRTR*LWRASSELMREAAR
Trigger: CCTGGCGGCTTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGGGTGTCCTATTTTCCTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS TCA 72 bp GGGAGGGCCACTCTTCCAAGGGAGGGCTCTCCACTTTaGTGGGTCTCGCTAAGTGTGGCATTTCCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: GRATLPREGSPL*WVSLSVAFPPQ
Trigger: CTGGGGAGGAAATGCCACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTCCCTTGGAAGAGTGGCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS TCA 72 bp CTCCGAGACCGGCTCCTCTCCCTCCTCTCCCTGTGTTaGATCACAAGCATTTCCGAGACACACCGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: LRDRLLSLLSLC*ITSISETHRVG
Trigger: CCCAACCCGGTGTGTCTCGGAAATGCTTGTGATTCAACACAGGGAGAGGAGGGAGAGGAGCCGGTCTCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CAA 72 bp GGGGAGGGCCACTCTTCCAAGGGAGGGCTCTCCACTTaGATGGGTCTCGCTAAGTGTGGCATTTCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: GEGHSSKGGLST*MGLAKCGISSP
Trigger: TGGGGAGGAAATGCCACACTTAGCGAGACCCATCAAAGTGGAGAGCCCTCCCTTGGAAGAGTGGCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CAA 72 bp TCAGCTAGCAGCACCTTGGGGGCAATGCGGACTCGCTaGCTATGGCGGGCAAGCTCTGAGCTCATGAGGGAA +
Preference number: 6 (lower is better)
Translates to: SASSTLGAMRTR*LWRASSELMRE
Trigger: TTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGCTGCTAGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359843.8
ENST00000361953.7
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS CAA 90 bp GCAAGGGCAGGGCTCTACTGTAGCTCAGGAATAAACTGGGACCAGTaGATGTTGTCAGGGCCCAGTGGGTCCTCGTCCAGGCCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: ARAGLYCSSGINWDQ*MLSGPSGSSSRPGK
Trigger: CTTTCCTGGCCTGGACGAGGACCCACTGGGCCCTGACAACATCAACTGGTCCCAGTTTATTCCTGAGCTACAGTAGAGCCCTGCCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS TCA 72 bp GGGACGAATCCTCCCAGGAGTGAGATGATTCCTCTTTaGAAGATGGGGCCGGGGAGGGCCACTCTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: GTNPPRSEMIPL*KMGPGRATLPR
Trigger: CCTTGGAAGAGTGGCCCTCCCCGGCCCCATCTTTCAAAGAGGAATCATCTCACTCCTGGGAGGATTCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS TCA 72 bp GGTGGGAGATTGGGACGAATCCTCCCAGGAGTGAGATaGTTCCTCTTTGAAAGATGGGGCCGGGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: GGRLGRILPGVR*FLFERWGRGGP
Trigger: TGGCCCTCCCCGGCCCCATCTTTCAAAGAGGAATCATCTCACTCCTGGGAGGATTCGTCCCAATCTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS TCA 72 bp TCCCATACTAACGTGCGCCCAGGGGGAGTTCGGTTTTaGTGGTCATGTTCCGGCGGAGCTCTGGATTCGGTC +
Preference number: 6 (lower is better)
Translates to: SHTNVRPGGVRF*WSCSGGALDSV
Trigger: GACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGTTAGTATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS GCA 72 bp CCTGCTGCCTCACCATCTGCACAGGTCTCCCGTTTCTaGTCGCAAAGGGCTCCAGGTGGTCTAGGAAGATTC +
Preference number: 6 (lower is better)
Translates to: PAASPSAQVSRF*SQRAPGGLGRF
Trigger: GAATCTTCCTAGACCACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTGTGCAGATGGTGAGGCAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
CDS GCA 72 bp AGGACCAGGCCCAAGGCCCACTCTCCCATACTAACGTaGGCCCAGGGGGAGTTCGGTTTTGATGGTCATGTT +
Preference number: 6 (lower is better)
Translates to: RTRPKAHSPILT*AQGEFGFDGHV
Trigger: AACATGACCATCAAAACCGAACTCCCCCTGGGCGCACGTTAGTATGGGAGAGTGGGCCTTGGGCCTGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS GCA 72 bp CAGCCTGCTGCCTCACCATCACAGGTCTCCCGTTTCTaGTCGCAAAGGGCTCCAGGTGGTCTAGGAAGATTC +
Preference number: 6 (lower is better)
Translates to: QPAASPSQVSRF*SQRAPGGLGRF
Trigger: GAATCTTCCTAGACCACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTGTGATGGTGAGGCAGCAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS CAA 72 bp AATAGGACACCCACCTTGGGGGCAATGCGGACTCGCTaGCTATGGCGGGCAAGCTCTGAGCTCATGAGGGAA +
Preference number: 6 (lower is better)
Translates to: NRTPTLGAMRTR*LWRASSELMRE
Trigger: TTCCCTCATGAGCTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGGGTGTCCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CAA 90 bp AGTGGGTCCTCGTCCAGGCCAGGAAAGCTGATGTCCAGCAGGATCTaGCTGAGGCTGTCATTCATTGTGTCCAGGACCAGGCCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: SGSSSRPGKLMSSRI*LRLSFIVSRTRPSV
Trigger: GACAGAAGGCCTGGTCCTGGACACAATGAATGACAGCCTCAGCAAGATCCTGCTGGACATCAGCTTTCCTGGCCTGGACGAGGACCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CAA 90 bp GCAGGGCTCTACTGTAGCTCAGGAATAAACTGGGACCAGTTGATGTaGTCAGGGCCCAGTGGGTCCTCGTCCAGGCCAGGAAAGCTGATG +
Preference number: 6 (lower is better)
Translates to: AGLYCSSGINWDQLM*SGPSGSSSRPGKLM
Trigger: CATCAGCTTTCCTGGCCTGGACGAGGACCCACTGGGCCCTGACAACATCAACTGGTCCCAGTTTATTCCTGAGCTACAGTAGAGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS GCA 72 bp GTCTCGAAGGCTCCTCAACCACAGGTCTCCCGTTTCTaGTCGCAAAGGGCTCCAGGTGGTCTAGGAAGATTC +
Preference number: 6 (lower is better)
Translates to: VSKAPQPQVSRF*SQRAPGGLGRF
Trigger: GAATCTTCCTAGACCACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTGTGGTTGAGGAGCCTTCGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538564.5
CDS CCA 72 bp GCAAGGGCAGGGCTCTACTGTAGCTCAGGAATAAACTaGGACCAGTTGATGTTGTCAGGGCCCAGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: ARAGLYCSSGIN*DQLMLSGPSGS
Trigger: GGACCCACTGGGCCCTGACAACATCAACTGGTCCCAGTTTATTCCTGAGCTACAGTAGAGCCCTGCCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CAA 72 bp GGGCTCTACTGTAGCTCAGGAATAAACTGGGACCAGTaGATGTTGTCAGGGCCCAGTGGGTCCTCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GLYCSSGINWDQ*MLSGPSGSSSR
Trigger: CCTGGACGAGGACCCACTGGGCCCTGACAACATCAACTGGTCCCAGTTTATTCCTGAGCTACAGTAGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS GCA 72 bp GGCTCCAGGTGGTCTAGGAAGATTCACATCCCTAGCTaGAGGTTTTGGTCCCAAGGTCTCCAGGGTCACTTC +
Preference number: 6 (lower is better)
Translates to: GSRWSRKIHIPS*RFWSQGLQGHF
Trigger: GAAGTGACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCACCTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS GCA 72 bp GAGAGACTGTCAGGCTGGGCTGACCTTGATTTTGGTTaGTGTGGGACACATTACCTTCCAGCCTGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: ERLSGWADLDFG*CGTHYLPAWLG
Trigger: GCCAAGCCAGGCTGGAAGGTAATGTGTCCCACAGCAACCAAAATCAAGGTCAGCCCAGCCTGACAGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545049.1
CDS CCA 72 bp TCTCCAGGGTCACTTCTGTCCTTTTGGCATCATAGCTaGTTTGGGTTTGAGGCCGGAGTCCTGGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SPGSLLSFWHHS*FGFEAGVLEAE
Trigger: CTCAGCCTCCAGGACTCCGGCCTCAAACCCAAACCAGCTATGATGCCAAAAGGACAGAAGTGACCCTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS CAA 72 bp TACTGTAGCTCAGGAATAAACTGGGACCAGTTGATGTaGTCAGGGCCCAGTGGGTCCTCGTCCAGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: YCSSGINWDQLM*SGPSGSSSRPG
Trigger: TCCTGGCCTGGACGAGGACCCACTGGGCCCTGACAACATCAACTGGTCCCAGTTTATTCCTGAGCTACAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CAA 72 bp CAGAATCTCTCTTCAGAGGAAAATAGGACACCCACCTaGGGGGCAATGCGGACTCGCTTGCTATGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: QNLSSEENRTPT*GAMRTRLLWRA
Trigger: TGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGGGTGTCCTATTTTCCTCTGAAGAGAGATTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CAA 90 bp GCAGTACAGCACTGGAGAGACTGTCAGGCTGGGCTGACCTTGATTTaGGTTGCTGTGGGACACATTACCTTCCAGCCTGGCTTGGCAATG +
Preference number: 6 (lower is better)
Translates to: AVQHWRDCQAGLTLI*VAVGHITFQPGLAM
Trigger: CATTGCCAAGCCAGGCTGGAAGGTAATGTGTCCCACAGCAACCAAAATCAAGGTCAGCCCAGCCTGACAGTCTCTCCAGTGCTGTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545049.1
CDS CCA 72 bp ACAGGTCTCCCGTTTCTGCTCGCAAAGGGCTCCAGGTaGTCTAGGAAGATTCACATCCCTAGCTGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: TGLPFLLAKGSR*SRKIHIPSCRF
Trigger: AAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCACCTGGAGCCCTTTGCGAGCAGAAACGGGAGACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS CCA 72 bp AGAATCTCTCTTCAGAGGAAAATAGGACACCCACCTTaGGGGCAATGCGGACTCGCTTGCTATGGCGGGCAA +
Preference number: 6 (lower is better)
Translates to: RISLQRKIGHPP*GQCGLACYGGQ
Trigger: TTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGGGTGTCCTATTTTCCTCTGAAGAGAGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CCA 72 bp GAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTGCTGCTTGTGGCAGAT +
Preference number: 6 (lower is better)
Translates to: EFGFDGHVPAEL*IRSFLLLLVAD
Trigger: ATCTGCCACAAGCAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS CAA 72 bp AGAGTTGGACTCTGCCACTTCCTTGGAGGCCTCTGCTaGATTAGACTCCTGTTGGGCAGGGGATCTCTTAGG +
Preference number: 6 (lower is better)
Translates to: RVGLCHFLGGLC*IRLLLGRGSLR
Trigger: CCTAAGAGATCCCCTGCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 90 bp TTAATTGGCCAGAATCTCTCTTCAGAGGAAAATAGGACACCCACCTaGGGGGCAATGCGGACTCGCTTGCTATGGCGGGCAAGCTCTGAG +
Preference number: 6 (lower is better)
Translates to: LIGQNLSSEENRTPT*GAMRTRLLWRASSE
Trigger: CTCAGAGCTTGCCCGCCATAGCAAGCGAGTCCGCATTGCCCCCAAGGTGGGTGTCCTATTTTCCTCTGAAGAGAGATTCTGGCCAATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CAA 90 bp CTCAGCCCCAGGAGCTTTGCTCTCCTTCTCTGGGCTCAGATCCCTTaGAGGTGGGAACAGAATCCCAGAGTCTGGTTCCCTAAAGATATG +
Preference number: 6 (lower is better)
Translates to: LSPRSFALLLWAQIP*RWEQNPRVWFPKDM
Trigger: CATATCTTTAGGGAACCAGACTCTGGGATTCTGTTCCCACCTCAAAGGGATCTGAGCCCAGAGAAGGAGAGCAAAGCTCCTGGGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS CAA 90 bp CAAGTTGCAGTACAGCACTGGAGAGACTGTCAGGCTGGGCTGACCTaGATTTTGGTTGCTGTGGGACACATTACCTTCCAGCCTGGCTTG +
Preference number: 6 (lower is better)
Translates to: QVAVQHWRDCQAGLT*ILVAVGHITFQPGL
Trigger: CAAGCCAGGCTGGAAGGTAATGTGTCCCACAGCAACCAAAATCAAGGTCAGCCCAGCCTGACAGTCTCTCCAGTGCTGTACTGCAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545049.1
CDS CCA 72 bp GTGTTGAATCACAAGCATTTCCGAGACACACCGGGTTaGGGACCTAAGCCCACTGTAGGACTTCTTGGGTCT +
Preference number: 6 (lower is better)
Translates to: VLNHKHFRDTPG*GPKPTVGLLGS
Trigger: AGACCCAAGAAGTCCTACAGTGGGCTTAGGTCCCCAACCCGGTGTGTCTCGGAAATGCTTGTGATTCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000536066.1
ENST00000627656.2
CDS CCA 72 bp GAGTTCGGTTTTGATGGTCATGTTCCGGCGGAGCTCTaGATTCGGTCGTTTCTGCTGCTGCTTAAACACCTG +
Preference number: 6 (lower is better)
Translates to: EFGFDGHVPAEL*IRSFLLLLKHL
Trigger: CAGGTGTTTAAGCAGCAGCAGAAACGACCGAATCCAGAGCTCCGCCGGAACATGACCATCAAAACCGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS CAA 72 bp GTGTCCTTTGCACTTAACTGCTGTCCCAGATACAAGTaGCAGTACAGCACTGGAGAGACTGTCAGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: VSFALNCCPRYK*QYSTGETVRLG
Trigger: GCCCAGCCTGACAGTCTCTCCAGTGCTGTACTGCAACTTGTATCTGGGACAGCAGTTAAGTGCAAAGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545049.1
CDS CAA 90 bp AAACTTGCAAGAGTTGGACTCTGCCACTTCCTTGGAGGCCTCTGCTaGATTAGACTCCTGTTGGGCAGGGGATCTCTTAGGTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: KLARVGLCHFLGGLC*IRLLLGRGSLRFLL
Trigger: GAGGAGGAACCTAAGAGATCCCCTGCCCAACAGGAGTCTAATCAAGCAGAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 90 bp ATGGCCACTACTTGCGTGTTGGGCATGGTGGGGTGGTTAATAATCTaGATCCCAGCTGGAAACTTGCAAGAGTTGGACTCTGCCACTTCC +
Preference number: 6 (lower is better)
Translates to: MATTCVLGMVGWLII*IPAGNLQELDSATS
Trigger: GGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATTATTAACCACCCCACCATGCCCAACACGCAAGTAGTGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 90 bp TCAGAACTCATCTTTCGAAGCCACTGGATGTTGGATAGGCTATTGTaGATAGTGCAGCCTGCTGCCTCACCATCTGCACAGGTCTCCCGT +
Preference number: 6 (lower is better)
Translates to: SELIFRSHWMLDRLL*IVQPAASPSAQVSR
Trigger: ACGGGAGACCTGTGCAGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGATGAGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
CDS CAA 90 bp CCATCAGAACTCATCTTTCGAAGCCACTGGATGTTGGATAGGCTATaGTTGATAGTGCAGCCTGCTGCCTCACCATCTGCACAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: PSELIFRSHWMLDRL*LIVQPAASPSAQVS
Trigger: GGAGACCTGTGCAGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGATGAGTTCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
CDS CAA 90 bp CCATCAGAACTCATCTTTCGAAGCCACTGGATGTTGGATAGGCTATaGTTGATAGTGCAGCCTGCTGCCTCACCATCACAGGTCTCCCGT +
Preference number: 6 (lower is better)
Translates to: PSELIFRSHWMLDRL*LIVQPAASPSQVSR
Trigger: ACGGGAGACCTGTGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGATGAGTTCTGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS GCA 72 bp CTTGATCCCAGCTGGAAACTTGCAAGAGTTGGACTCTaGCACTTCCTTGGAGGCCTCTGCTTGATTAGACTC +
Preference number: 6 (lower is better)
Translates to: LDPSWKLARVGL*HFLGGLCLIRL
Trigger: GAGTCTAATCAAGCAGAGGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS GCA 72 bp CACAGCGCCCGGCCAAATCCATCTCTTTCTAAGGCCTaGCTCCCTTGTGTATCTTCCTTAATAATCCTAGCC +
Preference number: 6 (lower is better)
Translates to: HSARPNPSLSKA*LPCVSSLIILA
Trigger: GGCTAGGATTATTAAGGAAGATACACAAGGGAGGCAGGCCTTAGAAAGAGATGGATTTGGCCGGGCGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CCA 72 bp GGGATGGCCACTACTTGCGTGTTGGGCATGGTGGGGTaGTTAATAATCTTGATCCCAGCTGGAAACTTGCAA +
Preference number: 6 (lower is better)
Translates to: GMATTCVLGMVG*LIILIPAGNLQ
Trigger: TTGCAAGTTTCCAGCTGGGATCAAGATTATTAACCACCCCACCATGCCCAACACGCAAGTAGTGGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 72 bp GTGGGGTGGTTAATAATCTTGATCCCAGCTGGAAACTaGCAAGAGTTGGACTCTGCCACTTCCTTGGAGGCC +
Preference number: 6 (lower is better)
Translates to: VGWLIILIPAGN*QELDSATSLEA
Trigger: GGCCTCCAAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATTATTAACCACCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 90 bp TCAGAACTCATCTTTCGAAGCCACTGGATGTTGGATAGGCTATTGTaGATAGTGCAGCCTGCTGCCTCACCATCACAGGTCTCCCGTTTC +
Preference number: 6 (lower is better)
Translates to: SELIFRSHWMLDRLL*IVQPAASPSQVSRF
Trigger: GAAACGGGAGACCTGTGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGATGAGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS CCA 72 bp GGGCATGGTGGGGTGGTTAATAATCTTGATCCCAGCTaGAAACTTGCAAGAGTTGGACTCTGCCACTTCCTT +
Preference number: 6 (lower is better)
Translates to: GHGGVVNNLDPS*KLARVGLCHFL
Trigger: AAGGAAGTGGCAGAGTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATTATTAACCACCCCACCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CCA 72 bp TGGTCTAGGAAGATTCACATCCCTAGCTGCAGGTTTTaGTCCCAAGGTCTCCAGGGTCACTTCTGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: WSRKIHIPSCRF*SQGLQGHFCPF
Trigger: AAAAGGACAGAAGTGACCCTGGAGACCTTGGGACCAAAACCTGCAGCTAGGGATGTGAATCTTCCTAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000538564.5
ENST00000545049.1
ENST00000627656.2
CDS CCA 72 bp TTTGCTCTCCTTCTCTGGGCTCAGATCCCTTTGAGGTaGGAACAGAATCCCAGAGTCTGGTTCCCTAAAGAT +
Preference number: 6 (lower is better)
Translates to: FALLLWAQIPLR*EQNPRVWFPKD
Trigger: ATCTTTAGGGAACCAGACTCTGGGATTCTGTTCCCACCTCAAAGGGATCTGAGCCCAGAGAAGGAGAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536066.1
CDS CAA 72 bp ATCTTTCGAAGCCACTGGATGTTGGATAGGCTATTGTaGATAGTGCAGCCTGCTGCCTCACCATCTGCACAG +
Preference number: 6 (lower is better)
Translates to: IFRSHWMLDRLL*IVQPAASPSAQ
Trigger: CTGTGCAGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
CDS CAA 72 bp CTCATCTTTCGAAGCCACTGGATGTTGGATAGGCTATaGTTGATAGTGCAGCCTGCTGCCTCACCATCTGCA +
Preference number: 6 (lower is better)
Translates to: LIFRSHWMLDRL*LIVQPAASPSA
Trigger: TGCAGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
CDS CAA 72 bp ATCTTTCGAAGCCACTGGATGTTGGATAGGCTATTGTaGATAGTGCAGCCTGCTGCCTCACCATCACAGGTC +
Preference number: 6 (lower is better)
Translates to: IFRSHWMLDRLL*IVQPAASPSQV
Trigger: GACCTGTGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS CAA 72 bp CTCATCTTTCGAAGCCACTGGATGTTGGATAGGCTATaGTTGATAGTGCAGCCTGCTGCCTCACCATCACAG +
Preference number: 6 (lower is better)
Translates to: LIFRSHWMLDRL*LIVQPAASPSQ
Trigger: CTGTGATGGTGAGGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627656.2
CDS TCA 72 bp TCCTCCCCAGGCTGGATTTCTTCCTCCTTGATAGTCTaGACTGGAAGCAAAGGAGAAAACCCTTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: SSPGWISSSLIV*TGSKGENPSPN
Trigger: GTTTGGAGAAGGGTTTTCTCCTTTGCTTCCAGTTCAGACTATCAAGGAGGAAGAAATCCAGCCTGGGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000535350.1
ENST00000536066.1
ENST00000627656.2
CDS CCA 72 bp GATTTTGGTTGCTGTGGGACACATTACCTTCCAGCCTaGCTTGGCAATGTGCTTAAAGTAGGGAAAGTGGTC +
Preference number: 6 (lower is better)
Translates to: DFGCCGTHYLPA*LGNVLKVGKVV
Trigger: GACCACTTTCCCTACTTTAAGCACATTGCCAAGCCAGGCTGGAAGGTAATGTGTCCCACAGCAACCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545049.1
CDS CAA 72 bp ACTTGCGTGTTGGGCATGGTGGGGTGGTTAATAATCTaGATCCCAGCTGGAAACTTGCAAGAGTTGGACTCT +
Preference number: 6 (lower is better)
Translates to: TCVLGMVGWLII*IPAGNLQELDS
Trigger: AGAGTCCAACTCTTGCAAGTTTCCAGCTGGGATCAAGATTATTAACCACCCCACCATGCCCAACACGCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 72 bp AGTCCATCAGAACTCATCTTTCGAAGCCACTGGATGTaGGATAGGCTATTGTTGATAGTGCAGCCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SPSELIFRSHWM*DRLLLIVQPAA
Trigger: GGCAGCAGGCTGCACTATCAACAATAGCCTATCCAACATCCAGTGGCTTCGAAAGATGAGTTCTGATGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000537018.5
ENST00000545049.1
ENST00000627656.2
CDS CAA 90 bp TGTGATGATGCTGTGAATATTAGCATTGTTGGGGATGGCCACTACTaGCGTGTTGGGCATGGTGGGGTGGTTAATAATCTTGATCCCAGC +
Preference number: 6 (lower is better)
Translates to: CDDAVNISIVGDGHY*RVGHGGVVNNLDPS
Trigger: GCTGGGATCAAGATTATTAACCACCCCACCATGCCCAACACGCAAGTAGTGGCCATCCCCAACAATGCTAATATTCACAGCATCATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS TCA 72 bp TCTTTTCCCTTGGCAGTCAGTGCTGTGATGATGCTGTaGATATTAGCATTGTTGGGGATGGCCACTACTTGC +
Preference number: 6 (lower is better)
Translates to: SFPLAVSAVMML*ILALLGMATTC
Trigger: GCAAGTAGTGGCCATCCCCAACAATGCTAATATTCACAGCATCATCACAGCACTGACTGCCAAGGGAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 72 bp ATATTAGCATTGTTGGGGATGGCCACTACTTGCGTGTaGGGCATGGTGGGGTGGTTAATAATCTTGATCCCA +
Preference number: 6 (lower is better)
Translates to: ILALLGMATTCV*GMVGWLIILIP
Trigger: TGGGATCAAGATTATTAACCACCCCACCATGCCCAACACGCAAGTAGTGGCCATCCCCAACAATGCTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 72 bp GCTGTGAATATTAGCATTGTTGGGGATGGCCACTACTaGCGTGTTGGGCATGGTGGGGTGGTTAATAATCTT +
Preference number: 6 (lower is better)
Translates to: AVNISIVGDGHY*RVGHGGVVNNL
Trigger: AAGATTATTAACCACCCCACCATGCCCAACACGCAAGTAGTGGCCATCCCCAACAATGCTAATATTCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS TCA 72 bp GCTCTCAAGGAACACTTATCAGAGTGCTTTGCAAGCTaGAGGTCCAACATTCTTAATTGGCCAGAATCTCTC +
Preference number: 6 (lower is better)
Translates to: ALKEHLSECFAS*RSNILNWPESL
Trigger: GAGAGATTCTGGCCAATTAAGAATGTTGGACCTTCAGCTTGCAAAGCACTCTGATAAGTGTTCCTTGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CAA 72 bp CTAGTTTTCATTATGAATCTGCGTTTTCACTCTCCATaGAGAATCACAAGTGTGGACCCTCCAGACTGCAGT +
Preference number: 6 (lower is better)
Translates to: LVFIMNLRFHSP*RITSVDPPDCS
Trigger: ACTGCAGTCTGGAGGGTCCACACTTGTGATTCTCAATGGAGAGTGAAAACGCAGATTCATAATGAAAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342628.6
ENST00000359843.8
ENST00000361953.7
ENST00000627656.2
CDS CAA 90 bp TGTGTATCTTCCTTAATAATCCTAGCCCATCTATCACAATCACTTTaGTCTGAATTCTTACAAGCTCATCAGGTATTTATGGGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: CVSSLIILAHLSQSL*SEFLQAHQVFMGLL
Trigger: CAGAAGGCCCATAAATACCTGATGAGCTTGTAAGAATTCAGACAAAAGTGATTGTGATAGATGGGCTAGGATTATTAAGGAAGATACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS TCA 72 bp AATAATCCTAGCCCATCTATCACAATCACTTTTGTCTaGATTCTTACAAGCTCATCAGGTATTTATGGGCCT +
Preference number: 6 (lower is better)
Translates to: NNPSPSITITFV*ILTSSSGIYGP
Trigger: AGGCCCATAAATACCTGATGAGCTTGTAAGAATTCAGACAAAAGTGATTGTGATAGATGGGCTAGGATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS TCA 72 bp AATTCTTACAAGCTCATCAGGTATTTATGGGCCTTCTaGCACCACTTACATTGTAATCCAAATACCTTTTTA +
Preference number: 6 (lower is better)
Translates to: NSYKLIRYLWAF*HHLHCNPNTFL
Trigger: TAAAAAGGTATTTGGATTACAATGTAAGTGGTGTCAGAAGGCCCATAAATACCTGATGAGCTTGTAAGAATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366362.3
CDS CAA 72 bp TCCTTAATAATCCTAGCCCATCTATCACAATCACTTTaGTCTGAATTCTTACAAGCTCATCAGGTATTTATG +
Preference number: 6 (lower is better)
Translates to: SLIILAHLSQSL*SEFLQAHQVFM
Trigger: CATAAATACCTGATGAGCTTGTAAGAATTCAGACAAAAGTGATTGTGATAGATGGGCTAGGATTATTAAGGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366362.3