Pregenerated sensors for FOXL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000248767Ensembl transcript IDs: ENST00000506382.2, ENST00000510017.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTCAGCTGGGTGCAAAGGGCAGGTGTCAGCCCAGGAGGGCTCTCTaGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: FQLGAKGRCQPRRAL*RGAAPLYPASQQWG Trigger: TCCCCACTGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGCCCTCCTGGGCTGACACCTGCCCTTTGCACCCAGCTGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 90 bp | GCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGTaGGGAGGAGGGGCTCATCTGTGGTCAGTTTGCACTCAGGGACCT | + |
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Preference number: 1 (lower is better) Translates to: ALWRGAAPLYPASQQ*GGGAHLWSVCTQGP Trigger: AGGTCCCTGAGTGCAAACTGACCACAGATGAGCCCCTCCTCCCCACTGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 90 bp | TCTGTCTGCAGGAGAAATTGTAGGATTTGCCGAACCCTGGCTTCCTaGCTCAAGGTGGGGCTGGAATCGTCTTTCCAGGGAGGGTCCGGG | + |
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Preference number: 1 (lower is better) Translates to: SVCRRNCRICRTLAS*LKVGLESSFQGGSG Trigger: CCCGGACCCTCCCTGGAAAGACGATTCCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCCTGCAGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 90 bp | CCTGACCTTCTGTCTGCAGGAGAAATTGTAGGATTTGCCGAACCCTaGCTTCCTGGCTCAAGGTGGGGCTGGAATCGTCTTTCCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PDLLSAGEIVGFAEP*LPGSRWGWNRLSRE Trigger: CTCCCTGGAAAGACGATTCCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCCTGCAGACAGAAGGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGTGGGGAGGACGAACCCTGGCTTCCTaGCTCAAGGTGGGGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ALWRGAAPLYPASQQWGGRTLAS*LKVGLE Trigger: TTCCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCG...TCCTCCCCACTGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGGACCCCAGACTGAACTaGAGGGGCCTCCAGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SVVSLHSGTWWLLSNLPLDPRLN*RGLQGG Trigger: GCCACCCTGGAGGCCCCTGCAGTTCAGTCTGGGGTC...CAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGGAGGGCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAAGAAATTGTAGGATTTaGCGAACCCTGGCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AQEGSLEGCCSAIPSKSARNCRI*RTLASW Trigger: CCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCT...TGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGCCCTCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCGGCTCAAGGTGGGGCTaGAATCGTCTTTCCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VSLHSGTWWLLSNLPLSCGSRWG*NRLSRE Trigger: CTCCCTGGAAAGACGATTCCAGCCCCACCTTGAGCC...GCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTTGCCTGGTGTGGCACCTaGCCTTCTGTCTGCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TQGPGGCSQICRCPASIFAWCGT*PSVCRR Trigger: TCTCCTGCAGACAGAAGGTCAGGTGCCACACCAGGC...AAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCGGATTTGCCGAACCCTaGCTTCCTGGCTCAAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: CGQFALRDLVVALKSAAVGFAEP*LPGSRW Trigger: CCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCC...GACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 72 bp | TTTGCCGAACCCTGGCTTCCTGGCTCAAGGTGGGGCTaGAATCGTCTTTCCAGGGAGGGTCCGGGGAAGACC | + |
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Preference number: 3 (lower is better) Translates to: FAEPWLPGSRWG*NRLSREGPGKT Trigger: GGTCTTCCCCGGACCCTCCCTGGAAAGACGATTCCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 72 bp | GTAGGATTTGCCGAACCCTGGCTTCCTGGCTCAAGGTaGGGCTGGAATCGTCTTTCCAGGGAGGGTCCGGGG | + |
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Preference number: 3 (lower is better) Translates to: VGFAEPWLPGSR*GWNRLSREGPG Trigger: CCCCGGACCCTCCCTGGAAAGACGATTCCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR-3UTR CAA 90 bp | CAGGAGGGCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGTGTCAGGGACCTGGTGGTaGCTCTCAAATCTGCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: QEGSLEGCCSAIPSKSAVSGTWW*LSNLPL Trigger: CAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGA...CACTGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGCCCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 72 bp | AGGGGCTCATCTGTGGTCAGTTTGCACTCAGGGACCTaGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: RGSSVVSLHSGT*WLLSNLPLSCF Trigger: GAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACAGATGAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 72 bp | GGCTCATCTGTGGTCAGTTTGCACTCAGGGACCTGGTaGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: GSSVVSLHSGTW*LLSNLPLSCFH Trigger: ATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACAGATGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR GCA 72 bp | GTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTaGCGCTGTCCTGCTTCCATCTTTAAGGAGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: VCTQGPGGCSQI*RCPASIFKELH Trigger: GTGGAGCTCCTTAAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CCA 72 bp | AGGAGAAATTGTAGGATTTGCCGAACCCTGGCTTCCTaGCTCAAGGTGGGGCTGGAATCGTCTTTCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RRNCRICRTLAS*LKVGLESSFQG Trigger: TCCCTGGAAAGACGATTCCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR GCA 72 bp | CATCTGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTaGTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: HLWSVCTQGPGG*SQICRCPASIF Trigger: AAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | GCCCAGGAGGGCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGGCTCTCTGGAGGGGTaGTGCTCCGCTATACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AQEGSLEGCCSAIPSKSAGSLEG*CSAIPS Trigger: GCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGCC...TGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGCCCTCCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | GCCCAGGAGGGCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGTATCTGCCCTCTTGTaGGAGGCAGGGCGGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: AQEGSLEGCCSAIPSKSAVSALL*EAGRLE Trigger: CTCAAGCCGCCCTGCCTCGCACAAGAGGGCAGATAC...TGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGCCCTCCTGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | GGCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGTGGGGAGGCGAACCCTGGCTTCCTaGCTCAAGGTGGGGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GSLEGCCSAIPSKSAVGRRTLAS*LKVGLE Trigger: TTCCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCG...CCTCCCCACTGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR TCA 90 bp | GCTCTCTGGAGGGGTGCTGCTCCGCTATACCCAGCAAGTCAGCAGTGGGGAGGAGCCTGGTGTGGCACCTaGCCTTCTGTCTGCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ALWRGAAPLYPASQQWGGAWCGT*PSVCRR Trigger: TCTCCTGCAGACAGAAGGTCAGGTGCCACACCAGGC...TCCTCCCCACTGCTGACTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | CTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTTAGACCCCAGACTGAACTaGAGGGGCCTCCAGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LRDLVVALKSAAVLLPSLDPRLN*RGLQGG Trigger: GCCACCCTGGAGGCCCCTGCAGTTCAGTCTGGGGTC...TAAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | ACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTTCCCAGGAGGGCTCTCTaGAGGGGTGCTGCTCCGCTA | + |
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Preference number: 4 (lower is better) Translates to: TQGPGGCSQICRCPASIFPRRAL*RGAAPL Trigger: TAGCGGAGCAGCACCCCTCCAGAGAGCCCTCCTGGG...AAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | TCTGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGCCAGCAAGTCAGCAGTaGGGAGGAGGGGCTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SVVSLHSGTWWLLSNLPLPASQQ*GGGAHL Trigger: CAGATGAGCCCCTCCTCCCCACTGCTGACTTGCTGG...CAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | AGCAGATTCCAAGAGTTTTATTTCAGCTGGGTGCAAAGGGCAGGTGTCAGCCCACCAGCCGCGGGTATCTaGCCTCTTGTGCGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRFQEFYFSWVQRAGVSPPAAGI*PLVRGR Trigger: CCTGCCTCGCACAAGAGGGCAGATACCCGCGGCTGG...TGGGCTGACACCTGCCCTTTGCACCCAGCTGAAATAAAACTCTTGGAATCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | AGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTTAAGGCAGGGGCCTCCAGGGTaGCTCCACATCACATTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RDLVVALKSAAVLLPSLRQGPPG*LHITLS Trigger: GGACAATGTGATGTGGAGCCACCCTGGAGGCCCCTG...CCTTAAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | TGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCAGGGACCTGGTGGTTaGTCTCAAATCTGCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CGQFALRDLVVALKSAAVQGPGG*SQICRC Trigger: ACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTG...GACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCAGGAGAAATTGTAGGATTTGCCGAACCCTGGCTTCCTGGCTCAAGGTCTCTGGAGGGGTGCTaGTCCGCTATACCCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSAGEIVGFAEPWLPGSRSLEGC*SAIPSK Trigger: CTTGCTGGGTATAGCGGAGCAGCACCCCTCCAGAGA...CCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCCTGCAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCAGGAGAAATTGTAGGATTTGCCGAACCCTGGCTTCCTGGCTCAAGGGGCTCAAGGTGGGGCTaGAATCGTCTTTCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSAGEIVGFAEPWLPGSRGSRWG*NRLSRE Trigger: CTCCCTGGAAAGACGATTCCAGCCCCACCTTGAGCC...CCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCCTGCAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | TGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTTCCTGGCTCAAGGTaGGGCTGGAATCGTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CGQFALRDLVVALKSAAVLPGSR*GWNRLS Trigger: GGAAAGACGATTCCAGCCCCACCTTGAGCCAGGAAG...GACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCAGGAGAAATTGTAGGATTTGCCGAACCCTGGCTTCCTGGCTCAAGGGGATTTGCCGAACCCTaGCTTCCTGGCTCAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSAGEIVGFAEPWLPGSRGFAEP*LPGSRW Trigger: CCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCC...CCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCCTGCAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | TGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCGGAGGGGCTCATCTGTaGTCAGTTTGCACTCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: CGQFALRDLVVALKSAAVGGAHL*SVCTQG Trigger: TCCCTGAGTGCAAACTGACCACAGATGAGCCCCTCC...GACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | GTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCAGAAATTGTAGGATTTaGCGAACCCTGGCTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSLHSGTWWLLSNLPLSCRNCRI*RTLASW Trigger: CCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCT...GCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | CAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTTAAGGGTTGCTCTCAAATCTaGCGCTGTCCTGCTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: QGPGGCSQICRCPASIFKGCSQI*RCPASI Trigger: GATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACC...CTTAAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | TGTGGTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCACATTGTCCAAAAGTaGAGTCCCACGTTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CGQFALRDLVVALKSAAVHIVQK*SPTFSS Trigger: GCTGGAGAACGTGGGACTCCACTTTTGGACAATGTG...GACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | GGAGAAATTGTAGGATTTGCCGAACCCTGGCTTCCTGGCTCAAGGTGGGGCTGGGAGTTTTATTTCAGCTaGGTGCAAAGGGCAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GEIVGFAEPWLPGSRWGWEFYFS*VQRAGV Trigger: GACACCTGCCCTTTGCACCCAGCTGAAATAAAACTC...CCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| 3UTR CAA 72 bp | TCATCTGTGGTCAGTTTGCACTCAGGGACCTGGTGGTaGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: SSVVSLHSGTWW*LSNLPLSCFHL Trigger: AAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGACCACAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | AGCAGATTCCAAGAGTTTTATTTCAGCTGGGTGCAAAGGGCAGGTGTCAGCCCACACTCAGGGACCTGGTaGTTGCTCTCAAATCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: SRFQEFYFSWVQRAGVSPHSGTW*LLSNLP Trigger: CGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTG...TGGGCTGACACCTGCCCTTTGCACCCAGCTGAAATAAAACTCTTGGAATCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CCA 90 bp | CTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTTATTGCACTCAGGGACCTaGTGGTTGCTCTCAAATCTG | + |
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Preference number: 4 (lower is better) Translates to: LRDLVVALKSAAVLLPSLLHSGT*WLLSNL Trigger: CAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAA...TAAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR GCA 90 bp | AGCAGATTCCAAGAGTTTTATTTCAGCTGGGTGCAAAGGGCAGGTGTCAGCCCACATCTGTGGTCAGTTTaGACTCAGGGACCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: SRFQEFYFSWVQRAGVSPHLWSV*TQGPGG Trigger: ACCACCAGGTCCCTGAGTGCAAACTGACCACAGATG...TGGGCTGACACCTGCCCTTTGCACCCAGCTGAAATAAAACTCTTGGAATCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS GCA 90 bp | GCCCCTCGCGCTTGGGGCCGCGCCGCCGCCGCCGCCGCCGGTAGTTaGCGTTCTCGAAGAGGTCCAGCAGCGACTCGCAGCCGCCCGCGA | + |
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Preference number: 5 (lower is better) Translates to: APRAWGRAAAAAAGS*RSRRGPAATRSRPR Trigger: TCGCGGGCGGCTGCGAGTCGCTGCTGGACCTCTTCGAGAACGGCAACTACCGGCGGCGGCGGCGGCGGCGCGGCCCCAAGCGCGAGGGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506382.2 |
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| CDS CCA 90 bp | GCCCTCTTGTGCGAGGCAGGGCGGCTTGAGCCCAGGGAAGGGGTCTaGGGAGGACAGGATGTAGTCGATGCTGAACTTGAGGTCCCGGGG | + |
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Preference number: 5 (lower is better) Translates to: ALLCEAGRLEPREGV*GGQDVVDAELEVPG Trigger: CCCCGGGACCTCAAGTTCAGCATCGACTACATCCTGTCCTCCCCAGACCCCTTCCCTGGGCTCAAGCCGCCCTGCCTCGCACAAGAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506382.2 ENST00000510017.1 |
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| CDS CCA 90 bp | ACTGCAGGGGCCTCCAGGGTGGCTCCACATCACATTGTCCAAAAGTaGAGTCCCACGTTCTCCAGCCGCGGGTATCTGCCCTCTTGTGCG | + |
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Preference number: 5 (lower is better) Translates to: TAGASRVAPHHIVQK*SPTFSSRGYLPSCA Trigger: CGCACAAGAGGGCAGATACCCGCGGCTGGAGAACGTGGGACTCCACTTTTGGACAATGTGATGTGGAGCCACCCTGGAGGCCCCTGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CAA 90 bp | GGAGAAATTGTAGGATTTGCCGAACCCTGGCTTCCTGGCTCAAGGTGGGGCTGGCGGGTATCTGCCCTCTaGTGCGAGGCAGGGCGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GEIVGFAEPWLPGSRWGWRVSAL*CEAGRL Trigger: AAGCCGCCCTGCCTCGCACAAGAGGGCAGATACCCG...CCAGCCCCACCTTGAGCCAGGAAGCCAGGGTTCGGCAAATCCTACAATTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CAA 90 bp | CAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTTCCATCTTTAAGTCAGGGACCTGGTGGTaGCTCTCAAATCTGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: QGPGGCSQICRCPASIFKSGTWW*LSNLPL Trigger: CAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGA...CTTAAAGATGGAAGCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS-3UTR CAA 90 bp | GTCAGTTTGCACTCAGGGACCTGGTGGTTGCTCTCAAATCTGCCGCTGTCCTGCTGGCTCCACATCACATaGTCCAAAAGTGGAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: VSLHSGTWWLLSNLPLSCWLHIT*SKSGVP Trigger: TGGGACTCCACTTTTGGACAATGTGATGTGGAGCCA...GCAGGACAGCGGCAGATTTGAGAGCAACCACCAGGTCCCTGAGTGCAAACTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510017.1 |
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| CDS GCA 72 bp | GCTTGGGGCCGCGCCGCCGCCGCCGCCGCCGGTAGTTaGCGTTCTCGAAGAGGTCCAGCAGCGACTCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AWGRAAAAAAGS*RSRRGPAATRS Trigger: GCTGCGAGTCGCTGCTGGACCTCTTCGAGAACGGCAACTACCGGCGGCGGCGGCGGCGGCGCGGCCCCAAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506382.2 |
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| CDS GCA 72 bp | GCAGCGACTCGCAGCCGCCCGCGAACGTCCAGTAGTTaGCTTTGCCCTTCTCGTGGCCCTCGGACCGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: AATRSRPRTSSS*LCPSRGPRTAA Trigger: TGCCGCGGTCCGAGGGCCACGAGAAGGGCAAAGGCAACTACTGGACGTTCGCGGGCGGCTGCGAGTCGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506382.2 |
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| CDS GCA 72 bp | TCCCACGTTCTCCAGCCGCGGGTATCTGCCCTCTTGTaGGAGGCAGGGCGGCTTGAGCCCAGGGAAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SHVLQPRVSALL*EAGRLEPREGV Trigger: GACCCCTTCCCTGGGCTCAAGCCGCCCTGCCTCGCACAAGAGGGCAGATACCCGCGGCTGGAGAACGTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506382.2 ENST00000510017.1 |
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| CDS TCA 72 bp | TGGCGATCAAGGCGATGTAGCTGTACGCGGGCCGCGTaGGCCTCTTGTCTTCGTCGGAGCTGCCGGCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: WRSRRCSCTRAA*ASCLRRSCRRG Trigger: ACCCCGCCGGCAGCTCCGACGAAGACAAGAGGCTCACGCGGCCCGCGTACAGCTACATCGCCTTGATCGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506382.2 |
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| CDS TCA 72 bp | CGGAGCTGCCGGCGGGGTAGTCGTCGGCGTCGTAATTaGAGCAGTTGTAGGGATACTGCGAGCTGTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: RSCRRGSRRRRN*SSCRDTASCQT Trigger: TGTTTGACAGCTCGCAGTATCCCTACAACTGCTTCAATTACGACGCCGACGACTACCCCGCCGGCAGCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506382.2 |
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