RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXL2NB (Homo sapiens)

Ensembl gene IDs: ENSG00000206262

Ensembl transcript IDs: ENST00000383165.4, ENST00000470680.5, ENST00000498709.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGCGGAACCTGGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTaGGTGGTTCTAGCGAAGCGCTGCCTGCCTCAGAGCAGCCGCGAC +
Preference number: 1 (lower is better)
Translates to: TAEPGSGSRRRRGTS*VVLAKRCLPQSSRD
Trigger: GTCGCGGCTGCTCTGAGGCAGGCAGCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGGTTCCGCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR CCA 90 bp CGCCGGGTGTTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTaGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTGAGTGGTTCT +
Preference number: 1 (lower is better)
Translates to: RRVFRGPARKGDSGT*FRQPAAARDELSGS
Trigger: AGAACCACTCAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACACCCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR GCA 90 bp TTTGCTAGCCAAGCACCGCAGAGGCCATCCCTCCAAGCAGAGGGTTaGAGCAAGCTCTATTCTCTCCCGCTCAGGAGCGGGAAGCCGCCG +
Preference number: 1 (lower is better)
Translates to: FASQAPQRPSLQAEG*SKLYSLPLRSGKPP
Trigger: CGGCGGCTTCCCGCTCCTGAGCGGGAGAGAATAGAGCTTGCTGCAACCCTCTGCTTGGAGGGATGGCCTCTGCGGTGCTTGGCTAGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR CCA 90 bp GGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTaGAGACTGCAGGCCTTACCTTGCAAGCCAGCTGCCCTGAATGCA +
Preference number: 1 (lower is better)
Translates to: GEGLSLASPHGLACG*RLQALPCKPAALNA
Trigger: TGCATTCAGGGCAGCTGGCTTGCAAGGTAAGGCCTGCAGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp CAGAGGAAACTTGTCAGCAGCTCCCACCACCCTAGAATCCGCCTCTaGGAGCATCCCACGGGTCTTTGGAGGGAAGAGGGCCTCACTTGG +
Preference number: 1 (lower is better)
Translates to: QRKLVSSSHHPRIRL*EHPTGLWREEGLTW
Trigger: CCAAGTGAGGCCCTCTTCCCTCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGCTGACAAGTTTCCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp GCTCAGTACCTGAGCTTCTCTGTGGTCTGTGCGGCAGTCCCATCATaGAAACACCCAGGTGGCAGCCCAGTCACCCGAATCACAGGCCAA +
Preference number: 1 (lower is better)
Translates to: AQYLSFSVVCAAVPS*KHPGGSPVTRITGQ
Trigger: TTGGCCTGTGATTCGGGTGACTGGGCTGCCACCTGGGTGTTTTCATGATGGGACTGCCGCACAGACCACAGAGAAGCTCAGGTACTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 90 bp TCCCCTCATGGGTTAGCGTGCGGGTGGAGACTGCAGGCCTTACCTTaGAAGCCAGCTGCCCTGAATGCAGAGACTTCTCTGTTTCCAGTA +
Preference number: 1 (lower is better)
Translates to: SPHGLACGWRLQALP*KPAALNAETSLFPV
Trigger: TACTGGAAACAGAGAAGTCTCTGCATTCAGGGCAGCTGGCTTGCAAGGTAAGGCCTGCAGTCTCCACCCGCACGCTAACCCATGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 90 bp AGTGTATCTGGAACGTGCTCAGTACCTGAGCTTCTCTGTGGTCTGTaGGGCAGTCCCATCATGAAAACACCCAGGTGGCAGCCCAGTCAC +
Preference number: 1 (lower is better)
Translates to: SVSGTCSVPELLCGL*GSPIMKTPRWQPSH
Trigger: GTGACTGGGCTGCCACCTGGGTGTTTTCATGATGGGACTGCCGCACAGACCACAGAGAAGCTCAGGTACTGAGCACGTTCCAGATACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 90 bp CTTCTCTGTGGTCTGTGCGGCAGTCCCATCATGAAAACACCCAGGTaGCAGCCCAGTCACCCGAATCACAGGCCAAGGACATCAGAGAAT +
Preference number: 1 (lower is better)
Translates to: LLCGLCGSPIMKTPR*QPSHPNHRPRTSEN
Trigger: ATTCTCTGATGTCCTTGGCCTGTGATTCGGGTGACTGGGCTGCCACCTGGGTGTTTTCATGATGGGACTGCCGCACAGACCACAGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 90 bp GCTTCTCGGAGTCAGGCTTGTAAACCTGGAGCCCATTGGTCCTTCTaGACCGTGAGATGCGAAAGTGAGCAGCGTGTGAAAAGCCTTAGG +
Preference number: 1 (lower is better)
Translates to: ASRSQACKPGAHWSF*TVRCESEQRVKSLR
Trigger: CCTAAGGCTTTTCACACGCTGCTCACTTTCGCATCTCACGGTGCAGAAGGACCAATGGGCTCCAGGTTTACAAGCCTGACTCCGAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 90 bp CAGGCTTGTAAACCTGGAGCCCATTGGTCCTTCTGCACCGTGAGATaGGAAAGTGAGCAGCGTGTGAAAAGCCTTAGGGTCTGCACATTG +
Preference number: 1 (lower is better)
Translates to: QACKPGAHWSFCTVR*ESEQRVKSLRVCTL
Trigger: CAATGTGCAGACCCTAAGGCTTTTCACACGCTGCTCACTTTCGCATCTCACGGTGCAGAAGGACCAATGGGCTCCAGGTTTACAAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp CAGACCTGGTGCTATGTGGGTGTCTGCTGCTGCACCTTGTTGGTCTaGGCAGCAAACTCAGCAGAGTTTCGAGACAGAGATAAAGCCTGT +
Preference number: 1 (lower is better)
Translates to: QTWCYVGVCCCTLLV*AANSAEFRDRDKAC
Trigger: ACAGGCTTTATCTCTGTCTCGAAACTCTGCTGAGTTTGCTGCTCAGACCAACAAGGTGCAGCAGCAGACACCCACATAGCACCAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp CCTGTAATCCCAACACTTTGGGAAGTTGAAGCAGGCAAATCACCCTaGGCTCAGGAGCTCAAGACCAGTTGGGCCCACATGGTAAAACCC +
Preference number: 1 (lower is better)
Translates to: PVIPTLWEVEAGKSP*AQELKTSWAHMVKP
Trigger: GGGTTTTACCATGTGGGCCCAACTGGTCTTGAGCTCCTGAGCTCAGGGTGATTTGCCTGCTTCAACTTCCCAAAGTGTTGGGATTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 90 bp AATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGAGCCCATTaGTCCTTCTGCACCGTGAGATGCGAAAGTGAGCAGCGTGTGAAA +
Preference number: 1 (lower is better)
Translates to: NQQASRSQACKPGAH*SFCTVRCESEQRVK
Trigger: TTTCACACGCTGCTCACTTTCGCATCTCACGGTGCAGAAGGACCAATGGGCTCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 90 bp GGCTTCAGACCTGGTGCTATGTGGGTGTCTGCTGCTGCACCTTGTTaGTCTGAGCAGCAAACTCAGCAGAGTTTCGAGACAGAGATAAAG +
Preference number: 1 (lower is better)
Translates to: GFRPGAMWVSAAAPC*SEQQTQQSFETEIK
Trigger: CTTTATCTCTGTCTCGAAACTCTGCTGAGTTTGCTGCTCAGACCAACAAGGTGCAGCAGCAGACACCCACATAGCACCAGGTCTGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp AGTGGCCTGTGCATGTTAAAGTGTATCTGGAACGTGCTCAGTACCTaGGCTTCTCTGTGGTCTGTGCGGCAGTCCCATCATGAAAACACC +
Preference number: 1 (lower is better)
Translates to: SGLCMLKCIWNVLST*ASLWSVRQSHHENT
Trigger: GGTGTTTTCATGATGGGACTGCCGCACAGACCACAGAGAAGCTCAGGTACTGAGCACGTTCCAGATACACTTTAACATGCACAGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp CCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTaGACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGA +
Preference number: 1 (lower is better)
Translates to: PASLRPTGKALTVQS*TKWLWAIDVMRDIR
Trigger: TCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 90 bp AGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTaGAGAAAGGCAACAAGGCAACTTTTAAGAACACATCATGTTCCC +
Preference number: 1 (lower is better)
Translates to: SGGQSLCPSALTVWV*RKATRQLLRTHHVP
Trigger: GGGAACATGATGTGTTCTTAAAAGTTGCCTTGTTGCCTTTCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp GGGAGCTCAGTGAGACACTTAACAACAGGAAACAGCTCTCATGTGTaGGTTCTTCCCAGAGTAGGAGGTCGCTTCTCTTTCCTCTTCCTC +
Preference number: 1 (lower is better)
Translates to: GSSVRHLTTGNSSHV*VLPRVGGRFSFLFL
Trigger: GAGGAAGAGGAAAGAGAAGCGACCTCCTACTCTGGGAAGAACTCACACATGAGAGCTGTTTCCTGTTGTTAAGTGTCTCACTGAGCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp TTTCCAGTAAAGTCTAGTTTGAATGTTTCAGACAGGTCCTCACCATaGCTGGGAACTAGGGAGGTGTCCTTGCCCTTGCCTAAGGTTCAG +
Preference number: 1 (lower is better)
Translates to: FPVKSSLNVSDRSSP*LGTREVSLPLPKVQ
Trigger: CTGAACCTTAGGCAAGGGCAAGGACACCTCCCTAGTTCCCAGTCATGGTGAGGACCTGTCTGAAACATTCAAACTAGACTTTACTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 90 bp CCTTTTGAGGCAATATTGATTGGAAAAAGATATGAAGGAACCTTCTaGAGTGCCAGAAATGCTCCATATCTTGATCCAGGTGGTGGTTAC +
Preference number: 1 (lower is better)
Translates to: PFEAILIGKRYEGTF*SARNAPYLDPGGGY
Trigger: GTAACCACCACCTGGATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTCCAATCAATATTGCCTCAAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTaGACCAAAATCTCAGAAATTACCATTAAAGAACTTATCCATGTA +
Preference number: 1 (lower is better)
Translates to: KRLHTGYRVQCSGDK*TKISEITIKELIHV
Trigger: TACATGGATAAGTTCTTTAATGGTAATTTCTGAGATTTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GGGCCGCCGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCGGGACACCGAGTCCCTaGGGTGTGGGTGCAAAGGGC +
Preference number: 2 (lower is better)
Translates to: GPPEARGAGGFCRCCRIPGTPSP*GVGAKG
Trigger: GCCCTTTGCACCCACACCTCAGGGACTCGGTGTCCC...GGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCGGCGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp CGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCGGCCCTGGGAGGGAGTGAGTGCTaGCAGTTGTTGAGGCGTGGA +
Preference number: 2 (lower is better)
Translates to: RKPEARAASAAVAGFPALGGSEC*QLLRRG
Trigger: TCCACGCCTCAACAACTGTCAGCACTCACTCCCTCC...CAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR GCA 90 bp GCGGCGGCGCGGGACGAGCTGAGTGGTTCTAGCGAAGCGCTGCCTGCCTCAGAGTCCCTGAGGTGTGGGTaGAAAGGGCCCTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: AAARDELSGSSEALPASESLRCG*KGPCEG
Trigger: CCCCTCACAGGGCCCTTTGCACCCACACCTCAGGGA...CTCTGAGGCAGGCAGCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp GACAGCGGAACCTGGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTGAGTGGTAGTGCTGACAGTTGTTaGGGCGTGGAGTGTATGGGG +
Preference number: 2 (lower is better)
Translates to: DSGTWFRQPAAARDELSGSADSC*GVECMG
Trigger: CCCCATACACTCCACGCCTCAACAACTGTCAGCACT...ACCACTCAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp TCTCCCGCTCAGGAGCGGGAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGAAAGCCCGGCCCTGTTTTCTaGGCCTTCGAATGCCGGACA +
Preference number: 2 (lower is better)
Translates to: SPAQEREAAGCFGVPLGKPGPVF*AFECRT
Trigger: TGTCCGGCATTCGAAGGCTCAGAAAACAGGGCCGGG...CTTTCCTAGCGGGACCCCGAAACACCCGGCGGCTTCCCGCTCCTGAGCGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp GCGAAGCGCTGCCTGCCTCAGAGCAGCCGCGACGCTTCCCTAGTAGAGCTGGGCGTGGATGGAGTAACGTaGCCTGAGTGGAGGGACACC +
Preference number: 2 (lower is better)
Translates to: AKRCLPQSSRDASLVELGVDGVT*PEWRDT
Trigger: GGTGTCCCTCCACTCAGGTCACGTTACTCCATCCAC...GCCCAGCTCTACTAGGGAAGCGTCGCGGCTGCTCTGAGGCAGGCAGCGCTTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp GCGAAGCGCTGCCTGCCTCAGAGCAGCCGCGACGCTTCCCTAGTAGAGCTGGGCTGCCGGACAGCCATGTaGAGGCACATCTTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: AKRCLPQSSRDASLVELGCRTAM*RHILGR
Trigger: TCTCCCCAAGATGTGCCTTCACATGGCTGTCCGGCA...GCCCAGCTCTACTAGGGAAGCGTCGCGGCTGCTCTGAGGCAGGCAGCGCTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGAGGGACACCGAGTCCCTaGGGTGTGGGTGCAAAGGGC +
Preference number: 2 (lower is better)
Translates to: AAPTTLESASESIPRVFGGTPSP*GVGAKG
Trigger: GCCCTTTGCACCCACACCTCAGGGACTCGGTGTCCC...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTGGTTGGAGTAACGTGACCTaGGTGGAGGGACACCGAGTC +
Preference number: 2 (lower is better)
Translates to: EAAGCFGVPLGKGTAEPGWSNVT*VEGHRV
Trigger: GACTCGGTGTCCCTCCACTCAGGTCACGTTACTCCA...ACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACACCCGGCGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR CAA 90 bp CCTCTGAGAGCATCCCACGGGTCTTTGGAGGGAAGAGGGCCTCACTaGGCCCAGGACCCAGACCCTTCTGCCTTTTTCCCAGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PLRASHGSLEGRGPH*AQDPDPSAFFPVGL
Trigger: GAGGCCAACTGGGAAAAAGGCAGAAGGGTCTGGGTCCTGGGCCAAGTGAGGCCCTCTTCCCTCCAAAGACCCGTGGGATGCTCTCAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp TTCCCTTTGCTAGCCAAGCACCGCAGAGGCCATCCCTCCAAGCAGAGGGTTGCAGTTCTAGCGAAGCGCTaGCTGCCTCAGAGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: FPLLAKHRRGHPSKQRVAVLAKR*LPQSSR
Trigger: GCGGCTGCTCTGAGGCAGGCAGCGCTTCGCTAGAAC...TGCAACCCTCTGCTTGGAGGGATGGCCTCTGCGGTGCTTGGCTAGCAAAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR CCA 90 bp GTGTTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTGGTTCAGGCAGCCGTGTGAAGGCACATCTTaGGGAGACCGATTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: VFRGPARKGDSGTWFRQPCEGTS*GDRFQP
Trigger: GGGCTGGAATCGGTCTCCCCAAGATGTGCCTTCACA...CGGCTGCCTGAACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR CCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTATGAAAACACCCAGGTaGCAGCCCAGTCACCCGAAT +
Preference number: 2 (lower is better)
Translates to: GGRALSGIPSWVSVRVETMKTPR*QPSHPN
Trigger: ATTCGGGTGACTGGGCTGCCACCTGGGTGTTTTCAT...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp AGGGAGGTGTCCTTGCCCTTGCCTAAGGTTCAGCACCATGGCCATGCAGCTATAGGGGCCGGGAGGGAGTaGGTGCTGACAGTTGTTGAG +
Preference number: 2 (lower is better)
Translates to: REVSLPLPKVQHHGHAAIGAGRE*VLTVVE
Trigger: CTCAACAACTGTCAGCACTCACTCCCTCCCGGCCCC...TATAGCTGCATGGCCATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTCTCACTGTTCAGAGCTaGACAAAATGGCTTTGGGCC +
Preference number: 2 (lower is better)
Translates to: GGRALSGIPSWVSVRVETLTVQS*TKWLWA
Trigger: GGCCCAAAGCCATTTTGTTCAGCTCTGAACAGTGAG...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTGGGGCACATACTCCTTaGGACAAAATGGTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: GGRALSGIPSWVSVRVETGAHTP*DKMVLE
Trigger: CTCCAACACCATTTTGTCCCAAGGAGTATGTGCCCC...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGGGAGGGAGTGAGTGCTaGCAGTTGTTGAGGCGTGGA +
Preference number: 2 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELGGSEC*QLLRRG
Trigger: TCCACGCCTCAACAACTGTCAGCACTCACTCCCTCC...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGATGCACCTTGTTGGTCTaGGCAGCAAACTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: AAPTTLESASESIPRVFGCTLLV*AANSAE
Trigger: CTCTGCTGAGTTTGCTGCTCAGACCAACAAGGTGCA...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CAA 90 bp ATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTGCAGGCCTTACCTaGCAAGCCAGCTGCCCTGAATGCAGAGACTTCTCTGTTTCCAGT +
Preference number: 2 (lower is better)
Translates to: IPSWVSVRVETAGLT*QASCPECRDFSVSS
Trigger: ACTGGAAACAGAGAAGTCTCTGCATTCAGGGCAGCTGGCTTGCAAGGTAAGGCCTGCAGTCTCCACCCGCACGCTAACCCATGAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGAAACGTGCTCAGTACCTaGGCTTCTCTGTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRNVLST*ASLWSV
Trigger: CACAGACCACAGAGAAGCTCAGGTACTGAGCACGTT...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp CAGTTGTTGAGGCGTGGAGTGTATGGGGATGTACTAATAGACACAGTGAAGCTTCGGCGCGGGACGAGCTaGGTGGTTCTAGCGAAGCGC +
Preference number: 2 (lower is better)
Translates to: QLLRRGVYGDVLIDTVKLRRGTS*VVLAKR
Trigger: GCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCG...AAGCTTCACTGTGTCTATTAGTACATCCCCATACACTCCACGCCTCAACAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR GCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGTTCTGCACCGTGAGATaGGAAAGTGAGCAGCGTGTG +
Preference number: 2 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELFCTVR*ESEQRV
Trigger: CACACGCTGCTCACTTTCGCATCTCACGGTGCAGAA...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGAAAAAAGGCCGACAACTaGCCTGCATTCTGCCTGATT +
Preference number: 2 (lower is better)
Translates to: AAPTTLESASESIPRVFGKKADN*PAFCLI
Trigger: AATCAGGCAGAATGCAGGGCAGTTGTCGGCCTTTTT...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTTCCCAAGCACATATGTaGGTAACTGACTTTGCTAAT +
Preference number: 2 (lower is better)
Translates to: GGRALSGIPSWVSVRVETSQAHM*VTDFAN
Trigger: ATTAGCAAAGTCAGTTACTCACATATGTGCTTGGGA...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGATGTGTGAGTGGCCTGTaGATGTTAAAGTGTATCTGG +
Preference number: 2 (lower is better)
Translates to: AAPTTLESASESIPRVFGCVSGL*MLKCIW
Trigger: CCAGATACACTTTAACATGCACAGGCCACTCACACA...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGAGTGGATGGAGTAACGTaGCCTGAGTGGAGGGACACC +
Preference number: 2 (lower is better)
Translates to: PRTSENQQASRSQACKPGVDGVT*PEWRDT
Trigger: GGTGTCCCTCCACTCAGGTCACGTTACTCCATCCAC...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp CCATCCCTCCAAGCAGAGGGTTGCAGCAAGCTCTATTCTCTCCCGCTCAGGAGCGTCTGCACATTGGCTTaGCATGTTTTCCACCAACAT +
Preference number: 2 (lower is better)
Translates to: PSLQAEGCSKLYSLPLRSVCTLA*HVFHQH
Trigger: ATGTTGGTGGAAAACATGTCAAGCCAATGTGCAGAC...GCTCCTGAGCGGGAGAGAATAGAGCTTGCTGCAACCCTCTGCTTGGAGGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAGCCCTGCATTCTGCCTaGTTGACGATGGGGCACATA +
Preference number: 2 (lower is better)
Translates to: KVPALWEKIEPGMRTKGEALHSA*LTMGHI
Trigger: TATGTGCCCCATCGTCAATCAGGCAGAATGCAGGGC...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGAGGAGCCCAGAGCTCTaGTCTACTGCCTCTCAAGCC +
Preference number: 2 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLRSPEL*STASQA
Trigger: GGCTTGAGAGGCAGTAGACCAGAGCTCTGGGCTCCT...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAGCCCATTGGTCCTTCTaGACCGTGAGATGCGAAAGT +
Preference number: 2 (lower is better)
Translates to: KVPALWEKIEPGMRTKGEAHWSF*TVRCES
Trigger: ACTTTCGCATCTCACGGTGCAGAAGGACCAATGGGC...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAATTAAGCCCATCCTGGTaGGGAGCACTGAGTGAGAAG +
Preference number: 2 (lower is better)
Translates to: KVPALWEKIEPGMRTKGELSPSW*GALSEK
Trigger: CTTCTCACTCAGTGCTCCCCACCAGGATGGGCTTAA...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CAA 90 bp AAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAACTaGTCAGCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATC +
Preference number: 2 (lower is better)
Translates to: KWLWAIDVMRDIRGN*SAAPTTLESASESI
Trigger: GATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGCTGACAAGTTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp TTCCCTTTGCTAGCCAAGCACCGCAGAGGCCATCCCTCCAAGCAGAGGGTTGCAAACATGTGCAAAATCTaGATTAGTACGTGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: FPLLAKHRRGHPSKQRVANMCKI*ISTCSW
Trigger: CCAGCTACACGTACTAATTCAGATTTTGCACATGTT...TGCAACCCTCTGCTTGGAGGGATGGCCTCTGCGGTGCTTGGCTAGCAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR GCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAGGCTTCTGCCGCTGTTaGAGGATTCCCGGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: PPTCAKSELVRVAGECERGFCRC*RIPGPV
Trigger: AACAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCC...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR CCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAACTCTCAAGCCCTTCCTaGGGGAGAAAGAGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKLSSPS*GRKRGA
Trigger: AGCTCCCCTCTTTCTCCCCCAGGAAGGGCTTGAGAG...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAAAGTGCTGACAGTTGTTaGGGCGTGGAGTGTATGGGG +
Preference number: 2 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKSADSC*GVECMG
Trigger: CCCCATACACTCCACGCCTCAACAACTGTCAGCACT...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGTCCCTGAGGTGTGGGTaGAAAGGGCCCTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMSLRCG*KGPCEG
Trigger: CCCCTCACAGGGCCCTTTGCACCCACACCTCAGGGA...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAACTAGGGAGGTGTCCTTaGCCTTGCCTAAGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKLGRCP*PCLRFS
Trigger: GCTGAACCTTAGGCAAGGGCAAGGACACCTCCCTAG...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GTTGTTGAGGCGTGGAGTGTATGGGGATGTACTAATAGACACAGTGAAGCTTCCAAAGTGAGCAGCGTGTaGAAAGCCTTAGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: VVEAWSVWGCTNRHSEASKVSSV*KALGSA
Trigger: TGCAGACCCTAAGGCTTTTCACACGCTGCTCACTTT...GGAAGCTTCACTGTGTCTATTAGTACATCCCCATACACTCCACGCCTCAACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGGGTCCTTCTGCACCGTaGGATGCGAAAGTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVGPSAP*DAKVSS
Trigger: GCTGCTCACTTTCGCATCTCACGGTGCAGAAGGACC...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GAGCTGAACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAAAGTTGGCCTCCACCATaGAAAAGGCCGACAACTGCC +
Preference number: 2 (lower is better)
Translates to: ELNKMALGHRCHEGYQRKSWPPP*KRPTTA
Trigger: GGCAGTTGTCGGCCTTTTTCATGGTGGAGGCCAACT...TTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGAGTGTATCTGGAACGTaGTCAGTACCTGAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLSVSGT*SVPELL
Trigger: GAGAAGCTCAGGTACTGAGCACGTTCCAGATACACT...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGCAGACTAATACCCACTaGCTTCAGACCTGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLQTNTH*LQTWCY
Trigger: ATAGCACCAGGTCTGAAGCCAGTGGGTATTAGTCTG...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGCATCCCACGGGTCTTTaGAGGGAAGAGGGCCTCACT +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVHPTGL*REEGLT
Trigger: AGTGAGGCCCTCTTCCCTCCAAAGACCCGTGGGATG...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGACGTGAGATGCGAAAGTaGGCAGCGTGTGAAAAGCCT +
Preference number: 2 (lower is better)
Translates to: PPTCAKSELVRVAGECERREMRK*AACEKP
Trigger: AGGCTTTTCACACGCTGCTCACTTTCGCATCTCACG...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGACAGGTCCTCACCATaGCTGGGAACTAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMDRSSP*LGTREV
Trigger: CACCTCCCTAGTTCCCAGTCATGGTGAGGACCTGTC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAACTTCTCTGTGGTCTGTaGGGCAGTCCCATCATGAAA +
Preference number: 2 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKLLCGL*GSPIMK
Trigger: TTTCATGATGGGACTGCCGCACAGACCACAGAGAAG...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAGCTGCTGCACCTTGTTaGTCTGAGCAGCAAACTCAG +
Preference number: 2 (lower is better)
Translates to: PPTCAKSELVRVAGECERAAAPC*SEQQTQ
Trigger: CTGAGTTTGCTGCTCAGACCAACAAGGTGCAGCAGC...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAGCATTAAGCCCATCCTaGTGGGGAGCACTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGALSPS*WGALSE
Trigger: CTCACTCAGTGCTCCCCACCAGGATGGGCTTAATGC...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGCTCCCTCCCTTCCTCTaGACTTTGTGCCAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMLPPFL*TLCQLG
Trigger: GCCTAGCTGGCACAAAGTCCAGAGGAAGGGAGGGAG...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCTGGAGTAACGTGACCTaGGTGGAGGGACACCGAGTC +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIWSNVT*VEGHRV
Trigger: GACTCGGTGTCCCTCCACTCAGGTCACGTTACTCCA...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCCCTAGAATCCGCCTCTaGGAGCATCCCACGGGTCTT +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIPRIRL*EHPTGL
Trigger: AAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGG...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGCAAGCCAGCTGCCCTaGATGCAGAGACTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMASQLP*MQRLLC
Trigger: ACAGAGAAGTCTCTGCATTCAGGGCAGCTGGCTTGC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGAAATTGAGCCAGGAATaGGGACCAAGGGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMKLSQE*GPRGKG
Trigger: GCCCTTCCCCCTTGGTCCTCATTCCTGGCTCAATTT...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAGGCAGGAGAATCACTTaGACTCAGGAGGCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGGRRIT*TQEAAV
Trigger: TACTGCAGCCTCCTGAGTTCAAGTGATTCTCCTGCC...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGTGCTATGTGGGTGTCTaGTGCTGCACCTTGTTGGTC +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVCYVGV*CCTLLV
Trigger: GACCAACAAGGTGCAGCAGCAGACACCCACATAGCA...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCGGAGGGCAGAGTCTCTaGCCATCAGCGCTTACAGTC +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIGGQSL*PSALTV
Trigger: GACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCC...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGAGGTGTCCTTGCCCTTaGCTAAGGTTCAGCACCATG +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVRCPCP*LRFSTM
Trigger: CATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCT...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGGCCAGCTGCCCTGAATaGAGAGACTTCTCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVASCPE*RDFSVS
Trigger: GGAAACAGAGAAGTCTCTGCATTCAGGGCAGCTGGC...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAAGTCTGCACATTGGCTTaGCATGTTTTCCACCAACAT +
Preference number: 2 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKVCTLA*HVFHQH
Trigger: ATGTTGGTGGAAAACATGTCAAGCCAATGTGCAGAC...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGAAAGTGAGCAGCGTGTaGAAAGCCTTAGGGTCTGCA +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVKVSSV*KALGSA
Trigger: TGCAGACCCTAAGGCTTTTCACACGCTGCTCACTTT...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAATCAGCACCATGGCCATaGAGCTATAATAACCCCAAA +
Preference number: 2 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKSAPWP*SYNNPK
Trigger: TTTGGGGTTATTATAGCTGCATGGCCATGGTGCTGA...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCCTGCAGGCCTTACCTTaGAAGCCAGCTGCCCTGAAT +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILILQALP*KPAALN
Trigger: ATTCAGGGCAGCTGGCTTGCAAGGTAAGGCCTGCAG...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGAAACCTGGAGCCCATTaGTCCTTCTGCACCGTGAGA +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMKPGAH*SFCTVR
Trigger: TCTCACGGTGCAGAAGGACCAATGGGCTCCAGGTTT...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCAGACCTGGTGCTATGTaGGTGTCTGCTGCTGCACCT +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIRPGAM*VSAAAP
Trigger: AGGTGCAGCAGCAGACACCCACATAGCACCAGGTCT...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGATCAGCGCTTACAGTCTaGGTGTGGAGAAAGGCAACA +
Preference number: 2 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGSALTV*VWRKAT
Trigger: TGTTGCCTTTCTCCACACCCAGACTGTAAGCGCTGA...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAACAGTTGTTGAGGCGTaGAGTGTATGGGGATGTACT +
Preference number: 2 (lower is better)
Translates to: PPTCAKSELVRVAGECERTVVEA*SVWGCT
Trigger: AGTACATCCCCATACACTCCACGCCTCAACAACTGT...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR TCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCTGCATTCTGCCTGATTaGCGATGGGGCACATACTCC +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILICILPD*RWGTYS
Trigger: GGAGTATGTGCCCCATCGTCAATCAGGCAGAATGCA...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGACTTACAGTCTGGGTGTaGAGAAAGGCAACAAGGCAA +
Preference number: 2 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGLTVWV*RKATRQ
Trigger: TTGCCTTGTTGCCTTTCTCCACACCCAGACTGTAAG...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGTCTCAGATCCTGAGCTaGCTGTCAATGATCAAACCG +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVSQILS*LSMIKP
Trigger: CGGTTTGATCATTGACAGCCAGCTCAGGATCTGAGA...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGTCACAGCAACCTGGATaGAGCTGGAGACCATTATAC +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVSQQPG*SWRPLY
Trigger: GTATAATGGTCTCCAGCTCCATCCAGGTTGCTGTGA...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp GAGCTGAACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAAAACATGTGCAAAATCTaGATTAGTACGTGTAGCTGG +
Preference number: 2 (lower is better)
Translates to: ELNKMALGHRCHEGYQRKNMCKI*ISTCSW
Trigger: CCAGCTACACGTACTAATTCAGATTTTGCACATGTT...TTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCTTGAACTCAGGAGGCTaGAGTAAGCCAAGTTCATGC +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILILNSGG*SKPSSC
Trigger: GCATGAACTTGGCTTACTGCAGCCTCCTGAGTTCAA...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGTTAGGGTCTGCACATTaGCTTGACATGTTTTCCACC +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMLGSAH*LDMFST
Trigger: GGTGGAAAACATGTCAAGCCAATGTGCAGACCCTAA...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCCTCCTTGGGACAAAATaGTGTTGGAGGACTCATACC +
Preference number: 2 (lower is better)
Translates to: EKDMKEPSEVPEMLHILILLGTK*CWRTHT
Trigger: GGTATGAGTCCTCCAACACCATTTTGTCCCAAGGAG...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR TCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGGATTGGAAAAAGATATaGAGGAACCTTCTGAAGTGC +
Preference number: 2 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVDWKKI*RNLLKC
Trigger: GCACTTCAGAAGGTTCCTTCATATCTTTTTCCAATC...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CAA 90 bp AAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTaGATCCAGGTGGTGGTTACATACTGCATTACATGTCAGAATACA +
Preference number: 2 (lower is better)
Translates to: KDMKEPSEVPEMLHI*IQVVVTYCITCQNT
Trigger: TGTATTCTGACATGTAATGCAGTATGTAACCACCACCTGGATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR GCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGGTGGTTACATACTaGATTACATGTCAGAATACA +
Preference number: 2 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMVVVTY*ITCQNT
Trigger: TGTATTCTGACATGTAATGCAGTATGTAACCACCAC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 72 bp CCTGGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTaGGTGGTTCTAGCGAAGCGCTGCCTGCCTCAGAGC +
Preference number: 3 (lower is better)
Translates to: PGSGSRRRRGTS*VVLAKRCLPQS
Trigger: GCTCTGAGGCAGGCAGCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR CCA 72 bp TTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTaGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTG +
Preference number: 3 (lower is better)
Translates to: FRGPARKGDSGT*FRQPAAARDEL
Trigger: CAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR CAA 90 bp TCTAGCGAAGCGCTGCCTGCCTCAGAGCAGCCGCGACGCTTCCCTAGTAGAGCTCGGCTTCTGCCGCTGTaGCAGGATTCCCGGCCCTGT +
Preference number: 3 (lower is better)
Translates to: SSEALPASEQPRRFPSRARLLPL*QDSRPC
Trigger: ACAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCG...AGCTCTACTAGGGAAGCGTCGCGGCTGCTCTGAGGCAGGCAGCGCTTCGCTAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR GCA 72 bp CAAGCACCGCAGAGGCCATCCCTCCAAGCAGAGGGTTaGAGCAAGCTCTATTCTCTCCCGCTCAGGAGCGGG +
Preference number: 3 (lower is better)
Translates to: QAPQRPSLQAEG*SKLYSLPLRSG
Trigger: CCCGCTCCTGAGCGGGAGAGAATAGAGCTTGCTGCAACCCTCTGCTTGGAGGGATGGCCTCTGCGGTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR CCA 72 bp CTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTaGAGACTGCAGGCCTTACCTTGCAAGCCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: LSLASPHGLACG*RLQALPCKPAA
Trigger: GGCAGCTGGCTTGCAAGGTAAGGCCTGCAGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 72 bp CTTGTCAGCAGCTCCCACCACCCTAGAATCCGCCTCTaGGAGCATCCCACGGGTCTTTGGAGGGAAGAGGGC +
Preference number: 3 (lower is better)
Translates to: LVSSSHHPRIRL*EHPTGLWREEG
Trigger: GCCCTCTTCCCTCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGCTGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 72 bp CCTTCGAATGCCGGACAGCCATGTGAAGGCACATCTTaGGGAGACCGATTCCAGCCCTTCCCAGGGTGCACG +
Preference number: 3 (lower is better)
Translates to: PSNAGQPCEGTS*GDRFQPFPGCT
Trigger: CGTGCACCCTGGGAAGGGCTGGAATCGGTCTCCCCAAGATGTGCCTTCACATGGCTGTCCGGCATTCGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR TCA 72 bp GGAGAAGGAGAGAGAAGTGGATGGAGTAACGTGACCTaGGTGGAGGGACACCGAGTCCCTGAGGTGTGGGTG +
Preference number: 3 (lower is better)
Translates to: GEGERSGWSNVT*VEGHRVPEVWV
Trigger: CACCCACACCTCAGGGACTCGGTGTCCCTCCACTCAGGTCACGTTACTCCATCCACTTCTCTCTCCTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
3UTR TCA 72 bp CTGAGCTTCTCTGTGGTCTGTGCGGCAGTCCCATCATaGAAACACCCAGGTGGCAGCCCAGTCACCCGAATC +
Preference number: 3 (lower is better)
Translates to: LSFSVVCAAVPS*KHPGGSPVTRI
Trigger: GATTCGGGTGACTGGGCTGCCACCTGGGTGTTTTCATGATGGGACTGCCGCACAGACCACAGAGAAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp GGTCCTCACCATGACTGGGAACTAGGGAGGTGTCCTTaGCCTTGCCTAAGGTTCAGCACCATGGCCATGCAG +
Preference number: 3 (lower is better)
Translates to: GPHHDWELGRCP*PCLRFSTMAMQ
Trigger: CTGCATGGCCATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCTCCCTAGTTCCCAGTCATGGTGAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp GGAACGTGCTCAGTACCTGAGCTTCTCTGTGGTCTGTaGGGCAGTCCCATCATGAAAACACCCAGGTGGCAG +
Preference number: 3 (lower is better)
Translates to: GTCSVPELLCGL*GSPIMKTPRWQ
Trigger: CTGCCACCTGGGTGTTTTCATGATGGGACTGCCGCACAGACCACAGAGAAGCTCAGGTACTGAGCACGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp TCCCAGTTGGCCTCCACCATGAAAAAGGCCGACAACTaGCCTGCATTCTGCCTGATTGACGATGGGGCACAT +
Preference number: 3 (lower is better)
Translates to: SQLASTMKKADN*PAFCLIDDGAH
Trigger: ATGTGCCCCATCGTCAATCAGGCAGAATGCAGGGCAGTTGTCGGCCTTTTTCATGGTGGAGGCCAACTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 72 bp GCTTCTCGGAGTCAGGCTTGTAAACCTGGAGCCCATTaGTCCTTCTGCACCGTGAGATGCGAAAGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: ASRSQACKPGAH*SFCTVRCESEQ
Trigger: CTGCTCACTTTCGCATCTCACGGTGCAGAAGGACCAATGGGCTCCAGGTTTACAAGCCTGACTCCGAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp AAACCTGGAGCCCATTGGTCCTTCTGCACCGTGAGATaGGAAAGTGAGCAGCGTGTGAAAAGCCTTAGGGTC +
Preference number: 3 (lower is better)
Translates to: KPGAHWSFCTVR*ESEQRVKSLRV
Trigger: GACCCTAAGGCTTTTCACACGCTGCTCACTTTCGCATCTCACGGTGCAGAAGGACCAATGGGCTCCAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp TCCACCATGAAAAAGGCCGACAACTGCCCTGCATTCTaGCTGATTGACGATGGGGCACATACTCCTTGGGAC +
Preference number: 3 (lower is better)
Translates to: STMKKADNCPAF*LIDDGAHTPWD
Trigger: GTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGCAGGGCAGTTGTCGGCCTTTTTCATGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp CGGGTGGAGACTGCAGGCCTTACCTTGCAAGCCAGCTaGCCTGAATGCAGAGACTTCTCTGTTTCCAGTAAA +
Preference number: 3 (lower is better)
Translates to: RVETAGLTLQAS*PECRDFSVSSK
Trigger: TTTACTGGAAACAGAGAAGTCTCTGCATTCAGGGCAGCTGGCTTGCAAGGTAAGGCCTGCAGTCTCCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 72 bp CCTGGTGCTATGTGGGTGTCTGCTGCTGCACCTTGTTaGTCTGAGCAGCAAACTCAGCAGAGTTTCGAGACA +
Preference number: 3 (lower is better)
Translates to: PGAMWVSAAAPC*SEQQTQQSFET
Trigger: TGTCTCGAAACTCTGCTGAGTTTGCTGCTCAGACCAACAAGGTGCAGCAGCAGACACCCACATAGCACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 72 bp AGACTAATACCCACTGGCTTCAGACCTGGTGCTATGTaGGTGTCTGCTGCTGCACCTTGTTGGTCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: RLIPTGFRPGAM*VSAAAPCWSEQ
Trigger: CTGCTCAGACCAACAAGGTGCAGCAGCAGACACCCACATAGCACCAGGTCTGAAGCCAGTGGGTATTAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp AGGGAGGTGTCCTTGCCCTTGCCTAAGGTTCAGCACCATGGCCATGCAGCTATACTGCCTTTTTCCCAGTaGGCCTCCACCATGAAAAAG +
Preference number: 3 (lower is better)
Translates to: REVSLPLPKVQHHGHAAILPFSQ*ASTMKK
Trigger: CTTTTTCATGGTGGAGGCCAACTGGGAAAAAGGCAG...TATAGCTGCATGGCCATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 72 bp ACTTTGCTAATCCCAACCAGGCAGACTAATACCCACTaGCTTCAGACCTGGTGCTATGTGGGTGTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: TLLIPTRQTNTH*LQTWCYVGVCC
Trigger: GCAGCAGACACCCACATAGCACCAGGTCTGAAGCCAGTGGGTATTAGTCTGCCTGGTTGGGATTAGCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 72 bp TGCTATGTGGGTGTCTGCTGCTGCACCTTGTTGGTCTaGGCAGCAAACTCAGCAGAGTTTCGAGACAGAGAT +
Preference number: 3 (lower is better)
Translates to: CYVGVCCCTLLV*AANSAEFRDRD
Trigger: ATCTCTGTCTCGAAACTCTGCTGAGTTTGCTGCTCAGACCAACAAGGTGCAGCAGCAGACACCCACATAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 72 bp CTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTaGACAAAATGGCTTTGGGCCATAGATGTCATGAGG +
Preference number: 3 (lower is better)
Translates to: LRPTGKALTVQS*TKWLWAIDVMR
Trigger: CCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGCATCCCACGGGTCTTaGGAGGGAAGAGGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMASHGS*EGRGPH
Trigger: GTGAGGCCCTCTTCCCTCCAAAGACCCGTGGGATGC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAAACTAGGGAGGTGTCCTaGCCCTTGCCTAAGGTTCAG +
Preference number: 3 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKTREVS*PLPKVQ
Trigger: CTGAACCTTAGGCAAGGGCAAGGACACCTCCCTAGT...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 72 bp TGCATGTTAAAGTGTATCTGGAACGTGCTCAGTACCTaGGCTTCTCTGTGGTCTGTGCGGCAGTCCCATCAT +
Preference number: 3 (lower is better)
Translates to: CMLKCIWNVLST*ASLWSVRQSHH
Trigger: ATGATGGGACTGCCGCACAGACCACAGAGAAGCTCAGGTACTGAGCACGTTCCAGATACACTTTAACATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 72 bp AAGTCTAGTTTGAATGTTTCAGACAGGTCCTCACCATaGCTGGGAACTAGGGAGGTGTCCTTGCCCTTGCCT +
Preference number: 3 (lower is better)
Translates to: KSSLNVSDRSSP*LGTREVSLPLP
Trigger: AGGCAAGGGCAAGGACACCTCCCTAGTTCCCAGTCATGGTGAGGACCTGTCTGAAACATTCAAACTAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGAGAACTAGAGGGGATTaGGAGTTGACAGAGGGAGAA +
Preference number: 3 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLRTRGD*ELTEGE
Trigger: TTCTCCCTCTGTCAACTCCAAATCCCCTCTAGTTCT...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp CAGTTGTTGAGGCGTGGAGTGTATGGGGATGTACTAATAGACACAGTGAAGCTTGGTCTGCACATTGGCTaGACATGTTTTCCACCAACA +
Preference number: 3 (lower is better)
Translates to: QLLRRGVYGDVLIDTVKLGLHIG*TCFPPT
Trigger: TGTTGGTGGAAAACATGTCAAGCCAATGTGCAGACC...AAGCTTCACTGTGTCTATTAGTACATCCCCATACACTCCACGCCTCAACAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR-3UTR CAA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGAGGCAGGAGAATCACTaGAACTCAGGAGGCTGCAGT +
Preference number: 3 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVRQENH*NSGGCS
Trigger: ACTGCAGCCTCCTGAGTTCAAGTGATTCTCCTGCCT...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp TTTCGAGACAGAGATAAAGCCTGTGTGAGTGGCCTGTaGATGTTAAAGTGTATCTGGAACGTGCTCAGTACC +
Preference number: 3 (lower is better)
Translates to: FRDRDKACVSGL*MLKCIWNVLST
Trigger: GGTACTGAGCACGTTCCAGATACACTTTAACATGCACAGGCCACTCACACAGGCTTTATCTCTGTCTCGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGATGGGGCACATACTCCTaGGGACAAAATGGTGTTGGA +
Preference number: 3 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGWGTYS*GQNGVG
Trigger: TCCAACACCATTTTGTCCCAAGGAGTATGTGCCCCA...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAGGTCTGCACATTGGCTaGACATGTTTTCCACCAACA +
Preference number: 3 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGGLHIG*TCFPPT
Trigger: TGTTGGTGGAAAACATGTCAAGCCAATGTGCAGACC...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCTGGGACAAAATGGTGTaGGAGGACTCATACCCCAAC +
Preference number: 3 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIWDKMV*EDSYPN
Trigger: GTTGGGGTATGAGTCCTCCAACACCATTTTGTCCCA...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp CACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTaGACCAAAATCTCAGAAATTACCATTAAAGAACTT +
Preference number: 3 (lower is better)
Translates to: HTGYRVQCSGDK*TKISEITIKEL
Trigger: AAGTTCTTTAATGGTAATTTCTGAGATTTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR GCA 72 bp AGGGATAAAAGATTACACACTGGGTACCGTGTACAATaGTCGGGTGACAAGTGCACCAAAATCTCAGAAATT +
Preference number: 3 (lower is better)
Translates to: RDKRLHTGYRVQ*SGDKCTKISEI
Trigger: AATTTCTGAGATTTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTTATCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR-3UTR CAA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCCCAGTAAAGTCTAGTTaGAATGTTTCAGACAGGTCC +
Preference number: 3 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIPVKSS*NVSDRS
Trigger: GGACCTGTCTGAAACATTCAAACTAGACTTTACTGG...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR TCA 72 bp AGCAACCTGGATGGAGCTGGAGACCATTATACTAAGTaGAGTAACTCAAGTATGGAAAACCAAATATCCTGT +
Preference number: 3 (lower is better)
Translates to: SNLDGAGDHYTK*SNSSMENQISC
Trigger: ACAGGATATTTGGTTTTCCATACTTGAGTTACTTCACTTAGTATAATGGTCTCCAGCTCCATCCAGGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CCA 72 bp ATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTaGATGGAGCTGGAGACCATTATACTAAGTGAAGTA +
Preference number: 3 (lower is better)
Translates to: IKRNKIMAFTAT*MELETIILSEV
Trigger: TACTTCACTTAGTATAATGGTCTCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp CGCCGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCGGCCGAGCTTCCTGGGCTTTaGCCGGGTGCGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: RRKPEARAASAAVAGFPAELPGL*PGAGRP
Trigger: GGGTCTGCCCGCACCCGGCCAAAGCCCAGGAAGCTC...GGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCGGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CCA 90 bp GGGCCGCCGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCAGCCGCGAGGAGGCTTaGAGCGCCTTTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GPPEARGAGGFCRCCRIPSREEA*SAFPRW
Trigger: CCAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCT...GGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCGGCGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GACAGCGGAACCTGGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTGAGTGGTCGGCGCGGGACGAGCTaGGTGGTTCTAGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: DSGTWFRQPAAARDELSGRRGTS*VVLAKR
Trigger: GCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCG...ACCACTCAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GACAGCGGAACCTGGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTGAGTGGTGGGACACCGAGTCCCTaGGGTGTGGGTGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: DSGTWFRQPAAARDELSGGTPSP*GVGAKG
Trigger: GCCCTTTGCACCCACACCTCAGGGACTCGGTGTCCC...ACCACTCAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR GCA 90 bp GGGTGTTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTGGTTCAGGCAGCTGGGCTTTGGCCGGGTaGGGGCAGACCCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: GCFGVPLGKGTAEPGSGSWALAG*GQTPPG
Trigger: CCCCGGTGGGGTCTGCCCGCACCCGGCCAAAGCCCA...GCTGCCTGAACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CCA 90 bp GAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTGGTGGGGACAGCGGAACCTaGTTCAGGCAGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: EAAGCFGVPLGKGTAEPGGDSGT*FRQPAA
Trigger: CGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTCCCC...ACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACACCCGGCGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp CGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCGGCCCTGTGCCGGACAGCCATGTaGAGGCACATCTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RKPEARAASAAVAGFPALCRTAM*RHILGR
Trigger: TCTCCCCAAGATGTGCCTTCACATGGCTGTCCGGCA...CAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
3UTR CAA 72 bp GCCGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTaGCAGGATTCCCGGCCCTGTTTTCTGAGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: AGSPRRGRLLPL*QDSRPCFLSLR
Trigger: TCGAAGGCTCAGAAAACAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CCA 90 bp TCTAGCGAAGCGCTGCCTGCCTCAGAGCAGCCGCGACGCTTCCCTAGTAGAGCTAGCCTGGCTGTCGGCTaGGCCCCTGAGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSEALPASEQPRRFPSRASLAVG*APEARW
Trigger: CCAGCGAGCCTCAGGGGCCCAGCCGACAGCCAGGCT...AGCTCTACTAGGGAAGCGTCGCGGCTGCTCTGAGGCAGGCAGCGCTTCGCTAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GCGGCGGCGCGGGACGAGCTGAGTGGTTCTAGCGAAGCGCTGCCTGCCTCAGAGTGGAGTAACGTGACCTaGGTGGAGGGACACCGAGTC +
Preference number: 4 (lower is better)
Translates to: AAARDELSGSSEALPASEWSNVT*VEGHRV
Trigger: GACTCGGTGTCCCTCCACTCAGGTCACGTTACTCCA...CTCTGAGGCAGGCAGCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GGGCCGCCGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCAAAGTGAGCAGCGTGTaGAAAGCCTTAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GPPEARGAGGFCRCCRIPKVSSV*KALGSA
Trigger: TGCAGACCCTAAGGCTTTTCACACGCTGCTCACTTT...GGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCGGCGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GCGGCGGCGCGGGACGAGCTGAGTGGTTCTAGCGAAGCGCTGCCTGCCTCAGAGAGTGCTGACAGTTGTTaGGGCGTGGAGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: AAARDELSGSSEALPASESADSC*GVECMG
Trigger: CCCCATACACTCCACGCCTCAACAACTGTCAGCACT...CTCTGAGGCAGGCAGCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp TCTCCCGCTCAGGAGCGGGAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGAAAGGGAGGGAGTGAGTGCTaGCAGTTGTTGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: SPAQEREAAGCFGVPLGKGGSEC*QLLRRG
Trigger: TCCACGCCTCAACAACTGTCAGCACTCACTCCCTCC...CTTTCCTAGCGGGACCCCGAAACACCCGGCGGCTTCCCGCTCCTGAGCGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR GCA 90 bp TTCTCTCCCGCTCAGGAGCGGGAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGAGGCCGGTCCAGGCTGTaGGGGGCGTTTACAAAAAGT +
Preference number: 4 (lower is better)
Translates to: FSPAQEREAAGCFGVPLGGRSRL*GAFTKS
Trigger: ACTTTTTGTAAACGCCCCGCACAGCCTGGACCGGCC...TCCTAGCGGGACCCCGAAACACCCGGCGGCTTCCCGCTCCTGAGCGGGAGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCGGCCCTGTTTTCTGAGCCTGTGGATGGAGTAACGTaGCCTGAGTGGAGGGACACC +
Preference number: 4 (lower is better)
Translates to: ARAASAAVAGFPALFSEPVDGVT*PEWRDT
Trigger: GGTGTCCCTCCACTCAGGTCACGTTACTCCATCCAC...AGGCTCAGAAAACAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR GCA 90 bp AGTGGTTCTAGCGAAGCGCTGCCTGCCTCAGAGCAGCCGCGACGCTTCCCTAGTGTTCTAGCGAAGCGCTaGCTGCCTCAGAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGSSEALPASEQPRRFPSVLAKR*LPQSSR
Trigger: GCGGCTGCTCTGAGGCAGGCAGCGCTTCGCTAGAAC...ACTAGGGAAGCGTCGCGGCTGCTCTGAGGCAGGCAGCGCTTCGCTAGAACCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CCA 90 bp TTCCCTTTGCTAGCCAAGCACCGCAGAGGCCATCCCTCCAAGCAGAGGGTTGCAAGCGCCTTTCCTCGCTaGGGCCCGAGCTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPLLAKHRRGHPSKQRVASAFPR*GPSFLG
Trigger: GCCCAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCT...TGCAACCCTCTGCTTGGAGGGATGGCCTCTGCGGTGCTTGGCTAGCAAAGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTGTGGATGGAGTAACGTaGCCTGAGTGGAGGGACACC +
Preference number: 4 (lower is better)
Translates to: GGRALSGIPSWVSVRVETVDGVT*PEWRDT
Trigger: GGTGTCCCTCCACTCAGGTCACGTTACTCCATCCAC...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGAGTTCTAGCGAAGCGCTaGCTGCCTCAGAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGVLAKR*LPQSSR
Trigger: GCGGCTGCTCTGAGGCAGGCAGCGCTTCGCTAGAAC...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGAAGCGCCTTTCCTCGCTaGGGCCCGAGCTTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRSAFPR*GPSFLG
Trigger: GCCCAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCT...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GACAGCGGAACCTGGTTCAGGCAGCCGGCGGCGGCGCGGGACGAGCTGAGTGGTGAGGCGTGGAGTGTATaGGGATGTACTAATAGACAC +
Preference number: 4 (lower is better)
Translates to: DSGTWFRQPAAARDELSGEAWSV*GCTNRH
Trigger: GTGTCTATTAGTACATCCCCATACACTCCACGCCTC...ACCACTCAGCTCGTCCCGCGCCGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGAGATTTCAAGGGCGCGTaGGCCTGGCTGTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRDFKGA*AWLSAG
Trigger: CCCAGCCGACAGCCAGGCTCACGCGCCCTTGAAATC...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GGGTGTTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTGGTTCAGGCAGCTGTGAAGGCACATCTTaGGGAGACCGATTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GCFGVPLGKGTAEPGSGSCEGTS*GDRFQP
Trigger: GGGCTGGAATCGGTCTCCCCAAGATGTGCCTTCACA...GCTGCCTGAACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGATCTGGCATCCCCTCATaGGTTAGCGTGCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGSGIPS*VSVRVE
Trigger: CTCCACCCGCACGCTAACCCATGAGGGGATGCCAGA...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTGCGGTAAGCCAAGATTaGACCACTGCACTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GGRALSGIPSWVSVRVETAVSQD*TTALQL
Trigger: AAGCTGGAGTGCAGTGGTGCAATCTTGGCTTACCGC...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGACTCTCAAGCCCTTCCTaGGGGAGAAAGAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGLSSPS*GRKRGA
Trigger: AGCTCCCCTCTTTCTCCCCCAGGAAGGGCTTGAGAG...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTTTAAGCCCATCCTGGTaGGGAGCACTGAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGRALSGIPSWVSVRVETLSPSW*GALSEK
Trigger: CTTCTCACTCAGTGCTCCCCACCAGGATGGGCTTAA...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAACGGCGCGGGACGAGCTaGGTGGTTCTAGCGAAGCGC +
Preference number: 4 (lower is better)
Translates to: KVPALWEKIEPGMRTKGERRGTS*VVLAKR
Trigger: GCGCTTCGCTAGAACCACTCAGCTCGTCCCGCGCCG...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp TTCTCTCCCGCTCAGGAGCGGGAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGAGTCTGCACATTGGCTTaGCATGTTTTCCACCAACAT +
Preference number: 4 (lower is better)
Translates to: FSPAQEREAAGCFGVPLGVCTLA*HVFHQH
Trigger: ATGTTGGTGGAAAACATGTCAAGCCAATGTGCAGAC...TCCTAGCGGGACCCCGAAACACCCGGCGGCTTCCCGCTCCTGAGCGGGAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGAAAATTGAGCCAGGAATaGGGACCAAGGGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGKLSQE*GPRGKG
Trigger: GCCCTTCCCCCTTGGTCCTCATTCCTGGCTCAATTT...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAGAGCTTCCTGGGCTTTaGCCGGGTGCGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: KVPALWEKIEPGMRTKGEELPGL*PGAGRP
Trigger: GGGTCTGCCCGCACCCGGCCAAAGCCCAGGAAGCTC...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp TTCTCTCCCGCTCAGGAGCGGGAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGATTAGGGTCTGCACATTaGCTTGACATGTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: FSPAQEREAAGCFGVPLGLGSAH*LDMFST
Trigger: GGTGGAAAACATGTCAAGCCAATGTGCAGACCCTAA...TCCTAGCGGGACCCCGAAACACCCGGCGGCTTCCCGCTCCTGAGCGGGAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGGGGTTAGCGTGCGGGTaGAGACTGCAGGCCTTACCT +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELGLACG*RLQALP
Trigger: AGGTAAGGCCTGCAGTCTCCACCCGCACGCTAACCC...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGTGGAGTAACGTGACCTaGGTGGAGGGACACCGAGTC +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELWSNVT*VEGHRV
Trigger: GACTCGGTGTCCCTCCACTCAGGTCACGTTACTCCA...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGGGCCGGTCCAGGCTGTaGGGGGCGTTTACAAAAAGT +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELGRSRL*GAFTKS
Trigger: ACTTTTTGTAAACGCCCCGCACAGCCTGGACCGGCC...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGATTCTGCACCGTGAGATaGGAAAGTGAGCAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGFCTVR*ESEQRV
Trigger: CACACGCTGCTCACTTTCGCATCTCACGGTGCAGAA...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTTTGAACTCAGGAGGCTaGAGTAAGCCAAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: GGRALSGIPSWVSVRVETLNSGG*SKPSSC
Trigger: GCATGAACTTGGCTTACTGCAGCCTCCTGAGTTCAA...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GGGTGTTTCGGGGTCCCGCTAGGAAAGGGGACAGCGGAACCTGGTTCAGGCAGCACAGTTGTTGAGGCGTaGAGTGTATGGGGATGTACT +
Preference number: 4 (lower is better)
Translates to: GCFGVPLGKGTAEPGSGSTVVEA*SVWGCT
Trigger: AGTACATCCCCATACACTCCACGCCTCAACAACTGT...GCTGCCTGAACCAGGTTCCGCTGTCCCCTTTCCTAGCGGGACCCCGAAACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGAGGAGCCCAGAGCTCTaGTCTACTGCCTCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELRSPEL*STASQA
Trigger: GGCTTGAGAGGCAGTAGACCAGAGCTCTGGGCTCCT...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGCTCCCTCCCTTCCTCTaGACTTTGTGCCAGCTAGGC +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELLPPFL*TLCQLG
Trigger: GCCTAGCTGGCACAAAGTCCAGAGGAAGGGAGGGAG...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGAAGTGCTGACAGTTGTTaGGGCGTGGAGTGTATGGGG +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRSADSC*GVECMG
Trigger: CCCCATACACTCCACGCCTCAACAACTGTCAGCACT...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGGCCCTGCATTCTGCCTaGTTGACGATGGGGCACATA +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELALHSA*LTMGHI
Trigger: TATGTGCCCCATCGTCAATCAGGCAGAATGCAGGGC...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGATGGGCTTTGGCCGGGTaGGGGCAGACCCCACCGGGG +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERWALAG*GQTPPG
Trigger: CCCCGGTGGGGTCTGCCCGCACCCGGCCAAAGCCCA...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
CDS-3UTR GCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGACTTCTCTGTGGTCTGTaGGGCAGTCCCATCATGAAA +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGLLCGL*GSPIMK
Trigger: TTTCATGATGGGACTGCCGCACAGACCACAGAGAAG...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGAGCCGCGAGGAGGCTTaGAGCGCCTTTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLSREEA*SAFPRW
Trigger: CCAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCT...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGTGTGAAGGCACATCTTaGGGAGACCGATTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELCEGTS*GDRFQP
Trigger: GGGCTGGAATCGGTCTCCCCAAGATGTGCCTTCACA...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGAAGACCTGGTGCTATGTaGGTGTCTGCTGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRRPGAM*VSAAAP
Trigger: AGGTGCAGCAGCAGACACCCACATAGCACCAGGTCT...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGAGGTCCTCACCATGACTaGGAACTAGGGAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRGPHHD*ELGRCP
Trigger: AGGACACCTCCCTAGTTCCCAGTCATGGTGAGGACC...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGATCCCTGAGGTGTGGGTaGAAAGGGCCCTGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: PRTSENQQASRSQACKPGSLRCG*KGPCEG
Trigger: CCCCTCACAGGGCCCTTTGCACCCACACCTCAGGGA...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGGGGGCCCGAGCTTCCTaGGCTTTGGCCGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVGARAS*ALAGCG
Trigger: CCCGCACCCGGCCAAAGCCCAGGAAGCTCGGGCCCC...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAGGGGACAGCGGAACCTaGTTCAGGCAGCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERGDSGT*FRQPAA
Trigger: CGCCGCCGGCTGCCTGAACCAGGTTCCGCTGTCCCC...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
CDS-3UTR TCA 90 bp CAGTTGTTGAGGCGTGGAGTGTATGGGGATGTACTAATAGACACAGTGAAGCTTGATTTCAAGGGCGCGTaGGCCTGGCTGTCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLLRRGVYGDVLIDTVKLDFKGA*AWLSAG
Trigger: CCCAGCCGACAGCCAGGCTCACGCGCCCTTGAAATC...AAGCTTCACTGTGTCTATTAGTACATCCCCATACACTCCACGCCTCAACAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp GTTGTTGAGGCGTGGAGTGTATGGGGATGTACTAATAGACACAGTGAAGCTTCCGGGGCCGGGAGGGAGTaGGTGCTGACAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: VVEAWSVWGCTNRHSEASGAGRE*VLTVVE
Trigger: CTCAACAACTGTCAGCACTCACTCCCTCCCGGCCCC...GGAAGCTTCACTGTGTCTATTAGTACATCCCCATACACTCCACGCCTCAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR TCA 90 bp AGGGAGGTGTCCTTGCCCTTGCCTAAGGTTCAGCACCATGGCCATGCAGCTATAGGCAGGAGAATCACTTaGACTCAGGAGGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: REVSLPLPKVQHHGHAAIGRRIT*TQEAAV
Trigger: TACTGCAGCCTCCTGAGTTCAAGTGATTCTCCTGCC...TATAGCTGCATGGCCATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGGGAGGTGTCCTTGCCCTTGCCTAAGGTTCAGCACCATGGCCATGCAGCTATAGCTGCTGCACCTTGTTaGTCTGAGCAGCAAACTCAG +
Preference number: 4 (lower is better)
Translates to: REVSLPLPKVQHHGHAAIAAAPC*SEQQTQ
Trigger: CTGAGTTTGCTGCTCAGACCAACAAGGTGCAGCAGC...TATAGCTGCATGGCCATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAACATCCCACGGGTCTTTaGAGGGAAGAGGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: KVPALWEKIEPGMRTKGEHPTGL*REEGLT
Trigger: AGTGAGGCCCTCTTCCCTCCAAAGACCCGTGGGATG...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGAGTAATCCCAACACTTTaGGAGGCCAAAATAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGVIPTL*EAKIGR
Trigger: TCTGCCTATTTTGGCCTCCCAAAGTGTTGGGATTAC...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGATGCCGGACAGCCATGTaGAGGCACATCTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PRTSENQQASRSQACKPGCRTAM*RHILGR
Trigger: TCTCCCCAAGATGTGCCTTCACATGGCTGTCCGGCA...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGAGGAGGGAGTGAGTGCTaGCAGTTGTTGAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: PRTSENQQASRSQACKPGGGSEC*QLLRRG
Trigger: TCCACGCCTCAACAACTGTCAGCACTCACTCCCTCC...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGAGACAGGTCCTCACCATaGCTGGGAACTAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PRTSENQQASRSQACKPGDRSSP*LGTREV
Trigger: CACCTCCCTAGTTCCCAGTCATGGTGAGGACCTGTC...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAACCTCATGGGTTAGCGTaGGGGTGGAGACTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKPHGLA*GWRLQA
Trigger: GGCCTGCAGTCTCCACCCGCACGCTAACCCATGAGG...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGACAGACTAATACCCACTaGCTTCAGACCTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRQTNTH*LQTWCY
Trigger: ATAGCACCAGGTCTGAAGCCAGTGGGTATTAGTCTG...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CAA 72 bp TGGGCCATAGATGTCATGAGGGATATCAGAGGAAACTaGTCAGCAGCTCCCACCACCCTAGAATCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: WAIDVMRDIRGN*SAAPTTLESAS
Trigger: AGAGGCGGATTCTAGGGTGGTGGGAGCTGCTGACAAGTTTCCTCTGATATCCCTCATGACATCTATGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
3UTR CAA 72 bp TCCCAGCTACACAGGAGGTTCAGGCAGGAGAATCACTaGAACTCAGGAGGCTGCAGTAAGCCAAGTTCATGC +
Preference number: 4 (lower is better)
Translates to: SQLHRRFRQENH*NSGGCSKPSSC
Trigger: GCATGAACTTGGCTTACTGCAGCCTCCTGAGTTCAAGTGATTCTCCTGCCTGAACCTCCTGTGTAGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAGGGACACCGAGTCCCTaGGGTGTGGGTGCAAAGGGC +
Preference number: 4 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGGTPSP*GVGAKG
Trigger: GCCCTTTGCACCCACACCTCAGGGACTCGGTGTCCC...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGCACCCTATCTTGGCATaGGGAAAATCTCCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELHPILA*GKSPKV
Trigger: TACCTTTGGAGATTTTCCTCATGCCAAGATAGGGTG...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGATGTGTGAGTGGCCTGTaGATGTTAAAGTGTATCTGG +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRCVSGL*MLKCIW
Trigger: CCAGATACACTTTAACATGCACAGGCCACTCACACA...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAAGGTGTCCTTGCCCTTaGCTAAGGTTCAGCACCATG +
Preference number: 4 (lower is better)
Translates to: KVPALWEKIEPGMRTKGERCPCP*LRFSTM
Trigger: CATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCT...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCAGCCTGGCTGTCGGCTaGGCCCCTGAGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: EKDMKEPSEVPEMLHILISLAVG*APEARW
Trigger: CCAGCGAGCCTCAGGGGCCCAGCCGACAGCCAGGCT...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGAAGGCTGAGGCTGAGATaGGAGGATCACTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PRTSENQQASRSQACKPGRLRLR*EDHLSL
Trigger: CAGGCTCAAGTGATCCTCCCATCTCAGCCTCAGCCT...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGTGCACCTTGTTGGTCTaGGCAGCAAACTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLCTLLV*AANSAE
Trigger: CTCTGCTGAGTTTGCTGCTCAGACCAACAAGGTGCA...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGAAAAGAAATAAATGTCTaGCACATGCAACAAGACCAG +
Preference number: 4 (lower is better)
Translates to: AAPTTLESASESIPRVFGKEINV*HMQQDQ
Trigger: CTGGTCTTGTTGCATGTGTCAGACATTTATTTCTTT...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGGCCCATTGGTCCTTCTaGACCGTGAGATGCGAAAGT +
Preference number: 4 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLAHWSF*TVRCES
Trigger: ACTTTCGCATCTCACGGTGCAGAAGGACCAATGGGC...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGTGCTATGTGGGTGTCTaGTGCTGCACCTTGTTGGTC +
Preference number: 4 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLCYVGV*CCTLLV
Trigger: GACCAACAAGGTGCAGCAGCAGACACCCACATAGCA...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGAACTGCCCTGCATTCTaGCTGATTGACGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLNCPAF*LIDDGA
Trigger: TGCCCCATCGTCAATCAGGCAGAATGCAGGGCAGTT...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp ATGTTCCCCAGCAAGCCTGAGGCCTACTGGCAAGGCACTCACTGTTCAGAGCTGTGCTCGGGTGACAAGTaGACCAAAATCTCAGAAATT +
Preference number: 4 (lower is better)
Translates to: MFPSKPEAYWQGTHCSELCSGDK*TKISEI
Trigger: AATTTCTGAGATTTTGGTGCACTTGTCACCCGAGCA...CAGCTCTGAACAGTGAGTGCCTTGCCAGTAGGCCTCAGGCTTGCTGGGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGGGGCCGGGAGGGAGTaGGTGCTGACAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMGAGRE*VLTVVE
Trigger: CTCAACAACTGTCAGCACTCACTCCCTCCCGGCCCC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp GAGCTGAACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAACCTAGAATCCGCCTCTaGGAGCATCCCACGGGTCTT +
Preference number: 4 (lower is better)
Translates to: ELNKMALGHRCHEGYQRKPRIRL*EHPTGL
Trigger: AAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGG...TTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAAGCAAGCCAGCTGCCCTaGATGCAGAGACTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKASQLP*MQRLLC
Trigger: ACAGAGAAGTCTCTGCATTCAGGGCAGCTGGCTTGC...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAGGCTTCTGCCGCTGTTaGAGGATTCCCGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGGFCRC*RIPGPV
Trigger: AACAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCC...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAAAAAAGGCCGACAACTaGCCTGCATTCTGCCTGATT +
Preference number: 4 (lower is better)
Translates to: KVPALWEKIEPGMRTKGEKKADN*PAFCLI
Trigger: AATCAGGCAGAATGCAGGGCAGTTGTCGGCCTTTTT...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGCGTGCGGGTGGAGACTaGAGGCCTTACCTTGCAAGC +
Preference number: 4 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVRAGGD*RPYLAS
Trigger: GCTTGCAAGGTAAGGCCTGCAGTCTCCACCCGCACG...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAACAGTTGTTGAGGCGTaGAGTGTATGGGGATGTACT +
Preference number: 4 (lower is better)
Translates to: KVPALWEKIEPGMRTKGETVVEA*SVWGCT
Trigger: AGTACATCCCCATACACTCCACGCCTCAACAACTGT...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGGGGGCACATACTCCTTaGGACAAAATGGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLGAHTP*DKMVLE
Trigger: CTCCAACACCATTTTGTCCCAAGGAGTATGTGCCCC...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GAGCTGAACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAAGCACTGAGTGAGAAGTaGAGGGCAGAGTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELNKMALGHRCHEGYQRKALSEK*RAESLP
Trigger: GGGCAGAGACTCTGCCCTCCACTTCTCACTCAGTGC...TTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGACTGCAGGCCTTACCTTaGAAGCCAGCTGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERLQALP*KPAALN
Trigger: ATTCAGGGCAGCTGGCTTGCAAGGTAAGGCCTGCAG...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGAGTGGTGGTTACATACTaGATTACATGTCAGAATACA +
Preference number: 4 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRVVVTY*ITCQNT
Trigger: TGTATTCTGACATGTAATGCAGTATGTAACCACCAC...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAATTAGGGTCTGCACATTaGCTTGACATGTTTTCCACC +
Preference number: 4 (lower is better)
Translates to: KVPALWEKIEPGMRTKGELGSAH*LDMFST
Trigger: GGTGGAAAACATGTCAAGCCAATGTGCAGACCCTAA...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCCCCGGCCCTGTTTTCTaGGCCTTCGAATGCCGGACA +
Preference number: 4 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIPGPVF*AFECRT
Trigger: TGTCCGGCATTCGAAGGCTCAGAAAACAGGGCCGGG...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGGTCCTTCTGCACCGTaGGATGCGAAAGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMGPSAP*DAKVSS
Trigger: GCTGCTCACTTTCGCATCTCACGGTGCAGAAGGACC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp GAGCTGAACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAATGCATTCTGCCTGATTaGCGATGGGGCACATACTCC +
Preference number: 4 (lower is better)
Translates to: ELNKMALGHRCHEGYQRKCILPD*RWGTYS
Trigger: GGAGTATGTGCCCCATCGTCAATCAGGCAGAATGCA...TTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGAGTGGGAGCTAAGCTATaGAGATGCAAAGGCATAAGA +
Preference number: 4 (lower is better)
Translates to: PRTSENQQASRSQACKPGVGAKL*RCKGIR
Trigger: TCTTATGCCTTTGCATCTTCATAGCTTAGCTCCCAC...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGGAGGGCAGAGTCTCTaGCCATCAGCGCTTACAGTC +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMGGQSL*PSALTV
Trigger: GACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGATCAGCACCATGGCCATaGAGCTATAATAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: PRTSENQQASRSQACKPGSAPWP*SYNNPK
Trigger: TTTGGGGTTATTATAGCTGCATGGCCATGGTGCTGA...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAAAAGTGAGCAGCGTGTaGAAAGCCTTAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERKVSSV*KALGSA
Trigger: TGCAGACCCTAAGGCTTTTCACACGCTGCTCACTTT...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
CDS-3UTR TCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGAACGTGCTCAGTACCTaGGCTTCTCTGTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVNVLST*ASLWSV
Trigger: CACAGACCACAGAGAAGCTCAGGTACTGAGCACGTT...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGAGTTGGCCTCCACCATaGAAAAGGCCGACAACTGCC +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMSWPPP*KRPTTA
Trigger: GGCAGTTGTCGGCCTTTTTCATGGTGGAGGCCAACT...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp GAGCTGAACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAACTCACTGTTCAGAGCTaGACAAAATGGCTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ELNKMALGHRCHEGYQRKLTVQS*TKWLWA
Trigger: GGCCCAAAGCCATTTTGTTCAGCTCTGAACAGTGAG...TTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGCTAGGGAGGTGTCCTTaGCCTTGCCTAAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMLGRCP*PCLRFS
Trigger: GCTGAACCTTAGGCAAGGGCAAGGACACCTCCCTAG...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGAAACCTGGAGCCCATTaGTCCTTCTGCACCGTGAGA +
Preference number: 4 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVKPGAH*SFCTVR
Trigger: TCTCACGGTGCAGAAGGACCAATGGGCTCCAGGTTT...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAATGAAAACACCCAGGTaGCAGCCCAGTCACCCGAAT +
Preference number: 4 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGMKTPR*QPSHPN
Trigger: ATTCGGGTGACTGGGCTGCCACCTGGGTGTTTTCAT...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGCATTAAGCCCATCCTaGTGGGGAGCACTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMALSPS*WGALSE
Trigger: CTCACTCAGTGCTCCCCACCAGGATGGGCTTAATGC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAATAGTCCCAGCTACTTaGGAGGCTGAGGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGIVPAT*EAEAEM
Trigger: CATCTCAGCCTCAGCCTCCCAAGTAGCTGGGACTAT...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAAGTGTATCTGGAACGTaGTCAGTACCTGAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERSVSGT*SVPELL
Trigger: GAGAAGCTCAGGTACTGAGCACGTTCCAGATACACT...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGCCAGCTGCCCTGAATaGAGAGACTTCTCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMASCPE*RDFSVS
Trigger: GGAAACAGAGAAGTCTCTGCATTCAGGGCAGCTGGC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAATGGAACAAGGCTAAATaGCCATCAACCAATGAGTGG +
Preference number: 4 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKWNKAK*PSTNEW
Trigger: CCACTCATTGGTTGATGGGCATTTAGCCTTGTTCCA...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GAGCTGAACAAAATGGCTTTGGGCCATAGATGTCATGAGGGATATCAGAGGAAACTTACAGTCTGGGTGTaGAGAAAGGCAACAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ELNKMALGHRCHEGYQRKLTVWV*RKATRQ
Trigger: TTGCCTTGTTGCCTTTCTCCACACCCAGACTGTAAG...TTTCCTCTGATATCCCTCATGACATCTATGGCCCAAAGCCATTTTGTTCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGATCTCAGATCCTGAGCTaGCTGTCAATGATCAAACCG +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERSQILS*LSMIKP
Trigger: CGGTTTGATCATTGACAGCCAGCTCAGGATCTGAGA...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAGTCTGCACATTGGCTTaGCATGTTTTCCACCAACAT +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERVCTLA*HVFHQH
Trigger: ATGTTGGTGGAAAACATGTCAAGCCAATGTGCAGAC...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
CDS-3UTR TCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCCGTGAGATGCGAAAGTaGGCAGCGTGTGAAAAGCCT +
Preference number: 4 (lower is better)
Translates to: EKDMKEPSEVPEMLHILIREMRK*AACEKP
Trigger: AGGCTTTTCACACGCTGCTCACTTTCGCATCTCACG...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR GCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCACCTTGCAAGCCAGCTaGCCTGAATGCAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: EKDMKEPSEVPEMLHILITLQAS*PECRDF
Trigger: GAAGTCTCTGCATTCAGGGCAGCTGGCTTGCAAGGT...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAGAGGCGTGGAGTGTATaGGGATGTACTAATAGACAC +
Preference number: 4 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGEAWSV*GCTNRH
Trigger: GTGTCTATTAGTACATCCCCATACACTCCACGCCTC...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGACTCCTTGGGACAAAATaGTGTTGGAGGACTCATACC +
Preference number: 4 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGLLGTK*CWRTHT
Trigger: GGTATGAGTCCTCCAACACCATTTTGTCCCAAGGAG...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAAACACACACCCTATCTTaGCATGAGGAAAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKTHTLS*HEENLQ
Trigger: TTGGAGATTTTCCTCATGCCAAGATAGGGTGTGTGT...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGATCACAGCAACCTGGATaGAGCTGGAGACCATTATAC +
Preference number: 4 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGSQQPG*SWRPLY
Trigger: GTATAATGGTCTCCAGCTCCATCCAGGTTGCTGTGA...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp GAAAAAGATATGAAGGAACCTTCTGAAGTGCCAGAAATGCTCCATATCTTGATCTCAGCGCTTACAGTCTaGGTGTGGAGAAAGGCAACA +
Preference number: 4 (lower is better)
Translates to: EKDMKEPSEVPEMLHILISALTV*VWRKAT
Trigger: TGTTGCCTTTCTCCACACCCAGACTGTAAGCGCTGA...GATCAAGATATGGAGCATTTCTGGCACTTCAGAAGGTTCCTTCATATCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGAAAGTGCCCGCTTTGTaGGAGAAAATTGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMKVPAL*EKIEPG
Trigger: TCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGAAACATGTGCAAAATCTaGATTAGTACGTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: PPTCAKSELVRVAGECERNMCKI*ISTCSW
Trigger: CCAGCTACACGTACTAATTCAGATTTTGCACATGTT...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
CDS-3UTR CCA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAATATAATAACCCCAAATaGCAAAGAACTCTCAGATCC +
Preference number: 4 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKYNNPK*QRTLRS
Trigger: GGATCTGAGAGTTCTTTGCCATTTGGGGTTATTATA...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGAACTGCCTTCCTCCATaGCAGTTGCCTATCATCTTT +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMNCLPP*QLPIIF
Trigger: AAAGATGATAGGCAACTGCCATGGAGGAAGGCAGTT...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGAACATGTGCAAAATCTaGATTAGTACGTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMNMCKI*ISTCSW
Trigger: CCAGCTACACGTACTAATTCAGATTTTGCACATGTT...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGTCCCAAGCACATATGTaGGTAACTGACTTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMSQAHM*VTDFAN
Trigger: ATTAGCAAAGTCAGTTACTCACATATGTGCTTGGGA...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR TCA 90 bp ACATGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGATTGGAAAAAGATATaGAGGAACCTTCTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: TCYMLHLYEAQGRQRLFMDWKKI*RNLLKC
Trigger: GCACTTCAGAAGGTTCCTTCATATCTTTTTCCAATC...CATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CCA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGATGTCCCTCAACATATaGATGGATAAGCAAATACTA +
Preference number: 4 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVMSLNI*MDKQIL
Trigger: TAGTATTTGCTTATCCATCCATATGTTGAGGGACAT...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS GCA 90 bp GCTGGGCCGCCGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTaGAGGATTCCCGGCCCTGGGGAGAAAAGCGTCTGTATCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AGPPEARGAGGFCRC*RIPGPGEKSVCIRA
Trigger: GGCTCTGATACAGACGCTTTTCTCCCCAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCGGCGGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 90 bp GGGGATTCTGAAAGCCGCGAGGAGGCTTGGAGCGCCTTTCCTCGCTaGGGCCCGAGCTTCCTGGGCTTTGGCCGGGTGCGGGCAGACCCC +
Preference number: 5 (lower is better)
Translates to: GDSESREEAWSAFPR*GPSFLGFGRVRADP
Trigger: GGGGTCTGCCCGCACCCGGCCAAAGCCCAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCTTTCAGAATCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp TTCTCTCCCGCTCAGGAGCGGGAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGACGAGCTTCCTGGGCTTaGGCCGGGTGCGGGCAGACC +
Preference number: 5 (lower is better)
Translates to: FSPAQEREAAGCFGVPLGRASWA*AGCGQT
Trigger: GGTCTGCCCGCACCCGGCCAAAGCCCAGGAAGCTCG...TCCTAGCGGGACCCCGAAACACCCGGCGGCTTCCCGCTCCTGAGCGGGAGAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS CCA 90 bp TGTTCCTCTGAAAGCCGCGAGGAGGCTTGGAGCGCCTTTCCTCGCTaGGGCCCGAGCTTCCTGGGCTTTGGCCGGGTGCGGGCAGACCCC +
Preference number: 5 (lower is better)
Translates to: CSSESREEAWSAFPR*GPSFLGFGRVRADP
Trigger: GGGGTCTGCCCGCACCCGGCCAAAGCCCAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCTTTCAGAGGAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS TCA 90 bp GGCGGCGCTACGGTGGGACCACGGTCAGGAGGCGCCGGTGGCTGCTaGATTGCAGCTGCGGGACCCTGGAAAACTGGGGCAAAGAGGCAG +
Preference number: 5 (lower is better)
Translates to: GGATVGPRSGGAGGC*IAAAGPWKTGAKRQ
Trigger: CTGCCTCTTTGCCCCAGTTTTCCAGGGTCCCGCAGCTGCAATTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCCACCGTAGCGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS-3UTR CAA 90 bp TTCTCTCCCGCTCAGGAGCGGGAAGCCGCCGGGTGTTTCGGGGTCCCGCTAGGAAAGCCGCGAGGAGGCTaGGAGCGCCTTTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: FSPAQEREAAGCFGVPLGKPRGG*ERLSSL
Trigger: CAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCTT...TCCTAGCGGGACCCCGAAACACCCGGCGGCTTCCCGCTCCTGAGCGGGAGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS CCA 90 bp ATCCGCAGGCGGCGCTACGGTGGGACCACGGTCAGGAGGCGCCGGTaGCTGCTGAATTGCAGCTGCGGGACCCTGGAAAACTGGGGCAAA +
Preference number: 5 (lower is better)
Translates to: IRRRRYGGTTVRRRR*LLNCSCGTLENWGK
Trigger: TTTGCCCCAGTTTTCCAGGGTCCCGCAGCTGCAATTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCCACCGTAGCGCCGCCTGCGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 90 bp AGGGCGCCCCGCACCGTTTCCTGGAGCGCCCGGTTCACCCACCTCTaGCTGGGCCGGCAAGGAGAGGATTCTGTTCTCTCCCTAGATTCC +
Preference number: 5 (lower is better)
Translates to: RAPRTVSWSARFTHL*LGRQGEDSVLSLDS
Trigger: GGAATCTAGGGAGAGAACAGAATCCTCTCCTTGCCGGCCCAGCCAGAGGTGGGTGAACCGGGCGCTCCAGGAAACGGTGCGGGGCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 90 bp AGGCGCCGGTGGCTGCTGAATTGCAGCTGCGGGACCCTGGAAAACTaGGGCAAAGAGGCAGTGAGTTCTGCCCAGCCCACCACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: RRRWLLNCSCGTLEN*GKEAVSSAQPTTLA
Trigger: GGCCAGGGTGGTGGGCTGGGCAGAACTCACTGCCTCTTTGCCCCAGTTTTCCAGGGTCCCGCAGCTGCAATTCAGCAGCCACCGGCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 90 bp TCAATCGGCGGTTCACTGGAACCGTATCCGCAGGCGGCGCTACGGTaGGACCACGGTCAGGAGGCGCCGGTGGCTGCTGAATTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SIGGSLEPYPQAALR*DHGQEAPVAAELQL
Trigger: CAGCTGCAATTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCCACCGTAGCGCCGCCTGCGGATACGGTTCCAGTGAACCGCCGATTGA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 90 bp CCGAGGCGCGGGCGGCTTCTGCCGCTGTTGCAGGATTCCCGGCCCTaGGGAGAAAAGCGTCTGTATCAGAGCCGTGTAGATTGCTCGCGC +
Preference number: 5 (lower is better)
Translates to: PRRGRLLPLLQDSRP*GEKRLYQSRVDCSR
Trigger: GCGCGAGCAATCTACACGGCTCTGATACAGACGCTTTTCTCCCCAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS GCA 90 bp CGCTACGGTGGGACCACGGTCAGGAGGCGCCGGTGGCTGCTGAATTaGAGCTGCGGGACCCTGGAAAACTGGGGCAAAGAGGCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: RYGGTTVRRRRWLLN*SCGTLENWGKEAVS
Trigger: ACTCACTGCCTCTTTGCCCCAGTTTTCCAGGGTCCCGCAGCTGCAATTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCCACCGTAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS TCA 90 bp AGAGAGGATCCCGACCTCGCCAGCAACCAGCCTACCTCCGAAGGTTaGGAAGTAAATCAGGGCGCCCCGCACCGTTTCCTGGAGCGCCCG +
Preference number: 5 (lower is better)
Translates to: REDPDLASNQPTSEG*EVNQGAPHRFLERP
Trigger: CGGGCGCTCCAGGAAACGGTGCGGGGCGCCCTGATTTACTTCTCAACCTTCGGAGGTAGGCTGGTTGCTGGCGAGGTCGGGATCCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS-3UTR CAA 90 bp AGAAGTGGAGGGCAGAGTCTCTGCCCATCAGCGCTTACAGTCTGGGTGTGGAGACGGCTTCTGCCGCTGTaGCAGGATTCCCGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RSGGQSLCPSALTVWVWRRLLPL*QDSRPC
Trigger: ACAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCG...TCTCCACACCCAGACTGTAAGCGCTGATGGGCAGAGACTCTGCCCTCCACTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp GCGAAGCGCTGCCTGCCTCAGAGCAGCCGCGACGCTTCCCTAGTAGAGCTGGGCAGAACTAGAGGGGATTaGGAGTTGACAGAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: AKRCLPQSSRDASLVELGRTRGD*ELTEGE
Trigger: TTCTCCCTCTGTCAACTCCAAATCCCCTCTAGTTCT...GCCCAGCTCTACTAGGGAAGCGTCGCGGCTGCTCTGAGGCAGGCAGCGCTTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS GCA 90 bp GAGAAAAGGAACCGGCCCTGGCGTCCACAAAACCTAGGCACAGTATaGCCTGTTCAGAGAGGATCCCGACCTCGCCAGCAACCAGCCTAC +
Preference number: 5 (lower is better)
Translates to: EKRNRPWRPQNLGTV*PVQRGSRPRQQPAY
Trigger: GTAGGCTGGTTGCTGGCGAGGTCGGGATCCTCTCTGAACAGGGCATACTGTGCCTAGGTTTTGTGGACGCCAGGGCCGGTTCCTTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS-3UTR CAA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGACGAGCTTCCTGGGCTTaGGCCGGGTGCGGGCAGACC +
Preference number: 5 (lower is better)
Translates to: PRTSENQQASRSQACKPGRASWA*AGCGQT
Trigger: GGTCTGCCCGCACCCGGCCAAAGCCCAGGAAGCTCG...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp GGGGGAAGGGCTCTCTCTGGCATCCCCTCATGGGTTAGCGTGCGGGTGGAGACTTGGGGCACATACTCCTaGGGACAAAATGGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: GGRALSGIPSWVSVRVETWGTYS*GQNGVG
Trigger: TCCAACACCATTTTGTCCCAAGGAGTATGTGCCCCA...AGTCTCCACCCGCACGCTAACCCATGAGGGGATGCCAGAGAGAGCCCTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp AGGGAGGTGTCCTTGCCCTTGCCTAAGGTTCAGCACCATGGCCATGCAGCTATAGCATCCCACGGGTCTTaGGAGGGAAGAGGGCCTCAC +
Preference number: 5 (lower is better)
Translates to: REVSLPLPKVQHHGHAAIASHGS*EGRGPH
Trigger: GTGAGGCCCTCTTCCCTCCAAAGACCCGTGGGATGC...TATAGCTGCATGGCCATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp GCAGAGGCCATCCCTCCAAGCAGAGGGTTGCAGCAAGCTCTATTCTCTCCCGCTCCTCCAAGCAGAGGGTaGCAGCAAGCTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: AEAIPPSRGLQQALFSPAPPSRG*QQALFS
Trigger: AGAGAATAGAGCTTGCTGCAACCCTCTGCTTGGAGG...AGCGGGAGAGAATAGAGCTTGCTGCAACCCTCTGCTTGGAGGGATGGCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS-3UTR CAA 90 bp GCAGCTCCCACCACCCTAGAATCCGCCTCTGAGAGCATCCCACGGGTCTTTGGACAACACTTTGGGAAGTaGAAGCAGGCAAATCACCCT +
Preference number: 5 (lower is better)
Translates to: AAPTTLESASESIPRVFGQHFGK*KQANHP
Trigger: AGGGTGATTTGCCTGCTTCAACTTCCCAAAGTGTTG...TCCAAAGACCCGTGGGATGCTCTCAGAGGCGGATTCTAGGGTGGTGGGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAAAAGCCGCGAGGAGGCTaGGAGCGCCTTTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKKPRGG*ERLSSL
Trigger: CAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCTT...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS GCA 90 bp GACCTGAAAGTAATCATTCTGCCAGCTTTCCCGCCCGCATTTTCTTaGCTGTTTTCTGAGCCTTCGAATGCCGGACAGCCATGTGAAGGC +
Preference number: 5 (lower is better)
Translates to: DLKVIILPAFPPAFS*LFSEPSNAGQPCEG
Trigger: GCCTTCACATGGCTGTCCGGCATTCGAAGGCTCAGAAAACAGGCAAGAAAATGCGGGCGGGAAAGCTGGCAGAATGATTACTTTCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS-3UTR CAA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAGATATCAGAGGAAACTaGTCAGCAGCTCCCACCACC +
Preference number: 5 (lower is better)
Translates to: KVPALWEKIEPGMRTKGEDIRGN*SAAPTT
Trigger: GGTGGTGGGAGCTGCTGACAAGTTTCCTCTGATATC...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGAGAGGTGTCCTTGCCCTaGCCTAAGGTTCAGCACCAT +
Preference number: 5 (lower is better)
Translates to: PRTSENQQASRSQACKPGEVSLP*PKVQHH
Trigger: ATGGTGCTGAACCTTAGGCAAGGGCAAGGACACCTC...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGACTAGGGAGGTGTCCTaGCCCTTGCCTAAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLTREVS*PLPKVQ
Trigger: CTGAACCTTAGGCAAGGGCAAGGACACCTCCCTAGT...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp GCATTCTGCCTGATTGACGATGGGGCACATACTCCTTGGGACAAAATGGTGTTGAGGCAGGAGAATCACTaGAACTCAGGAGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: AFCLIDDGAHTPWDKMVLRQENH*NSGGCS
Trigger: ACTGCAGCCTCCTGAGTTCAAGTGATTCTCCTGCCT...CAACACCATTTTGTCCCAAGGAGTATGTGCCCCATCGTCAATCAGGCAGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp AAAGTGCCCGCTTTGTGGGAGAAAATTGAGCCAGGAATGAGGACCAAGGGGGAAAGAACTAGAGGGGATTaGGAGTTGACAGAGGGAGAA +
Preference number: 5 (lower is better)
Translates to: KVPALWEKIEPGMRTKGERTRGD*ELTEGE
Trigger: TTCTCCCTCTGTCAACTCCAAATCCCCTCTAGTTCT...TTCCCCCTTGGTCCTCATTCCTGGCTCAATTTTCTCCCACAAAGCGGGCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAACCTCCAAGCAGAGGGTaGCAGCAAGCTCTATTCTCT +
Preference number: 5 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKPPSRG*QQALFS
Trigger: AGAGAATAGAGCTTGCTGCAACCCTCTGCTTGGAGG...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGAACTGCAGGCCTTACCTaGCAAGCCAGCTGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGTAGLT*QASCPE
Trigger: TTCAGGGCAGCTGGCTTGCAAGGTAAGGCCTGCAGT...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp CCAAGGACATCAGAGAATCAACAGGCTTCTCGGAGTCAGGCTTGTAAACCTGGATGTAATCCCAACACTTaGGGAGGCCAAAATAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRTSENQQASRSQACKPGCNPNT*GGQNRQ
Trigger: CTGCCTATTTTGGCCTCCCAAAGTGTTGGGATTACA...TCCAGGTTTACAAGCCTGACTCCGAGAAGCCTGTTGATTCTCTGATGTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp AAAAGATTACACACTGGGTACCGTGTACAATGCTCGGGTGACAAGTGCACCAAACTGCCTTTTTCCCAGTaGGCCTCCACCATGAAAAAG +
Preference number: 5 (lower is better)
Translates to: KRLHTGYRVQCSGDKCTKLPFSQ*ASTMKK
Trigger: CTTTTTCATGGTGGAGGCCAACTGGGAAAAAGGCAG...TTTGGTGCACTTGTCACCCGAGCATTGTACACGGTACCCAGTGTGTAATCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp CCACCAACATGTGCAAAATCTGAATTAGTACGTGTAGCTGGTGAGTGTGAGAGATGGGACAAAATGGTGTaGGAGGACTCATACCCCAAC +
Preference number: 5 (lower is better)
Translates to: PPTCAKSELVRVAGECERWDKMV*EDSYPN
Trigger: GTTGGGGTATGAGTCCTCCAACACCATTTTGTCCCA...TCTCTCACACTCACCAGCTACACGTACTAATTCAGATTTTGCACATGTTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGGGTCTGCACATTGGCTaGACATGTTTTCCACCAACA +
Preference number: 5 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVGLHIG*TCFPPT
Trigger: TGTTGGTGGAAAACATGTCAAGCCAATGTGCAGACC...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp TGCTATATGCTCCATTTATACGAGGCTCAAGGCAGGCAAAGGTTATTTATGGTGCTGAACAAAATGGCTTaGGGCCATAGATGTCATGAG +
Preference number: 5 (lower is better)
Translates to: CYMLHLYEAQGRQRLFMVLNKMA*GHRCHE
Trigger: CTCATGACATCTATGGCCCAAAGCCATTTTGTTCAG...CACCATAAATAACCTTTGCCTGCCTTGAGCCTCGTATAAATGGAGCATATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS-3UTR CAA 90 bp AGCCATAAAAAGGAACAAAATAATGGCATTCACAGCAACCTGGATGGAGCTGGACCAGTAAAGTCTAGTTaGAATGTTTCAGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: SHKKEQNNGIHSNLDGAGPVKSS*NVSDRS
Trigger: GGACCTGTCTGAAACATTCAAACTAGACTTTACTGG...TCCAGCTCCATCCAGGTTGCTGTGAATGCCATTATTTTGTTCCTTTTTATGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS CCA 72 bp CTTGGAGCGCCTTTCCTCGCTGGGGCCCGAGCTTCCTaGGCTTTGGCCGGGTGCGGGCAGACCCCACCGGGG +
Preference number: 6 (lower is better)
Translates to: LGAPFLAGARAS*ALAGCGQTPPG
Trigger: CCCCGGTGGGGTCTGCCCGCACCCGGCCAAAGCCCAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCTCCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
CDS TCA 72 bp GAGGCGCGGGGCCAGGCTGCGAGGAGGCGCGGGAGCTaGGACTGCGCTCAATCGGCGGTTCACTGGAACCGT +
Preference number: 6 (lower is better)
Translates to: EARGQAARRRGS*DCAQSAVHWNR
Trigger: ACGGTTCCAGTGAACCGCCGATTGAGCGCAGTCTCAGCTCCCGCGCCTCCTCGCAGCCTGGCCCCGCGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 72 bp GAAAGCCGCGAGGAGGCTTGGAGCGCCTTTCCTCGCTaGGGCCCGAGCTTCCTGGGCTTTGGCCGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: ESREEAWSAFPR*GPSFLGFGRVR
Trigger: CCGCACCCGGCCAAAGCCCAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCTTTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383165.4
ENST00000470680.5
CDS GCA 72 bp CCGGAAGCCCGAGGCGCGGGCGGCTTCTGCCGCTGTTaGAGGATTCCCGGCCCTGGGGAGAAAAGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: PEARGAGGFCRC*RIPGPGEKSVC
Trigger: ACAGACGCTTTTCTCCCCAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCCGCGCCTCGGGCTTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 72 bp GGTTCACTGGAACCGTATCCGCAGGCGGCGCTACGGTaGGACCACGGTCAGGAGGCGCCGGTGGCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: GSLEPYPQAALR*DHGQEAPVAAE
Trigger: TTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCCACCGTAGCGCCGCCTGCGGATACGGTTCCAGTGAACC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS TCA 72 bp ACGGTGGGACCACGGTCAGGAGGCGCCGGTGGCTGCTaGATTGCAGCTGCGGGACCCTGGAAAACTGGGGCA +
Preference number: 6 (lower is better)
Translates to: TVGPRSGGAGGC*IAAAGPWKTGA
Trigger: TGCCCCAGTTTTCCAGGGTCCCGCAGCTGCAATTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCCACCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 72 bp ACCAGGGCTGGGGATTCTGAAAGCCGCGAGGAGGCTTaGAGCGCCTTTCCTCGCTGGGGCCCGAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: TRAGDSESREEA*SAFPRWGPSFL
Trigger: CAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCTTTCAGAATCCCCAGCCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383165.4
CDS CAA 90 bp GCGCTACGGTGGGACCACGGTCAGGAGGCGCCGGTGGCTGCTGAATaGCAGCTGCGGGACCCTGGAAAACTGGGGCAAAGAGGCAGTGAG +
Preference number: 6 (lower is better)
Translates to: ALRWDHGQEAPVAAE*QLRDPGKLGQRGSE
Trigger: CTCACTGCCTCTTTGCCCCAGTTTTCCAGGGTCCCGCAGCTGCAATTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCCACCGTAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS GCA 72 bp GGGACCACGGTCAGGAGGCGCCGGTGGCTGCTGAATTaGAGCTGCGGGACCCTGGAAAACTGGGGCAAAGAG +
Preference number: 6 (lower is better)
Translates to: GTTVRRRRWLLN*SCGTLENWGKE
Trigger: CTCTTTGCCCCAGTTTTCCAGGGTCCCGCAGCTGCAATTCAGCAGCCACCGGCGCCTCCTGACCGTGGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS GCA 72 bp TGGGGAGAAAAGCGTCTGTATCAGAGCCGTGTAGATTaGTCGCGCCGGCTGTCGGGACCTCCGAGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: WGEKRLYQSRVD*SRRLSGPPRRG
Trigger: CCCGCGCCTCGGAGGTCCCGACAGCCGGCGCGAGCAATCTACACGGCTCTGATACAGACGCTTTTCTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 72 bp CGCACCGTTTCCTGGAGCGCCCGGTTCACCCACCTCTaGCTGGGCCGGCAAGGAGAGGATTCTGTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: RTVSWSARFTHL*LGRQGEDSVLS
Trigger: GGAGAGAACAGAATCCTCTCCTTGCCGGCCCAGCCAGAGGTGGGTGAACCGGGCGCTCCAGGAAACGGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CAA 72 bp CTGGGGAGAAAAGCGTCTGTATCAGAGCCGTGTAGATaGCTCGCGCCGGCTGTCGGGACCTCCGAGGCGCGG +
Preference number: 6 (lower is better)
Translates to: LGRKASVSEPCR*LAPAVGTSEAR
Trigger: CCGCGCCTCGGAGGTCCCGACAGCCGGCGCGAGCAATCTACACGGCTCTGATACAGACGCTTTTCTCCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 72 bp TGGGGATTCTGTTCCTCTGAAAGCCGCGAGGAGGCTTaGAGCGCCTTTCCTCGCTGGGGCCCGAGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: WGFCSSESREEA*SAFPRWGPSFL
Trigger: CAGGAAGCTCGGGCCCCAGCGAGGAAAGGCGCTCCAAGCCTCCTCGCGGCTTTCAGAGGAACAGAATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470680.5
CDS CAA 90 bp CAGAGAGGATCCCGACCTCGCCAGCAACCAGCCTACCTCCGAAGGTaGAGAAGTAAATCAGGGCGCCCCGCACCGTTTCCTGGAGCGCCC +
Preference number: 6 (lower is better)
Translates to: QRGSRPRQQPAYLRR*RSKSGRPAPFPGAP
Trigger: GGGCGCTCCAGGAAACGGTGCGGGGCGCCCTGATTTACTTCTCAACCTTCGGAGGTAGGCTGGTTGCTGGCGAGGTCGGGATCCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS TCA 72 bp CCCGACCTCGCCAGCAACCAGCCTACCTCCGAAGGTTaGGAAGTAAATCAGGGCGCCCCGCACCGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: PDLASNQPTSEG*EVNQGAPHRFL
Trigger: CAGGAAACGGTGCGGGGCGCCCTGATTTACTTCTCAACCTTCGGAGGTAGGCTGGTTGCTGGCGAGGTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 72 bp GGGCGGCTTCTGCCGCTGTTGCAGGATTCCCGGCCCTaGGGAGAAAAGCGTCTGTATCAGAGCCGTGTAGAT +
Preference number: 6 (lower is better)
Translates to: GRLLPLLQDSRP*GEKRLYQSRVD
Trigger: ATCTACACGGCTCTGATACAGACGCTTTTCTCCCCAGGGCCGGGAATCCTGCAACAGCGGCAGAAGCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS GCA 72 bp AACCGGCCCTGGCGTCCACAAAACCTAGGCACAGTATaGCCTGTTCAGAGAGGATCCCGACCTCGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: NRPWRPQNLGTV*PVQRGSRPRQQ
Trigger: TTGCTGGCGAGGTCGGGATCCTCTCTGAACAGGGCATACTGTGCCTAGGTTTTGTGGACGCCAGGGCCGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS GCA 72 bp GTAATCATTCTGCCAGCTTTCCCGCCCGCATTTTCTTaGCTGTTTTCTGAGCCTTCGAATGCCGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: VIILPAFPPAFS*LFSEPSNAGQP
Trigger: TGGCTGTCCGGCATTCGAAGGCTCAGAAAACAGGCAAGAAAATGCGGGCGGGAAAGCTGGCAGAATGATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498709.1
CDS CCA 72 bp CTGTTCCTCTGTGTTTCTGAGCAGCACACATGCACCTaGTATCTCACCCATCTCAAGGACAGCTCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: LFLCVSEQHTCT*YLTHLKDSSSP
Trigger: TGGAGAGGAGCTGTCCTTGAGATGGGTGAGATACCAGGTGCATGTGTGCTGCTCAGAAACACAGAGGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498709.1