RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for FOXL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000176678

Ensembl transcript IDs: ENST00000320241.5, ENST00000593625.1

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCAACTGCACCTGTAAGGCCTGCCTTGGGTGGTCTGCGGGCCCTTaGATGCCCGGGACTCGCAGGACCTGCGGTGGGCGGCTGAAGACC +
Preference number: 1 (lower is better)
Translates to: LNCTCKACLGWSAGP*MPGTRRTCGGRLKT
Trigger: GGTCTTCAGCCGCCCACCGCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 90 bp ACGGGGGTCCCCGGTCGAAAGGACCTCAACTGCACCTGTAAGGCCTaGCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGG +
Preference number: 1 (lower is better)
Translates to: TGVPGRKDLNCTCKA*LGWSAGPCMPGTRR
Trigger: CCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCGACCGGGGACCCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp CCCGGTCGAAAGGACCTCAACTGCACCTGTAAGGCCTGCCTTGGGTaGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCGGT +
Preference number: 1 (lower is better)
Translates to: PGRKDLNCTCKACLG*SAGPCMPGTRRTCG
Trigger: ACCGCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCGACCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 90 bp GCAGGCGACGGTCATACGGGGGTCCCCGGTCGAAAGGACCTCAACTaGACCTGTAAGGCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATG +
Preference number: 1 (lower is better)
Translates to: AGDGHTGVPGRKDLN*TCKACLGWSAGPCM
Trigger: CATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCGACCGGGGACCCCCGTATGACCGTCGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp CCAGCTGTGACCACCCACCACCCAGATGGGCTCAAAACCAAGGCCTaGGCCACACGGCAACAGCGAAGCAGGCGACGGTCATACGGGGGT +
Preference number: 1 (lower is better)
Translates to: PAVTTHHPDGLKTKA*ATRQQRSRRRSYGG
Trigger: ACCCCCGTATGACCGTCGCCTGCTTCGCTGTTGCCGTGTGGCTCAGGCCTTGGTTTTGAGCCCATCTGGGTGGTGGGTGGTCACAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp CCACAGGCCGACCCAGGCAAAGATCATTTTAAAATCCTCCGCCGGTaGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGG +
Preference number: 1 (lower is better)
Translates to: PQADPGKDHFKILRR*ELWPFAQRRLRLGR
Trigger: CCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAAATGATCTTTGCCTGGGTCGGCCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp GTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCGGTaGGCGGCTGAAGACCACACTCCATTAGACAGGTCAAACGTCAAG +
Preference number: 1 (lower is better)
Translates to: VVCGPLHARDSQDLR*AAEDHTPLDRSNVK
Trigger: CTTGACGTTTGACCTGTCTAATGGAGTGTGGTCTTCAGCCGCCCACCGCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp CGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCGGTGGGCGGCTaGAGACCACACTCCATTAGACAGGTCAAACGTCAAGGAATCTCC +
Preference number: 1 (lower is better)
Translates to: RALACPGLAGPAVGG*RPHSIRQVKRQGIS
Trigger: GGAGATTCCTTGACGTTTGACCTGTCTAATGGAGTGTGGTCTTCAGCCGCCCACCGCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp GACCCAGGCAAAGATCATTTTAAAATCCTCCGCCGGTGGGAGCTGTaGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGAAGAAC +
Preference number: 1 (lower is better)
Translates to: DPGKDHFKILRRWEL*PFAQRRLRLGREKN
Trigger: GTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAAATGATCTTTGCCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp ACCCCCGGCACCTCCACAACTTCAAGTCAGGAACAAACCCAGCTGTaGCCACCCACCACCCAGATGGGCTCAAAACCAAGGCCTGAGCCA +
Preference number: 1 (lower is better)
Translates to: TPGTSTTSSQEQTQL*PPTTQMGSKPRPEP
Trigger: TGGCTCAGGCCTTGGTTTTGAGCCCATCTGGGTGGTGGGTGGTCACAGCTGGGTTTGTTCCTGACTTGAAGTTGTGGAGGTGCCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp CAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTAACACTTCCCTaGACCCACAGGCCGACCCAGGCAAAGATCATTTTAAAATCCTCC +
Preference number: 1 (lower is better)
Translates to: QASAPTCAQWLVTLP*THRPTQAKIILKSS
Trigger: GGAGGATTTTAAAATGATCTTTGCCTGGGTCGGCCTGTGGGTTCAGGGAAGTGTTACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 90 bp GATCTTTTAAGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTaGTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGT +
Preference number: 1 (lower is better)
Translates to: DLLSLRSCSQLLGKV*FGEGRRARPPARNG
Trigger: ACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACTTAAAAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp CTTCAAGTCAGGAACAAACCCAGCTGTGACCACCCACCACCCAGATaGGCTCAAAACCAAGGCCTGAGCCACACGGCAACAGCGAAGCAG +
Preference number: 1 (lower is better)
Translates to: LQVRNKPSCDHPPPR*AQNQGLSHTATAKQ
Trigger: CTGCTTCGCTGTTGCCGTGTGGCTCAGGCCTTGGTTTTGAGCCCATCTGGGTGGTGGGTGGTCACAGCTGGGTTTGTTCCTGACTTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp TGGATCTCAGCAATGGCTCCTCCTGGAAGTTCTTCCAATCAAGGCTaGCCTGAAGTTTCCCAGAGTCTTCCCACTGGCCTGGGTAGAACC +
Preference number: 1 (lower is better)
Translates to: WISAMAPPGSSSNQG*PEVSQSLPTGLGRT
Trigger: GGTTCTACCCAGGCCAGTGGGAAGACTCTGGGAAACTTCAGGCCAGCCTTGATTGGAAGAACTTCCAGGAGGAGCCATTGCTGAGATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp AAACCGATTCAATACGGCAGAATTAACTCATCGTGCTTTCTGATATaGAGGCAGCTTCCTGGGCCCGGCATCCTCTCCACTCCTTCCCCT +
Preference number: 1 (lower is better)
Translates to: KPIQYGRINSSCFLI*RQLPGPGILSTPSP
Trigger: AGGGGAAGGAGTGGAGAGGATGCCGGGCCCAGGAAGCTGCCTCCATATCAGAAAGCACGATGAGTTAATTCTGCCGTATTGAATCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp CTTCCCCTCCATCTGTGTGTTTACCCCTCAGAAGCCAGAGCCTCCTaGGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTT +
Preference number: 1 (lower is better)
Translates to: LPLHLCVYPSEARAS*DANTTPRYNPSLLF
Trigger: AAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGGAGGCTCTGGCTTCTGAGGGGTAAACACACAGATGGAGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp GGAGGCCCAGGAGGCCGTTTGTTTCTAGAAAAGCCAGCAACTAGATaGGGCCAGGCAGAGCAAGAGTCCTTTGTAAAGTTCTCTGTCCTT +
Preference number: 1 (lower is better)
Translates to: GGPGGRLFLEKPATR*GQAEQESFVKFSVL
Trigger: AAGGACAGAGAACTTTACAAAGGACTCTTGCTCTGCCTGGCCTCATCTAGTTGCTGGCTTTTCTAGAAACAAACGGCCTCCTGGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp GGGATAGCAAAATATCCAGTGACAGCCCTTTCGCTACATTTTCAGTaGATCACAGTGAGCCTGGATCTCAGCAATGGCTCCTCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: GIAKYPVTALSLHFQ*ITVSLDLSNGSSWK
Trigger: CTTCCAGGAGGAGCCATTGCTGAGATCCAGGCTCACTGTGATTCACTGAAAATGTAGCGAAAGGGCTGTCACTGGATATTTTGCTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp ATTAAAAACCGATTCAATACGGCAGAATTAACTCATCGTGCTTTCTaGTATGGAGGCAGCTTCCTGGGCCCGGCATCCTCTCCACTCCTT +
Preference number: 1 (lower is better)
Translates to: IKNRFNTAELTHRAF*YGGSFLGPASSPLL
Trigger: AAGGAGTGGAGAGGATGCCGGGCCCAGGAAGCTGCCTCCATATCAGAAAGCACGATGAGTTAATTCTGCCGTATTGAATCGGTTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 90 bp TTCGCTACATTTTCAGTGAATCACAGTGAGCCTGGATCTCAGCAATaGCTCCTCCTGGAAGTTCTTCCAATCAAGGCTGGCCTGAAGTTT +
Preference number: 1 (lower is better)
Translates to: FATFSVNHSEPGSQQ*LLLEVLPIKAGLKF
Trigger: AAACTTCAGGCCAGCCTTGATTGGAAGAACTTCCAGGAGGAGCCATTGCTGAGATCCAGGCTCACTGTGATTCACTGAAAATGTAGCGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp AAAGTCACCTCTATGCCTGTGAATTATCCAATTACTCTGCCGGCCTaGAATGTCCTTTCCAACACATTGACCAACAGGCCCTCTGGATTC +
Preference number: 1 (lower is better)
Translates to: KVTSMPVNYPITLPA*NVLSNTLTNRPSGF
Trigger: GAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGGACATTTCAGGCCGGCAGAGTAATTGGATAATTCACAGGCATAGAGGTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp AAAATAAAAGTGTTATTGCTCTGGGTGGTTATCAGCTTCTATAGCTaGACATTGGTCATAAATCCTCATCGGGCCCTACATCTCTCAGAA +
Preference number: 1 (lower is better)
Translates to: KIKVLLLWVVISFYS*TLVINPHRALHLSE
Trigger: TTCTGAGAGATGTAGGGCCCGATGAGGATTTATGACCAATGTTCAGCTATAGAAGCTGATAACCACCCAGAGCAATAACACTTTTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp CATATGTGTGTGGGTATTTGTTTGTGTGTGTGTGTAATCAGGGCTTaGACCAAAGATCATTTACAGAAGACAGATCTGTTCCCTTTGTTT +
Preference number: 1 (lower is better)
Translates to: HMCVGICLCVCVIRA*TKDHLQKTDLFPLF
Trigger: AAACAAAGGGAACAGATCTGTCTTCTGTAAATGATCTTTGGTTCAAGCCCTGATTACACACACACACAAACAAATACCCACACACATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 90 bp TATACACACTTTGTTATCAAACATGTGCCTGCCATATCCTCATTATaGTCAGTGCACTCATATGTGTGTGGGTATTTGTTTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: YTHFVIKHVPAISSL*SVHSYVCGYLFVCV
Trigger: CACACACACAAACAAATACCCACACACATATGAGTGCACTGATCATAATGAGGATATGGCAGGCACATGTTTGATAACAAAGTGTGTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 90 bp ACTTTGTTATCAAACATGTGCCTGCCATATCCTCATTATGATCAGTaGACTCATATGTGTGTGGGTATTTGTTTGTGTGTGTGTGTAATC +
Preference number: 1 (lower is better)
Translates to: TLLSNMCLPYPHYDQ*THMCVGICLCVCVI
Trigger: GATTACACACACACACAAACAAATACCCACACACATATGAGTGCACTGATCATAATGAGGATATGGCAGGCACATGTTTGATAACAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCGCGAGCGCGCCCACCTaGGCGCAATGGTTGGTAACA +
Preference number: 2 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCASAPT*AQWLVT
Trigger: TGTTACCAACCATTGCGCGCAGGTGGGCGCGCTCGC...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CAA 90 bp GGGTCCCCGGTCGAAAGGACCTCAACTGCACCTGTAAGGCCTGCCTaGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: GSPVERTSTAPVRPA*GGLRALACPGLAGP
Trigger: AGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCGACCGGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTAGCGGAGGCTCAGGCTaGGCCGGGAGAAGAACCGTG +
Preference number: 2 (lower is better)
Translates to: KFASEKAGERAHLRAMVGSGGSG*AGRRTV
Trigger: CACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCT...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTCGCGGTGGAGGTCCCTaGAGGGCCCACGTGCGGTGC +
Preference number: 2 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVRGGGP*RAHVRC
Trigger: GCACCGCACGTGGGCCCTGCAGGGACCTCCACCGCG...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGATGGAGGCAGCTTCCTaGGCCCGGCATCCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLMEAAS*ARHPLH
Trigger: GTGGAGAGGATGCCGGGCCCAGGAAGCTGCCTCCAT...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR TCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCCCTGCGGTGGGCGGCTaGAGACCACACTCCATTAGA +
Preference number: 2 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSPAVGG*RPHSIR
Trigger: TCTAATGGAGTGTGGTCTTCAGCCGCCCACCGCAGG...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGTGCACCTGTAAGGCCTaGCTTGGGTGGTCTGCGGGC +
Preference number: 2 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVCTCKA*LGWSAG
Trigger: GCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCA...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR TCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGCTCAAAACCAAGGCCTaGGCCACACGGCAACAGCGA +
Preference number: 2 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLLKTKA*ATRQQR
Trigger: TCGCTGTTGCCGTGTGGCTCAGGCCTTGGTTTTGAG...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTAAGGGCCCACGTGCGGTaGCCACGACCCCGCGGGGAT +
Preference number: 2 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLRAHVR*PRPRGD
Trigger: ATCCCCGCGGGGTCGTGGGCACCGCACGTGGGCCCT...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGCTGCGGGCCCTTGCATaGCCGGGACTCGCAGGACCT +
Preference number: 2 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLLRALA*PGLAGP
Trigger: AGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAG...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTCTGCCTTGGGTGGTCTaGGGGCCCTTGCATGCCCGG +
Preference number: 2 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCLPWVV*GPLHAR
Trigger: CCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAG...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCCGAAAGGACCTCAACTaGACCTGTAAGGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSRKDLN*TCKACL
Trigger: AAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCG...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTCGCCGGTGGGAGCTGTaGCCTTTCGCTCAGCGGAGG +
Preference number: 2 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCRRWEL*PFAQRR
Trigger: CCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCG...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCGTAGCTGCTCCCAGTTaGTGGGAAAAGTTTGCTTCG +
Preference number: 2 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSVAAPS*WEKFAS
Trigger: CGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTAC...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTTGGTCTGCGGGCCCTTaGATGCCCGGGACTCGCAGG +
Preference number: 2 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFWSAGP*MPGTRR
Trigger: CCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCA...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR TCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTTCAGTGAATCACAGTaGGCCTGGATCTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSFSESQ*AWISAM
Trigger: CATTGCTGAGATCCAGGCTCACTGTGATTCACTGAA...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCCTGCCTGGCAGGGCTaGGAGGGAAGAGCGGGCGGC +
Preference number: 2 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVPAWQG*EGRAGG
Trigger: GCCGCCCGCTCTTCCCTCCCAGCCCTGCCAGGCAGG...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTATCGCAGGACCTGCGGTaGGCGGCTGAAGACCACACT +
Preference number: 2 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLSQDLR*AAEDHT
Trigger: AGTGTGGTCTTCAGCCGCCCACCGCAGGTCCTGCGA...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR TCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGTCACCTCTATGCCTGTaGATTATCCAATTACTCTGC +
Preference number: 2 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLSPLCL*IIQLLC
Trigger: GCAGAGTAATTGGATAATTCACAGGCATAGAGGTGA...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR TCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCGCCATATCCTCATTATaGTCAGTGCACTCATATGTG +
Preference number: 2 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSAISSL*SVHSYV
Trigger: CACATATGAGTGCACTGATCATAATGAGGATATGGC...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCCCTCATTATGATCAGTaGACTCATATGTGTGTGGGT +
Preference number: 2 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSPHYDQ*THMCVG
Trigger: ACCCACACACATATGAGTGCACTGATCATAATGAGG...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR TCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTAGAACAAACCCAGCTGTaGCCACCCACCACCCAGATG +
Preference number: 2 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLEQTQL*PPTTQM
Trigger: CATCTGGGTGGTGGGTGGTCACAGCTGGGTTTGTTC...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR TCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCGCATGGATAGGAGAATaGATTTTCCAAAAGTCACCT +
Preference number: 2 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSAWIGE*IFQKSP
Trigger: AGGTGACTTTTGGAAAATTCATTCTCCTATCCATGC...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAGGGACTCGCAGGACCTaGGGTGGGCGGCTGAAGACC +
Preference number: 2 (lower is better)
Translates to: WLMSYRNARRCYIECTFLGTRRT*GGRLKT
Trigger: GGTCTTCAGCCGCCCACCGCAGGTCCTGCGAGTCCC...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTGGCATAGAGGTCGGTTaGATTTCCCCGGAAGCTGCA +
Preference number: 2 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCGIEVG*ISPEAA
Trigger: TGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCC...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTAAAATCCTCCGCCGGTaGGAGCTGTGGCCTTTCGCT +
Preference number: 2 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFKILRR*ELWPFA
Trigger: AGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTT...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTGGGGCCAGGAGTGTCTaGGAGATTCCTGCCATCAAA +
Preference number: 2 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCGARSV*EIPAIK
Trigger: TTTGATGGCAGGAATCTCCCAGACACTCCTGGCCCC...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAAGGAATCTCCCGCGGTaGAGGTCCCTGCAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: WLMSYRNARRCYIECTFLRNLPR*RSLQGP
Trigger: TGGGCCCTGCAGGGACCTCCACCGCGGGAGATTCCT...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGCTCTGCATCTGCTTTTaGTTGTTTCACCCAACTTTT +
Preference number: 2 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVLCICF*LFHPTF
Trigger: AAAAGTTGGGTGAAACAACCAAAAGCAGATGCAGAG...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTAGGTAGAACCCAGTCGTaGAAGCCTGGTTCAGCATGG +
Preference number: 2 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLGRTQS*KPGSAW
Trigger: CCATGCTGAACCAGGCTTCCACGACTGGGTTCTACC...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAAAGGCCTGCCTTGGGTaGTCTGCGGGCCCTTGCATG +
Preference number: 2 (lower is better)
Translates to: WLMSYRNARRCYIECTFLKACLG*SAGPCM
Trigger: CATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTT...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTAAGCAATGGCTCCTCCTaGAAGTTCTTCCAATCAAGG +
Preference number: 2 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLSNGSS*KFFQSR
Trigger: CCTTGATTGGAAGAACTTCCAGGAGGAGCCATTGCT...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGATTATCCAATTACTCTaGCGGCCTGAAATGTCCTTT +
Preference number: 2 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLIIQLL*RPEMSF
Trigger: AAAGGACATTTCAGGCCGGCAGAGTAATTGGATAAT...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTTGTTATTGCTCTGGGTaGTTATCAGCTTCTATAGCT +
Preference number: 2 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCCYCSG*LSASIA
Trigger: AGCTATAGAAGCTGATAACCACCCAGAGCAATAACA...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTATTGCTGGGAAAAGTTTaGTTCGGAGAAGGCAGGCGA +
Preference number: 2 (lower is better)
Translates to: WLMSYRNARRCYIECTFLLLGKV*FGEGRR
Trigger: TCGCCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAA...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGTTAAGTCTCCGTAGCTaGTCCCAGTTGCTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVLSLRS*SQLLGK
Trigger: TTTTCCCAGCAACTGGGAGCAGCTACGGAGACTTAA...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CAA 90 bp TTTGAGCCAACGATTAAATATGGATCAATAGAACAGCTATTCGGATaGGTAAGACCCAAACCTCCTCTTTTTGGTTCAGGAGGAAGGAAT +
Preference number: 2 (lower is better)
Translates to: FEPTIKYGSIEQLFG*VRPKPPLFGSGGRN
Trigger: ATTCCTTCCTCCTGAACCAAAAAGAGGAGGTTTGGGTCTTACCAATCCGAATAGCTGTTCTATTGATCCATATTTAATCGTTGGCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR GCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGTTGTTATCAAACATGTaGCTGCCATATCCTCATTAT +
Preference number: 2 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLLLSNM*LPYPHY
Trigger: ATAATGAGGATATGGCAGGCACATGTTTGATAACAA...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CAA 90 bp TCATATGTGTGTGGGTATTTGTTTGTGTGTGTGTGTAATCAGGGCTaGAACCAAAGATCATTTACAGAAGACAGATCTGTTCCCTTTGTT +
Preference number: 2 (lower is better)
Translates to: SYVCGYLFVCVCNQG*NQRSFTEDRSVPFV
Trigger: AACAAAGGGAACAGATCTGTCTTCTGTAAATGATCTTTGGTTCAAGCCCTGATTACACACACACACAAACAAATACCCACACACATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 72 bp GTCAAACGTCAAGGAATCTCCCGCGGTGGAGGTCCCTaGAGGGCCCACGTGCGGTGCCCACGACCCCGCGGG +
Preference number: 3 (lower is better)
Translates to: VKRQGISRGGGP*RAHVRCPRPRG
Trigger: CCCGCGGGGTCGTGGGCACCGCACGTGGGCCCTGCAGGGACCTCCACCGCGGGAGATTCCTTGACGTTTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 72 bp ACCTGTAAGGCCTGCCTTGGGTGGTCTGCGGGCCCTTaGATGCCCGGGACTCGCAGGACCTGCGGTGGGCGG +
Preference number: 3 (lower is better)
Translates to: TCKACLGWSAGP*MPGTRRTCGGR
Trigger: CCGCCCACCGCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 72 bp CCCGGTCGAAAGGACCTCAACTGCACCTGTAAGGCCTaGCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGG +
Preference number: 3 (lower is better)
Translates to: PGRKDLNCTCKA*LGWSAGPCMPG
Trigger: CCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCGACCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 72 bp GGTCATACGGGGGTCCCCGGTCGAAAGGACCTCAACTaGACCTGTAAGGCCTGCCTTGGGTGGTCTGCGGGC +
Preference number: 3 (lower is better)
Translates to: GHTGVPGRKDLN*TCKACLGWSAG
Trigger: GCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCGACCGGGGACCCCCGTATGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp GGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCGGTaGGCGGCTGAAGACCACACTCCATTAGACAGGTCA +
Preference number: 3 (lower is better)
Translates to: GPLHARDSQDLR*AAEDHTPLDRS
Trigger: TGACCTGTCTAATGGAGTGTGGTCTTCAGCCGCCCACCGCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp AAGGACCTCAACTGCACCTGTAAGGCCTGCCTTGGGTaGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGG +
Preference number: 3 (lower is better)
Translates to: KDLNCTCKACLG*SAGPCMPGTRR
Trigger: CCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR GCA 72 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTaGTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCG +
Preference number: 3 (lower is better)
Translates to: SLRSCSQLLGKV*FGEGRRARPPA
Trigger: CGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp GCATGCCCGGGACTCGCAGGACCTGCGGTGGGCGGCTaGAGACCACACTCCATTAGACAGGTCAAACGTCAA +
Preference number: 3 (lower is better)
Translates to: ACPGLAGPAVGG*RPHSIRQVKRQ
Trigger: TTGACGTTTGACCTGTCTAATGGAGTGTGGTCTTCAGCCGCCCACCGCAGGTCCTGCGAGTCCCGGGCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp AAAGATCATTTTAAAATCCTCCGCCGGTGGGAGCTGTaGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGG +
Preference number: 3 (lower is better)
Translates to: KDHFKILRRWEL*PFAQRRLRLGR
Trigger: CCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAAATGATCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp GACCCAGGCAAAGATCATTTTAAAATCCTCCGCCGGTaGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: DPGKDHFKILRR*ELWPFAQRRLR
Trigger: CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAAATGATCTTTGCCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp GCTGGCCTGAAGTTTCCCAGAGTCTTCCCACTGGCCTaGGTAGAACCCAGTCGTGGAAGCCTGGTTCAGCAT +
Preference number: 3 (lower is better)
Translates to: AGLKFPRVFPLA*VEPSRGSLVQH
Trigger: ATGCTGAACCAGGCTTCCACGACTGGGTTCTACCCAGGCCAGTGGGAAGACTCTGGGAAACTTCAGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp GCGCCCACCTGCGCGCAATGGTTGGTAACACTTCCCTaGACCCACAGGCCGACCCAGGCAAAGATCATTTTA +
Preference number: 3 (lower is better)
Translates to: APTCAQWLVTLP*THRPTQAKIIL
Trigger: TAAAATGATCTTTGCCTGGGTCGGCCTGTGGGTTCAGGGAAGTGTTACCAACCATTGCGCGCAGGTGGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp GCAATGGCTCCTCCTGGAAGTTCTTCCAATCAAGGCTaGCCTGAAGTTTCCCAGAGTCTTCCCACTGGCCTG +
Preference number: 3 (lower is better)
Translates to: AMAPPGSSSNQG*PEVSQSLPTGL
Trigger: CAGGCCAGTGGGAAGACTCTGGGAAACTTCAGGCCAGCCTTGATTGGAAGAACTTCCAGGAGGAGCCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp ACCTCCACAACTTCAAGTCAGGAACAAACCCAGCTGTaGCCACCCACCACCCAGATGGGCTCAAAACCAAGG +
Preference number: 3 (lower is better)
Translates to: TSTTSSQEQTQL*PPTTQMGSKPR
Trigger: CCTTGGTTTTGAGCCCATCTGGGTGGTGGGTGGTCACAGCTGGGTTTGTTCCTGACTTGAAGTTGTGGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp CAATACGGCAGAATTAACTCATCGTGCTTTCTGATATaGAGGCAGCTTCCTGGGCCCGGCATCCTCTCCACT +
Preference number: 3 (lower is better)
Translates to: QYGRINSSCFLI*RQLPGPGILST
Trigger: AGTGGAGAGGATGCCGGGCCCAGGAAGCTGCCTCCATATCAGAAAGCACGATGAGTTAATTCTGCCGTATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTCCTGTAAGGCCTGCCTaGGGTGGTCTGCGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFPVRPA*GGLRAL
Trigger: AAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGG...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGAGTACAATGATAAGCTaGCTTCTGGCTCACCCTAAT +
Preference number: 3 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLSTMIS*LLAHPN
Trigger: ATTAGGGTGAGCCAGAAGCAAGCTTATCATTGTACT...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp CATCTGTGTGTTTACCCCTCAGAAGCCAGAGCCTCCTaGGATGCTAACACGACTCCCAGATATAATCCCAGT +
Preference number: 3 (lower is better)
Translates to: HLCVYPSEARAS*DANTTPRYNPS
Trigger: ACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGGAGGCTCTGGCTTCTGAGGGGTAAACACACAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp TTTTCAGTGAATCACAGTGAGCCTGGATCTCAGCAATaGCTCCTCCTGGAAGTTCTTCCAATCAAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: FSVNHSEPGSQQ*LLLEVLPIKAG
Trigger: GCCAGCCTTGATTGGAAGAACTTCCAGGAGGAGCCATTGCTGAGATCCAGGCTCACTGTGATTCACTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGGTTGCTGGGAAAAGTTaGCTTCGGAGAAGGCAGGCG +
Preference number: 3 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLVAGKS*LRRRQA
Trigger: CGCCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAAC...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGATCAAAACTCTGACATaGTCCAAGGCATATCCCCTT +
Preference number: 3 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVIKTLT*SKAYPL
Trigger: AAGGGGATATGCCTTGGACAATGTCAGAGTTTTGAT...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCATAGTGCGTGACTACTaGTGTCTTTATCACATGACA +
Preference number: 3 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSIVRDY*CLYHMT
Trigger: TGTCATGTGATAAAGACACAAGTAGTCACGCACTAT...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp GGAGGCCGTTTGTTTCTAGAAAAGCCAGCAACTAGATaGGGCCAGGCAGAGCAAGAGTCCTTTGTAAAGTTC +
Preference number: 3 (lower is better)
Translates to: GGRLFLEKPATR*GQAEQESFVKF
Trigger: GAACTTTACAAAGGACTCTTGCTCTGCCTGGCCTCATCTAGTTGCTGGCTTTTCTAGAAACAAACGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CCA 72 bp TGGCTCTCCCCTTATTTTCTCACTCCTGGGTGCAGCTaGTTACTGGAAACGTCACCTACCTTTGTGATGTTA +
Preference number: 3 (lower is better)
Translates to: WLSPYFLTPGCS*LLETSPTFVML
Trigger: TAACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGAAAATAAGGGGAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp TCTATGCCTGTGAATTATCCAATTACTCTGCCGGCCTaGAATGTCCTTTCCAACACATTGACCAACAGGCCC +
Preference number: 3 (lower is better)
Translates to: SMPVNYPITLPA*NVLSNTLTNRP
Trigger: GGGCCTGTTGGTCAATGTGTTGGAAAGGACATTTCAGGCCGGCAGAGTAATTGGATAATTCACAGGCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp AAATATCCAGTGACAGCCCTTTCGCTACATTTTCAGTaGATCACAGTGAGCCTGGATCTCAGCAATGGCTCC +
Preference number: 3 (lower is better)
Translates to: KYPVTALSLHFQ*ITVSLDLSNGS
Trigger: GGAGCCATTGCTGAGATCCAGGCTCACTGTGATTCACTGAAAATGTAGCGAAAGGGCTGTCACTGGATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp GTGTTATTGCTCTGGGTGGTTATCAGCTTCTATAGCTaGACATTGGTCATAAATCCTCATCGGGCCCTACAT +
Preference number: 3 (lower is better)
Translates to: VLLLWVVISFYS*TLVINPHRALH
Trigger: ATGTAGGGCCCGATGAGGATTTATGACCAATGTTCAGCTATAGAAGCTGATAACCACCCAGAGCAATAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp TTAACATACACACGGGCATACACTCACCACTTTGAGTaGAATGGTGAAGACCACCATTCAAACGGGCACAAT +
Preference number: 3 (lower is better)
Translates to: LTYTRAYTHHFE*NGEDHHSNGHN
Trigger: ATTGTGCCCGTTTGAATGGTGGTCTTCACCATTTCACTCAAAGTGGTGAGTGTATGCCCGTGTGTATGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTAGCTGCTCCCAGTaGCTGGGAAAAGTTTGCTTC +
Preference number: 3 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVRSCSQ*LGKVCF
Trigger: GAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACG...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGTTAATTAGATTTTCGTaGCAGACCTCTTCTCCCCTC +
Preference number: 3 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLLIRFS*QTSSPL
Trigger: GAGGGGAGAAGAGGTCTGCAACGAAAATCTAATTAA...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR-3UTR CAA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGTGTGTGGGTATTTGTTaGTGTGTGTGTGTAATCAGG +
Preference number: 3 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLCVGIC*CVCVIR
Trigger: CCTGATTACACACACACACAAACAAATACCCACACA...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR TCA 72 bp TTTGTTATCAAACATGTGCCTGCCATATCCTCATTATaGTCAGTGCACTCATATGTGTGTGGGTATTTGTTT +
Preference number: 3 (lower is better)
Translates to: FVIKHVPAISSL*SVHSYVCGYLF
Trigger: AAACAAATACCCACACACATATGAGTGCACTGATCATAATGAGGATATGGCAGGCACATGTTTGATAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCCCGGGGAGCCAGCCGTaGCTCTGCCTCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCPGSQP*LCLWLC
Trigger: GCAGAGCCAGAGGCAGAGGCACGGCTGGCTCCCCGG...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCTCCAGTAGCTGCCCTTaGCCGGCCGCCCTTTCTCGC +
Preference number: 4 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCSSSCP*PAALSR
Trigger: GCGAGAAAGGGCGGCCGGGCAAGGGCAGCTACTGGA...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCTCCCCGGCCGCTCCGTaGTCTGTCCCTTCTTCATGG +
Preference number: 4 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCSPAAP*SVPSSW
Trigger: CCATGAAGAAGGGACAGAGCACGGAGCGGCCGGGGA...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGCAGGCGGGAGATTaGGGGGCCCGAGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLRLQAGD*GARAPC
Trigger: GCAGGGGGCTCGGGCCCCGCAATCTCCCGCCTGCAG...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCCGAAGAGGTGACTCATaGCAAGCGAGAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCRRGDS*QARACA
Trigger: AGCGCAGGCTCTCGCTTGCCATGAGTCACCTCTTCG...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGATCGTGCTTTCTGATATaGAGGCAGCTTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AGGSCGLSLSGGSGWAGRSCFLI*RQLPGP
Trigger: GGGCCCAGGAAGCTGCCTCCATATCAGAAAGCACGA...TCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCCGAAAGGACCTCAACTaGACCTGTAAGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCRKDLN*TCKACL
Trigger: AAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCG...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCGCCGGGCCCAGGCTTaGCACCCCCTAGGAGTTCGT +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLRRRAQA*HPLGVR
Trigger: ACGAACTCCTAGGGGGTGCCAAGCCTGGGCCCGGCG...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTAGGAATCTCCCGCGGTaGAGGTCCCTGCAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGRNLPR*RSLQGP
Trigger: TGGGCCCTGCAGGGACCTCCACCGCGGGAGATTCCT...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CAA 72 bp GTCGAAAGGACCTCAACTGCACCTGTAAGGCCTGCCTaGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: VERTSTAPVRPA*GGLRALACPGL
Trigger: GAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCAGTTGAGGTCCTTTCGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCCGCGGTGGAGGTCCCTaGAGGGCCCACGTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSRGGGP*RAHVRC
Trigger: GCACCGCACGTGGGCCCTGCAGGGACCTCCACCGCG...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGAGGTGCAGCTGGTTACTaGAAACGTCACCTACCTTTG +
Preference number: 4 (lower is better)
Translates to: AGGSCGLSLSGGSGWAGRGAAGY*KRHLPL
Trigger: CAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACC...TCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGAGGGCCCACGTGCGGTaGCCACGACCCCGCGGGGAT +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVRAHVR*PRPRGD
Trigger: ATCCCCGCGGGGTCGTGGGCACCGCACGTGGGCCCT...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGATGGAGGCAGCTTCCTaGGCCCGGCATCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLRMEAAS*ARHPLH
Trigger: GTGGAGAGGATGCCGGGCCCAGGAAGCTGCCTCCAT...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCGGGGATCGAAGAGGTaGCTCATGGCAAGCGAGAGC +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLRRGSKR*LMASES
Trigger: GCTCTCGCTTGCCATGAGTCACCTCTTCGATCCCCG...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTGAAGCCAGAGCCTCCTaGGATGCTAACACGACTCCC +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGEARAS*DANTTP
Trigger: GGGAGTCGTGTTAGCATCTCAGGAGGCTCTGGCTTC...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGTGGCAAGCGAGAGCCTaGGCTGCGCTCCCCGCAACG +
Preference number: 4 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRWQARA*AALPAT
Trigger: CGTTGCGGGGAGCGCAGCGCAGGCTCTCGCTTGCCA...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCCATTGTTTGCTTTACTaGAAGTGGAGTACCGTGTCG +
Preference number: 4 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCHCLLY*KWSTVS
Trigger: CGACACGGTACTCCACTTCCAGTAAAGCAAACAATG...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTAGGGTCTGGGCAGGCTaGCTCTGGCTTTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGRVWAG*LWLSAV
Trigger: TACAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCT...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGATTATTTTCTCACTCCTaGGTGCAGCTGGTTACTGGA +
Preference number: 4 (lower is better)
Translates to: AGGSCGLSLSGGSGWAGRLFSHS*VQLVTG
Trigger: TCCAGTAACCAGCTGCACCCAGGAGTGAGAAAATAA...TCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGGAACAAACCCAGCTGTaGCCACCCACCACCCAGATG +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLREQTQL*PPTTQM
Trigger: CATCTGGGTGGTGGGTGGTCACAGCTGGGTTTGTTC...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCGCCATATCCTCATTATaGTCAGTGCACTCATATGTG +
Preference number: 4 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCAISSL*SVHSYV
Trigger: CACATATGAGTGCACTGATCATAATGAGGATATGGC...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGGGCGGCTTCTGGCCCTaGTTTCCCGCCAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLGGFWP*FPARML
Trigger: CAGCATCCTGGCGGGAAAGCAGGGCCAGAAGCCGCC...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTACGGCCGCTGCGCCCTaGGCAGCGTCACCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVTAAAP*AASPAS
Trigger: GGACGCTGGTGACGCTGCCCAGGGCGCAGCGGCCGT...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTCCTGCCTGGCAGGGCTaGGAGGGAAGAGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVPAWQG*EGRAGG
Trigger: GCCGCCCGCTCTTCCCTCCCAGCCCTGCCAGGCAGG...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTGGATGCTGTCTATGCTaGAGCTCTTGGACTTGTCGG +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGGCCLC*SSWTCR
Trigger: CCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCC...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCGCATCAGGGAAGCGTTaGAAGGCGGACGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSASGKR*KADGGW
Trigger: CCAGCCTCCGTCCGCCTTTCAACGCTTCCCTGATGC...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGGCGAGCGCGCCCACCTaGGCGCAATGGTTGGTAACA +
Preference number: 4 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLASAPT*AQWLVT
Trigger: TGTTACCAACCATTGCGCGCAGGTGGGCGCGCTCGC...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGTCGCAGGACCTGCGGTaGGCGGCTGAAGACCACACT +
Preference number: 4 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRSQDLR*AAEDHT
Trigger: AGTGTGGTCTTCAGCCGCCCACCGCAGGTCCTGCGA...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCAAGGCCTGCCTTGGGTaGTCTGCGGGCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSKACLG*SAGPCM
Trigger: CATGCAAGGGCCCGCAGACCACCCAAGGCAGGCCTT...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTACTCCTGGGTGCAGCTaGTTACTGGAAACGTCACCT +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGTPGCS*LLETSP
Trigger: AGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGT...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp GCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGAACCAAGCCTGGATCTTaGAAAAACATGGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: AGGSCGLSLSGGSGWAGRTKPGS*KNMEIK
Trigger: TTTGATTTCCATGTTTTTTCAAGATCCAGGCTTGGT...TCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTTGGTCTGCGGGCCCTTaGATGCCCGGGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVWSAGP*MPGTRR
Trigger: CCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCA...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGTTGGTAACACTTCCCTaGACCCACAGGCCGACCCAG +
Preference number: 4 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLLVTLP*THRPTQ
Trigger: CTGGGTCGGCCTGTGGGTTCAGGGAAGTGTTACCAA...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTATTACTCTGCCGGCCTaGAATGTCCTTTCCAACACA +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGITLPA*NVLSNT
Trigger: TGTGTTGGAAAGGACATTTCAGGCCGGCAGAGTAAT...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCCGGGAGAAGAACCGTaGCATTGTTTGCTTTACTGG +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLRPGEEP*HCLLYW
Trigger: CCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGG...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGTTAAGTCTCCGTAGCTaGTCCCAGTTGCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLRLSLRS*SQLLGK
Trigger: TTTTCCCAGCAACTGGGAGCAGCTACGGAGACTTAA...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGCACCCACCACCCAGATaGGCTCAAAACCAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVHPPPR*AQNQGL
Trigger: CAGGCCTTGGTTTTGAGCCCATCTGGGTGGTGGGTG...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTACTCTGCCTCTGGCTCTaGCGCTCTCCCCGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLLCLWL*RSPRPL
Trigger: GAGCGGCCGGGGAGAGCGGCAGAGCCAGAGGCAGAG...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTATCCCTCTCTCTCTCTaGATCTGCTTTTGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGIPLSL*ICFWLF
Trigger: AAACAACCAAAAGCAGATGCAGAGAGAGAGAGGGAT...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGGGCATAGAGGTCGGTTaGATTTCCCCGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVGIEVG*ISPEAA
Trigger: TGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCC...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGACTCTTATGGTTCACTaGAGGCCCAGGAGGCCGTTT +
Preference number: 4 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRTLMVH*RPRRPF
Trigger: AAACGGCCTCCTGGGCCTCCAGTGAACCATAAGAGT...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTTGGAAATCAAAACTCTaGCATTGTCCAAGGCATATC +
Preference number: 4 (lower is better)
Translates to: KFASEKAGERAHLRAMVGWKSKL*HCPRHI
Trigger: GATATGCCTTGGACAATGTCAGAGTTTTGATTTCCA...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTACTGCCTTGGGTGGTCTaGGGGCCCTTGCATGCCCGG +
Preference number: 4 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLLPWVV*GPLHAR
Trigger: CCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAG...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTACGCCGGTGGGAGCTGTaGCCTTTCGCTCAGCGGAGG +
Preference number: 4 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLRRWEL*PFAQRR
Trigger: CCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCG...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGCCAGTCGTGGAAGCCTaGTTCAGCATGGATAGGAGA +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVPVVEA*FSMDRR
Trigger: TCTCCTATCCATGCTGAACCAGGCTTCCACGACTGG...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCAGTTCTCTGTCCTTGTaGACGGAGGGAAAAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSSSLSL*TEGKVL
Trigger: GAGAACTTTTCCCTCCGTTCACAAGGACAGAGAACT...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTAAGCCAGCAACTAGATaGGGCCAGGCAGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVKPATR*GQAEQE
Trigger: CTCTTGCTCTGCCTGGCCTCATCTAGTTGCTGGCTT...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTAGCGGAGGCTCAGGCTaGGCCGGGAGAAGAACCGTG +
Preference number: 4 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFSGGSG*AGRRTV
Trigger: CACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCT...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGAGCAATGGCTCCTCCTaGAAGTTCTTCCAATCAAGG +
Preference number: 4 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRSNGSS*KFFQSR
Trigger: CCTTGATTGGAAGAACTTCCAGGAGGAGCCATTGCT...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGCCTGCGGTGGGCGGCTaGAGACCACACTCCATTAGA +
Preference number: 4 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLPAVGG*RPHSIR
Trigger: TCTAATGGAGTGTGGTCTTCAGCCGCCCACCGCAGG...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGATACTTGGGTTAAAGTaGAAGGACTCAGTACTTGAT +
Preference number: 4 (lower is better)
Translates to: FKILRRWELWPFAQRRLRILGLK*KDSVLD
Trigger: ATCAAGTACTGAGTCCTTTCACTTTAACCCAAGTAT...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTATGCACCTGTAAGGCCTaGCTTGGGTGGTCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLCTCKA*LGWSAG
Trigger: GCCCGCAGACCACCCAAGGCAGGCCTTACAGGTGCA...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGTCTTCCAATCAAGGCTaGCCTGAAGTTTCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVSSNQG*PEVSQS
Trigger: ACTCTGGGAAACTTCAGGCCAGCCTTGATTGGAAGA...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGCTCAAAACCAAGGCCTaGGCCACACGGCAACAGCGA +
Preference number: 4 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLLKTKA*ATRQQR
Trigger: TCGCTGTTGCCGTGTGGCTCAGGCCTTGGTTTTGAG...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTTCCTTTCCAACACATTaGCCAACAGGCCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVSFPTH*PTGPLD
Trigger: ATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGGA...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGTCGCTACATTTTCAGTaGATCACAGTGAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVSLHFQ*ITVSLD
Trigger: ATCCAGGCTCACTGTGATTCACTGAAAATGTAGCGA...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGAGCGAGAGCCTGCGCTaGGCTCCCCGCAACGCAGGA +
Preference number: 4 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVSESLR*APRNAG
Trigger: TCCTGCGTTGCGGGGAGCGCAGCGCAGGCTCTCGCT...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTGTAGCTGCTCCCAGTTaGTGGGAAAAGTTTGCTTCG +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVVAAPS*WEKFAS
Trigger: CGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTAC...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGGGGACTCGCAGGACCTaGGGTGGGCGGCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVGTRRT*GGRLKT
Trigger: GGTCTTCAGCCGCCCACCGCAGGTCCTGCGAGTCCC...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGCCTCATTATGATCAGTaGACTCATATGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLPHYDQ*THMCVG
Trigger: ACCCACACACATATGAGTGCACTGATCATAATGAGG...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGGACCAACAGGCCCTCTaGATTCAAAGTTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVDQQAL*IQSLSS
Trigger: TGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTC...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTGTCTTCCCACTGGCCTaGGTAGAACCCAGTCGTGGA +
Preference number: 4 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCVFPLA*VEPSRG
Trigger: TCCACGACTGGGTTCTACCCAGGCCAGTGGGAAGAC...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGCAGAGGCTGAGAGTTTaGGATAGCAAAATATCCAGT +
Preference number: 4 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRQRLRV*DSKISS
Trigger: ACTGGATATTTTGCTATCCCAAACTCTCAGCCTCTG...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGGCATGGATAGGAGAATaGATTTTCCAAAAGTCACCT +
Preference number: 4 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLAWIGE*IFQKSP
Trigger: AGGTGACTTTTGGAAAATTCATTCTCCTATCCATGC...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGTTCCCTTTGTTTAGATaGGAGCAGAGAGGTATTCCT +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVFPLFR*EQRGIP
Trigger: AGGAATACCTCTCTGCTCTCATCTAAACAAAGGGAA...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTACTGCGGGCCCTTGCATaGCCGGGACTCGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLLRALA*PGLAGP
Trigger: AGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAG...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCAGAATTAACTCATCGTaGTTTCTGATATGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSRINSS*FLIWRQ
Trigger: CTGCCTCCATATCAGAAAGCACGATGAGTTAATTCT...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTAAAAATCCTCCGCCGGTaGGAGCTGTGGCCTTTCGCT +
Preference number: 4 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLKILRR*ELWPFA
Trigger: AGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTT...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGGGTAGAACCCAGTCGTaGAAGCCTGGTTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLGRTQS*KPGSAW
Trigger: CCATGCTGAACCAGGCTTCCACGACTGGGTTCTACC...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGTGTGTAATCAGGGCTTaGACCAAAGATCATTTACAG +
Preference number: 4 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVCVIRA*TKDHLQ
Trigger: CTGTAAATGATCTTTGGTTCAAGCCCTGATTACACA...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTACCTGAAGGCGGCTTCTaGCCCTGCTTTCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLPEGGF*PCFPAR
Trigger: CCTGGCGGGAAAGCAGGGCCAGAAGCCGCCTTCAGG...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGAAAGTGTTATTGCTCTaGGTGGTTATCAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRKVLLL*VVISFY
Trigger: ATAGAAGCTGATAACCACCCAGAGCAATAACACTTT...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GTGATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCACAACCTTTATTTCATaGAAACAAGACTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: VMLTLTCQGLGRLALAFSTTFIS*KQDSIH
Trigger: GTGGATGGAGTCTTGTTTCCATGAAATAAAGGTTGT...GCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTCAATCAAGGCTGGCCTaGAGTTTCCCAGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFQSRLA*SFPESS
Trigger: GGAAGACTCTGGGAAACTTCAGGCCAGCCTTGATTG...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGACTCATCGTGCTTTCTaGTATGGAGGCAGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLTHRAF*YGGSFL
Trigger: CAGGAAGCTGCCTCCATATCAGAAAGCACGATGAGT...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTATTGAGCGTGACCCTCTaGTCGGGCGCGTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLLSVTL*SGASWI
Trigger: GATCCAGGACGCGCCCGAGCAGAGGGTCACGCTCAA...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGAAGCCGCCCTGGACATaGGGGTCGAGCATCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVKPPWT*GSSIRE
Trigger: TTCCCTGATGCTCGACCCGCATGTCCAGGGCGGCTT...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTACGTACAGATACAGCATaGGCGAGGCGGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLRTDTA*ARRPGQ
Trigger: CTGCCCTGGCCGCCTCGCCCATGCTGTATCTGTACG...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTCCTGGATCTCAGCAATaGCTCCTCCTGGAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCPGSQQ*LLLEVL
Trigger: AAGAACTTCCAGGAGGAGCCATTGCTGAGATCCAGG...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGTGGGCAGGCTGGCTCTaGCTTTCAGCTGTAACAATA +
Preference number: 4 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLWAGWL*LSAVTI
Trigger: TATTGTTACAGCTGAAAGCCAGAGCCAGCCTGCCCA...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGTTCAGTGAATCACAGTaGGCCTGGATCTCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLFSESQ*AWISAM
Trigger: CATTGCTGAGATCCAGGCTCACTGTGATTCACTGAA...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTACATTTCCCCGGAAGCTaGAAGCTGAACTTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLHFPGS*KLNLVV
Trigger: CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATG...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTTTGCTTTACTGGAAGTaGAGTACCGTGTCGGGAACC +
Preference number: 4 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFLLYWK*STVSGT
Trigger: GGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAA...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTACTCAGTACTTGATCTaGGTCTCAGGTATATTCAAA +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVTQYLI*VSGIFK
Trigger: TTTGAATATACCTGAGACTCAGATCAAGTACTGAGT...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTCATGAAGCCAGGAAGTaGACAAAATCATGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFHEARK*TKSWLS
Trigger: GGAGAGCCATGATTTTGTGCACTTCCTGGCTTCATG...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGAACCGTGCCATTGTTTaGTTTACTGGAAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLNRAIV*FTGSGV
Trigger: TACTCCACTTCCAGTAAAGCAAACAATGGCACGGTT...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTTTGTTATCAAACATGTaGCTGCCATATCCTCATTAT +
Preference number: 4 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVLLSNM*LPYPHY
Trigger: ATAATGAGGATATGGCAGGCACATGTTTGATAACAA...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTATCACCTCTATGCCTGTaGATTATCCAATTACTCTGC +
Preference number: 4 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLSPLCL*IIQLLC
Trigger: GCAGAGTAATTGGATAATTCACAGGCATAGAGGTGA...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp GATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCGTGACTACTTGTGTAAAGGACTCAGTACTTaGTCTGAGTCTCAGGTATAT +
Preference number: 4 (lower is better)
Translates to: DLKDLPPNLFPIVRDYLCKGLST*SESQVY
Trigger: ATATACCTGAGACTCAGATCAAGTACTGAGTCCTTT...ACACAAGTAGTCACGCACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGTTGCTGGGAAAAGTTTaGTTCGGAGAAGGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVLLGKV*FGEGRR
Trigger: TCGCCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAA...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAATGTTAACATTAACCTaGCAGGGTCTGGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLMLTLT*QGLGRL
Trigger: CAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACAT...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTCTCTGCATCTGCTTTTaGTTGTTTCACCCAACTTTT +
Preference number: 4 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFLCICF*LFHPTF
Trigger: AAAAGTTGGGTGAAACAACCAAAAGCAGATGCAGAG...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAACTCACCACTTTGAGTaGAATGGTGAAGACCACCAT +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLTHHFE*NGEDHH
Trigger: ATGGTGGTCTTCACCATTTCACTCAAAGTGGTGAGT...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CAA 72 bp CAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTaGTCATCATTTTTAGACAAGTCCTGGAAACTATTT +
Preference number: 4 (lower is better)
Translates to: QHIDQQALWIQS*SSFLDKSWKLF
Trigger: AAATAGTTTCCAGGACTTGTCTAAAAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
3UTR CAA 72 bp ACGATTAAATATGGATCAATAGAACAGCTATTCGGATaGGTAAGACCCAAACCTCCTCTTTTTGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: TIKYGSIEQLFG*VRPKPPLFGSG
Trigger: TCCTGAACCAAAAAGAGGAGGTTTGGGTCTTACCAATCCGAATAGCTGTTCTATTGATCCATATTTAATCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGTGTTATTGCTCTGGGTaGTTATCAGCTTCTATAGCT +
Preference number: 4 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVCYCSG*LSASIA
Trigger: AGCTATAGAAGCTGATAACCACCCAGAGCAATAACA...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAATTATCCAATTACTCTaGCGGCCTGAAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLIIQLL*RPEMSF
Trigger: AAAGGACATTTCAGGCCGGCAGAGTAATTGGATAAT...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR TCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAATCAGCTTCTATAGCTaGACATTGGTCATAAATCCT +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLISFYS*TLVINP
Trigger: AGGATTTATGACCAATGTTCAGCTATAGAAGCTGAT...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR GCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTATATCAAACATGTGCCTaGCATATCCTCATTATGATC +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLYQTCA*HILIMI
Trigger: GATCATAATGAGGATATGGCAGGCACATGTTTGATA...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CCA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTATCACACCCTTCCTCATaGTATCCCTTGAAATATTTT +
Preference number: 4 (lower is better)
Translates to: WLMSYRNARRCYIECTFLSHPSS*YPLKYF
Trigger: AAAATATTTCAAGGGATACCATGAGGAAGGGTGTGA...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 90 bp AGGCGGCCAGGAGCGAGGCACCCAGACGGCCGCCGGGCCCAGGCTTaGCACCCCCTAGGAGTTCGTCCCCTGAAGGCGGCTTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: RRPGARHPDGRRAQA*HPLGVRPLKAASGP
Trigger: AGGGCCAGAAGCCGCCTTCAGGGGACGAACTCCTAGGGGGTGCCAAGCCTGGGCCCGGCGGCCGTCTGGGTGCCTCGCTCCTGGCCGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 90 bp GCGAGGCGGCCAGGGCAGGCAGCCGGGGATCGAAGAGGTGACTCATaGCAAGCGAGAGCCTGCGCTGCGCTCCCCGCAACGCAGGAGACC +
Preference number: 5 (lower is better)
Translates to: ARRPGQAAGDRRGDS*QARACAALPATQET
Trigger: GGTCTCCTGCGTTGCGGGGAGCGCAGCGCAGGCTCTCGCTTGCCATGAGTCACCTCTTCGATCCCCGGCTGCCTGCCCTGGCCGCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320241.5
ENST00000593625.1
CDS-3UTR CAA 90 bp GCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGACCTGTAAGGCCTGCCTaGGGTGGTCTGCGGGCCCTT +
Preference number: 5 (lower is better)
Translates to: AGGSCGLSLSGGSGWAGRPVRPA*GGLRAL
Trigger: AAGGGCCCGCAGACCACCCAAGGCAGGCCTTACAGG...TCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp AAGTTTGCTTCGGAGAAGGCAGGCGAGCGCGCCCACCTGCGCGCAATGGTTGGTCCTGCAGGCGGGAGATaGCGGGGCCCGAGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: KFASEKAGERAHLRAMVGPAGGR*RGPSPL
Trigger: CAGGGGGCTCGGGCCCCGCAATCTCCCGCCTGCAGG...ACCAACCATTGCGCGCAGGTGGGCGCGCTCGCCTGCCTTCTCCGAAGCAAACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS GCA 90 bp GCCGTGCCTCTGCCTCTGGCTCTGCCGCTCTCCCCGGCCGCTCCGTaGTCTGTCCCTTCTTCATGGCTTCCTATCCCACAGCCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: AVPLPLALPLSPAAP*SVPSSWLPIPQPLL
Trigger: CAGGAGGGGCTGTGGGATAGGAAGCCATGAAGAAGGGACAGAGCACGGAGCGGCCGGGGAGAGCGGCAGAGCCAGAGGCAGAGGCACGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593625.1
CDS-3UTR CAA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCCGTAGCTGCTCCCAGTaGCTGGGAAAAGTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCRSCSQ*LGKVCF
Trigger: GAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACG...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 90 bp CCAGGCTTGGCACCCCCTAGGAGTTCGTCCCCTGAAGGCGGCTTCTaGCCCTGCTTTCCCGCCAGGATGCTGTCTATGCTGAAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: PGLAPPRSSSPEGGF*PCFPARMLSMLKLL
Trigger: CAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGAAGCCGCCTTCAGGGGACGAACTCCTAGGGGGTGCCAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 90 bp TCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTaGGCCGGGAGAAGAACCGTGCCATTGTTTGCTTTACTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SAGGSCGLSLSGGSG*AGRRTVPLFALLEV
Trigger: CACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS TCA 90 bp AAGGCGGCTTCTGGCCCTGCTTTCCCGCCAGGATGCTGTCTATGCTaGAGCTCTTGGACTTGTCGGAGCTCTTCGGAGAGCTGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: KAASGPAFPPGCCLC*SSWTCRSSSESCGR
Trigger: CCTCCCGCAGCTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGAAGCCGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS GCA 90 bp CAGCGGAGGCTCAGGCTGGGCCGGGAGAAGAACCGTGCCATTGTTTaGTTTACTGGAAGTGGAGTACCGTGTCGGGAACCTGCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: QRRLRLGREKNRAIV*FTGSGVPCREPAGG
Trigger: TCCCCCTGCAGGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp GCCTGCCTTGGGTGGTCTGCGGGCCCTTGCATGCCCGGGACTCGCAGGACCTGCAGAAGAACCGTGCCATaGTTTGCTTTACTGGAAGTG +
Preference number: 5 (lower is better)
Translates to: ACLGWSAGPCMPGTRRTCRRTVP*FALLEV
Trigger: CACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCT...GCAGGTCCTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCACCCAAGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS GCA 90 bp TTGGCACCCCCTAGGAGTTCGTCCCCTGAAGGCGGCTTCTGGCCCTaGTTTCCCGCCAGGATGCTGTCTATGCTGAAGCTCTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: LAPPRSSSPEGGFWP*FPARMLSMLKLLDL
Trigger: CAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGAAGCCGCCTTCAGGGGACGAACTCCTAGGGGGTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS GCA 90 bp GCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGAAGAACCGTaGCATTGTTTGCTTTACTGGAAGTGGAGTACCGTGTCGGGAACC +
Preference number: 5 (lower is better)
Translates to: AFRSAEAQAGPGEEP*HCLLYWKWSTVSGT
Trigger: GGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp GCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGAGTGTGTAATCAGGGCTaGAACCAAAGATCATTTACA +
Preference number: 5 (lower is better)
Translates to: AGGSCGLSLSGGSGWAGRVCNQG*NQRSFT
Trigger: TGTAAATGATCTTTGGTTCAAGCCCTGATTACACAC...TCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGGTCCTTTCCAACACATaGACCAACAGGCCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: FKILRRWELWPFAQRRLRVLSNT*TNRPSG
Trigger: TCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGGAC...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp GCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGAAGGTATTCCTTCAGATaGCCTAAGAGTACAATGATA +
Preference number: 5 (lower is better)
Translates to: AGGSCGLSLSGGSGWAGRRYSFR*PKSTMI
Trigger: TATCATTGTACTCTTAGGCAATCTGAAGGAATACCT...TCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGGTTGCTGGGAAAAGTTaGCTTCGGAGAAGGCAGGCG +
Preference number: 5 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLVAGKS*LRRRQA
Trigger: CGCCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAAC...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTGTGGTCTGCGGGCCCTaGCATGCCCGGGACTCGCAG +
Preference number: 5 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFVVCGP*HARDSQ
Trigger: CTGCGAGTCCCGGGCATGCAAGGGCCCGCAGACCAC...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCATACACTCACCACTTaGAGTGAAATGGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: FKILRRWELWPFAQRRLRHTLTT*SEMVKT
Trigger: GGTCTTCACCATTTCACTCAAAGTGGTGAGTGTATG...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TTTAAAATCCTCCGCCGGTGGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGATCAAAACTCTGACATaGTCCAAGGCATATCCCCTT +
Preference number: 5 (lower is better)
Translates to: FKILRRWELWPFAQRRLRIKTLT*SKAYPL
Trigger: AAGGGGATATGCCTTGGACAATGTCAGAGTTTTGAT...CCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCCACCGGCGGAGGATTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGCCGCCGGGCCCAGGCTaGGCACCCCCTAGGAGTTCG +
Preference number: 5 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVPPGPG*APPRSS
Trigger: CGAACTCCTAGGGGGTGCCAAGCCTGGGCCCGGCGG...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp GATGTTAACATTAACCTGCCAGGGTCTGGGCAGGCTGGCTCTGGCTTTCAGCTGGAACAGCTATTCGGATaGGTAAGACCCAAACCTCCT +
Preference number: 5 (lower is better)
Translates to: DVNINLPGSGQAGSGFQLEQLFG*VRPKPP
Trigger: AGGAGGTTTGGGTCTTACCAATCCGAATAGCTGTTC...CAGCTGAAAGCCAGAGCCAGCCTGCCCAGACCCTGGCAGGTTAATGTTAACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGCCAAACCTCCTCTTTTaGGTTCAGGAGGAAGGAATA +
Preference number: 5 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVPNLLF*VQEEGI
Trigger: TATTCCTTCCTCCTGAACCAAAAAGAGGAGGTTTGG...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGTGTGTGGGTATTTGTTaGTGTGTGTGTGTAATCAGG +
Preference number: 5 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRCVGIC*CVCVIR
Trigger: CCTGATTACACACACACACAAACAAATACCCACACA...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TGGCATAGAGGTCGGTTGCATTTCCCCGGAAGCTGCAAGCTGAACTTGGTTGTGTTAATTAGATTTTCGTaGCAGACCTCTTCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: WHRGRLHFPGSCKLNLVVLIRFS*QTSSPL
Trigger: GAGGGGAGAAGAGGTCTGCAACGAAAATCTAATTAA...CACAACCAAGTTCAGCTTGCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp CCTGAGATGCTAACACGACTCCCAGATATAATCCCAGTCTCCTCTTTCTTATTACTGAAGCTCTTGGACTaGTCGGAGCTCTTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: PEMLTRLPDIIPVSSFLLLKLLD*SELFGE
Trigger: CTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAG...TAATAAGAAAGAGGAGACTGGGATTATATCTGGGAGTCGTGTTAGCATCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp AGTCTCCGTAGCTGCTCCCAGTTGCTGGGAAAAGTTTGCTTCGGAGAAGGCAGGTCCTCATGGTATCCCTaGAAATATTTTGATCCCTTA +
Preference number: 5 (lower is better)
Translates to: SLRSCSQLLGKVCFGEGRSSWYP*KYFDPL
Trigger: TAAGGGATCAAAATATTTCAAGGGATACCATGAGGA...CCTGCCTTCTCCGAAGCAAACTTTTCCCAGCAACTGGGAGCAGCTACGGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TCTCACTCCTGGGTGCAGCTGGTTACTGGAAACGTCACCTACCTTTGTGATGTTAGTACAATGATAAGCTaGCTTCTGGCTCACCCTAAT +
Preference number: 5 (lower is better)
Translates to: SHSWVQLVTGNVTYLCDVSTMIS*LLAHPN
Trigger: ATTAGGGTGAGCCAGAAGCAAGCTTATCATTGTACT...AACATCACAAAGGTAGGTGACGTTTCCAGTAACCAGCTGCACCCAGGAGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTTCTATGCTGAAGCTCTaGGACTTGTCGGAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFSMLKL*DLSELF
Trigger: GAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGA...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TGGCTAATGAGCTATCGTAATGCAAGAAGATGTTATATAGAGTGCACTTTCTTAAGCATCAGGGAAGCGTaGAAAGGCGGACGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WLMSYRNARRCYIECTFLSIREA*KGGRRL
Trigger: CAGCCTCCGTCCGCCTTTCAACGCTTCCCTGATGCT...TAAGAAAGTGCACTCTATATAACATCTTCTTGCATTACGATAGCTCATTAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGTGGCATAGAGGTCGGTaGCATTTCCCCGGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVWHRGR*HFPGSC
Trigger: GCAGCTTCCGGGGAAATGCAACCGACCTCTATGCCA...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp CCTTTCCAACACATTGACCAACAGGCCCTCTGGATTCAAAGTTTGTCATCATTTGAACCGTGCCATTGTTaGCTTTACTGGAAGTGGAGT +
Preference number: 5 (lower is better)
Translates to: PFQHIDQQALWIQSLSSFEPCHC*LYWKWS
Trigger: ACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTC...AAATGATGACAAACTTTGAATCCAGAGGGCCTGTTGGTCAATGTGTTGGAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp TTACTGGAAACGTCACCTACCTTTGTGATGTTAACATTAACCTGCCAGGGTCTGAGCTGCAAGCTGAACTaGGTTGTGAACATCTCAATG +
Preference number: 5 (lower is better)
Translates to: LLETSPTFVMLTLTCQGLSCKLN*VVNISM
Trigger: CATTGAGATGTTCACAACCAAGTTCAGCTTGCAGCT...CAGACCCTGGCAGGTTAATGTTAACATCACAAAGGTAGGTGACGTTTCCAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGGGCCCAGGAGGCCGTTaGTTTCTAGAAAAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVGPGGR*FLEKPA
Trigger: TGCTGGCTTTTCTAGAAACAAACGGCCTCCTGGGCC...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS-3UTR CAA 90 bp AACTATTTTAAAAGCGATCTTAAAGACCTCCCTCCCAACCTATTTCCAATAGTGATAGTGCGTGACTACTaGTGTCTTTATCACATGACA +
Preference number: 5 (lower is better)
Translates to: NYFKSDLKDLPPNLFPIVIVRDY*CLYHMT
Trigger: TGTCATGTGATAAAGACACAAGTAGTCACGCACTAT...CACTATTGGAAATAGGTTGGGAGGGAGGTCTTTAAGATCGCTTTTAAAATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 72 bp CGCGCTGCCTGGCCGACCGCCACGGCCGCTGCGCCCTaGGCAGCGTCACCAGCGTCCTCGTTCGGGGACGCG +
Preference number: 6 (lower is better)
Translates to: RAAWPTATAAAP*AASPASSFGDA
Trigger: CGCGTCCCCGAACGAGGACGCTGGTGACGCTGCCCAGGGCGCAGCGGCCGTGGCGGTCGGCCAGGCAGCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 90 bp GAGGCGGCCAGGAGCGAGGCACCCAGACGGCCGCCGGGCCCAGGCTaGGCACCCCCTAGGAGTTCGTCCCCTGAAGGCGGCTTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: EAARSEAPRRPPGPG*APPRSSSPEGGFWP
Trigger: GGGCCAGAAGCCGCCTTCAGGGGACGAACTCCTAGGGGGTGCCAAGCCTGGGCCCGGCGGCCGTCTGGGTGCCTCGCTCCTGGCCGCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 72 bp AGGAGCGAGGCACCCAGACGGCCGCCGGGCCCAGGCTaGGCACCCCCTAGGAGTTCGTCCCCTGAAGGCGGC +
Preference number: 6 (lower is better)
Translates to: RSEAPRRPPGPG*APPRSSSPEGG
Trigger: GCCGCCTTCAGGGGACGAACTCCTAGGGGGTGCCAAGCCTGGGCCCGGCGGCCGTCTGGGTGCCTCGCTCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS GCA 72 bp GGGGATCGAAGAGGTGACTCATGGCAAGCGAGAGCCTaGGCTGCGCTCCCCGCAACGCAGGAGACCCGGGCG +
Preference number: 6 (lower is better)
Translates to: GDRRGDSWQARA*AALPATQETRA
Trigger: CGCCCGGGTCTCCTGCGTTGCGGGGAGCGCAGCGCAGGCTCTCGCTTGCCATGAGTCACCTCTTCGATCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320241.5
ENST00000593625.1
CDS CCA 72 bp CCAGGGCAGGCAGCCGGGGATCGAAGAGGTGACTCATaGCAAGCGAGAGCCTGCGCTGCGCTCCCCGCAACG +
Preference number: 6 (lower is better)
Translates to: PGQAAGDRRGDS*QARACAALPAT
Trigger: CGTTGCGGGGAGCGCAGCGCAGGCTCTCGCTTGCCATGAGTCACCTCTTCGATCCCCGGCTGCCTGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320241.5
ENST00000593625.1
CDS CAA 90 bp CCCTGCTTTCCCGCCAGGATGCTGTCTATGCTGAAGCTCTTGGACTaGTCGGAGCTCTTCGGAGAGCTGCGGGAGGCGGGGCGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: PCFPARMLSMLKLLD*SELFGELREAGRRG
Trigger: CCCTCTGCGCCCCGCCTCCCGCAGCTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 72 bp GCACCCCCTAGGAGTTCGTCCCCTGAAGGCGGCTTCTaGCCCTGCTTTCCCGCCAGGATGCTGTCTATGCTG +
Preference number: 6 (lower is better)
Translates to: APPRSSSPEGGF*PCFPARMLSML
Trigger: CAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGAAGCCGCCTTCAGGGGACGAACTCCTAGGGGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 72 bp CCCGCCAGGATGCTGTCTATGCTGAAGCTCTTGGACTaGTCGGAGCTCTTCGGAGAGCTGCGGGAGGCGGGG +
Preference number: 6 (lower is better)
Translates to: PARMLSMLKLLD*SELFGELREAG
Trigger: CCCCGCCTCCCGCAGCTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 90 bp TTCTGGCCCTGCTTTCCCGCCAGGATGCTGTCTATGCTGAAGCTCTaGGACTTGTCGGAGCTCTTCGGAGAGCTGCGGGAGGCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: FWPCFPARMLSMLKL*DLSELFGELREAGR
Trigger: GCGCCCCGCCTCCCGCAGCTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 90 bp TCAGCGGAGGCTCAGGCTGGGCCGGGAGAAGAACCGTGCCATTGTTaGCTTTACTGGAAGTGGAGTACCGTGTCGGGAACCTGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SAEAQAGPGEEPCHC*LYWKWSTVSGTCRG
Trigger: CCCCCTGCAGGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS GCA 72 bp CCTAGGAGTTCGTCCCCTGAAGGCGGCTTCTGGCCCTaGTTTCCCGCCAGGATGCTGTCTATGCTGAAGCTC +
Preference number: 6 (lower is better)
Translates to: PRSSSPEGGFWP*FPARMLSMLKL
Trigger: GAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGAAGCCGCCTTCAGGGGACGAACTCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 72 bp GGGAGCTGTGGCCTTTCGCTCAGCGGAGGCTCAGGCTaGGCCGGGAGAAGAACCGTGCCATTGTTTGCTTTA +
Preference number: 6 (lower is better)
Translates to: GSCGLSLSGGSG*AGRRTVPLFAL
Trigger: TAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGAAAGGCCACAGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 90 bp TCGCTCAGCGGAGGCTCAGGCTGGGCCGGGAGAAGAACCGTGCCATaGTTTGCTTTACTGGAAGTGGAGTACCGTGTCGGGAACCTGCAG +
Preference number: 6 (lower is better)
Translates to: SLSGGSGWAGRRTVP*FALLEVEYRVGNLQ
Trigger: CTGCAGGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCCGCTGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CCA 72 bp GGGCCGGGAGAAGAACCGTGCCATTGTTTGCTTTACTaGAAGTGGAGTACCGTGTCGGGAACCTGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: GPGEEPCHCLLY*KWSTVSGTCRG
Trigger: CCCCCTGCAGGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 72 bp GGAGGCTCAGGCTGGGCCGGGAGAAGAACCGTGCCATaGTTTGCTTTACTGGAAGTGGAGTACCGTGTCGGG +
Preference number: 6 (lower is better)
Translates to: GGSGWAGRRTVP*FALLEVEYRVG
Trigger: CCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS TCA 72 bp TCTGGCCCTGCTTTCCCGCCAGGATGCTGTCTATGCTaGAGCTCTTGGACTTGTCGGAGCTCTTCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: SGPAFPPGCCLC*SSWTCRSSSES
Trigger: GCTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCAGGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 72 bp TGCTTTCCCGCCAGGATGCTGTCTATGCTGAAGCTCTaGGACTTGTCGGAGCTCTTCGGAGAGCTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: CFPARMLSMLKL*DLSELFGELRE
Trigger: CTCCCGCAGCTCTCCGAAGAGCTCCGACAAGTCCAAGAGCTTCAGCATAGACAGCATCCTGGCGGGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS CAA 72 bp GCTCAGGCTGGGCCGGGAGAAGAACCGTGCCATTGTTaGCTTTACTGGAAGTGGAGTACCGTGTCGGGAACC +
Preference number: 6 (lower is better)
Translates to: AQAGPGEEPCHC*LYWKWSTVSGT
Trigger: GGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5
CDS GCA 72 bp CTCAGGCTGGGCCGGGAGAAGAACCGTGCCATTGTTTaGTTTACTGGAAGTGGAGTACCGTGTCGGGAACCT +
Preference number: 6 (lower is better)
Translates to: LRLGREKNRAIV*FTGSGVPCREP
Trigger: AGGTTCCCGACACGGTACTCCACTTCCAGTAAAGCAAACAATGGCACGGTTCTTCTCCCGGCCCAGCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320241.5